ncbi-blast+ →
2.7.1-1+b3 →
armhf → 2018-10-10 14:15:38
sbuild (Debian sbuild) 0.72.0 (25 Oct 2016) on mb-lxc-01
+==============================================================================+
| ncbi-blast+ 2.7.1-1+b3 (armhf) Wed, 10 Oct 2018 13:02:23 +0000 |
+==============================================================================+
Package: ncbi-blast+
Version: 2.7.1-1+b3
Source Version: 2.7.1-1
Distribution: buster-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/buster-staging-armhf-sbuild-1001054d-a0bf-4812-a544-bd81beeffa9f' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private buster-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private buster-staging/main Sources [11.1 MB]
Get:3 http://172.17.0.1/private buster-staging/main armhf Packages [12.8 MB]
Fetched 23.9 MB in 15s (1573 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'ncbi-blast+' packaging is maintained in the 'Git' version control system at:
https://anonscm.debian.org/git/debian-med/ncbi-blast+.git
Please use:
git clone https://anonscm.debian.org/git/debian-med/ncbi-blast+.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 23.7 MB of source archives.
Get:1 http://172.17.0.1/private buster-staging/main ncbi-blast+ 2.7.1-1 (dsc) [2305 B]
Get:2 http://172.17.0.1/private buster-staging/main ncbi-blast+ 2.7.1-1 (tar) [23.7 MB]
Get:3 http://172.17.0.1/private buster-staging/main ncbi-blast+ 2.7.1-1 (diff) [21.2 kB]
Fetched 23.7 MB in 11s (2147 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/ncbi-blast+-T8rny7' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/build/ncbi-blast+-T8rny7/resolver-deuXd0/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/build/ncbi-blast+-T8rny7/resolver-deuXd0/gpg/pubring.kbx' created
gpg: /build/ncbi-blast+-T8rny7/resolver-deuXd0/gpg/trustdb.gpg: trustdb created
gpg: key 37145E60F90AF620: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 37145E60F90AF620: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 37145E60F90AF620: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/build/ncbi-blast+-T8rny7/resolver-deuXd0/apt_archive ./ InRelease
Get:2 copy:/build/ncbi-blast+-T8rny7/resolver-deuXd0/apt_archive ./ Release [957 B]
Get:3 copy:/build/ncbi-blast+-T8rny7/resolver-deuXd0/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/build/ncbi-blast+-T8rny7/resolver-deuXd0/apt_archive ./ Sources [349 B]
Get:5 copy:/build/ncbi-blast+-T8rny7/resolver-deuXd0/apt_archive ./ Packages [432 B]
Fetched 2108 B in 0s (11.1 kB/s)
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W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
ca-certificates dbus dbus-user-session e2fsprogs-l10n libexpat1
libnss-systemd libpam-systemd libsasl2-modules libssl1.1 openssl
systemd-sysv
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 81 not upgraded.
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After this operation, 0 B of additional disk space will be used.
Get:1 copy:/build/ncbi-blast+-T8rny7/resolver-deuXd0/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [848 B]
debconf: delaying package configuration, since apt-utils is not installed
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(Reading database ... 15689 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any all)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: autotools-dev, debhelper (>= 9), libboost-test-dev, libbz2-dev, libc-dev-bin, libgnutls28-dev, libmbedtls-dev, libpcre3-dev, time, zlib1g-dev
Filtered Build-Depends: autotools-dev, debhelper (>= 9), libboost-test-dev, libbz2-dev, libc-dev-bin, libgnutls28-dev, libmbedtls-dev, libpcre3-dev, time, zlib1g-dev
dpkg-deb: building package 'sbuild-build-depends-ncbi-blast+-dummy' in '/build/ncbi-blast+-T8rny7/resolver-deuXd0/apt_archive/sbuild-build-depends-ncbi-blast+-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-ncbi-blast+-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/build/ncbi-blast+-T8rny7/resolver-deuXd0/apt_archive ./ InRelease
Get:2 copy:/build/ncbi-blast+-T8rny7/resolver-deuXd0/apt_archive ./ Release [963 B]
Get:3 copy:/build/ncbi-blast+-T8rny7/resolver-deuXd0/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/build/ncbi-blast+-T8rny7/resolver-deuXd0/apt_archive ./ Sources [551 B]
Get:5 copy:/build/ncbi-blast+-T8rny7/resolver-deuXd0/apt_archive ./ Packages [635 B]
Fetched 2519 B in 0s (12.7 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install ncbi-blast+ build dependencies (apt-based resolver)
-----------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
ca-certificates dbus dbus-user-session e2fsprogs-l10n libexpat1
libnss-systemd libpam-systemd libsasl2-modules libssl1.1 openssl
systemd-sysv
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils bzip2 debhelper
dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base
groff-base intltool-debian libarchive-zip-perl libboost-chrono1.62.0
libboost-system1.62.0 libboost-test-dev libboost-test1.62-dev
libboost-test1.62.0 libboost-timer1.62.0 libboost1.62-dev libbsd0 libbz2-1.0
libbz2-dev libcroco3 libelf1 libevent-2.1-6 libfile-stripnondeterminism-perl
libfreetype6 libglib2.0-0 libgmp-dev libgmpxx4ldbl libgnutls-dane0
libgnutls-openssl27 libgnutls28-dev libgnutlsxx28 libgraphite2-3
libharfbuzz0b libicu-le-hb0 libicu60 libidn2-0 libidn2-0-dev libidn2-dev
libmagic-mgc libmagic1 libmbedcrypto3 libmbedtls-dev libmbedtls12
libmbedx509-0 libp11-kit-dev libp11-kit0 libpcre16-3 libpcre3 libpcre3-dev
libpcre32-3 libpcrecpp0v5 libpipeline1 libsigsegv2 libtasn1-6-dev libtool
libunbound2 libxml2 m4 man-db nettle-dev po-debconf time zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
vacation bzip2-doc dh-make gettext-doc libasprintf-dev libgettextpo-dev
groff libboost1.62-doc libboost-atomic1.62-dev libboost-chrono1.62-dev
libboost-context1.62-dev libboost-coroutine1.62-dev
libboost-date-time1.62-dev libboost-exception1.62-dev libboost-fiber1.62-dev
libboost-filesystem1.62-dev libboost-graph1.62-dev
libboost-graph-parallel1.62-dev libboost-iostreams1.62-dev
libboost-locale1.62-dev libboost-log1.62-dev libboost-math1.62-dev
libboost-mpi1.62-dev libboost-mpi-python1.62-dev
libboost-program-options1.62-dev libboost-python1.62-dev
libboost-random1.62-dev libboost-regex1.62-dev
libboost-serialization1.62-dev libboost-signals1.62-dev
libboost-system1.62-dev libboost-thread1.62-dev libboost-timer1.62-dev
libboost-type-erasure1.62-dev libboost-wave1.62-dev libboost1.62-tools-dev
libmpfrc++-dev libntl-dev gmp-doc libgmp10-doc libmpfr-dev dns-root-data
gnutls-doc gnutls-bin libmbedtls-doc libtool-doc gfortran
| fortran95-compiler gcj-jdk m4-doc apparmor less www-browser
libmail-box-perl
Recommended packages:
curl | wget | lynx bzip2-doc libarchive-cpio-perl libglib2.0-data
shared-mime-info xdg-user-dirs libtasn1-doc libltdl-dev
libmail-sendmail-perl
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils debhelper
dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base
groff-base intltool-debian libarchive-zip-perl libboost-chrono1.62.0
libboost-system1.62.0 libboost-test-dev libboost-test1.62-dev
libboost-test1.62.0 libboost-timer1.62.0 libboost1.62-dev libbsd0 libbz2-dev
libcroco3 libelf1 libevent-2.1-6 libfile-stripnondeterminism-perl
libfreetype6 libglib2.0-0 libgmp-dev libgmpxx4ldbl libgnutls-dane0
libgnutls-openssl27 libgnutls28-dev libgnutlsxx28 libgraphite2-3
libharfbuzz0b libicu-le-hb0 libicu60 libidn2-0-dev libidn2-dev libmagic-mgc
libmagic1 libmbedcrypto3 libmbedtls-dev libmbedtls12 libmbedx509-0
libp11-kit-dev libpcre16-3 libpcre3-dev libpcre32-3 libpcrecpp0v5
libpipeline1 libsigsegv2 libtasn1-6-dev libtool libunbound2 libxml2 m4
man-db nettle-dev po-debconf sbuild-build-depends-ncbi-blast+-dummy time
zlib1g-dev
The following packages will be upgraded:
bzip2 libbz2-1.0 libidn2-0 libp11-kit0 libpcre3
5 upgraded, 66 newly installed, 0 to remove and 76 not upgraded.
Need to get 24.6 MB/33.6 MB of archives.
After this operation, 205 MB of additional disk space will be used.
Get:1 copy:/build/ncbi-blast+-T8rny7/resolver-deuXd0/apt_archive ./ sbuild-build-depends-ncbi-blast+-dummy 0.invalid.0 [924 B]
Get:2 http://172.17.0.1/private buster-staging/main armhf libbsd0 armhf 0.9.1-1 [104 kB]
Get:3 http://172.17.0.1/private buster-staging/main armhf bsdmainutils armhf 11.1.2 [182 kB]
Get:4 http://172.17.0.1/private buster-staging/main armhf groff-base armhf 1.22.3-10 [1005 kB]
Get:5 http://172.17.0.1/private buster-staging/main armhf libpipeline1 armhf 1.5.0-1 [24.6 kB]
Get:6 http://172.17.0.1/private buster-staging/main armhf man-db armhf 2.8.4-2 [1161 kB]
Get:7 http://172.17.0.1/private buster-staging/main armhf bzip2 armhf 1.0.6-9 [46.1 kB]
Get:8 http://172.17.0.1/private buster-staging/main armhf libbz2-1.0 armhf 1.0.6-9 [43.0 kB]
Get:9 http://172.17.0.1/private buster-staging/main armhf libpcre3 armhf 2:8.39-11+rpi1 [313 kB]
Get:10 http://172.17.0.1/private buster-staging/main armhf libidn2-0 armhf 2.0.5-1 [73.7 kB]
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Get:14 http://172.17.0.1/private buster-staging/main armhf file armhf 1:5.34-2 [65.0 kB]
Get:15 http://172.17.0.1/private buster-staging/main armhf gettext-base armhf 0.19.8.1-7 [117 kB]
Get:16 http://172.17.0.1/private buster-staging/main armhf libevent-2.1-6 armhf 2.1.8-stable-4 [156 kB]
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Get:18 http://172.17.0.1/private buster-staging/main armhf time armhf 1.7-25.1 [30.8 kB]
Get:19 http://172.17.0.1/private buster-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:20 http://172.17.0.1/private buster-staging/main armhf m4 armhf 1.4.18-1 [185 kB]
Get:21 http://172.17.0.1/private buster-staging/main armhf autoconf all 2.69-11 [341 kB]
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Get:35 http://172.17.0.1/private buster-staging/main armhf gettext armhf 0.19.8.1-7 [1218 kB]
Get:36 http://172.17.0.1/private buster-staging/main armhf intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:37 http://172.17.0.1/private buster-staging/main armhf po-debconf all 1.0.20 [247 kB]
Get:38 http://172.17.0.1/private buster-staging/main armhf debhelper all 11.4.1 [989 kB]
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Get:49 http://172.17.0.1/private buster-staging/main armhf libunbound2 armhf 1.7.3-1 [381 kB]
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Get:52 http://172.17.0.1/private buster-staging/main armhf nettle-dev armhf 3.4-1 [1077 kB]
Get:53 http://172.17.0.1/private buster-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-1 [206 kB]
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Get:58 http://172.17.0.1/private buster-staging/main armhf libgnutls28-dev armhf 3.5.19-1 [770 kB]
Get:59 http://172.17.0.1/private buster-staging/main armhf libmbedcrypto3 armhf 2.13.0-3 [181 kB]
Get:60 http://172.17.0.1/private buster-staging/main armhf libmbedx509-0 armhf 2.13.0-3 [82.1 kB]
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W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.4.0-124-generic armhf (armv8l)
Toolchain package versions: binutils_2.31.1-2+rpi1 dpkg-dev_1.19.0.5 g++-8_8.1.0-12+rpi1 gcc-8_8.1.0-12+rpi1 libc6-dev_2.27-5+rpi1 libstdc++-8-dev_8.1.0-12+rpi1 libstdc++6_8.1.0-12+rpi1 linux-libc-dev_4.16.16-2+rpi1
Package versions: adduser_3.117 apt_1.6.3 autoconf_2.69-11 automake_1:1.16.1-1.1 autopoint_0.19.8.1-7 autotools-dev_20180224.1 base-files_10.1+rpi1 base-passwd_3.5.45 bash_4.4.18-3.1 binutils_2.31.1-2+rpi1 binutils-arm-linux-gnueabihf_2.31.1-2+rpi1 binutils-common_2.31.1-2+rpi1 bsdmainutils_11.1.2 bsdutils_1:2.32.1-0.1 build-essential_12.5 bzip2_1.0.6-9 ca-certificates_20170717 coreutils_8.28-1 cpio_2.12+dfsg-6 cpp_4:8.1.0-1+rpi1 cpp-8_8.1.0-12+rpi1 dash_0.5.8-2.10 dbus_1.12.10-1 dbus-user-session_1.12.10-1 debconf_1.5.69 debhelper_11.4.1 debianutils_4.8.6 dh-autoreconf_19 dh-strip-nondeterminism_0.043-1 diffutils_1:3.6-1 dirmngr_2.2.9-1+rpi1 dmsetup_2:1.02.145-4.1+b4 dpkg_1.19.0.5 dpkg-dev_1.19.0.5 dwz_0.12-2 e2fslibs_1.44.3-1 e2fsprogs_1.44.3-1 e2fsprogs-l10n_1.44.3-1 fakeroot_1.23-1 fdisk_2.32.1-0.1 file_1:5.34-2 findutils_4.6.0+git+20171230-2 g++_4:8.1.0-1+rpi1 g++-8_8.1.0-12+rpi1 gcc_4:8.1.0-1+rpi1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-4 gcc-4.9-base_4.9.4-2+rpi1+b19 gcc-5-base_5.5.0-8 gcc-8_8.1.0-12+rpi1 gcc-8-base_8.1.0-12+rpi1 gettext_0.19.8.1-7 gettext-base_0.19.8.1-7 gnupg_2.2.9-1+rpi1 gnupg-agent_2.2.9-1+rpi1 gnupg-l10n_2.2.9-1+rpi1 gnupg-utils_2.2.9-1+rpi1 gpg_2.2.9-1+rpi1 gpg-agent_2.2.9-1+rpi1 gpg-wks-client_2.2.9-1+rpi1 gpg-wks-server_2.2.9-1+rpi1 gpgconf_2.2.9-1+rpi1 gpgsm_2.2.9-1+rpi1 gpgv_2.2.9-1+rpi1 grep_3.1-2 groff-base_1.22.3-10 gzip_1.9-2 hostname_3.20 inetutils-ping_2:1.9.4-3 init-system-helpers_1.51 initramfs-tools_0.132 initramfs-tools-core_0.132 intltool-debian_0.35.0+20060710.4 klibc-utils_2.0.4-14+rpi1 kmod_25-1 libacl1_2.2.52-3 libapparmor1_2.13-8 libapt-pkg5.0_1.6.3 libarchive-zip-perl_1.64-1 libargon2-1_0~20171227-0.1 libasan5_8.1.0-12+rpi1 libassuan0_2.5.1-2 libatomic1_8.1.0-12+rpi1 libattr1_1:2.4.47-2 libaudit-common_1:2.8.3-1 libaudit1_1:2.8.3-1 libbinutils_2.31.1-2+rpi1 libblkid1_2.32.1-0.1 libboost-chrono1.62.0_1.62.0+dfsg-10 libboost-system1.62.0_1.62.0+dfsg-10 libboost-test-dev_1.62.0.1+b8 libboost-test1.62-dev_1.62.0+dfsg-10 libboost-test1.62.0_1.62.0+dfsg-10 libboost-timer1.62.0_1.62.0+dfsg-10 libboost1.62-dev_1.62.0+dfsg-10 libbsd0_0.9.1-1 libbz2-1.0_1.0.6-9 libbz2-dev_1.0.6-9 libc-bin_2.27-5+rpi1 libc-dev-bin_2.27-5+rpi1 libc6_2.27-5+rpi1 libc6-dev_2.27-5+rpi1 libcap-ng0_0.7.9-1 libcap2_1:2.25-1.2 libcc1-0_8.1.0-12+rpi1 libcom-err2_1.44.3-1 libcroco3_0.6.12-2 libcryptsetup12_2:2.0.4-2 libcryptsetup4_2:1.7.5-1 libdb5.3_5.3.28-13.1 libdbus-1-3_1.12.10-1 libdebconfclient0_0.244 libdevmapper1.02.1_2:1.02.145-4.1+b4 libdpkg-perl_1.19.0.5 libdrm-common_2.4.92-1+rpi1 libdrm2_2.4.92-1+rpi1 libelf1_0.170-0.5 libevent-2.1-6_2.1.8-stable-4 libexpat1_2.2.5-3 libext2fs2_1.44.3-1 libfakeroot_1.23-1 libfdisk1_2.32.1-0.1 libffi6_3.2.1-8 libfile-stripnondeterminism-perl_0.043-1 libfreetype6_2.8.1-2 libgcc-8-dev_8.1.0-12+rpi1 libgcc1_1:8.1.0-12+rpi1 libgcrypt20_1.8.3-1 libgdbm-compat4_1.14.1-6 libgdbm3_1.8.3-14 libgdbm5_1.14.1-6 libglib2.0-0_2.58.1-2 libgmp-dev_2:6.1.2+dfsg-3 libgmp10_2:6.1.2+dfsg-3 libgmpxx4ldbl_2:6.1.2+dfsg-3 libgnutls-dane0_3.5.19-1 libgnutls-openssl27_3.5.19-1 libgnutls28-dev_3.5.19-1 libgnutls30_3.5.19-1 libgnutlsxx28_3.5.19-1 libgomp1_8.1.0-12+rpi1 libgpg-error0_1.32-1 libgraphite2-3_1.3.12-1 libharfbuzz0b_1.9.0-1+rpi1 libhogweed4_3.4-1 libicu-le-hb0_1.0.3+git161113-5 libicu60_60.2-6 libidn11_1.33-2.2 libidn2-0_2.0.5-1 libidn2-0-dev_2.0.5-1 libidn2-dev_2.0.5-1 libip4tc0_1.6.2-1.1 libisl19_0.20-1 libjson-c3_0.12.1-1.3 libklibc_2.0.4-14+rpi1 libkmod2_25-1 libksba8_1.3.5-2 libldap-2.4-2_2.4.46+dfsg-5+rpi1 libldap-common_2.4.46+dfsg-5+rpi1 liblz4-1_1.8.2-1+rpi1 liblzma5_5.2.2-1.3 libmagic-mgc_1:5.34-2 libmagic1_1:5.34-2 libmbedcrypto3_2.13.0-3 libmbedtls-dev_2.13.0-3 libmbedtls12_2.13.0-3 libmbedx509-0_2.13.0-3 libmount1_2.32.1-0.1 libmpc3_1.1.0-1 libmpfr6_4.0.1-1 libncurses5_6.1+20180714-1 libncurses6_6.1+20180714-1 libncursesw5_6.1+20180714-1 libncursesw6_6.1+20180714-1 libnettle6_3.4-1 libnpth0_1.6-1 libnss-systemd_239-7 libp11-kit-dev_0.23.14-2 libp11-kit0_0.23.14-2 libpam-modules_1.1.8-3.7 libpam-modules-bin_1.1.8-3.7 libpam-runtime_1.1.8-3.7 libpam-systemd_239-7 libpam0g_1.1.8-3.7 libpcre16-3_2:8.39-11+rpi1 libpcre3_2:8.39-11+rpi1 libpcre3-dev_2:8.39-11+rpi1 libpcre32-3_2:8.39-11+rpi1 libpcrecpp0v5_2:8.39-11+rpi1 libperl5.24_5.24.1-7 libperl5.26_5.26.2-7 libpipeline1_1.5.0-1 libplymouth4_0.9.3-3 libpng16-16_1.6.34-2+rpi1 libprocps7_2:3.3.15-2 libreadline7_7.0-5 libsasl2-2_2.1.27~101-g0780600+dfsg-3.1 libsasl2-modules_2.1.27~101-g0780600+dfsg-3.1 libsasl2-modules-db_2.1.27~101-g0780600+dfsg-3.1 libseccomp2_2.3.3-3 libselinux1_2.8-1 libsemanage-common_2.8-1 libsemanage1_2.8-1 libsepol1_2.8-1 libsigsegv2_2.12-2 libsmartcols1_2.32.1-0.1 libsqlite3-0_3.24.0-1 libss2_1.44.3-1 libssl1.1_1.1.0h-4 libstdc++-8-dev_8.1.0-12+rpi1 libstdc++6_8.1.0-12+rpi1 libsystemd0_239-7 libtasn1-6_4.13-3 libtasn1-6-dev_4.13-3 libtinfo5_6.1+20180714-1 libtinfo6_6.1+20180714-1 libtool_2.4.6-4 libubsan1_8.1.0-12+rpi1 libudev1_239-7 libunbound2_1.7.3-1 libunistring2_0.9.10-1 libustr-1.0-1_1.0.4-6 libuuid1_2.32.1-0.1 libxml2_2.9.4+dfsg1-7 libzstd1_1.3.4+dfsg-3+rpi1 linux-base_4.5 linux-libc-dev_4.16.16-2+rpi1 login_1:4.5-1.1 lsb-base_9.20170808+rpi1 m4_1.4.18-1 make_4.2.1-1.2 makedev_2.3.1-93 man-db_2.8.4-2 mawk_1.3.3-17 mount_2.32.1-0.1 multiarch-support_2.27-5+rpi1 nano_2.9.8-1 ncurses-base_6.1+20180714-1 ncurses-bin_6.1+20180714-1 netbase_5.4 nettle-dev_3.4-1 openssl_1.1.0h-4 passwd_1:4.5-1.1 patch_2.7.6-3 perl_5.26.2-7 perl-base_5.26.2-7 perl-modules-5.24_5.24.1-7 perl-modules-5.26_5.26.2-7 pinentry-curses_1.1.0-1 plymouth_0.9.3-3 po-debconf_1.0.20 procps_2:3.3.15-2 raspbian-archive-keyring_20120528.2 readline-common_7.0-5 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-ncbi-blast+-dummy_0.invalid.0 sed_4.5-1 sensible-utils_0.0.12 systemd_239-7 systemd-sysv_239-7 sysvinit-utils_2.88dsf-59.10 tar_1.30+dfsg-2 time_1.7-25.1 tzdata_2018e-1 udev_239-7 util-linux_2.32.1-0.1 xz-utils_5.2.2-1.3 zlib1g_1:1.2.11.dfsg-1 zlib1g-dev_1:1.2.11.dfsg-1
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Thu Feb 15 11:14:18 2018 UTC
gpgv: using RSA key 78DC68DB326D8438
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./ncbi-blast+_2.7.1-1.dsc
dpkg-source: info: extracting ncbi-blast+ in /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1
dpkg-source: info: unpacking ncbi-blast+_2.7.1.orig.tar.gz
dpkg-source: info: unpacking ncbi-blast+_2.7.1-1.debian.tar.xz
dpkg-source: info: applying enable_clean_after_failed_compile
dpkg-source: info: applying hurd_fixes
dpkg-source: info: applying legacy_rename_rpsblast
dpkg-source: info: applying fix_lib_deps
dpkg-source: info: applying no_multiarch_rpath
dpkg-source: info: applying use_pie_for_apps
dpkg-source: info: applying skip_services_unit_test
dpkg-source: info: applying fix_configure
dpkg-source: info: applying support_x32
dpkg-source: info: applying suppress_gnutls_version_check
dpkg-source: info: applying optionally_keep_sequence
dpkg-source: info: applying fix_unit_tests
dpkg-source: info: applying remove_embedded_mbedtls
Check disk space
----------------
Sufficient free space for build
Hack binNMU version
-------------------
Created changelog entry for binNMU version 2.7.1-1+b3
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=buster-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=buster-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=112
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=buster-staging-armhf-sbuild-1001054d-a0bf-4812-a544-bd81beeffa9f
SCHROOT_UID=107
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package ncbi-blast+
dpkg-buildpackage: info: source version 2.7.1-1+b3
dpkg-buildpackage: info: source distribution buster-staging
dpkg-source --before-build ncbi-blast+-2.7.1
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
# dh clean -Dc++ --with autotools_dev
dh clean -Dc++
dh_testdir -O-Dc\+\+
dh_auto_clean -O-Dc\+\+
debian/rules override_dh_clean
make[1]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1'
cp c++/configure.orig configure.orig.save
dh_clean
#Tricky - for each module directory there may be several module files
#or there may be none but then there is still a module named after the
#directory. Clean everything!
for x in c++/src/objects/* ; do \
(cd "$x" && ( \
mods="`echo *.module`" ; \
[ "${mods#*\*}" = "$mods" ] || mods="`basename $x`" ; \
for mod in $mods ; do \
../../../BUILD/build/new_module.sh $mod purge_sources ; \
done ) ; \
) ; \
done
/bin/sh: 2: cd: can't cd to c++/src/objects/CMakeLists.txt
/bin/sh: 2: cd: can't cd to c++/src/objects/Makefile.in
/bin/sh: 2: cd: can't cd to c++/src/objects/Makefile.sources
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 2: cd: can't cd to c++/src/objects/nt_sources.cmd
/bin/sh: 2: cd: can't cd to c++/src/objects/nt_sources.sh
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
make[1]: [debian/rules:108: override_dh_clean] Error 127 (ignored)
rm -rf c++/compilers/dll c++/config.log c++/Makefile
rm -f c++/configure.lineno c++/src/objects/blastxml/blastxml.module
find -name check_exec.pid -delete
rm -rf c++/BUILD
mv configure.orig.save c++/configure.orig
make[1]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1'
debian/rules build-arch
# dh build-arch -Dc++ --with autotools_dev
dh build-arch -Dc++
dh_testdir -a -O-Dc\+\+
dh_update_autotools_config -a -O-Dc\+\+
debian/rules override_dh_auto_configure
make[1]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1'
cd c++ && LD_LIBRARY_PATH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib${LD_LIBRARY_PATH+:$LD_LIBRARY_PATH} \
CONFIG_SHELL=/bin/bash ./configure --with-dll --with-mt --without-autodep --without-makefile-auto-update --with-flat-makefile --without-caution --without-dbapi --without-lzo --with-runpath=/usr/lib/ncbi-blast+ --with-build-root=BUILD --without-debug --without-downloaded-vdb --with-mbedtls --with-symbols CFLAGS_FOR_BUILD="-g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIE" LDFLAGS_FOR_BUILD="-specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed" \
|| (tail -v -n +0 config.log BUILD/status/config.log; exit 1)
configure: loading site script ./src/build-system/config.site
configure: creating cache config.cache
configure: WARNING: --with(out)-dbapi is deprecated
configure: WARNING: please simply pass an appropriate project list
checking TeamCity build number... none
checking Subversion revision... unknown
checking NCBI stable components' version... unknown
checking build system type... armv8l-unknown-linux-gnueabihf
checking host system type... armv8l-unknown-linux-gnueabihf
checking for a BSD-compatible install... /usr/bin/install -c
checking for gcc... gcc
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables...
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking how to run the C preprocessor... gcc -E
checking for gcc... gcc
checking whether we are using the GNU C compiler... (cached) yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking how to run the C preprocessor... gcc -E
checking for g++... g++
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
adjusted C compiler: /usr/bin/gcc
adjusted C++ compiler: /usr/bin/g++
checking whether /usr/bin/gcc has an option to export all symbols... -Wl,-export-dynamic
checking whether /usr/bin/gcc supports -Wl,--{en,dis}able-new-dtags... yes
checking whether /usr/bin/gcc has an option to discard unneeded shared libraries... -Wl,--as-needed
checking whether /usr/bin/gcc has an option to link in whole static archives... -Wl,--whole-archive
checking whether _LIBCPP_VERSION is declared... no
checking how to enable C++ '11 features in /usr/bin/g++ ... -std=gnu++11
checking how to enable C '11 or at least '99 features in /usr/bin/gcc ... -std=gnu11 -fgnu89-inline
checking for dpkg-architecture... /usr/bin/dpkg-architecture
checking for gawk... no
checking for mawk... mawk
checking for GNU make... /usr/bin/make
checking for /usr/bin/make... /usr/bin/make
checking whether ln -s works... yes
checking for ranlib... ranlib
checking for ar... ar cr
checking ranlib's effectiveness... neutral
checking for strip... strip
checking whether strip loses runtime type information... no
checking for ccache... no
checking for tail... /usr/bin/tail
checking whether /usr/bin/tail accepts modern syntax (-n N)... yes
checking for basename... /usr/bin/basename
checking for sed... /bin/sed
checking for touch... /bin/touch
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking how to run /bin/grep -E quietly... /bin/grep -E -q
checking for valgrind... no
checking for ldd... /usr/bin/ldd
checking whether /usr/bin/ldd accepts -r... yes
checking for uuidgen... no
checking for cd_reporter... no
checking how to run the C++ preprocessor... /usr/bin/g++ -std=gnu++11 -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for size_t... yes
checking for size_t... (cached) yes
checking size of size_t... 4
checking for amq... no
checking whether /usr/bin/gcc -std=gnu11 -fgnu89-inline supports -Wl,--no-allow-shlib-undefined... yes
checking how to run the C preprocessor... gcc -E
checking whether cross-directory hard links work... yes
checking iostream usability... yes
checking iostream presence... yes
checking for iostream... yes
checking iostream.h usability... no
checking iostream.h presence... no
checking for iostream.h... no
checking fstream usability... yes
checking fstream presence... yes
checking for fstream... yes
checking fstream.h usability... no
checking fstream.h presence... no
checking for fstream.h... no
checking strstream usability... yes
checking strstream presence... yes
checking for strstream... yes
checking strstream.h usability... no
checking strstream.h presence... no
checking for strstream.h... no
checking strstrea.h usability... no
checking strstrea.h presence... no
checking for strstrea.h... no
checking for inttypes.h... (cached) yes
checking limits usability... yes
checking limits presence... yes
checking for limits... yes
checking limits.h usability... yes
checking limits.h presence... yes
checking for limits.h... yes
checking for unistd.h... (cached) yes
checking windows.h usability... no
checking windows.h presence... no
checking for windows.h... no
checking for wstring... yes
checking for socklen_t... yes
checking atomic.h usability... no
checking atomic.h presence... no
checking for atomic.h... no
checking cpuid.h usability... no
checking cpuid.h presence... no
checking for cpuid.h... no
checking dlfcn.h usability... yes
checking dlfcn.h presence... yes
checking for dlfcn.h... yes
checking ieeefp.h usability... no
checking ieeefp.h presence... no
checking for ieeefp.h... no
checking poll.h usability... yes
checking poll.h presence... yes
checking for poll.h... yes
checking sys/epoll.h usability... yes
checking sys/epoll.h presence... yes
checking for sys/epoll.h... yes
checking sys/mount.h usability... yes
checking sys/mount.h presence... yes
checking for sys/mount.h... yes
checking sys/sockio.h usability... no
checking sys/sockio.h presence... no
checking for sys/sockio.h... no
checking sys/statvfs.h usability... yes
checking sys/statvfs.h presence... yes
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config.status: creating /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc/common/ncbi_build_ver.h
config.status: creating /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc/ncbiconf_unix.h
config.status: executing default commands
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/corelib/ncbicfg.c is updated
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc/common/ncbi_build_ver.h is updated
make[2]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/helpers'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/helpers TMPL=run_with_lock -kw all
make[3]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/helpers'
gcc -c -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIE /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/helpers/run_with_lock.c -o run_with_lock.o
gcc -Wl,-rpath,/usr/lib/ncbi-blast+ -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -fPIE -pie run_with_lock.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lm -lpthread -o run_with_lock
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f run_with_lock /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f run_with_lock /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/run_with_lock
make[3]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/helpers'
make[2]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/helpers'
Platform not defined for Linux armv8l -- please fix me
project_tree_builder is not found at /net/snowman/vol/export2/win-coremake/App/Ncbi/cppcore/ptb/UNKNOWN/4.2.1/project_tree_builder
Will build project_tree_builder locally
**********************************************************************
Building project_tree_builder
**********************************************************************
make[2]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[3]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
/usr/bin/make[4] (Makefile.precompile): Nothing to be done for `all'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
/usr/bin/make[3] (Makefile.corelib.lib): Nothing to be done for `export-headers'.
/usr/bin/make[3] (Makefile.test_mt.lib): Nothing to be done for `export-headers'.
/usr/bin/make[3] (Makefile.test_boost.lib): Nothing to be done for `export-headers'.
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib TMPL=corelib -w all
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_os_unix.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/blob_storage.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/blob_storage.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ddumpable.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ddumpable.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/env_reg.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/env_reg.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/metareg.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/metareg.cpp:35:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ncbi::CMetaRegistry::SEntry&}; _Tp = ncbi::CMetaRegistry::SEntry; _Alloc = std::allocator<ncbi::CMetaRegistry::SEntry>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<ncbi::CMetaRegistry::SEntry>::iterator' {aka '__gnu_cxx::__normal_iterator<ncbi::CMetaRegistry::SEntry*, std::vector<ncbi::CMetaRegistry::SEntry> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/metareg.cpp:35:
/usr/include/c++/8/bits/stl_vector.h: In member function 'const ncbi::CMetaRegistry::SEntry& ncbi::CMetaRegistry::x_Load(const string&, ncbi::CMetaRegistry::ENameStyle, ncbi::CMetaRegistry::TFlags, ncbi::IRegistry::TFlags, ncbi::IRWRegistry*, const string&, ncbi::CMetaRegistry::ENameStyle, ncbi::CMetaRegistry::SEntry&, const string&)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CMetaRegistry::SEntry*, std::vector<ncbi::CMetaRegistry::SEntry> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_config.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_os_unix.cpp -o ncbi_os_unix.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/blob_storage.cpp -o blob_storage.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ddumpable.cpp -o ddumpable.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/env_reg.cpp -o env_reg.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/metareg.cpp -o metareg.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_config.cpp -o ncbi_config.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MTIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_param.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_process.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_safe_static.hpp:48,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_safe_static.cpp:38:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_signal.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_signal.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_stack.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_system.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbiapp.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbiapp.cpp: In member function 'void ncbi::CNcbiApplication::x_TryMain(ncbi::EAppDiagStream, const char*, int*, bool*)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbiapp.cpp:460:20: warning: catching polymorphic type 'class ncbi::CArgHelpException' by value [-Wcatch-value=]
catch (CArgHelpException) {
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbiapp.cpp: In member function 'int ncbi::CNcbiApplication::AppMain(int, const char* const*, const char* const*, ncbi::EAppDiagStream, const char*, const string&)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbiapp.cpp:792:20: warning: catching polymorphic type 'class ncbi::CArgException' by value [-Wcatch-value=]
catch (CArgException) {
^~~~~~~~~~~~~
-D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_param.cpp -o ncbi_param.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_process.cpp -o ncbi_process.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_safe_static.cpp -o ncbi_safe_static.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_signal.cpp -o ncbi_signal.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_stack.cpp -o ncbi_stack.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_system.cpp -o ncbi_system.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbiapp.cpp -o ncbiapp.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-sIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbiargs.cpp:38:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbiargs.cpp: In member function 'bool ncbi::CArgDescriptions::x_CreateArg(const string&, const string&, bool, const string&, unsigned int, ncbi::CArgs&, bool, ncbi::CArgValue**) const':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbiargs.cpp:2917:12: warning: catching polymorphic type 'class ncbi::CArgException' by value [-Wcatch-value=]
catch (CArgException) {
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbiargs.cpp: In function 'std::__cxx11::string ncbi::s_CArgs_ReadFromConsole(const string&, ncbi::EEchoInput, const char*)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbiargs.cpp:2058:18: warning: ignoring return value of 'ssize_t write(int, const void*, size_t)', declared with attribute warn_unused_result [-Wunused-result]
write( tty, prompt.data(), prompt.length());
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbiargs.cpp:2087:18: warning: ignoring return value of 'ssize_t write(int, const void*, size_t)', declared with attribute warn_unused_result [-Wunused-result]
write( tty, thx.data(), thx.length());
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbiatomic.cpp:45:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_safe_static.hpp:48,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbidbg.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_process.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp: In static member function 'static void ncbi::CDiagContext::sx_ThreadDataTlsCleanup(ncbi::CDiagContextThreadData*, void*)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:854:67: warning: 'ncbi::CDiagContextThreadData::TProperties* ncbi::CDiagContextThreadData::GetProperties(ncbi::CDiagContextThreadData::EGetProperties)' is deprecated [-Wdeprecated-declarations]
value->GetProperties(CDiagContextThreadData::eProp_Get); /* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:1810:34: note: declared here
NCBI_DEPRECATED TProperties* GetProperties(EGetProperties flag);
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp: In member function 'void ncbi::CDiagContext::SetProperty(const string&, const string&, ncbi::CDiagContext::EPropertyMode)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:1776:16: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=]
catch (CException) {
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:1824:49: warning: 'ncbi::CDiagContextThreadData::TProperties* ncbi::CDiagContextThreadData::GetProperties(ncbi::CDiagContextThreadData::EGetProperties)' is deprecated [-Wdeprecated-declarations]
CDiagContextThreadData::eProp_Create); /* NCBI_FAKE_WARNING */
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:984:1: note: declared here
CDiagContextThreadData::GetProperties(EGetProperties flag)
^~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp: In member function 'std::__cxx11::string ncbi::CDiagContext::GetProperty(const string&, ncbi::CDiagContext::EPropertyMode) const':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:1887:46: warning: 'ncbi::CDiagContextThreadData::TProperties* ncbi::CDiagContextThreadData::GetProperties(ncbi::CDiagContextThreadData::EGetProperties)' is deprecated [-Wdeprecated-declarations]
CDiagContextThreadData::eProp_Get); /* NCBI_FAKE_WARNING */
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:984:1: note: declared here
CDiagContextThreadData::GetProperties(EGetProperties flag)
^~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp: In member function 'void ncbi::CDiagContext::DeleteProperty(const string&, ncbi::CDiagContext::EPropertyMode)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:1912:46: warning: 'ncbi::CDiagContextThreadData::TProperties* ncbi::CDiagContextThreadData::GetProperties(ncbi::CDiagContextThreadData::EGetProperties)' is deprecated [-Wdeprecated-declarations]
CDiagContextThreadData::eProp_Get); /* NCBI_FAKE_WARNING */
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:984:1: note: declared here
CDiagContextThreadData::GetProperties(EGetProperties flag)
^~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp: In member function 'void ncbi::CDiagContext::PrintProperties()':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:1944:46: warning: 'ncbi::CDiagContextThreadData::TProperties* ncbi::CDiagContextThreadData::GetProperties(ncbi::CDiagContextThreadData::EGetProperties)' is deprecated [-Wdeprecated-declarations]
CDiagContextThreadData::eProp_Get); /* NCBI_FAKE_WARNING */
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:984:1: note: declared here
CDiagContextThreadData::GetProperties(EGetProperties flag)
^~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp: In function 'bool ncbi::s_GetLogConfigBool(ncbi::CTempString, bool, ncbi::CNcbiRegistry*)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:3103:16: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=]
catch (CStringException) {
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp: In static member function 'static void ncbi::CDiagContext::SetupDiag(ncbi::EAppDiagStream, ncbi::CNcbiRegistry*, ncbi::EDiagCollectMessages, const char*)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:3244:48: warning: 'virtual bool ncbi::CNcbiApplication::SetupDiag_AppSpecific()' is deprecated [-Wdeprecated-declarations]
app->SetupDiag_AppSpecific(); /* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:48,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:362:34: note: declared here
NCBI_DEPRECATED virtual bool SetupDiag_AppSpecific(void);
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp: In member function 'bool ncbi::SDiagMessage::x_ParseExtraArgs(const string&, size_t)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:4235:12: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=]
catch (CStringException) {
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:4247:16: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=]
catch (CStringException) {
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp: In member function 'bool ncbi::SDiagMessage::ParseMessage(const string&)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:4334:20: warning: catching polymorphic type 'class ncbi::CTimeException' by value [-Wcatch-value=]
catch (CTimeException) {
^~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:4520:28: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=]
catch (CStringException) {
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:4606:12: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=]
catch (CException) {
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp: In member function 'virtual void ncbi::CFileHandleDiagHandler::Reopen(ncbi::CDiagHandler::TReopenFlags)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:5862:16: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=]
catch (CException) {
^~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_process.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In instantiation of 'static void ncbi::CStringPairs<TContainer>::Parse(ncbi::CStringPairs<TContainer>::TStrPairs&, ncbi::CTempString, ncbi::CTempString, ncbi::CTempString, ncbi::IStringDecoder*, EOwnership, ncbi::NStr::EMergeDelims) [with TContainer = std::__cxx11::list<std::pair<std::__cxx11::basic_string<char>, std::__cxx11::basic_string<char> > >; ncbi::CStringPairs<TContainer>::TStrPairs = std::__cxx11::list<std::pair<std::__cxx11::basic_string<char>, std::__cxx11::basic_string<char> > >; EOwnership = ENcbiOwnership]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:3949:9: required from 'void ncbi::CStringPairs<TContainer>::Parse(ncbi::CTempString, ncbi::NStr::EMergeDelims) [with TContainer = std::__cxx11::list<std::pair<std::__cxx11::basic_string<char>, std::__cxx11::basic_string<char> > >]'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:4233:52: required from here
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:3989:17: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=]
catch (CStringException) {
^~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag_p.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag_p.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidll.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbidll.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
trong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbiargs.cpp -o ncbiargs.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbiatomic.cpp -o ncbiatomic.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include ncbicfg.c -o ncbicfg.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbidbg.cpp -o ncbidbg.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp -o ncbidiag.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag_p.cpp -o ncbidiag_p.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbidll.cpp -o ncbidll.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbienv.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_process.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexec.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbiexec.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbiexpt.cpp:41:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbifile.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimempool.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbimempool.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbimtx.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbiobj.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbienv.cpp -o ncbienv.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbiexec.cpp -o ncbiexec.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbiexpt.cpp -o ncbiexpt.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbifile.cpp -o ncbifile.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbimempool.cpp -o ncbimempool.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbimtx.cpp -o ncbimtx.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbiobj.cpp -o ncbiobj.o
/In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbireg.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbistr.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbistre.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbithr.cpp:45:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbithr.cpp: In static member function 'static bool ncbi::CThread::IsMain()':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbithr.cpp:516:9: warning: variable 'id' set but not used [-Wunused-but-set-variable]
TID id = sx_ThreadId;
^~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbitime.cpp:32:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbitime.cpp: In member function 'bool ncbi::CTime::x_Init(const string&, const ncbi::CTimeFormat&, ncbi::CTime::EErrAction)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbitime.cpp:696:20: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=]
catch (CStringException) {
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbitime.cpp:715:20: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=]
catch (CStringException) {
^~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/obj_store.hpp:33,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/obj_store.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbireg.cpp -o ncbireg.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbistr.cpp -o ncbistr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbistre.cpp -o ncbistre.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbithr.cpp -o ncbithr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbitime.cpp -o ncbitime.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/obj_store.cpp -o obj_store.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-bIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/plugin_manager.hpp:70,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/plugin_manager.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/plugin_manager.hpp:70,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/plugin_manager_store.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/plugin_manager_store.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/stream_utils.cpp:42:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/syslog.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/syslog.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/version.cpp:516:12: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
: date(__DATE__ " " __TIME__)
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/version.cpp:516:25: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time]
: date(__DATE__ " " __TIME__)
^~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/version.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/version.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/request_ctx.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/request_ctx.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In instantiation of 'static void ncbi::CStringPairs<TContainer>::Parse(ncbi::CStringPairs<TContainer>::TStrPairs&, ncbi::CTempString, ncbi::CTempString, ncbi::CTempString, ncbi::IStringDecoder*, EOwnership, ncbi::NStr::EMergeDelims) [with TContainer = std::map<std::__cxx11::basic_string<char>, std::__cxx11::basic_string<char>, ncbi::PNocase_Generic<std::__cxx11::basic_string<char> > >; ncbi::CStringPairs<TContainer>::TStrPairs = std::map<std::__cxx11::basic_string<char>, std::__cxx11::basic_string<char>, ncbi::PNocase_Generic<std::__cxx11::basic_string<char> > >; EOwnership = ENcbiOwnership]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/request_ctx.cpp:725:43: required from here
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:3989:17: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=]
catch (CStringException) {
^~~~~
last+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/plugin_manager.cpp -o plugin_manager.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/plugin_manager_store.cpp -o plugin_manager_store.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/rwstreambuf.cpp -o rwstreambuf.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/stream_utils.cpp -o stream_utils.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/syslog.cpp -o syslog.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/version.cpp -o version.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/request_ctx.cpp -o request_ctx.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/request_control.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/expr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/expr.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/resource_info.cpp:38:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In instantiation of 'static void ncbi::CStringPairs<TContainer>::Parse(ncbi::CStringPairs<TContainer>::TStrPairs&, ncbi::CTempString, ncbi::CTempString, ncbi::CTempString, ncbi::IStringDecoder*, EOwnership, ncbi::NStr::EMergeDelims) [with TContainer = std::multimap<std::__cxx11::basic_string<char>, std::__cxx11::basic_string<char> >; ncbi::CStringPairs<TContainer>::TStrPairs = std::multimap<std::__cxx11::basic_string<char>, std::__cxx11::basic_string<char> >; EOwnership = ENcbiOwnership]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:3949:9: required from 'void ncbi::CStringPairs<TContainer>::Parse(ncbi::CTempString, ncbi::NStr::EMergeDelims) [with TContainer = std::multimap<std::__cxx11::basic_string<char>, std::__cxx11::basic_string<char> >]'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/resource_info.cpp:326:43: required from here
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:3989:17: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=]
catch (CStringException) {
^~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/interprocess_lock.cpp:32:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_autoinit.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_autoinit.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/perf_log.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/perf_log.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/request_control.cpp -o request_control.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/expr.cpp -o expr.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_strings.c -o ncbi_strings.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/resource_info.cpp -o resource_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/interprocess_lock.cpp -o interprocess_lock.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_autoinit.cpp -o ncbi_autoinit.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/perf_log.cpp -o perf_log.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/nIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_toolkit.cpp:31:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbierror.cpp:31:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_url.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_url.cpp: In member function 'void ncbi::CUrl::SetUrl(const string&, const ncbi::IUrlEncoder*)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_url.cpp:460:20: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=]
catch (CStringException) {
^~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_url.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_cookies.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_cookies.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_cookies.cpp: In member function 'bool ncbi::CHttpCookie::Validate() const':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_cookies.cpp:327:12: warning: catching polymorphic type 'class ncbi::CHttpCookieException' by value [-Wcatch-value=]
catch (CHttpCookieException) {
^~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_message.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_message.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_toolkit.cpp -o ncbi_toolkit.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbierror.cpp -o ncbierror.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_url.cpp -o ncbi_url.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_cookies.cpp -o ncbi_cookies.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/guard.cpp -o guard.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_message.cpp -o ncbi_message.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/request_status.cpp -o request_status.o
/bin/rm -f libxncbi.so .libxncbi.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxncbi.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC ncbi_os_unix.o blob_storage.o ddumpable.o env_reg.o metareg.o ncbi_config.o ncbi_param.o ncbi_process.o ncbi_safe_static.o ncbi_signal.o ncbi_stack.o ncbi_system.o ncbiapp.o ncbiargs.o ncbiatomic.o ncbicfg.o ncbidbg.o ncbidiag.o ncbidiag_p.o ncbidll.o ncbienv.o ncbiexec.o ncbiexpt.o ncbifile.o ncbimempool.o ncbimtx.o ncbiobj.o ncbireg.o ncbistr.o ncbistre.o ncbithr.o ncbitime.o obj_store.o plugin_manager.o plugin_manager_store.o rwstreambuf.o stream_utils.o syslog.o version.o request_ctx.o request_control.o expr.o ncbi_strings.o resource_info.o interprocess_lock.o ncbi_autoinit.o perf_log.o ncbi_toolkit.o ncbierror.o ncbi_url.o ncbi_cookies.o guard.o ncbi_message.o request_status.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -ldl -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxncbi.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxncbi.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libxncbi.so
/bin/ln -f .xncbi.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.xncbi.dep
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib TMPL=test_mt -w all
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_mt.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/test_mt.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/test_mt.cpp -o test_mt.o
/bin/rm -f libtest_mt.so .libtest_mt.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libtest_mt.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC test_mt.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtest_mt.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libtest_mt.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libtest_mt.so
/bin/ln -f .test_mt.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.test_mt.dep
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib TMPL=test_boost -w all
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/test_boost.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/test_boost.cpp -o test_boost.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/corelib/teamcity_messages.cpp -o teamcity_messages.o
/bin/rm -f libtest_boost.so .libtest_boost.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libtest_boost.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC test_boost.o teamcity_messages.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtest_boost.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libtest_boost.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libtest_boost.so
/bin/ln -f .test_boost.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.test_boost.dep
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[3]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[2]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[2]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util'
/usr/bin/make[2] (Makefile.util.lib): Nothing to be done for `export-headers'.
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util TMPL=util -w all
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/random_gen.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/random_gen.cpp:75:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/utf8.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/utf8.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/checksum.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/bytesrc.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/strbuffer.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/strbuffer.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/itree.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[3]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/random_gen.cpp -o random_gen.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/utf8.cpp -o utf8.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/checksum.cpp -o checksum.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/bytesrc.cpp -o bytesrc.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/strbuffer.cpp -o strbuffer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/itree.cpp -o itree.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/nIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/smalldns.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/thread_pool_old.hpp:45,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/thread_pool.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/thread_pool_old.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/ddump_viewer.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/strsearch.hpp:45,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/strsearch.cpp:38:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/logrotate.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/logrotate.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/format_guess.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/format_guess.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/string.h:494,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:45,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/format_guess.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/format_guess.cpp:33:
In function 'char* strncpy(char*, const char*, size_t)',
inlined from 'bool ncbi::CFormatGuess::TestFormatNewick(ncbi::CFormatGuess::EMode)' at /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/format_guess.cpp:1008:24:
/usr/include/arm-linux-gnueabihf/bits/string_fortified.h:106:34: warning: 'char* __builtin_strncpy(char*, const char*, unsigned int)' accessing 12 bytes at offsets 0 and [0, 16397] may overlap up to 12 bytes at offset 11 [-Wrestrict]
return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/ascii85.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/ascii85.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/smalldns.cpp -o smalldns.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/thread_pool_old.cpp -o thread_pool_old.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/ddump_viewer.cpp -o ddump_viewer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/strsearch.cpp -o strsearch.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/logrotate.cpp -o logrotate.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/format_guess.cpp -o format_guess.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/ascii85.cpp -o ascii85.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITSIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/md5.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/md5.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/file_obsolete.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/file_obsolete.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/unicode.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/unicode.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/dictionary.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/dictionary.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/static_set.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/static_map.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/dictionary_util.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/dictionary_util.cpp: In static member function 'static void ncbi::CDictionaryUtil::Stem(const string&, std::__cxx11::string*)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/dictionary_util.cpp:709:17: warning: array subscript -1 is below array bounds of 'const char [5]' [-Warray-bounds]
const char* end2 = p - 1;
^~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/dictionary_util.cpp:709:17: warning: array subscript -1 is below array bounds of 'const char [4]' [-Warray-bounds]
const char* end2 = p - 1;
^~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/dictionary_util.cpp:709:17: warning: array subscript -1 is below array bounds of 'const char [4]' [-Warray-bounds]
const char* end2 = p - 1;
^~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/dictionary_util.cpp:709:17: warning: array subscript -1 is below array bounds of 'const char [4]' [-Warray-bounds]
const char* end2 = p - 1;
^~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/dictionary_util.cpp:709:17: warning: array subscript -1 is below array bounds of 'const char [6]' [-Warray-bounds]
const char* end2 = p - 1;
^~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/dictionary_util.cpp:709:17: warning: array subscript -1 is below array bounds of 'const char [6]' [-Warray-bounds]
const char* end2 = p - 1;
^~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/dictionary_util.cpp:709:17: warning: array subscript -1 is below array bounds of 'const char [8]' [-Warray-bounds]
const char* end2 = p - 1;
^~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/dictionary_util.cpp:709:17: warning: array subscript -1 is below array bounds of 'const char [5]' [-Warray-bounds]
const char* end2 = p - 1;
^~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/dictionary_util.cpp:709:17: warning: array subscript -1 is below array bounds of 'const char [8]' [-Warray-bounds]
const char* end2 = p - 1;
^~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/thread_nonstop.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/thread_nonstop.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/sgml_entity.hpp:34,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/sgml_entity.cpp:32:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/md5.cpp -o md5.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/file_obsolete.cpp -o file_obsolete.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/unicode.cpp -o unicode.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/dictionary.cpp -o dictionary.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/dictionary_util.cpp -o dictionary_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/thread_nonstop.cpp -o thread_nonstop.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/sgml_entity.cpp -o sgml_entity.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/static_set.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/static_set.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/transmissionrw.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/mutex_pool.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/mutex_pool.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/ncbi_cache.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/ncbi_cache.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/line_reader.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/line_reader.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/ncbi_table.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/util_exception.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/static_set.cpp -o static_set.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/transmissionrw.cpp -o transmissionrw.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/miscmath.c -o miscmath.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/mutex_pool.cpp -o mutex_pool.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/ncbi_cache.cpp -o ncbi_cache.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/line_reader.cpp -o line_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/util_exception.cpp -o util_exception.o
/usr/bin/g++ -stdIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/multi_writer.cpp:32:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/itransaction.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/itransaction.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/thread_pool_old.hpp:45,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/thread_pool.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/thread_pool.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/thread_pool_old.hpp:45,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/thread_pool.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/thread_pool_ctrl.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/thread_pool_ctrl.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/scheduler.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/uttp.cpp -o uttp.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/multi_writer.cpp -o multi_writer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/itransaction.cpp -o itransaction.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/thread_pool.cpp -o thread_pool.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/thread_pool_ctrl.cpp -o thread_pool_ctrl.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/scheduler.cpp -o scheduler.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/rangelist.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/distribution.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/distribution.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/rangelist.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/rangelist.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/util_misc.hpp:33,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/util_misc.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/bits/stl_algo.h:61,
from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbictype.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistre.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_stack.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/histogram_binning.cpp:38:
/usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long int, unsigned int>*, std::vector<std::pair<long long int, unsigned int> > >; _Distance = int; _Tp = std::pair<long long int, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<ncbi::{anonymous}::CReverseSort<std::pair<long long int, unsigned int> > >]':
/usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, unsigned int>*, std::vector<std::pair<long long int, unsigned int> > >' changed in GCC 7.1
__adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
^~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbictype.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistre.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_stack.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/histogram_binning.cpp:38:
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long int, unsigned int>*, std::vector<std::pair<long long int, unsigned int> > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<ncbi::{anonymous}::CReverseSort<std::pair<long long int, unsigned int> > >]':
/usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, unsigned int>*, std::vector<std::pair<long long int, unsigned int> > >' changed in GCC 7.1
__unguarded_linear_insert(_RandomAccessIterator __last,
^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long int, unsigned int>*, std::vector<std::pair<long long int, unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<ncbi::{anonymous}::CReverseSort<std::pair<long long int, unsigned int> > >]':
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, unsigned int>*, std::vector<std::pair<long long int, unsigned int> > >' changed in GCC 7.1
__insertion_sort(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, unsigned int>*, std::vector<std::pair<long long int, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long int, unsigned int>*, std::vector<std::pair<long long int, unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<ncbi::{anonymous}::CReverseSort<std::pair<long long int, unsigned int> > >]':
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, unsigned int>*, std::vector<std::pair<long long int, unsigned int> > >' changed in GCC 7.1
__introsort_loop(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, unsigned int>*, std::vector<std::pair<long long int, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, unsigned int>*, std::vector<std::pair<long long int, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, unsigned int>*, std::vector<std::pair<long long int, unsigned int> > >' changed in GCC 7.1
std::__introsort_loop(__cut, __last, __depth_limit, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/histogram_binning.cpp:38:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ncbi::CHistogramBinning::SBin&}; _Tp = ncbi::CHistogramBinning::SBin; _Alloc = std::allocator<ncbi::CHistogramBinning::SBin>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<ncbi::CHistogramBinning::SBin>::iterator' {aka '__gnu_cxx::__normal_iterator<ncbi::CHistogramBinning::SBin*, std::vector<ncbi::CHistogramBinning::SBin> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long int, unsigned int>}; _Tp = std::pair<long long int, unsigned int>; _Alloc = std::allocator<std::pair<long long int, unsigned int> >]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<std::pair<long long int, unsigned int> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::pair<long long int, unsigned int>*, std::vector<std::pair<long long int, unsigned int> > >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {ncbi::CHistogramBinning::SBin}; _Tp = ncbi::CHistogramBinning::SBin; _Alloc = std::allocator<ncbi::CHistogramBinning::SBin>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<ncbi::CHistogramBinning::SBin>::iterator' {aka '__gnu_cxx::__normal_iterator<ncbi::CHistogramBinning::SBin*, std::vector<ncbi::CHistogramBinning::SBin> >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {ncbi::CHistogramBinning::SBin}; _Tp = ncbi::CHistogramBinning::SBin; _Alloc = std::allocator<ncbi::CHistogramBinning::SBin>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CHistogramBinning::SBin*, std::vector<ncbi::CHistogramBinning::SBin> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/histogram_binning.cpp:38:
/usr/include/c++/8/bits/stl_vector.h: In member function 'ncbi::CHistogramBinning::TListOfBins* ncbi::CHistogramBinning::x_TryForEvenBins() const':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CHistogramBinning::SBin*, std::vector<ncbi::CHistogramBinning::SBin> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CHistogramBinning::SBin*, std::vector<ncbi::CHistogramBinning::SBin> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/histogram_binning.cpp:38:
/usr/include/c++/8/bits/vector.tcc: In member function 'ncbi::CHistogramBinning::TListOfBins* ncbi::CHistogramBinning::x_IdentifyClusters() const':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, unsigned int>*, std::vector<std::pair<long long int, unsigned int> > >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbictype.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistre.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_stack.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/histogram_binning.cpp:38:
/usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, unsigned int>*, std::vector<std::pair<long long int, unsigned int> > >' changed in GCC 7.1
std::__introsort_loop(__first, __last,
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
std::__lg(__last - __first) * 2,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__comp);
~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, unsigned int>*, std::vector<std::pair<long long int, unsigned int> > >' changed in GCC 7.1
std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, unsigned int>*, std::vector<std::pair<long long int, unsigned int> > >' changed in GCC 7.1
std::__insertion_sort(__first, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/table_printer.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/table_printer.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_url.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_cookies.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/retry_ctx.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/stream_source.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/distribution.cpp -o distribution.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/rangelist.cpp -o rangelist.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/util_misc.cpp -o util_misc.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/histogram_binning.cpp -o histogram_binning.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/table_printer.cpp -o table_printer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/retry_ctx.cpp -o retry_ctx.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/stream_source.cpp -o stream_source.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/file_manifest.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
OURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/file_manifest.cpp -o file_manifest.o
/bin/rm -f libxutil.so .libxutil.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxutil.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC random_gen.o utf8.o checksum.o bytesrc.o strbuffer.o itree.o smalldns.o thread_pool_old.o ddump_viewer.o strsearch.o logrotate.o format_guess.o ascii85.o md5.o file_obsolete.o unicode.o dictionary.o dictionary_util.o thread_nonstop.o sgml_entity.o static_set.o transmissionrw.o miscmath.o mutex_pool.o ncbi_cache.o line_reader.o util_exception.o uttp.o multi_writer.o itransaction.o thread_pool.o thread_pool_ctrl.o scheduler.o distribution.o rangelist.o util_misc.o histogram_binning.o table_printer.o retry_ctx.o stream_source.o file_manifest.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxutil.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxutil.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libxutil.so
/bin/ln -f .xutil.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.xutil.dep
make[3]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util'
make[2]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util'
make[2]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/regexp'
NOTE: Skipping project regexp due to unmet requirements:
LocalPCRE
make[3]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/regexp'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/regexp TMPL=regexp -w mark-as-disabled
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/regexp'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/regexp'
make[3]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/regexp'
make[2]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/regexp'
make[2]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
make[3]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
/usr/bin/make[3] (Makefile.xregexp.lib): Nothing to be done for `export-headers'.
/usr/bin/make[3] (Makefile.xregexp_template_tester.lib): Nothing to be done for `export-headers'.
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/xregexp TMPL=xregexp -w all
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/xregexp/regexp.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/xregexp/regexp.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/xregexp/arg_regexp.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/xregexp/arg_regexp.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/xregexp/mask_regexp.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/xregexp/mask_regexp.cpp:31:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/xregexp/regexp.cpp -o regexp.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/xregexp/arg_regexp.cpp -o arg_regexp.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/xregexp/mask_regexp.cpp -o mask_regexp.o
/bin/rm -f libxregexp.so .libxregexp.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxregexp.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC regexp.o arg_regexp.o mask_regexp.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lxncbi -lpcre
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxregexp.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxregexp.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libxregexp.so
/bin/ln -f .xregexp.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.xregexp.dep
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/xregexp TMPL=xregexp_template_tester -w all
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/xregexp/regexp_template_tester.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/xregexp/regexp_template_tester.cpp -o regexp_template_tester.o
/bin/rm -f libxregexp_template_tester.so .libxregexp_template_tester.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxregexp_template_tester.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC regexp_template_tester.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lxregexp -lxncbi -lpcre
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxregexp_template_tester.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxregexp_template_tester.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libxregexp_template_tester.so
/bin/ln -f .xregexp_template_tester.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.xregexp_template_tester.dep
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
make[3]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
make[2]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
make[2]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/project_tree_builder'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder TMPL=project_tree_builder -w all
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_utils.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/file_contents.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/file_contents.cpp:31:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_site.hpp:31,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_configure.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_configure.cpp:31:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_makefile.hpp:31,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_makefile.cpp:32:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_item.hpp:34,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_generator.hpp:33,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_masterproject_generator.cpp:31:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_item.hpp:34,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_generator.hpp:33,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_generator.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_utils.cpp:31:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[3]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/project_tree_builder'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/file_contents.cpp -o file_contents.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_configure.cpp -o msvc_configure.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_makefile.cpp -o msvc_makefile.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_masterproject_generator.cpp -o msvc_masterproject_generator.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_generator.cpp -o msvc_prj_generator.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_utils.cpp -o msvc_prj_utils.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blaIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_item.hpp:34,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_project_context.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_project_context.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_site.hpp:31,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_site.cpp:32:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_item.hpp:34,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_project_context.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_sln_generator.hpp:34,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_sln_generator.cpp:32:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_builder_app.hpp:33,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_builder_app.cpp:31:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_datatool_generated_src.hpp:33,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_datatool_generated_src.cpp:31:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_item.cpp:31:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
st+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_project_context.cpp -o msvc_project_context.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_site.cpp -o msvc_site.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_sln_generator.cpp -o msvc_sln_generator.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_builder_app.cpp -o proj_builder_app.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_datatool_generated_src.cpp -o proj_datatool_generated_src.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_item.cpp -o proj_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_item.hpp:34,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_tree.hpp:34,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_tree.cpp:31:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_item.hpp:34,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_tree_builder.hpp:33,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_tree_builder.cpp:31:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_utils.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/file_contents.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/resolver.hpp:34,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_src_resolver.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_src_resolver.cpp:31:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_utils.cpp:31:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_utils.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/file_contents.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/resolver.hpp:34,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/resolver.cpp:31:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_item.hpp:34,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_generator.hpp:33,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_configure_prj_generator.cpp:31:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_tree.cpp -o proj_tree.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_tree_builder.cpp -o proj_tree_builder.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_src_resolver.cpp -o proj_src_resolver.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_utils.cpp -o proj_utils.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/resolver.cpp -o resolver.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_configure_prj_generator.cpp -o msvc_configure_prj_generator.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_projeIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_projects.hpp:34,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_projects.cpp:30:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_dlls_info.hpp:33,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_dlls_info.cpp:31:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_item.hpp:34,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_project_context.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_files_collector.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_files_collector.cpp:32:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/configurable_file.hpp:33,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/configurable_file.cpp:31:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_builder_app.hpp:33,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_gui.cpp:31:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.cpp:31:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_item.hpp:34,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/mac_prj_generator.hpp:33,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/mac_prj_generator.cpp:32:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cts.cpp -o proj_projects.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_dlls_info.cpp -o msvc_dlls_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_files_collector.cpp -o msvc_prj_files_collector.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/configurable_file.cpp -o configurable_file.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_gui.cpp -o ptb_gui.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.cpp -o ptb_registry.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/mac_prj_generator.cpp -o mac_prj_generator.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -WerrIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_builder_app.hpp:33,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/prj_file_collector.cpp:32:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
or=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/prj_file_collector.cpp -o prj_file_collector.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie file_contents.o msvc_configure.o msvc_makefile.o msvc_masterproject_generator.o msvc_prj_generator.o msvc_prj_utils.o msvc_project_context.o msvc_site.o msvc_sln_generator.o proj_builder_app.o proj_datatool_generated_src.o proj_item.o proj_tree.o proj_tree_builder.o proj_src_resolver.o proj_utils.o resolver.o msvc_configure_prj_generator.o proj_projects.o msvc_dlls_info.o msvc_prj_files_collector.o configurable_file.o ptb_gui.o ptb_registry.o mac_prj_generator.o prj_file_collector.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lxutil -lxncbi -lxregexp -lpcre -ldl -lm -lpthread -o project_tree_builder
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f project_tree_builder /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f project_tree_builder /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/project_tree_builder
make[3]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/project_tree_builder'
make[2]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/project_tree_builder'
**********************************************************************
Running project_tree_builder. Please wait.
**********************************************************************
./build-system/project_tree_builder/project_tree_builder -dll -dtdep -conffile /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder.ini -logfile Flat.configuration_log /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ src Makefile.flat
Done
===============================================================================
NCBI C++ Toolkit documentation:
Online: http://www.ncbi.nlm.nih.gov/toolkit/doc/book/
Local: ./doc/public/index.html
For the available configuration flags run: ./configure --help
CFLAGS = -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC
CXXFLAGS = -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC
CPPFLAGS = -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE
LDFLAGS = -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O
LIBRARIES: build as dynamic by default
FEATURES: GCC MT LFS DLL DLL_BUILD unix WinMain Linux
PACKAGES:
enabled: Iconv Z BZ2 PCRE MBEDTLS GMP GMP NETTLE NETTLE GNUTLS Boost.Spirit Boost.Test.Included LMDB LocalLMDB
disabled: UUID FUSE LIBUNWIND LocalZ LocalBZ2 LZO LocalPCRE GCRYPT OPENSSL KRB5 CURL Sybase DBLib FreeTDS MySQL BerkeleyDB BerkeleyDB++ ODBC PYTHON PYTHON25 PYTHON26 PYTHON27 PYTHON3 PERL Boost.Filesystem Boost.Iostreams Boost.Program-Options Boost.Regex Boost.System Boost.Test Boost.Thread C-Toolkit OpenGL MESA GLUT GLEW wxWidgets wx2.8 Fast-CGI LocalSSS LocalMSGMAIL2 SSSUTILS LocalNCBILS NCBILS2 SSSDB SP ORBacus ICU EXPAT SABLOT LIBXML LIBXSLT LIBEXSLT Xerces Xalan Zorba SQLITE3 SQLITE3ASYNC VDB OECHEM SGE MUPARSER HDF5 JPEG PNG TIFF GIF UNGIF XPM FreeType FTGL MAGIC MIMETIC GSOAP AVRO Cereal SASL2 MONGODB MONGODB3 GMOCK LAPACK LIBUV LIBSSH2 CASSANDRA LIBXLSXWRITER GRPC
PROJECTS:
enabled: cgi serial objects app algo
disabled: local_lbsm connext ncbi_crypt bdb dbapi ctools gui gbench
Tools / flags / paths: /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.mk
Configuration header: /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc/ncbiconf_unix.h
To build everything: cd /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build && /usr/bin/make all_r
or simply run /usr/bin/make in the current directory
Alternatively, cd /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build && /usr/bin/make -f Makefile.flat
******* CONFIGURATION SUCCESSFUL *******
make[1]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1'
debian/rules override_dh_auto_build-arch
make[1]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1'
cd c++/BUILD/build && \
make -j4 -f Makefile.flat all_projects="algo/blast/ app/ objmgr/ objtools/align_format/ objtools/blast/"
make[2]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build'
/usr/bin/make -w -j4 --jobserver-auth=3,4 -f Makefile.flat ptb_all.real MTARGET=
make[3]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build'
make[3]: warning: -j4 forced in submake: resetting jobserver mode.
cd corelib/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
cd util/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
cd serial/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
cd serial/datatool/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/serial/datatool'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/serial'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/serial/datatool'
cd algo/blast/composition_adjustment/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/serial'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/serial'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/serial'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/serial'
/usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
cd util/tables/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment'
/usr/bin/make[4] (Makefile.serial.lib): Nothing to be done for `export-headers'.
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[6]: warning: -j4 forced in submake: resetting jobserver mode.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/serial'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.composition_adjustment.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment'
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[6]: warning: -j4 forced in submake: resetting jobserver mode.
cd connect/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/serial'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/serial'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/serial'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables'
/usr/bin/make[5] (Makefile.precompile): Nothing to be done for `all'.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.cserial.lib): Nothing to be done for `export-headers'.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
/usr/bin/make[4] (Makefile.tables.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
cd algo/blast/core/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.connssl.lib): Nothing to be done for `export-headers'.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core'
/usr/bin/make[4] (Makefile.corelib.lib): Nothing to be done for `export-headers'.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.blast.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core'
/usr/bin/make[4] (Makefile.connect.lib): Nothing to be done for `export-headers'.
cd util/sequtil/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/serial'
cd objtools/blast/services/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.test_mt.lib): Nothing to be done for `export-headers'.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.xxconnect.lib): Nothing to be done for `export-headers'.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.test_boost.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.sequtil.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
cd util/creaders/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.blast_services.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services'
cd objmgr/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.xconnect.lib): Nothing to be done for `export-headers'.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr'
/usr/bin/make[4] (Makefile.creaders.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.xthrserv.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders'
cd objtools/blast/seqdb_reader/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
cd objtools/readers/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.objmgr.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr'
cd objmgr/util/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util'
/usr/bin/make[4] (Makefile.seqdb.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader'
cd objtools/seqmasks_io/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.xobjread.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util'
cd algo/blast/dbindex/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex'
/usr/bin/make[4] (Makefile.xobjreadex.lib): Nothing to be done for `export-headers'.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
cd algo/dustmask/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.xalgoblastdbindex.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex'
/usr/bin/make[4] (Makefile.seqmasks_io.lib): Nothing to be done for `export-headers'.
cd algo/winmask/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io'
cd objtools/alnmgr/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers'
cd algo/blast/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask'
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.xalgodustmask.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask'
cd objtools/blast/gene_info_reader/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.xalgowinmask.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask'
cd util/compress/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
/usr/bin/make[4] (Makefile.alnmgr.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr'
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
cd objtools/data_loaders/genbank/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api'
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.xblast.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api'
cd objtools/data_loaders/genbank/cache/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader'
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.gene_info.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader'
cd objtools/data_loaders/genbank/id1/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.compress.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api'
cd objtools/data_loaders/genbank/id2/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache'
/usr/bin/make[4] (Makefile.ncbi_xreader.lib): Nothing to be done for `export-headers'.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
/usr/bin/make[4] (Makefile.ncbi_xreader_cache.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache'
cd cgi/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2'
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/cgi'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.ncbi_xreader_id1.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1'
cd html/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
/usr/bin/make[4] (Makefile.ncbi_xloader_genbank.lib): Nothing to be done for `export-headers'.
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/html'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.ncbi_xreader_id2.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2'
cd objtools/align_format/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/cgi'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/cgi'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/cgi'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/html'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/cgi'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/html'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/html'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/html'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.cgi.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format'
cd objtools/blast/blastdb_format/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/cgi'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.html.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/html'
cd objtools/data_loaders/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/cgi'
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/cgi'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/cgi'
/usr/bin/make[4] (Makefile.align_format.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format'
cd algo/blast/blastinput/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format'
/usr/bin/make[4] (Makefile.fcgi.lib): Nothing to be done for `export-headers'.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.blastdb_format.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format'
cd algo/blast/proteinkmer/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput'
/usr/bin/make[4] (Makefile.ncbi_xloader_blastdb.lib): Nothing to be done for `export-headers'.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.blastinput.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput'
cd util/xregexp/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer'
/usr/bin/make[4] (Makefile.ncbi_xloader_blastdb_rmt.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/cgi'
cd objtools/cleanup/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.proteinkmer.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer'
cd objtools/format/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format'
/usr/bin/make[4] (Makefile.xregexp.lib): Nothing to be done for `export-headers'.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
cd algo/blast/format/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format'
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.cleanup.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
cd algo/blast/blastinput/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput/unit_test'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
make[4]: Nothing to be done for 'sources'.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput/unit_test'
cd algo/blast/dbindex/makeindex/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
/usr/bin/make[4] (Makefile.xformat.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format'
cd algo/blast/igblast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex/makeindex'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format'
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.xregexp_template_tester.lib): Nothing to be done for `export-headers'.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format'
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex/makeindex'
cd objtools/simple/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.xblastformat.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format'
cd algo/blast/proteinkmer/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer/unit_test'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer/unit_test'
cd algo/blast/unit_tests/blast_format/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blast_format'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.igblast.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast'
cd algo/blast/unit_tests/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blastdb'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple'
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blast_format'
cd objtools/blast/seqdb_writer/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blastdb'
/usr/bin/make[4] (Makefile.xobjsimple.lib): Nothing to be done for `export-headers'.
cd algo/blast/unit_tests/seqdb_reader/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
cd app/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.blast_unit_test_util.lib): Nothing to be done for `export-headers'.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make[4] (Makefile.writedb.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer'
cd app/dustmasker/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/dustmasker'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.seqalign_util.lib): Nothing to be done for `export-headers'.
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/dustmasker'
cd algo/segmask/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[6]: warning: -j4 forced in submake: resetting jobserver mode.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[6]: warning: -j4 forced in submake: resetting jobserver mode.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast/Makefile.legacy_blast builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast -w -j4 --jobserver-auth=9,10 all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[6]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask'
/usr/bin/make[4] (Makefile.xalgosegmask.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask'
cd app/segmasker/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/segmasker'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast/legacy_blast.pl /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast/legacy_blast.pl /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/legacy_blast.pl
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[6]: warning: -j4 forced in submake: resetting jobserver mode.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[6]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/segmasker'
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
cd app/winmasker/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast/Makefile.update_blastdb builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast -w -j4 --jobserver-auth=9,10 all
make[6]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
cd objmgr/split/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast/update_blastdb.pl /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast/update_blastdb.pl /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/update_blastdb.pl
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split'
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
make[6]: warning: -j4 forced in submake: resetting jobserver mode.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
make[6]: warning: -j4 forced in submake: resetting jobserver mode.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
/usr/bin/make[4] (Makefile.id2_split.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split'
cd objtools/align_format/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/winmasker/Makefile.windowmasker_2.2.22_adapter builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/winmasker -w -j4 --jobserver-auth=9,10 all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format/unit_test'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[6]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format/unit_test'
cd objtools/blast/blastdb_format/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format/unit_test'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.blast_app_util.lib): Nothing to be done for `export-headers'.
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format/unit_test'
cd objtools/blast/gene_info_reader/demo/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/demo'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/demo'
cd objtools/blast/gene_info_reader/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/winmasker/windowmasker_2.2.22_adapter.py /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/winmasker/windowmasker_2.2.22_adapter.py /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/windowmasker_2.2.22_adapter.py
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test'
cd objtools/blast/seqdb_reader/demo/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/demo'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
cd objtools/blast/seqdb_reader/test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/test'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/demo'
cd objtools/blast/seqdb_writer/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/test'
cd objtools/blast/services/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services/unit_test'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test'
cd corelib/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=corelib UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services/unit_test'
cd algo/blast/composition_adjustment/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=composition_adjustment UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment'
/usr/bin/make[4] (Makefile.corelib.lib): Nothing to be done for `all'.
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/composition_adjustment TMPL=composition_adjustment -w -j4 --jobserver-auth=7,8 all
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
cd util/tables/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=tables UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/tables TMPL=tables -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/composition_adjustment/compo_heap.c:137:1: warning: 's_CompoHeapIsValid' defined but not used [-Wunused-function]
s_CompoHeapIsValid(BlastCompo_HeapRecord * heapArray, int i, int n)
^~~~~~~~~~~~~~~~~~
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
cd connect/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xconnect UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect TMPL=xconnect -w -j4 --jobserver-auth=7,8 all
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/run_with_lock: Adjusting base from make_xconnect to make__connect_common per /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/.#lock-map.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment'
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/composition_adjustment/compo_heap.c -o compo_heap.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/composition_adjustment/compo_mode_condition.c -o compo_mode_condition.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/composition_adjustment/composition_adjustment.c -o composition_adjustment.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/composition_adjustment/matrix_frequency_data.c -o matrix_frequency_data.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/composition_adjustment/nlm_linear_algebra.c -o nlm_linear_algebra.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/bmake[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbsmd_stub.c -o ncbi_lbsmd_stub.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ansi_ext.c -o ncbi_ansi_ext.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_buffer.c -o ncbi_buffer.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_types.c -o ncbi_types.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.c -o ncbi_priv.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_core.c -o ncbi_core.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/n/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/composition_adjustment/redo_alignment.c:200:1: warning: 's_DistinctAlignmentsLength' defined but not used [-Wunused-function]
s_DistinctAlignmentsLength(BlastCompo_Alignment * list)
^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/composition_adjustment/redo_alignment.c:185:1: warning: 's_AlignmentsAreSorted' defined but not used [-Wunused-function]
s_AlignmentsAreSorted(BlastCompo_Alignment * alignments)
^~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:76:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connssl.h:47:25: warning: ISO C restricts enumerator values to range of 'int' [-Wpedantic]
eNcbiCred_MbedTls = 0xC12CC16C
^~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_util.c:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_util.c: In function 'CORE_SetLOGFILE_NAME_Ex':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_util.c:150:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(1, eLOG_Error, errno,
^~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:77:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_DoLog':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:508:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(112, level,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:247:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, data, size)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:199:5: note: in expansion of macro 'DO_CORE_LOG_DATA'
DO_CORE_LOG_DATA(NCBI_C_ERRCODE_X, subcode, level, data, size, \
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:548:13: note: in expansion of macro 'CORE_DATAF_X'
CORE_DATAF_X(109, level, data, size,
^~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:581:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(113, level,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:589:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_InitAPI_':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:872:13: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Secure socket layer (SSL) has not"
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_gethostname':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:1027:13: note: in expansion of macro 'CORE_LOG_ERRNO_EXX'
CORE_LOG_ERRNO_EXX(103, eLOG_Error,
^~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:1036:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(104, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_gethostbyname_':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:1169:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(106, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_getlocalhostaddress':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:1208:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(9, reget == eDefault ? eLOG_Warning : eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_gethostbyname':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:1234:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(155, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_gethostbyaddr_':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:1365:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(108, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_gethostbyaddr':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:1399:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(10, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'x_TryLowerSockFileno':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:1523:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(111, eLOG_Trace,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_Select_':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:1648:21: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(145, eLOG_Error, errno,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:1777:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(5, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_Poll_':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:1921:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(146, eLOG_Critical, errno,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:2066:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(147, ready ? eLOG_Warning : eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_IsConnected_':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:2640:13: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Trace,
^~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:2650:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(6, eLOG_Trace,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:2685:25: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Trace,
^~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_Recv':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:2836:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(7, eLOG_Trace,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_Read_':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:3017:17: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(8, eLOG_Error, errno,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_Send':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:3368:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(11, eLOG_Trace,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_WritePending':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:3520:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(12, sock->log != eOff
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_Shutdown':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:3692:21: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(13, !tv || (tv->tv_sec | tv->tv_usec)
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:3729:25: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(127, eLOG_Trace,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:3778:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(16, eLOG_Trace,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_Close_':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:3842:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(17, eLOG_Trace,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:3858:21: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(18, eLOG_Trace,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:3888:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(19, eLOG_Trace,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:3947:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(21, abort == 1 ? eLOG_Warning : eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_Connect_':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4064:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(131, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4083:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(142, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4107:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(22, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4138:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(23, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4204:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(151, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4215:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(135, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4278:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(25, sock->log != eOff
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4322:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(26, sock->log != eOff
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_Create':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4408:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(27, eLOG_Error, errno,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_CreateOnTop':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4461:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(47, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4484:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(148, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4522:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(48, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4563:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(50, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4577:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(49, eLOG_Error, errno,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4640:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(132, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4663:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(153, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4674:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(138, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4694:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(124, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4709:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(43, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_CreateListening':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4762:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(144, eLOG_Error,
^~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables'
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/tables/raw_scoremat.c -o raw_scoremat.o
/bin/rm -f libtables.so .libtables.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libtables.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC raw_scoremat.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtables.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libtables.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libtables.so
/bin/ln -f .tables.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.tables.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4806:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(34, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4852:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(35, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4907:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(36, error != SOCK_EADDRINUSE
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4928:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(150, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4998:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(37, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables'
cd util/sequtil/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=sequtil UNIX_PROJ="" sources= configurables=configurables.null
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5065:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(115, eLOG_Note,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_Accept':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5112:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(39, eLOG_Error,
^~~~~~~~~~~
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5168:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(40, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5227:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(41, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connssl.h:47:25: warning: ISO C restricts enumerator values to range of 'int' [-Wpedantic]
eNcbiCred_MbedTls = 0xC12CC16C
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5286:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(42, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5297:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(152, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5308:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(137, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5328:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(128, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_CloseListening':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5373:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(44, eLOG_Note,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5402:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(45, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_RecvMsg':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5490:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(20, eLOG_Error,
^~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5538:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(94, eLOG_Trace,
^~~~~~~~~~~~~~~~~~~
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_SendMsg':
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5573:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(154, eLOG_Error, errno,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5589:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(88, eLOG_Error,
^~~~~~~~~~~
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5598:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(89, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5648:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(90, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5694:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(91, eLOG_Trace,
^~~~~~~~~~~~~~~~~~~
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/sequtil TMPL=sequtil -w -j4 --jobserver-auth=7,8 all
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'TRIGGER_Create':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5737:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(28, eLOG_Error, errno,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5747:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(143, eLOG_Warning, errno,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5759:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(29, eLOG_Error, errno,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5769:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(30, eLOG_Warning, errno,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5788:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(116, eLOG_Note,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'TRIGGER_Close':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5850:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(117, eLOG_Note,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'LSOCK_GetOSHandleEx':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6061:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(46, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'SOCK_Reconnect':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6249:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(52, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6259:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(53, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6271:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(51, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'SOCK_Shutdown':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6301:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(54, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6308:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(55, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6316:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(15, eLOG_Error,
^~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c: In function 'ConnNetInfo_Log':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:115:54: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
LOG_Write(lg, code, subcode, level, THIS_MODULE, CORE_CURRENT_FUNCTION, \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c:1412:9: note: in expansion of macro 'LOG_WRITE'
LOG_WRITE(lg, NCBI_C_ERRCODE_X, 11,
^~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c: In function 'URL_ConnectEx':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c:1637:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(2, eLOG_Critical, "[URL_Connect] Bad argument(s)");
^~~~~~~~~~
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c:1654:9: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Critical,
^~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c:1686:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(3, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c:1702:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(4, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c:1753:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(5, eLOG_Error, x_errno,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c:1770:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(6, eLOG_Error, x_errno,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'SOCK_Wait':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6446:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(56, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c:1814:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(7, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c: In function 'URL_Connect':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c:1847:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(9, eLOG_Error,
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c:1887:17: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(8, eLOG_Error, errno,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6474:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(57, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6488:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(58, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6502:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(59, eLOG_Warning,
^~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'x_ReInit':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6511:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(60, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX'
#define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status)
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:273:13: note: in expansion of macro 'CONN_LOG'
CONN_LOG(4, ReInit, eLOG_Critical, "Partial re-init not allowed");
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6521:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(61, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX'
#define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status)
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:303:21: note: in expansion of macro 'CONN_LOG'
CONN_LOG(3, Close,
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6531:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(62, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX'
#define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status)
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:307:21: note: in expansion of macro 'CONN_LOG'
CONN_LOG(3, ReInit, eLOG_Error,
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 's_Open':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX'
#define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status)
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:384:9: note: in expansion of macro 'CONN_LOG'
CONN_LOG(5, Open, eLOG_Error, "Failed to open connection");
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'CONN_CreateEx':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX'
#define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status)
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:426:9: note: in expansion of macro 'CONN_LOG'
CONN_LOG(2, Create, eLOG_Error, "NULL connector");
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'CONN_ReInit':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetTimeout':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:448:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(1, ReInit);
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6668:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(63, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'SOCK_GetTimeout':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6709:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(64, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'SOCK_Read':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6751:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(65, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6761:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(66, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:448:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(1, ReInit);
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'SOCK_ReadLine':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6792:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(125, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'CONN_GetType':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:456:5: note: in expansion of macro 'CONN_NOT_NULL_EX'
CONN_NOT_NULL_EX(6, GetType, 0);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:456:5: note: in expansion of macro 'CONN_NOT_NULL_EX'
CONN_NOT_NULL_EX(6, GetType, 0);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'CONN_Description':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:465:5: note: in expansion of macro 'CONN_NOT_NULL_EX'
CONN_NOT_NULL_EX(7, Description, 0);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:465:5: note: in expansion of macro 'CONN_NOT_NULL_EX'
CONN_NOT_NULL_EX(7, Description, 0);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'CONN_GetPosition':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:477:5: note: in expansion of macro 'CONN_NOT_NULL_EX'
CONN_NOT_NULL_EX(30, GetPosition, 0);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:477:5: note: in expansion of macro 'CONN_NOT_NULL_EX'
CONN_NOT_NULL_EX(30, GetPosition, 0);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'SOCK_Pushback':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6868:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(67, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:490:9: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(31, GetPosition, eLOG_Error, errbuf, 0);
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'CONN_SetTimeout':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:506:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(8, SetTimeout);
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'SOCK_Write':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6920:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(68, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:506:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(8, SetTimeout);
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:546:9: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(9, SetTimeout, eLOG_Error, errbuf, eIO_InvalidArg);
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'CONN_GetTimeout':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:561:5: note: in expansion of macro 'CONN_NOT_NULL_EX'
CONN_NOT_NULL_EX(10, GetTimeout, 0);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:561:5: note: in expansion of macro 'CONN_NOT_NULL_EX'
CONN_NOT_NULL_EX(10, GetTimeout, 0);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:569:9: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(11, GetTimeout, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:584:9: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(12, GetTimeout, eLOG_Error, errbuf, 0);
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'CONN_Wait':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:600:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(13, Wait);
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:600:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(13, Wait);
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX'
#define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status)
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:644:9: note: in expansion of macro 'CONN_LOG'
CONN_LOG(event != eIO_Read ? 15 : 14, Wait, level,
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 's_CONN_Write':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX'
#define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status)
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:665:9: note: in expansion of macro 'CONN_LOG'
CONN_LOG(16, Write, eLOG_Critical, "Cannot write data");
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX'
#define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status)
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:707:13: note: in expansion of macro 'CONN_LOG'
CONN_LOG(17, Write, level, "Unable to write data");
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'CONN_Write':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:749:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(18, Write);
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:749:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(18, Write);
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6947:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(69, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6957:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(70, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'CONN_Pushback':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:784:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(19, Pushback);
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'SOCK_Abort':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:784:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(19, Pushback);
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6976:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(71, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6983:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(72, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'CONN_Flush':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:804:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(20, Flush);
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:804:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(20, Flush);
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX'
#define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status)
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:819:9: note: in expansion of macro 'CONN_LOG'
CONN_LOG(21, Flush, eLOG_Warning, "Failed to flush");
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 's_CONN_Read':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX'
#define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status)
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:844:9: note: in expansion of macro 'CONN_LOG'
CONN_LOG(22, Read, eLOG_Critical, "Cannot read data");
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:885:17: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(32, Read, eLOG_Critical,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX'
#define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status)
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:911:13: note: in expansion of macro 'CONN_LOG'
CONN_LOG(23, Read, level, "Unable to read data");
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'CONN_Read':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:962:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(24, Read);
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:962:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(24, Read);
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'CONN_ReadLine':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:1011:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(25, ReadLine);
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:1011:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(25, ReadLine);
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:1059:17: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(35, ReadLine, eLOG_Critical,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'CONN_Status':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:1078:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(26, Status);
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:1078:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(26, Status);
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'CONN_Close':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:1117:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(27, Close);
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:1117:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(27, Close);
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'CONN_SetCallback':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:1137:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(28, SetCallback);
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:1137:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(28, SetCallback);
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:1143:9: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(29, SetCallback, eLOG_Error, errbuf, eIO_InvalidArg);
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'SOCK_GetOSHandleEx':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7133:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(73, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetCork':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'CONN_GetSOCK':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7196:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(158, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:1164:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(36, GetSOCK);
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7203:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(159, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:1164:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(36, GetSOCK);
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7216:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(160, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'SOCK_DisableOSSendDelay':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7233:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(156, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7240:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(157, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7253:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(75, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'DSOCK_CreateEx':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7305:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(76, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'DSOCK_Bind':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7426:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(79, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7433:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(78, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7451:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(80, error != SOCK_EADDRINUSE
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7467:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(114, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'DSOCK_Connect':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7496:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(82, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7503:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(81, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7522:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(83, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7535:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(84, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7564:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(85, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'DSOCK_WaitMsg':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7592:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(96, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7599:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(95, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'DSOCK_RecvMsg':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7638:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(93, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7645:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(92, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'DSOCK_SendMsg':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7682:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(87, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7689:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(86, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'DSOCK_WipeMsg':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7721:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(98, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7728:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(97, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7748:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(99, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'DSOCK_SetBroadcast':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7766:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(101, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7773:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(100, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7793:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(102, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetReuseAddress':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7955:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(74, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetupSSLInternal':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:8339:13: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Cannot reset SSL while it is in use");
^~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connector.c:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connector.c: In function 'METACONN_Remove':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connector.c:41:5: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connector.c:63:13: note: in expansion of macro 'METACONN_LOG'
METACONN_LOG(34, eLOG_Error,
^~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connector.c: In function 'METACONN_Insert':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connector.c:41:5: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connector.c:92:9: note: in expansion of macro 'METACONN_LOG'
METACONN_LOG(33, eLOG_Error,
^~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket_connector.c:38:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket_connector.c: In function 's_VT_Open':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket_connector.c:171:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(163, eLOG_Error,
^~~~~~~~~~~
o-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_util.c -o ncbi_util.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c -o ncbi_socket.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c -o ncbi_connutil.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c -o ncbi_connection.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connector.c -o ncbi_connector.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket_connector.c -o ncbi_socket_connector.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -last/composition_adjustment/optimize_target_freq.c -o optimize_target_freq.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/composition_adjustment/redo_alignment.c -o redo_alignment.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/composition_adjustment/smith_waterman.c -o smith_waterman.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/composition_adjustment/unified_pvalues.c -o unified_pvalues.o
/bin/rm -f libcomposition_adjustment.so .libcomposition_adjustment.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libcomposition_adjustment.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC compo_heap.o compo_mode_condition.o composition_adjustment.o matrix_frequency_data.o nlm_linear_algebra.o optimize_target_freq.o redo_alignment.o smith_waterman.o unified_pvalues.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libcomposition_adjustment.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libcomposition_adjustment.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libcomposition_adjustment.so
/bin/ln -f .composition_adjustment.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.composition_adjustment.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment'
cd util/creaders/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=creaders UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/creaders TMPL=creaders -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:38:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c: In function 's_Adjust':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:368:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(2, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:383:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(17, eLOG_Trace,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:409:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(3, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:424:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(18, eLOG_Trace,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:434:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(4, eLOG_Critical,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:458:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c: In function 's_Connect':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:561:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(5, eLOG_Critical,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:701:25: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(20, eLOG_Error, error,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c: In function 's_ConnectAndSend':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:912:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(6, eLOG_Error, error,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c: In function 'x_ReadChunkHead':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1043:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(23, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c: In function 's_ReadData':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1114:17: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(24, eLOG_Error, error,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1138:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(25, eLOG_Error, error,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c: In function 's_ReadHeader':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1212:17: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(7, eLOG_Error, error,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1249:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(8, level,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:247:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, data, size)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:199:5: note: in expansion of macro 'DO_CORE_LOG_DATA'
DO_CORE_LOG_DATA(NCBI_C_ERRCODE_X, subcode, level, data, size, \
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1313:9: note: in expansion of macro 'CORE_DATAF_X'
CORE_DATAF_X(9, fatal ? eLOG_Error : eLOG_Note, hdr, size,
^~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1330:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(22, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:247:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, data, size)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:199:5: note: in expansion of macro 'DO_CORE_LOG_DATA'
DO_CORE_LOG_DATA(NCBI_C_ERRCODE_X, subcode, level, data, size, \
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1349:17: note: in expansion of macro 'CORE_DATAF_X'
CORE_DATAF_X(9, eLOG_Note, hdr, size,
^~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1399:25: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(10, eLOG_Critical,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1557:21: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning,
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1575:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(11, eLOG_Error, error,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1630:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(19, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1635:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(12, err && !(uuu->flags & fHTTP_SuppressMessages)
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1646:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(13, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:247:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, data, size)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:199:5: note: in expansion of macro 'DO_CORE_LOG_DATA'
DO_CORE_LOG_DATA(NCBI_C_ERRCODE_X, subcode, level, data, size, \
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1654:17: note: in expansion of macro 'CORE_DATAF_X'
CORE_DATAF_X(14, eLOG_Note, s, n,
^~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1663:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(15, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c: In function 's_Read':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1834:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(16, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1877:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(21, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c: In function 's_VT_Write':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:2116:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(24, eLOG_Error,
^~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/sequtil/sequtil_manip.cpp:32:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/sequtil/sequtil.cpp:32:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/sequtil/sequtil_convert.cpp:32:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/sequtil/sequtil_convert_imp.cpp:32:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:115:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Create':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:269:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:290:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(2, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_AttachFast':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:314:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(3, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:323:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(4, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Attach':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:354:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(34, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:337:68: warning: variable 'p' set but not used [-Wunused-but-set-variable]
const SHEAP_HeapBlock* b = (const SHEAP_HeapBlock*) base, *p = 0;
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:115:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c: In function 's_HEAP_Find':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:451:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(8, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Alloc':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:658:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(6, eLOG_Warning, "Heap Alloc: NULL heap");
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:664:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(7, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:711:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(9, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Free':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:833:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(10, eLOG_Warning, "Heap Free: NULL heap");
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:839:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(11, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:852:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(13, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:860:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(12, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:872:5: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(14, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_FreeFast':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:884:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(15, eLOG_Warning, "Heap Free: NULL heap");
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:890:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(16, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:904:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(17, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:915:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(18, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:922:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(19, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Trim':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:944:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(30, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:979:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(31, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:1006:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(32, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c: In function 's_HEAP_Walk':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:1028:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(28, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:1042:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(26, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:1045:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(27, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:1057:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(23, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:1144:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(21, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:1159:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(20, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:1177:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(22, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:1188:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(24, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Walk':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:1204:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(29, eLOG_Warning, "Heap Walk: NULL heap");
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Destroy':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:1306:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(33, eLOG_Error,
^~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service.c:41:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service.c: In function 'x_ServiceName':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service.c:85:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(7, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service.c:94:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(8, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service.c: In function 'x_Open':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service.c:336:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, eLOG_Error,
^~~~~~~~~~~
I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_file_connector.c -o ncbi_file_connector.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c -o ncbi_http_connector.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_memory_connector.c -o ncbi_memory_connector.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c -o ncbi_heapmgr.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_server_info.c -o ncbi_server_info.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service.c -o ncbi_service.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_host_info.c -o ncbi_host_info.oIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_dispd.c:38:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_dispd.c: In function 's_Resolve':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_dispd.c:198:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(5, eLOG_Error,
^~~~~~~~~~~
In file included from /usr/include/string.h:494,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/creaders/alnread.c:35:
In function 'strcpy',
inlined from 's_RemoveBasePairCountCommentsFromData' at /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/creaders/alnread.c:4418:25,
inlined from 's_ProcessAlignFileRawForMarkedIDs' at /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/creaders/alnread.c:4452:5,
inlined from 'ReadAlignmentFileEx2' at /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/creaders/alnread.c:6116:9:
/usr/include/arm-linux-gnueabihf/bits/string_fortified.h:90:10: warning: '__builtin_strcpy' accessing 1 byte at offsets 0 and [0, 2147483647] may overlap 1 byte at offset 0 [-Wrestrict]
return __builtin___strcpy_chk (__dest, __src, __bos (__dest));
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:50:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPCloseData':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:145:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(7, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:150:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(9, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:164:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(11, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:168:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(8, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:185:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, xxx->send ? eLOG_Error : eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c: In function 's_FTPReply':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:293:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(10, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c: In function 's_FTPCommandEx':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:373:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(4, eLOG_Trace,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPLogin':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:606:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(3, eLOG_Trace,
^~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c: In function 's_OpenDispatcher':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c:105:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(5, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c: In function 's_ParseHeader':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c:180:49: warning: format '%n' expects argument of type 'int *', but argument 7 has type 'unsigned int *' [-Wformat=]
if (sscanf(header, "%u.%u.%u.%u%n", &i1, &i2, &i3, &i4, &n) < 4
~^ ~~
%n
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c:181:51: warning: format '%n' expects argument of type 'int *', but argument 5 has type 'unsigned int *' [-Wformat=]
|| sscanf(header + n, "%hu%x%n", &uuu->port, &tkt, &m) < 2
~^ ~~
%n
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPPassive':
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c: In function 's_Open':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c:890:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(4, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c:916:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(9, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:965:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(2, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPXfer':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:1125:21: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(5, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c: In function 's_VT_Open':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c:1048:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(10, eLOG_Critical,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c:1126:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(6, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c:1138:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(11, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c: In function 's_FTPPollCntl':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:1656:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(12, xxx->data ? eLOG_Error : eLOG_Warning,
^~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c: In function 's_SendRcpt':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:417:13: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(3, "Recipient address is too long");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:420:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:428:13: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(4, write_error);
^~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:366:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:432:13: note: in expansion of macro 'SENDMAIL_RETURN2'
SENDMAIL_RETURN2(5, proto_error, buf);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c: In function 's_VT_Open':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:1926:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(13, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c: In function 'CORE_SendMailEx':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:487:9: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(6, "SSendMailInfo inited improperly: invalid magic");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:492:9: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(7, "At least one message recipient must be specified");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:366:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:502:9: note: in expansion of macro 'SENDMAIL_RETURN2'
SENDMAIL_RETURN2(8, "Cannot connect to sendmail", buffer);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:366:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:509:9: note: in expansion of macro 'SENDMAIL_RETURN2'
SENDMAIL_RETURN2(9, "Protocol error in connection init", buffer);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:514:9: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(10, "Unable to get local host name");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:519:9: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(11, "Write error in HELO command");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:366:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:522:9: note: in expansion of macro 'SENDMAIL_RETURN2'
SENDMAIL_RETURN2(12, "Protocol error in HELO command", buffer);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:527:9: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(13, "Write error in MAIL command");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:366:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:530:9: note: in expansion of macro 'SENDMAIL_RETURN2'
SENDMAIL_RETURN2(14, "Protocol error in MAIL command", buffer);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:551:9: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(15, "Write error in DATA command");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:366:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:553:9: note: in expansion of macro 'SENDMAIL_RETURN2'
SENDMAIL_RETURN2(16, "Protocol error in DATA command", buffer);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:584:21: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(32, "Write error in sending Date");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:591:21: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(33, "Write error in sending From");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:599:17: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(17, "Write error in sending Subject");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c: In function 's_VT_Write':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:606:17: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(18, "Write error in sending To");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:613:17: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(19, "Write error in sending Cc");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:2001:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(6, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:617:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(2, eLOG_Warning,
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:628:9: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(20, "Write error in sending mailer information");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:656:17: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(21, "Write error while sending custom header");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:366:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:665:13: note: in expansion of macro 'SENDMAIL_RETURN2'
SENDMAIL_RETURN2(22, error, buffer);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:668:13: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(23, "Write error in finalizing custom header");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:677:17: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(24, "Write error in message body delimiter");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:703:17: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(25, "Write error while sending message body");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:366:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:712:13: note: in expansion of macro 'SENDMAIL_RETURN2'
SENDMAIL_RETURN2(26, error, buffer);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:716:13: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(27, "Write error while finalizing message body");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:719:9: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(28, "Write error while finalizing message");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:366:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:724:9: note: in expansion of macro 'SENDMAIL_RETURN2'
SENDMAIL_RETURN2(29, "Protocol error in sending message", buffer);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:727:9: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(30, "Write error in QUIT command");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:366:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:729:9: note: in expansion of macro 'SENDMAIL_RETURN2'
SENDMAIL_RETURN2(31, "Protocol error in QUIT command", buffer);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c: In function 's_CreateConnector':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:2311:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "fFTP_UseProxy not yet implemented");
^~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/sequtil/sequtil.hpp:34,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/sequtil/sequtil_tables.hpp:34,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/sequtil/sequtil_tables.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/sequtil/sequtil_shared.cpp:32:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders'
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/creaders/alnread.c -o alnread.o
/bin/rm -f libcreaders.so .libcreaders.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libcreaders.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC alnread.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libcreaders.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libcreaders.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libcreaders.so
/bin/ln -f .creaders.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.creaders.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders'
cd objtools/blast/gene_info_reader/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=gene_info UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/gene_info_reader TMPL=gene_info -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_dispd.c -o ncbi_dispd.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c -o ncbi_service_connector.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c -o ncbi_sendmail.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c -o ncbi_ftp_connector.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lb.c -o ncbi_lb.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_local.c -o ncbi_local.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-sIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:38:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 'g_LBOS_StringConcat':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:437:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eLBOS_MemAlloc, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 'g_LBOS_StringNConcat':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:462:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eLBOS_MemAlloc, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 'g_LBOS_RegGet':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:486:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eLBOS_MemAlloc, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:500:13: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eLBOS_MemAlloc, eLOG_Warning,
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 'g_LBOS_GetLBOSAddressEx':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:568:5: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Trace, "Getting LBOS addresses...");
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:582:17: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(1, eLOG_Error, "Use of custom LBOS address "
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:163:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:589:17: note: in expansion of macro 'CORE_LOG_ERRNO_X'
CORE_LOG_ERRNO_X(1, eLOG_Warning, errno,
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:597:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:608:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, eLOG_Note,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_ReadLbosresolver':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:175:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(0, 0, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:727:9: note: in expansion of macro 'CORE_LOGF_ERRNO'
CORE_LOGF_ERRNO(eLOG_Warning, errno,
^~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:175:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(0, 0, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:736:9: note: in expansion of macro 'CORE_LOGF_ERRNO'
CORE_LOGF_ERRNO(eLOG_Warning, errno,
^~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:745:9: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Warning,
^~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_ConnectURL':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:829:5: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Trace, ("Parsing URL \"%s\"", url));
^~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:831:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning, "Cannot parse URL");
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:834:5: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Trace, ("Creating HTTP%s connector",
^~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:841:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning, "Cannot create HTTP connector");
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:844:5: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Trace, "Creating connection");
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:846:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning, "Cannot create connection");
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_UrlReadAll':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:905:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "s_LBOS_UrlReadAll: No RAM. "
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:917:13: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Critical, ("s_LBOS_UrlReadAll: LBOS returned "
^~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:945:17: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning, "s_LBOS_UrlReadAll: Buffer "
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:959:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning, "s_LBOS_UrlReadAll: Buffer shrink error, using "
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_ResolveIPPort':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:991:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "s_LBOS_ResolveIPPort: No RAM. "
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1050:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "s_LBOS_ResolveIPPort: No RAM. "
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_FillCandidates':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1200:5: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, eLOG_Trace, ("Trying to find servers of \"%s\" with "
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1206:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, eLOG_Trace, ("No servers of \"%s\" found by LBOS",
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1211:5: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, eLOG_Trace, ("Found %u servers of \"%s\" with "
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1224:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_CheckAnnounceArgs':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1254:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Error with announcement, "
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1261:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Error with announcement, missing http:// or "
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1271:17: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Error with announcement, "
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1281:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Error with announcement, invalid port.");
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1285:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Error with announcement, "
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1290:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Error with announcement, "
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1295:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Error with announcement, "
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_CheckDeannounceArgs':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1309:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Invalid argument passed for de-announcement, "
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1315:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Invalid argument passed for de-announcement, "
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1320:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Invalid argument passed for de-announcement, "
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1325:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Invalid argument passed for de-announcement, "
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_Replace0000WithIP':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1410:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning, "Failed memory allocation. Most likely, "
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1418:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning,
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1425:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning,
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_ConstructData':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1569:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(1, eLOG_Error, "Could not allocate memory for LBOS mapper");
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_Initialize':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1644:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(1, eLOG_Trace, "No DTAB in registry");
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1646:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, eLOG_Trace,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1660:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_ParseHeader':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1708:9: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Critical, ("s_LBOS_UrlReadAll: LBOS returned status "
^~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_Reset':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1771:17: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "s_LBOS_Reset: No RAM. "
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 'SERV_LBOS_Open':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1897:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning, "Mask was provided instead of service name. "
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1905:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning, "\"iter->name\" is null, not able "
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1920:13: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning, "Could not concatenate dbaf with service "
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1935:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning,
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1949:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical,
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_Announce':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2064:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning, "Announce failed. No LBOS found.");
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2069:9: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Warning, ("Announce failed. "
^~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2078:13: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning, "Failed memory allocation. Most likely, "
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2088:13: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning, "g_LBOS_Announce: LBOS answered 200 OK, but "
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2101:9: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Warning, ("Announce failed. "
^~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 'LBOS_Announce':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2167:13: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eLBOS_InvalidArgs, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 'LBOS_AnnounceFromRegistry':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2236:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(eLBOS_InvalidArgs, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2243:53: warning: format '%d' expects argument of type 'int *', but argument 3 has type 'unsigned int *' [-Wformat=]
if (strlen(port_str) > 5 || (sscanf(port_str, "%d", &port) != 1) ||
~^ ~~~~~
%d
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:38:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 'LBOS_Deannounce':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2358:13: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eLBOS_DNSResolve, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 'LBOS_DeannounceAll':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2416:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eLBOS_MemAlloc, eLOG_Warning,
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_CheckConfArgs':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2468:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eLBOS_InvalidArgs, eLOG_Warning,
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2475:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(eLBOS_InvalidArgs, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 'LBOS_ServiceVersionSet':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2567:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eLBOS_InvalidArgs, eLOG_Warning,
^~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/sequtil/sequtil.cpp -o sequtil.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/sequtil/sequtil_convert.cpp -o sequtil_convert.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/sequtil/sequtil_convert_imp.cpp -o sequtil_convert_imp.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/sequtil/sequtil_manip.cpp -o sequtil_manip.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/sequtil/sequtil_tables.cpp -o sequtil_tables.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/sequtil/sequtil_shared.cpp -o sequtil_shared.o
/bin/rm -f libsequtil.so .libsequtil.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libsequtil.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:39:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function 's_Init':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:280:13: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Libc, eLOG_Error,
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function 's_CONN_Create':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:301:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(eNSub_Connect, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:310:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Connect, eLOG_Error, "Unable to create connector.");
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function 's_UpdateDtab':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:378:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Alloc, eLOG_Critical, "Couldn't alloc for dtab.");
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function 's_GetReqMethod':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:398:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Alloc, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function 's_GetScheme':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:420:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Alloc, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function 's_GetProxyPort':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:443:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Alloc, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function 's_AddServerInfo':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:527:13: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Alloc, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function 's_ParseExpires':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:577:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(eNSub_Json, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:607:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(eNSub_Json, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function 's_ReadFullResponse':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:652:13: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Alloc, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:686:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(eNSub_HttpRead, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:706:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_TooLong, eLOG_Error, "Insufficient buffer size.");
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function 's_ParseResponse':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:749:13: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Json, eLOG_Error,
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:754:13: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Json, eLOG_Error,
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:760:13: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Json, eLOG_Error,
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:776:13: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Json, eLOG_Error,
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:781:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(eNSub_NoService, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:789:13: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Json, eLOG_Error,
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:836:17: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Json, eLOG_Error,
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:844:17: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Json, eLOG_Error,
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:857:17: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Json, eLOG_Error,
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:863:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(eNSub_Json, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:897:21: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(eNSub_Json, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:914:21: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Json, eLOG_Error,
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:924:21: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(eNSub_Json, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:941:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(eNSub_Json, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:964:21: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(eNSub_Json, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:983:21: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Json, eLOG_Error,
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:989:21: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Json, eLOG_Warning,
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:1007:17: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Alloc, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:1024:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(eNSub_BadData, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:1037:17: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Alloc, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function 's_GetDtabHeaderFromBuf':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:1079:13: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Alloc, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function 's_UpdateDtabFromRegistry':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:1140:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Alloc, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function 's_ProcessDtab':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:1181:13: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_TooLong, eLOG_Error, "Dtab too long.");
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function 'SERV_NAMERD_Open':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:1405:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_BadData, eLOG_Error,
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:1415:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(eNSub_BadData, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:1424:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_BadData, eLOG_Error,
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:1431:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Alloc, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:1439:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Alloc, eLOG_Critical, "Couldn't clone net_info.");
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:1446:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_BadData, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/parson.c: In function 'remove_comments':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/parson.c:281:13: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
for (i = 0; i < (ptr - string) + end_token_len; i++)
^~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/parson.c:283:12: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
string = ptr + end_token_len - 1;
^~~~~~
-g -O -fPIC sequtil.o sequtil_convert.o sequtil_convert_imp.o sequtil_manip.o sequtil_tables.o sequtil_shared.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsequtil.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libsequtil.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libsequtil.so
/bin/ln -f .sequtil.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.sequtil.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil'
cd html/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=html UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/html'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/html'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/html'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/html'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/html'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/html TMPL=html -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
ecurity -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_base64.c -o ncbi_base64.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_version.c -o ncbi_version.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c -o ncbi_lbos.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c -o ncbi_namerd.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/parson.c -o parson.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ipv6.c -o ncbi_ipv6.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /bIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/gene_info_reader/gene_info.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/gene_info_reader/file_utils.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/gene_info_reader/file_utils.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/gene_info_reader/gene_info.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/gene_info_reader/gene_info.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/env_reg.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/gene_info_reader/gene_info_reader.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/html/node.cpp:31:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/html/html.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/html/html.cpp:31:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/html/html.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/html/htmlhelper.cpp:32:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/html/page.cpp:31:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_socket.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_socket_unix.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket_cxx.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_core_cxx.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_namedpipe.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_namedpipe_connector.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_conn_stream.hpp:73,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_conn_streambuf.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_conn_streambuf.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_core_cxx.cpp:39:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/email_diag_handler.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/email_diag_handler.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
uild/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_iprange.c -o ncbi_iprange.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_localip.c -o ncbi_localip.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket_cxx.cpp -o ncbi_socket_cxx.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_core_cxx.cpp -o ncbi_core_cxx.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/email_diag_handler.cpp -o email_diag_handler.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_conn_streambuf.cpp -o ncbi_conn_streambuf.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_conn_stream.cpp -o ncbi_conn_stream.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LAIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_core_cxx.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_namedpipe.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_namedpipe_connector.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_conn_stream.hpp:73,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_conn_streambuf.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_conn_stream.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/html/pager.cpp:31:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_conn_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/stream_utils.hpp:45,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/cgi/ncbicgi.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/html/selection.cpp:31:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=GENEINFO -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/gene_info_reader/gene_info.cpp -o gene_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=GENEINFO -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/gene_info_reader/gene_info_reader.cpp -o gene_info_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=GENEINFO -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/gene_info_reader/file_utils.cpp -o file_utils.o
/bin/rm -f libgene_info.so .libgene_info.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libgene_info.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC gene_info.o gene_info_reader.o file_utils.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgene_info.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libgene_info.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libgene_info.so
/bin/ln -f .gene_info.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.gene_info.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader'
cd corelib/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=test_boost UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
/usr/bin/make[4] (Makefile.test_boost.lib): Nothing to be done for `all'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
cd util/xregexp/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xregexp UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
/usr/bin/make[4] (Makefile.xregexp.lib): Nothing to be done for `all'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
cd objtools/blast/gene_info_reader/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=gene_info_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_core_cxx.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_namedpipe.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namedpipe.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/gene_info_reader/unit_test TMPL=gene_info_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd util/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=util UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util'
/usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `all'.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util'
cd serial/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=serial UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/serial'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/serial'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/serial'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/serial'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/serial'
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_core_cxx.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_namedpipe.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_namedpipe_connector.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namedpipe_connector.cpp:38:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial TMPL=serial -w -j4 --jobserver-auth=7,8 all
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/gene_info_reader/unit_test/gene_info_test.cpp:31:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/hookdata.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/objectinfo.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/html'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/html/node.cpp -o node.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/html/html.cpp -o html.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/html/htmlhelper.cpp -o htmlhelper.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/html/page.cpp -o page.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/html/pager.cpp -o pager.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/html/selection.cpp -o selection.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/typeinfo.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/hookdatakey.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_pipe.cpp:41:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_process.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_pipe.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_pipe_connector.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_pipe_connector.cpp:38:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/html/html.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/html/components.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/html/components.cpp:31:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_core_cxx.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_conn_reader_writer.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_conn_reader_writer.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/html/commentdiag.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/html/commentdiag.cpp:31:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_conn_test.cpp -o ncbi_conn_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_misc.cpp -o ncbi_misc.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namedpipe.cpp -o ncbi_namedpipe.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namedpipe_connector.cpp -o ncbi_namedpipe_connector.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_pipe.cpp -o ncbi_pipe.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_pipe_connector.cpp -o ncbi_pipe_connector.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_conn_reader_writer.cpp -o ncbi_conn_reader_writer.o
/usr/bin/g++ -std=gnu++11 -c -WIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/objectiter.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/serial'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/hookdata.cpp -o hookdata.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/hookdatakey.cpp -o hookdatakey.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/typeinfo.cpp -o typeinfo.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/objectinfo.cpp -o objectinfo.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/objectiter.cpp -o objectiter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/objectio.cpp -o objectio.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THRIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/html/indentstream.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/html/indentstream.cpp:31:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/objectio.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/html/node.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/html/html_exception.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_socket.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_userhost.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialdef.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/impl/typeref.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/typeref.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/typemap.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_session.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connssl.h:47:25: warning: ISO C restricts enumerator values to range of 'int' [-Wpedantic]
eNcbiCred_MbedTls = 0xC12CC16C
^~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connssl.h:47:25: warning: ISO C restricts enumerator values to range of 'int' [-Wpedantic]
eNcbiCred_MbedTls = 0xC12CC16C
^~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/html/htmlhelper.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/html/writer_htmlenc.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c: In function 'x_GnuTlsLogger':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c:190:5: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Note, ("GNUTLS%d: %.*s", level, (int) len, message));
^~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c: In function 'x_ErrorToStatus':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c:251:5: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Trace, ("GNUTLS error %d -> CONNECT GNUTLS status %s",
^~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c: In function 'x_StatusToError':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c:293:9: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Trace, ("CONNECT GNUTLS status %s -> %s %d",
^~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c: In function 's_GnuTlsCreate':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c:307:5: warning: 'gnutls_connection_end_t' is deprecated [-Wdeprecated-declarations]
gnutls_connection_end_t end = (side == eSOCK_Client
^~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c:318:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Error, "Server-side SSL not yet supported with GNUTLS");
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c:330:9: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Error, ("Cannot %s GNUTLS credentials: %s",
^~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c: In function 's_GnuTlsInit':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c:692:9: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(level, ("GNUTLS V%s (LogLevel=%d)",
^~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c: In function 'x_MbedTlsLogger':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c:170:5: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Note, ("MBEDTLS%d: %.*s", level, (int) len, message));
^~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c: In function 'x_ErrorToStatus':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c:250:5: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Trace, ("MBEDTLS error %d -> CONNECT MBEDTLS status %s",
^~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c: In function 'x_StatusToError':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c:292:9: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Trace, ("CONNECT MBEDTLS status %s -> %s %d",
^~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c: In function 's_MbedTlsCreate':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c:336:9: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Error,
^~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c: In function 's_MbedTlsInit':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c:611:9: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Critical,
^~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c:639:9: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(level, ("%s V%s (LogLevel=%d)",
^~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:218:33: warning: 'version' may be used uninitialized in this function [-Wmaybe-uninitialized]
_mess.message = NcbiMessagePlusError(&_mess.dynamic, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c:657:17: note: 'version' was declared here
const char* version;
^~~~~~~
all -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_userhost.cpp -o ncbi_userhost.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_session.cpp -o ncbi_http_session.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos_cxx.cpp -o ncbi_lbos_cxx.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_monkey.cpp -o ncbi_monkey.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c -o ncbi_gnutls.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c -o ncbi_mbedtls.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_tls.c:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connssl.h:47:25: warning: ISO C restricts enumerator values to range of 'int' [-Wpedantic]
eNcbiCred_MbedTls = 0xC12CC16C
^~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos_cxx.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_tls.c:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_tls.c: In function 's_NoTlsInit':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_tls.c:58:5: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "SSL has been explicitly disabled");
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_tls.c: In function 'x_SetupNoTls':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_tls.c:69:5: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Trace, "SSL has been explicitly disabled");
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_tls.c: In function 'NcbiSetupTls':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_tls.c:91:17: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Critical, ("Unknown TLS provider \"%s\"", str));
^~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_tls.c:95:13: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "No TLS support included in this build");
^~~~~~~~
.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/html/components.cpp -o components.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/html/commentdiag.cpp -o commentdiag.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/html/indentstream.cpp -o indentstream.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/html/html_exception.cpp -o html_exception.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/html/writer_htmlenc.cpp -o writer_htmlenc.o
/bin/rm -f libxhtml.so .libxhtml.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxhtml.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC node.o html.o htmlhelper.o page.o pager.o selection.o components.o commentdiag.o indentstream.o html_exception.o writer_htmlenc.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxhtml.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxhtml.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libxhtml.so
/bin/ln -f .xhtml.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.xhtml.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/html'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/html'
cd util/compress/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=compress UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/compress/api TMPL=compress -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialdef.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/stdtypes.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/compress/compress.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/compress/stream.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/compress/api/streambuf.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/compress/api/stream.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/enumerated.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_safe_static.hpp:48,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/autoptrinfo.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/typeinfo.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/impl/ptrinfo.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/ptrinfo.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/compress/compress.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/compress/api/compress.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/compress/compress.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/compress/stream.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/compress/api/streambuf.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/compress/api/streambuf.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/compress/compress.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/compress/stream.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/compress/stream_util.hpp:49,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/compress/api/stream_util.cpp:31:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/compress/api/compress.cpp -o compress.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/compress/api/stream.cpp -o stream.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/compress/api/streambuf.cpp -o streambuf.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/compress/api/stream_util.cpp -o stream_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/compress/api/bzip2.cpp -o bzip2.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/compress/api/zlib.cpp -o zlib.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFEAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/typeref.cpp -o typeref.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/typemap.cpp -o typemap.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/stdtypes.cpp -o stdtypes.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/enumerated.cpp -o enumerated.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/ptrinfo.cpp -o ptrinfo.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/autoptrinfo.cpp -o autoptrinfo.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/continfo.cpp -o continfo.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/compress/compress.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/compress/stream.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/compress/bzip2.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/compress/api/bzip2.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/compress/api/lzo.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/compress/api/zlib.cpp:40:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/compress/reader_zlib.hpp:33,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/compress/api/reader_zlib.cpp:31:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/continfo.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/compress/api/reader_zlib.cpp: In destructor 'virtual ncbi::CNlmZipReader::~CNlmZipReader()':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/compress/api/reader_zlib.cpp:281:19: warning: enum constant in boolean context [-Wint-in-bool-context]
if ( m_Own && fOwnReader ) {
^~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/impl/stltypesimpl.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/stltypes.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/gene_info_reader/unit_test/gene_info_test.cpp -o gene_info_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie gene_info_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lgene_info -lxncbi -ldl -lm -lpthread -o gene_info_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f gene_info_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f gene_info_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/gene_info_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test'
cd cgi/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=cgi UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/cgi'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/cgi'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/cgi'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/cgi'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/cgi'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/cgi TMPL=cgi -w -j4 --jobserver-auth=7,8 all
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/run_with_lock: Adjusting base from make_cgi to make__cgi_common per /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/cgi/.#lock-map.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/compress/api/tar.cpp:475:13: warning: In the GNU C Library, "major" is defined
by <sys/sysmacros.h>. For historical compatibility, it is
currently defined by <sys/types.h> as well, but we plan to
remove this soon. To use "major", include <sys/sysmacros.h>
directly. If you did not intend to use a system-defined macro
"major", you should undefine it after including <sys/types.h>.
return major(m_Stat.st_rdev);
^~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/compress/api/tar.cpp:490:13: warning: In the GNU C Library, "minor" is defined
by <sys/sysmacros.h>. For historical compatibility, it is
currently defined by <sys/types.h> as well, but we plan to
remove this soon. To use "minor", include <sys/sysmacros.h>
directly. If you did not intend to use a system-defined macro
"minor", you should undefine it after including <sys/types.h>.
return minor(m_Stat.st_rdev);
^~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/compress/api/tar.cpp:2221:13: warning: In the GNU C Library, "makedev" is defined
by <sys/sysmacros.h>. For historical compatibility, it is
currently defined by <sys/types.h> as well, but we plan to
remove this soon. To use "makedev", include <sys/sysmacros.h>
directly. If you did not intend to use a system-defined macro
"makedev", you should undefine it after including <sys/types.h>.
m_Current.m_Stat.st_rdev = makedev((unsigned int) val, usum);
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/memberid.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/request_ctx.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/cgi/ncbicgir.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/cgi/cgiapp.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/compress/api/archive_.cpp:87:13: warning: In the GNU C Library, "major" is defined
by <sys/sysmacros.h>. For historical compatibility, it is
currently defined by <sys/types.h> as well, but we plan to
remove this soon. To use "major", include <sys/sysmacros.h>
directly. If you did not intend to use a system-defined macro
"major", you should undefine it after including <sys/types.h>.
return major(m_Stat.st_rdev);
^~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/compress/api/archive_.cpp:103:13: warning: In the GNU C Library, "minor" is defined
by <sys/sysmacros.h>. For historical compatibility, it is
currently defined by <sys/types.h> as well, but we plan to
remove this soon. To use "minor", include <sys/sysmacros.h>
directly. If you did not intend to use a system-defined macro
"minor", you should undefine it after including <sys/types.h>.
return minor(m_Stat.st_rdev);
^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/compress/api/tar.cpp:52:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/cgi/ncbicgi.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/cgi/cgictx.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/memberlist.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/compress/api/archive.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/compress/archive_.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/compress/api/archive_.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/item.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/cgi/cgiapp.cpp: In member function 'bool ncbi::CCgiApplication::x_ProcessVersionRequest()':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/cgi/cgiapp.cpp:1891:12: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=]
catch (CStringException) {
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/cgi/ncbicgi.cpp: In member function 'void ncbi::CCgiRequest::GetCGIEntries(ncbi::CEntryCollector_Base&) const':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/cgi/ncbicgi.cpp:1648:16: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=]
catch (CStringException) {
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/cgi/ncbicgi.cpp: In member function 'ncbi::CStringUTF8 ncbi::CCgiEntry::GetValueAsUTF8(ncbi::CCgiEntry::EOnCharsetError) const':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/cgi/ncbicgi.cpp:1905:12: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=]
catch (CException) {
^~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/classinfob.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/connect/ncbi_tls.c -o ncbi_tls.o
/bin/rm -f libxconnect.so .libxconnect.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxconnect.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC ncbi_lbsmd_stub.o ncbi_ansi_ext.o ncbi_buffer.o ncbi_types.o ncbi_priv.o ncbi_core.o ncbi_util.o ncbi_socket.o ncbi_connutil.o ncbi_connection.o ncbi_connector.o ncbi_socket_connector.o ncbi_file_connector.o ncbi_http_connector.o ncbi_memory_connector.o ncbi_heapmgr.o ncbi_server_info.o ncbi_service.o ncbi_host_info.o ncbi_dispd.o ncbi_service_connector.o ncbi_sendmail.o ncbi_ftp_connector.o ncbi_lb.o ncbi_local.o ncbi_base64.o ncbi_version.o ncbi_lbos.o ncbi_namerd.o parson.o ncbi_ipv6.o ncbi_iprange.o ncbi_localip.o ncbi_socket_cxx.o ncbi_core_cxx.o email_diag_handler.o ncbi_conn_streambuf.o ncbi_conn_stream.o ncbi_conn_test.o ncbi_misc.o ncbi_namedpipe.o ncbi_namedpipe_connector.o ncbi_pipe.o ncbi_pipe_connector.o ncbi_conn_reader_writer.o ncbi_userhost.o ncbi_http_session.o ncbi_lbos_cxx.o ncbi_monkey.o ncbi_gnutls.o ncbi_mbedtls.o ncbi_tls.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lxncbi -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxconnect.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxconnect.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libxconnect.so
/bin/ln -f .xconnect.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.xconnect.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
cd algo/blast/core/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blast UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core TMPL=blast -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_engine.c: In function 'BLAST_PreliminarySearchEngine':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_engine.c:1490:9: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
(T_MB_IdbCheckOid)lookup_wrap->check_index_oid;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_engine.c:1628:22: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
((T_MB_IdxEndSearchIndication)(
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_engine.c:1715:10: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
((T_MB_IdxEndSearchIndication)(
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/aa_ungapped.c: In function 's_BlastAaWordFinder_TwoHit':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/aa_ungapped.c:484:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TAaScanSubjectFunction)(lookup->scansub_callback);
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/aa_ungapped.c:491:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TAaScanSubjectFunction)(lookup->scansub_callback);
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/aa_ungapped.c: In function 's_BlastAaWordFinder_OneHit':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/aa_ungapped.c:751:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TAaScanSubjectFunction)(lookup->scansub_callback);
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/aa_ungapped.c:758:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TAaScanSubjectFunction)(lookup->scansub_callback);
^
URCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/stltypes.cpp -o stltypes.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/memberid.cpp -o memberid.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/memberlist.cpp -o memberlist.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/item.cpp -o item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/classinfob.cpp -o classinfob.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/member.cpp -o member.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/classinfo.cpp -o classinfo.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-comake[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core'
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/aa_ungapped.c -o aa_ungapped.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_diagnostics.c -o blast_diagnostics.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_engine.c -o blast_engine.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_extend.c -o blast_extend.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_filter.c -o blast_filter.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_gapalign.c -o blast_gapalign.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/buiIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/member.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/classinfo.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/variant.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/compress/compress.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/compress/stream.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/compress/zlib.hpp:54,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/compress/api/archive_zip.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ld/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_hits.c -o blast_hits.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_hspstream.c -o blast_hspstream.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_itree.c -o blast_itree.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_kappa.c -o blast_kappa.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_lookup.c -o blast_lookup.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_aalookup.c -o blast_aalookup.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFI/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_aascan.c: In function 'BlastChooseProteinScanSubject':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_aascan.c:567:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lut->scansub_callback = (void *)s_BlastAaScanSubject;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_aascan.c:570:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lut->scansub_callback = (void *)s_BlastSmallAaScanSubject;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_aascan.c:575:33: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lut->scansub_callback = (void *)s_BlastCompressedAaScanSubject;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nalookup.c: In function 'BlastNaHashLookupTableNew':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nalookup.c:2225:27: warning: ISO C forbids assignment between function pointer and 'void *' [-Wpedantic]
lookup->hash_callback = FNV_hash;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nalookup.c:2284:49: warning: ISO C forbids passing argument 8 of 'BlastHashLookupIndexQueryExactMatches' between function pointer and 'void *' [-Wpedantic]
lookup->hash_callback,
~~~~~~^~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/core/blast_nalookup.h:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nalookup.c:31:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/core/blast_lookup.h:181:66: note: expected 'TNaLookupHashFunction' {aka 'unsigned int (*)(unsigned char *, unsigned int)'} but argument is of type 'void *'
TNaLookupHashFunction hash_func,
~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c: In function 's_NaChooseScanSubject':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:291:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastNaScanSubject_8_4;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:293:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastNaScanSubject_Any;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c: In function 's_SmallNaChooseScanSubject':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1320:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_4_1;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1322:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_Any;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1327:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_5_1;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1329:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_Any;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1334:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_6_1;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1336:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_6_2;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1338:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_Any;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1343:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_7_1;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1345:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_7_2;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1347:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_7_3;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1349:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_Any;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1354:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_8_4;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1360:33: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
(void *)s_BlastSmallNaScanSubject_Any;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1364:33: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
(void *)s_BlastSmallNaScanSubject_8_1Mod4;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1368:33: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
(void *)s_BlastSmallNaScanSubject_8_2Mod4;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1372:33: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
(void *)s_BlastSmallNaScanSubject_8_3Mod4;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c: In function 's_MBChooseScanSubject':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2620:24: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
(void *)s_MB_DiscWordScanSubject_TwoTemplates_1;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2622:39: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MB_DiscWordScanSubject_11_18_1;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2624:39: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MB_DiscWordScanSubject_11_21_1;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2626:39: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MB_DiscWordScanSubject_1;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2634:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MBScanSubject_9_1;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2636:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MBScanSubject_9_2;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2638:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MBScanSubject_Any;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2643:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MBScanSubject_10_1;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2645:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MBScanSubject_10_2;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2647:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MBScanSubject_10_3;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2649:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MBScanSubject_Any;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2655:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MBScanSubject_Any;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2658:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MBScanSubject_11_1Mod4;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2661:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MBScanSubject_11_2Mod4;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2664:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MBScanSubject_11_3Mod4;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2676:39: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MBScanSubject_Any;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c: In function 's_BlastNaHashLookupRetieveHits':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2705:9: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
(TNaLookupHashFunction)lookup->hash_callback;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c: In function 's_NaHashChooseScanSubject':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2978:32: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void*)s_BlastNaHashScanSubject_Any;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c: In function 'BlastChooseNucleotideScanSubjectAny':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2997:16: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
return (void *)s_BlastNaScanSubject_Any;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:3000:16: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
return (void *)s_BlastSmallNaScanSubject_Any;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:3003:16: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
return (void*)s_BlastNaHashScanSubject_Any;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:3006:12: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
return (void *)s_MBScanSubject_Any;
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/compress/api/archive_zip.cpp:45:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/compress/api/miniz/miniz.c: In function 'ncbi::tinfl_status ncbi::tinfl_decompress(ncbi::tinfl_decompressor*, const mz_uint8*, size_t*, ncbi::mz_uint8*, ncbi::mz_uint8*, size_t*, ncbi::mz_uint32)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/compress/api/miniz/miniz.c:1531:9: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
for ( i = 0; i <= 143; ++i) *p++ = 8; for ( ; i <= 255; ++i) *p++ = 9; for ( ; i <= 279; ++i) *p++ = 7; for ( ; i <= 287; ++i) *p++ = 8;
^~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/compress/api/miniz/miniz.c:1531:47: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
for ( i = 0; i <= 143; ++i) *p++ = 8; for ( ; i <= 255; ++i) *p++ = 9; for ( ; i <= 279; ++i) *p++ = 7; for ( ; i <= 287; ++i) *p++ = 8;
^~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/compress/api/miniz/miniz.c: In function 'void ncbi::tdefl_find_match(ncbi::tdefl_compressor*, ncbi::mz_uint, ncbi::mz_uint, ncbi::mz_uint, ncbi::mz_uint*, ncbi::mz_uint*)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/compress/api/miniz/miniz.c:2361:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!dist) break; p = s; q = d->m_dict + probe_pos; for (probe_len = 0; probe_len < max_match_len; probe_len++) if (*p++ != *q++) break;
^~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/compress/api/miniz/miniz.c:2361:23: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!dist) break; p = s; q = d->m_dict + probe_pos; for (probe_len = 0; probe_len < max_match_len; probe_len++) if (*p++ != *q++) break;
^
LE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_aascan.c -o blast_aascan.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nalookup.c -o blast_nalookup.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c -o blast_nascan.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_message.c -o blast_message.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_options.c -o blast_options.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_psi.c -o blast_psi.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-b/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c: In function 's_IsSeedMasked':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:488:15: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
return !(((T_Lookup_Callback)(lookup_wrap->lookup_callback))
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/impl/classinfob.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/impl/choice.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/choice.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c: In function 'BlastNaWordFinder':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1622:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TNaScanSubjectFunction)lookup->scansub_callback;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1623:18: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
extend = (TNaExtendFunction)lookup->extend_callback;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1635:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TNaScanSubjectFunction)lookup->scansub_callback;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1636:18: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
extend = (TNaExtendFunction)lookup->extend_callback;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1643:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TNaScanSubjectFunction)lookup->scansub_callback;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1644:18: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
extend = (TNaExtendFunction)lookup->extend_callback;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1657:23: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TNaScanSubjectFunction)
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c: In function 'MB_IndexedWordFinder':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1723:9: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
(T_MB_IdbCheckOid)lookup_wrap->check_index_oid;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1725:25: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
(T_MB_IdbGetResults)lookup_wrap->read_indexed_db;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c: In function 'BlastChooseNaExtend':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1795:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup_wrap->lookup_callback = (void *)s_MBLookup;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1799:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lut->extend_callback = (void *)s_BlastNaExtendDirect;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1802:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lut->extend_callback = (void *)s_BlastNaExtendAligned;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1804:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lut->extend_callback = (void *)s_BlastNaExtend;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1808:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup_wrap->lookup_callback = (void *)s_SmallNaLookup;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1812:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lut->extend_callback = (void *)s_BlastNaExtendDirect;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1816:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lut->extend_callback = (void *)s_BlastSmallNaExtendAlignedOneByte;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1818:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lut->extend_callback = (void *)s_BlastSmallNaExtend;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1825:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup_wrap->lookup_callback = (void *)s_NaLookup;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1829:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lut->extend_callback = (void *)s_BlastNaExtendDirect;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1832:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lut->extend_callback = (void *)s_BlastNaExtendAligned;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1834:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lut->extend_callback = (void *)s_BlastNaExtend;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c: In function 'JumperNaWordFinder':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1974:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TNaScanSubjectFunction)lookup->scansub_callback;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1986:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TNaScanSubjectFunction)lookup->scansub_callback;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1994:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TNaScanSubjectFunction)lookup->scansub_callback;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:2001:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TNaScanSubjectFunction)lookup->scansub_callback;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:2014:23: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TNaScanSubjectFunction)
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c: In function 'ShortRead_IndexedWordFinder':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:2188:9: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
(T_MB_IdbCheckOid)lookup_wrap->check_index_oid;
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:2190:25: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
(T_MB_IdbGetResults)lookup_wrap->read_indexed_db;
^
last+-2.7.1/c++/src/algo/blast/core/na_ungapped.c -o na_ungapped.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_psi_priv.c -o blast_psi_priv.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_seg.c -o blast_seg.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_seqsrc.c -o blast_seqsrc.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_setup.c -o blast_setup.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_stat.c -o blast_stat.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_traceback.c -o blast_traceback.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_safe_static.hpp:48,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/choiceptr.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_util.c: In function 'BlastProgram2Number':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_util.c:306:10: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
else if (strcasecmp("mapper", program) == 0)
^~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_util.c:309:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
return 0;
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/typeinfo.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/impl/ptrinfo.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/impl/aliasinfo.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/aliasinfo.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/cgi/ncbires.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/objistr.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
r/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_util.c -o blast_util.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/gapinfo.c -o gapinfo.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/greedy_align.c -o greedy_align.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/hspfilter_collector.c -o hspfilter_collector.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/hspfilter_besthit.c -o hspfilter_besthit.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/hspfilter_culling.c -o hspfilter_culling.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIF/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/link_hsps.c: In function 's_FwdCompareHSPs':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/link_hsps.c:133:10: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
else if (h1->context > h2->context)
^~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/link_hsps.c:136:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (h1->query.offset < h2->query.offset)
^~
Y_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/link_hsps.c -o link_hsps.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/lookup_util.c -o lookup_util.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/lookup_wrap.c -o lookup_wrap.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/matrix_freq_ratios.c -o matrix_freq_ratios.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/ncbi_std.c -o ncbi_std.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/ncbi_math.c -o ncbi_math.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_encodiIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/objostr.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mpile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/variant.cpp -o variant.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/choice.cpp -o choice.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/choiceptr.cpp -o choiceptr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/aliasinfo.cpp -o aliasinfo.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/objistr.cpp -o objistr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/objostr.cpp -o objostr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/objcopy.cpp -o objcopy.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ng.c -o blast_encoding.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/pattern.c -o pattern.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/phi_extend.c -o phi_extend.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/phi_gapalign.c -o phi_gapalign.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/phi_lookup.c -o phi_lookup.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_parameters.c -o blast_parameters.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_posit.c -o blast_posit.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/cgi/ref_args.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/cgi/ref_args.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_program.c -o blast_program.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_query_info.c -o blast_query_info.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_tune.c -o blast_tune.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_sw.c -o blast_sw.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_dynarray.c -o blast_dynarray.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/split_query.c -o split_query.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/cgi'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/cgi/ncbicgi.cpp -o ncbicgi.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/cgi/cgiapp.cpp -o cgiapp.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/cgi/cgictx.cpp -o cgictx.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/cgi/ncbicgir.cpp -o ncbicgir.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/cgi/ncbires.cpp -o ncbires.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/cgi/ref_args.cpp -o ref_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/gencode_singleton.c -o gencode_singleton.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/index_ungapped.c -o index_ungapped.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_traceback_mt_priv.c -o blast_traceback_mt_priv.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_hspstream_mt_utils.c -o blast_hspstream_mt_utils.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/boost_erf.c -o boost_erf.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/jumper.c -o jumper.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/hspfilter_mapper.c -o hspfilteIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/objcopy.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/iterator.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/cgi/cgiapp.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/cgi/cgi_run.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_url.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/ncbi_url.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/cgi/cgi_util.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/cgi/cgi_util.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
r_mapper.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/core/spliced_hits.c -o spliced_hits.o
/bin/rm -f libblast.so .libblast.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libblast.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC aa_ungapped.o blast_diagnostics.o blast_engine.o blast_extend.o blast_filter.o blast_gapalign.o blast_hits.o blast_hspstream.o blast_itree.o blast_kappa.o blast_lookup.o blast_aalookup.o blast_aascan.o blast_nalookup.o blast_nascan.o blast_message.o blast_options.o blast_psi.o na_ungapped.o blast_psi_priv.o blast_seg.o blast_seqsrc.o blast_setup.o blast_stat.o blast_traceback.o blast_util.o gapinfo.o greedy_align.o hspfilter_collector.o hspfilter_besthit.o hspfilter_culling.o link_hsps.o lookup_util.o lookup_wrap.o matrix_freq_ratios.o ncbi_std.o ncbi_math.o blast_encoding.o pattern.o phi_extend.o phi_gapalign.o phi_lookup.o blast_parameters.o blast_posit.o blast_program.o blast_query_info.o blast_tune.o blast_sw.o blast_dynarray.o split_query.o gencode_singleton.o index_ungapped.o blast_traceback_mt_priv.o blast_hspstream_mt_utils.o boost_erf.o jumper.o hspfilter_mapper.o spliced_hits.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lcomposition_adjustment -lxconnect -ltables -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libblast.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libblast.so
/bin/ln -f .blast.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.blast.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core'
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/cgi/cgi_serial.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/cgi/cgi_session.cpp:32:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/serial.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/cgi/cgi_exception.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/cgi/cgi_exception.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/plugin_manager.hpp:70,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/plugin_manager_store.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/cgi/cgiapp_cached.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/delaybuf.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/cgi/cgi_run.cpp -o cgi_run.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/cgi/cgi_util.cpp -o cgi_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/cgi/cgi_serial.cpp -o cgi_serial.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/cgi/cgi_session.cpp -o cgi_session.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/cgi/cgi_exception.cpp -o cgi_exception.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/cgi/cgiapp_cached.cpp -o cgiapp_cached.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/cgi/cgi_entry_reader.cpp -o cgi_entry_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialdef.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/objhook.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/pack_string.hpp:33,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/pack_string.cpp:32:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/stream_utils.hpp:45,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/cgi/ncbicgi.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/cgi/impl/cgi_entry_reader.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/cgi/cgi_entry_reader.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/version.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/cgi/user_agent.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/cgi/user_agent.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/exception.hpp:34,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/exception.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/objhook.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/iterator.cpp -o iterator.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/serial.cpp -o serial.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/delaybuf.cpp -o delaybuf.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/pack_string.cpp -o pack_string.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/exception.cpp -o exception.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/objhook.cpp -o objhook.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/oIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/objlist.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/objstack.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/objostrasn.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/objistrasn.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/objostrasnb.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/objistrasnb.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/cgi/user_agent.cpp -o user_agent.o
/bin/rm -f libxcgi.so .libxcgi.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxcgi.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC ncbicgi.o cgiapp.o cgictx.o ncbicgir.o ncbires.o ref_args.o cgi_run.o cgi_util.o cgi_serial.o cgi_session.o cgi_exception.o cgiapp_cached.o cgi_entry_reader.o user_agent.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcgi.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxcgi.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libxcgi.so
/bin/ln -f .xcgi.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.xcgi.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/cgi'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/cgi'
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/objostrxml.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/objistrasnb.cpp:34:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long int&}; _Tp = long long int; _Alloc = std::allocator<long long int>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<long long int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/objistrasnb.cpp:34:
/usr/include/c++/8/bits/stl_vector.h: In member function 'void ncbi::CObjectIStreamAsnBinary::ExpectIndefiniteLength()':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
bjlist.cpp -o objlist.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/objstack.cpp -o objstack.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/objostrasn.cpp -o objostrasn.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/objistrasn.cpp -o objistrasn.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/objostrasnb.cpp -o objostrasnb.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/objistrasnb.cpp -o objistrasnb.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/objostrxml.cpp -o objostrxml.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUIILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/compress/api/lzo.cpp -o lzo.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/compress/api/reader_zlib.cpp -o reader_zlib.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/compress/api/tar.cpp -o tar.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/compress/api/archive.cpp -o archive.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/compress/api/archive_.cpp -o archive_.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/compress/api/archive_zip.cpp -o archive_zip.o
/bin/rm -f libxcompress.so .libxcompress.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxcompress.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC compress.o stream.o streambuf.o stream_util.o bzip2.o zlib.o lzo.o reader_zlib.o tar.o archive.o archive_.o archive_zip.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lxutil -lxncbi -lbz2 -lz -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcompress.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxcompress.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libxcompress.so
/bin/ln -f .xcompress.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.xcompress.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api'
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/objistrxml.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/objostrjson.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/objistrjson.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serializable.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/serializable.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_safe_static.hpp:48,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/serialobject.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/impl/pathhook.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/pathhook.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/rpcbase.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
LD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/objistrxml.cpp -o objistrxml.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/objostrjson.cpp -o objostrjson.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/objistrjson.cpp -o objistrjson.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/serializable.cpp -o serializable.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/serialobject.cpp -o serialobject.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/pathhook.cpp -o pathhook.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/rpcbase.cpp -o rpcbase.o
/bin/rm -f libxser.so .libxser.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxser.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC hookdata.o hookdatakey.o typeinfo.o objectinfo.o objectiter.o objectio.o typeref.o typemap.o stdtypes.o enumerated.o ptrinfo.o autoptrinfo.o continfo.o stltypes.o memberid.o memberlist.o item.o classinfob.o member.o classinfo.o variant.o choice.o choiceptr.o aliasinfo.o objistr.o objostr.o objcopy.o iterator.o serial.o delaybuf.o pack_string.o exception.o objhook.o objlist.o objstack.o objostrasn.o objistrasn.o objostrasnb.o objistrasnb.o objostrxml.o objistrxml.o objostrjson.o objistrjson.o serializable.o serialobject.o pathhook.o rpcbase.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxser.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxser.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libxser.so
/bin/ln -f .xser.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.xser.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/serial'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/serial'
cd serial/datatool/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=datatool LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/serial/datatool'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/serial/datatool'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/serial/datatool'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/serial/datatool'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/serial/datatool'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool TMPL=datatool -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/namespace.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/type.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/type.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/statictype.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/statictype.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/datatool.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/type.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/type.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/datatool.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/type.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/enumtype.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/enumtype.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/serial/datatool'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/datatool.cpp -o datatool.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/type.cpp -o type.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/namespace.cpp -o namespace.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/statictype.cpp -o statictype.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/enumtype.cpp -o enumtype.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/reftype.cpp -o reftype.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/type.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/reftype.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/reftype.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/type.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/reftype.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/reftype.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/impl/stltypes.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/unitype.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/impl/stltypes.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/unitype.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/blocktype.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/blocktype.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/choicetype.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/choicetype.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/typestr.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/typestr.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/typestr.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/ptrstr.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/ptrstr.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/typestr.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/stdstr.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/stdstr.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
IFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/unitype.cpp -o unitype.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/blocktype.cpp -o blocktype.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/choicetype.cpp -o choicetype.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/typestr.cpp -o typestr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/ptrstr.cpp -o ptrstr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/stdstr.cpp -o stdstr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/classstr.cpp -o classstr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstaIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/datatool.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/classstr.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/typestr.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/enumstr.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/enumstr.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/datatool.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/classstr.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/stlstr.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/stlstr.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/choicestr.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/choicestr.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/choiceptrstr.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/value.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/value.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/mcontainer.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/mcontainer.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ck-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/enumstr.cpp -o enumstr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/stlstr.cpp -o stlstr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/choicestr.cpp -o choicestr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/choiceptrstr.cpp -o choiceptrstr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/value.cpp -o value.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/mcontainer.cpp -o mcontainer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/module.cpp -o module.o
/usr/bin/g++ -std=gnu++11 -c -WaIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/module.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/moduleset.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/module.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/generate.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/moduleset.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/filecode.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/filecode.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/generate.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/code.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/code.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/fileutil.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ll -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/moduleset.cpp -o moduleset.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/generate.cpp -o generate.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/filecode.cpp -o filecode.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/code.cpp -o code.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/fileutil.cpp -o fileutil.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/alexer.cpp -o alexer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/alexer.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/alexer.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/aparser.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/aparser.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/parser.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/parser.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/alexer.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/lexer.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/lexer.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.cpp:66:50: note: in expansion of macro 'THROWS'
CDataType* CResolvedTypeSet::GetType(void) const THROWS((CDatatoolException))
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/comments.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/aparser.cpp -o aparser.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/parser.cpp -o parser.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/lexer.cpp -o lexer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.cpp -o exceptions.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/comments.cpp -o comments.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/srcutil.cpp -o srcutil.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/dtdaux.cpp -o dtdaux.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/srcutil.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/dtdaux.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/dtdaux.cpp:38:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/alexer.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/dtdlexer.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/dtdlexer.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/dtdparser.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/dtdparser.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/rpcgen.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/rpcgen.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/aliasstr.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/aliasstr.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/alexer.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/dtdlexer.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/xsdlexer.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/xsdlexer.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/xsdparser.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
IFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/dtdlexer.cpp -o dtdlexer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/dtdparser.cpp -o dtdparser.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/rpcgen.cpp -o rpcgen.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/aliasstr.cpp -o aliasstr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/xsdlexer.cpp -o xsdlexer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/xsdparser.cpp -o xsdparser.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/wsdllexer.cpp -o wsdllexer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.speIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/xsdparser.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/alexer.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/dtdlexer.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/xsdlexer.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/wsdllexer.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/wsdllexer.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/wsdlparser.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/wsdlparser.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/wsdlstr.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/wsdlstr.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/alexer.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/dtdlexer.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/jsdlexer.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/jsdlexer.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/jsdparser.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/jsdparser.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/traversal_pattern_match_callback.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/traversal_pattern_match_callback.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/traversal_code_generator.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/wsdlparser.cpp -o wsdlparser.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/wsdlstr.cpp -o wsdlstr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/jsdlexer.cpp -o jsdlexer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/jsdparser.cpp -o jsdparser.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/traversal_pattern_match_callback.cpp -o traversal_pattern_match_callback.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/traversal_code_generator.cpp -o traversal_code_generator.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blastIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/traversal_node.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/traversal_merger.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/traversal_merger.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/typestr.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/aliasstr.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/traversal_node.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/traversal_spec_file_parser.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/traversal_spec_file_parser.cpp:187:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+-2.7.1/c++/src/serial/datatool/traversal_merger.cpp -o traversal_merger.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/traversal_node.cpp -o traversal_node.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/serial/datatool/traversal_spec_file_parser.cpp -o traversal_spec_file_parser.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie datatool.o type.o namespace.o statictype.o enumtype.o reftype.o unitype.o blocktype.o choicetype.o typestr.o ptrstr.o stdstr.o classstr.o enumstr.o stlstr.o choicestr.o choiceptrstr.o value.o mcontainer.o module.o moduleset.o generate.o filecode.o code.o fileutil.o alexer.o aparser.o parser.o lexer.o exceptions.o comments.o srcutil.o dtdaux.o dtdlexer.o dtdparser.o rpcgen.o aliasstr.o xsdlexer.o xsdparser.o wsdllexer.o wsdlparser.o wsdlstr.o jsdlexer.o jsdparser.o traversal_pattern_match_callback.o traversal_code_generator.o traversal_merger.o traversal_node.o traversal_spec_file_parser.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lxser -lxutil -lxncbi -ldl -lm -lpthread -o datatool
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f datatool /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f datatool /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/serial/datatool'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/serial/datatool'
cd objects/general/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
cd objects/biblio/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
cd objects/medline/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
cd objects/pub/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
cd /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/biblio && /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh biblio all
cd /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/general && /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh general all
cd /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/medline && /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh medline all
cd /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/pub && /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh pub all
Platform not defined for Linux armv8l -- please fix me
Platform not defined for Linux armv8l -- please fix me
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
Platform not defined for Linux armv8l -- please fix me
Platform not defined for Linux armv8l -- please fix me
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=pub MODULE_PATH=objects/pub MODULE_ASN=pub.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline' IMPDEPS='/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/pub'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m pub.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn" -oA -oc pub -or objects/pub -odi -od pub.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd pub.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/pub'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/pub'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=medline MODULE_PATH=objects/medline MODULE_ASN=medline.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio' IMPDEPS='/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/medline'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m medline.asn -M "objects/general/general.asn objects/biblio/biblio.asn" -oA -oc medline -or objects/medline -odi -od medline.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd medline.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/medline'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/medline'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/pub'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/medline'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=general MODULE_PATH=objects/general MODULE_ASN=general.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/general'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m general.asn -M "" -oA -oc general -or objects/general -odi -od general.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd general.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/general'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/general'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/general'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline'
/usr/bin/make[4] (Makefile.pub.lib): Nothing to be done for `export-headers'.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.medline.lib): Nothing to be done for `export-headers'.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general'
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=biblio MODULE_PATH=objects/biblio MODULE_ASN=biblio.asn MODULE_IMPORT='objects/general/general' IMPDEPS='/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn' IMPFILES='objects/general/general.asn' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/biblio'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m biblio.asn -M "objects/general/general.asn" -oA -oc biblio -or objects/biblio -odi -od biblio.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd biblio.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/biblio'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/biblio'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/biblio'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.general.lib): Nothing to be done for `export-headers'.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio'
/usr/bin/make[4] (Makefile.biblio.lib): Nothing to be done for `export-headers'.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=biblio MODULE_PATH=objects/biblio MODULE_ASN=biblio.asn MODULE_IMPORT='objects/general/general' IMPDEPS='/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn' IMPFILES='objects/general/general.asn' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/biblio'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m biblio.asn -M "objects/general/general.asn" -oA -oc biblio -or objects/biblio -odi -od biblio.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd biblio.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/biblio'
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=medline MODULE_PATH=objects/medline MODULE_ASN=medline.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio' IMPDEPS='/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/medline'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m medline.asn -M "objects/general/general.asn objects/biblio/biblio.asn" -oA -oc medline -or objects/medline -odi -od medline.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd medline.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/medline'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline'
cd objects/seqcode/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
cd objects/seq/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=pub MODULE_PATH=objects/pub MODULE_ASN=pub.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline' IMPDEPS='/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/pub'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m pub.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn" -oA -oc pub -or objects/pub -odi -od pub.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd pub.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/pub'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub'
cd objects/seqset/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=general MODULE_PATH=objects/general MODULE_ASN=general.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/general'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m general.asn -M "" -oA -oc general -or objects/general -odi -od general.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd general.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/general'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general'
cd objects/scoremat/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
cd /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqcode && /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh seqcode all
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
cd /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqset && /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh seqset all
cd /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/scoremat && /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh scoremat all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
make[6]: warning: -j4 forced in submake: resetting jobserver mode.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
make[6]: warning: -j4 forced in submake: resetting jobserver mode.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/Makefile.sources builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq -w -j4 --jobserver-auth=9,10 all
Platform not defined for Linux armv8l -- please fix me
make[6]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
Platform not defined for Linux armv8l -- please fix me
Platform not defined for Linux armv8l -- please fix me
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqcode MODULE_PATH=objects/seqcode MODULE_ASN=seqcode.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqcode'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m seqcode.asn -M "" -oA -oc seqcode -or objects/seqcode -odi -od seqcode.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqcode.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqcode'
Platform not defined for Linux armv8l -- please fix me
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqcode'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqcode'
make[7]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode'
/usr/bin/make[4] (Makefile.seqcode.lib): Nothing to be done for `export-headers'.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=scoremat MODULE_PATH=objects/scoremat MODULE_ASN=scoremat.asn MODULE_IMPORT='objects/seqset/seqset objects/general/general' IMPDEPS='/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn' IMPFILES='objects/seqset/seqset.asn objects/general/general.asn' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/scoremat'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m scoremat.asn -M "objects/seqset/seqset.asn objects/general/general.asn" -oA -oc scoremat -or objects/scoremat -odi -od scoremat.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd scoremat.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/scoremat'
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqset MODULE_PATH=objects/seqset MODULE_ASN=seqset.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seq/seq' IMPDEPS='/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqset'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m seqset.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seq/seq.asn" -oA -oc seqset -or objects/seqset -odi -od seqset.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqset.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqset'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/scoremat'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqset'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/scoremat'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqset'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset'
/usr/bin/make[4] (Makefile.scoremat.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.seqset.lib): Nothing to be done for `export-headers'.
Platform not defined for Linux armv8l -- please fix me
make[7]: warning: -j4 forced in submake: resetting jobserver mode.
Platform not defined for Linux armv8l -- please fix me
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
status=0 ; \
MAKE="/usr/bin/make -w -j4 --jobserver-auth=12,14"; \
export MAKE; \
for x in seqalign seqblock seqfeat seqloc seqres seqtable; do \
d=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../$x ; \
(cd $d && /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh) || status=9 ; \
test -f ${x}__.cpp || \
echo "#include \"../$x/${x}__.cpp\"" > ${x}__.cpp ; \
test -f ${x}___.cpp || \
echo "#include \"../$x/${x}___.cpp\"" > ${x}___.cpp ; \
done ; \
exit $status
/usr/bin/make -w -j4 --jobserver-auth=12,14 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqalign MODULE_PATH=objects/seqalign MODULE_ASN=seqalign.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src
make[7]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqalign'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m seqalign.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn" -oA -oc seqalign -or objects/seqalign -odi -od seqalign.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqalign.dump
datatool: 2.17.0
make[7]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqalign'
/usr/bin/make -w -j4 --jobserver-auth=12,14 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqblock MODULE_PATH=objects/seqblock MODULE_ASN=seqblock.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src
make[7]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqblock'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m seqblock.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn" -oA -oc seqblock -or objects/seqblock -odi -od seqblock.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqblock.dump
datatool: 2.17.0
make[7]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqblock'
/usr/bin/make -w -j4 --jobserver-auth=12,14 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqfeat MODUmake[7]: warning: -j4 forced in submake: resetting jobserver mode.
Platform not defined for Linux armv8l -- please fix me
make[7]: warning: -j4 forced in submake: resetting jobserver mode.
Platform not defined for Linux armv8l -- please fix me
LE_PATH=objects/seqfeat MODULE_ASN=seqfeat.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/pub/pub objects/seqloc/seqloc objects/seq/seq' IMPDEPS='/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/pub/pub.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/pub/pub.asn objects/seqloc/seqloc.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src
make[7]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqfeat'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m seqfeat.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/pub/pub.asn objects/seqloc/seqloc.asn objects/seq/seq.asn" -oA -oc seqfeat -or objects/seqfeat -odi -od seqfeat.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqfeat.dump
datatool: 2.17.0
make[7]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqfeat'
/usr/bin/make -w -j4 --jobserver-auth=12,14 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqloc MODULE_PATH=objects/seqloc MODULE_ASN=seqloc.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/seqfeat/seqfeat' IMPDEPS='/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/seqfeat/seqfeat.asn' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src
make[7]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqloc'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m seqloc.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/seqfeat/seqfeat.asn" -oA -oc seqloc -or objects/seqloc -odi -od seqloc.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqloc.dump
datatool: 2.17.0
make[7]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqloc'
/usr/bin/make -w -j4 --jobserver-auth=12,14 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqres MODULE_PATH=objects/seqres MODULE_ASN=seqres.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILDmake[7]: warning: -j4 forced in submake: resetting jobserver mode.
Platform not defined for Linux armv8l -- please fix me
make[7]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqcode MODULE_PATH=objects/seqcode MODULE_ASN=seqcode.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqcode'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m seqcode.asn -M "" -oA -oc seqcode -or objects/seqcode -odi -od seqcode.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqcode.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqcode'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode'
cd objects/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=scoremat MODULE_PATH=objects/scoremat MODULE_ASN=scoremat.asn MODULE_IMPORT='objects/seqset/seqset objects/general/general' IMPDEPS='/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn' IMPFILES='objects/seqset/seqset.asn objects/general/general.asn' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/scoremat'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m scoremat.asn -M "objects/seqset/seqset.asn objects/general/general.asn" -oA -oc scoremat -or objects/scoremat -odi -od scoremat.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd scoremat.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/scoremat'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat'
cd /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blast && /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh blast all
cd objects/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqset MODULE_PATH=objects/seqset MODULE_ASN=seqset.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seq/seq' IMPDEPS='/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqset'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m seqset.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seq/seq.asn" -oA -oc seqset -or objects/seqset -odi -od seqset.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqset.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqset'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset'
cd objects/genomecoll/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
cd /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blastdb && /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh blastdb all
cd /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/genomecoll && /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh genome_collection all
Platform not defined for Linux armv8l -- please fix me
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
Platform not defined for Linux armv8l -- please fix me
Platform not defined for Linux armv8l -- please fix me
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=blastdb MODULE_PATH=objects/blastdb MODULE_ASN=blastdb.asn MODULE_IMPORT='objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blastdb'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m blastdb.asn -M "objects/seqloc/seqloc.asn" -oA -oc blastdb -or objects/blastdb -odi -od blastdb.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd blastdb.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blastdb'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blastdb'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb'
/usr/bin/make[4] (Makefile.blastdb.lib): Nothing to be done for `export-headers'.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=genome_collection MODULE_PATH=objects/genomecoll MODULE_ASN=genome_collection.asn MODULE_IMPORT='objects/general/general objects/seqloc/seqloc objects/seqfeat/seqfeat objects/seq/seq' IMPDEPS='/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/seqloc/seqloc.asn objects/seqfeat/seqfeat.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/genomecoll'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m genome_collection.asn -M "objects/general/general.asn objects/seqloc/seqloc.asn objects/seqfeat/seqfeat.asn objects/seq/seq.asn" -oA -oc genome_collection -or objects/genomecoll -odi -od genome_collection.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd genome_collection.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/genomecoll'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/genomecoll'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/genomecoll'
cd /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/genomecoll && /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh gencoll_client all
Waiting for /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/genomecoll/make_asn.lock/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=blast MODULE_PATH=objects/blast MODULE_ASN=blast.asn MODULE_IMPORT='objects/scoremat/scoremat objects/seq/seq objects/seqset/seqset objects/seqloc/seqloc objects/seqalign/seqalign' IMPDEPS='/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/scoremat/scoremat.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqalign/seqalign.asn' IMPFILES='objects/scoremat/scoremat.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn objects/seqalign/seqalign.asn' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blast'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m blast.asn -M "objects/scoremat/scoremat.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn objects/seqalign/seqalign.asn" -oA -oc blast -or objects/blast -odi -od blast.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd blast.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blast'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blast'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
/usr/bin/make[4] (Makefile.blast.lib): Nothing to be done for `export-headers'.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
/usr/bin/make[4] (Makefile.xnetblastcli.lib): Nothing to be done for `export-headers'.
/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src
make[7]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqres'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m seqres.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn" -oA -oc seqres -or objects/seqres -odi -od seqres.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqres.dump
datatool: 2.17.0
make[7]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqres'
/usr/bin/make -w -j4 --jobserver-auth=12,14 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqtable MODULE_PATH=objects/seqtable MODULE_ASN=seqtable.asn MODULE_IMPORT='objects/general/general objects/seq/seq objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/seq/seq.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src
make[7]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqtable'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m seqtable.asn -M "objects/general/general.asn objects/seq/seq.asn objects/seqloc/seqloc.asn" -oA -oc seqtable -or objects/seqtable -odi -od seqtable.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqtable.dump
datatool: 2.17.0
make[7]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqtable'
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
cd /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq && /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh seq all
Platform not defined for Linux armv8l -- please fix me
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seq MODULE_PATH=objects/seq MODULE_ASN=seq.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/pub/pub objects/medline/medline objects/seqloc/seqloc objects/seqblock/seqblock objects/seqalign/seqalign objects/seqfeat/seqfeat objects/seqres/seqres objects/seqtable/seqtable' IMPDEPS='/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/pub/pub.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqblock/seqblock.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqalign/seqalign.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqres/seqres.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqtable/seqtable.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/pub/pub.asn objects/medline/medline.asn objects/seqloc/seqloc.asn objects/seqblock/seqblock.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn objects/seqtable/seqtable.asn' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m seq.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/pub/pub.asn objects/medline/medline.asn objects/seqloc/seqloc.asn objects/seqblock/seqblock.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn objects/seqtable/seqtable.asn" -oA -oc seq -or objects/seq -odi -od seq.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seq.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
/usr/bin/make[4] (Makefile.seq.lib): Nothing to be done for `export-headers'.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=blast MODULE_PATH=objects/blast MODULE_ASN=blast.asn MODULE_IMPORT='objects/scoremat/scoremat objects/seq/seq objects/seqset/seqset objects/seqloc/seqloc objects/seqalign/seqalign' IMPDEPS='/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/scoremat/scoremat.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqalign/seqalign.asn' IMPFILES='objects/scoremat/scoremat.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn objects/seqalign/seqalign.asn' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blast'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m blast.asn -M "objects/scoremat/scoremat.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn objects/seqalign/seqalign.asn" -oA -oc blast -or objects/blast -odi -od blast.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd blast.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blast'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
cd objects/seqedit/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
cd /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqedit && /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh seqedit all
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=blastdb MODULE_PATH=objects/blastdb MODULE_ASN=blastdb.asn MODULE_IMPORT='objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blastdb'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m blastdb.asn -M "objects/seqloc/seqloc.asn" -oA -oc blastdb -or objects/blastdb -odi -od blastdb.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd blastdb.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blastdb'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb'
cd objects/seqsplit/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
cd /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqsplit && /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh seqsplit all
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=genome_collection MODULE_PATH=objects/genomecoll MODULE_ASN=genome_collection.asn MODULE_IMPORT='objects/general/general objects/seqloc/seqloc objects/seqfeat/seqfeat objects/seq/seq' IMPDEPS='/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/seqloc/seqloc.asn objects/seqfeat/seqfeat.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/genomecoll'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m genome_collection.asn -M "objects/general/general.asn objects/seqloc/seqloc.asn objects/seqfeat/seqfeat.asn objects/seq/seq.asn" -oA -oc genome_collection -or objects/genomecoll -odi -od genome_collection.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd genome_collection.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/genomecoll'
Platform not defined for Linux armv8l -- please fix me
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
Platform not defined for Linux armv8l -- please fix me
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqedit MODULE_PATH=objects/seqedit MODULE_ASN=seqedit.asn MODULE_IMPORT='objects/general/general objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq objects/seqalign/seqalign objects/seqfeat/seqfeat objects/seqres/seqres' IMPDEPS='/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqalign/seqalign.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqres/seqres.asn' IMPFILES='objects/general/general.asn objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqedit'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m seqedit.asn -M "objects/general/general.asn objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn" -oA -oc seqedit -or objects/seqedit -odi -od seqedit.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqedit.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqedit'
.make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqedit'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
Acquired /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/genomecoll/make_asn.lock for PID 15469 (make_asn)
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqsplit MODULE_PATH=objects/seqsplit MODULE_ASN=seqsplit.asn MODULE_IMPORT='objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq objects/seqalign/seqalign objects/seqfeat/seqfeat' IMPDEPS='/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqalign/seqalign.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqsplit'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m seqsplit.asn -M "objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn" -oA -oc seqsplit -or objects/seqsplit -odi -od seqsplit.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqsplit.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqsplit'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqedit'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqsplit'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqsplit'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit'
/usr/bin/make[4] (Makefile.seqedit.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.seqsplit.lib): Nothing to be done for `export-headers'.
Platform not defined for Linux armv8l -- please fix me
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=gencoll_client MODULE_PATH=objects/genomecoll MODULE_ASN=gencoll_client.asn MODULE_IMPORT='objects/genomecoll/genome_collection' IMPDEPS='/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/genomecoll/genome_collection.asn' IMPFILES='objects/genomecoll/genome_collection.asn' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/genomecoll'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m gencoll_client.asn -M "objects/genomecoll/genome_collection.asn" -oA -oc gencoll_client -or objects/genomecoll -odi -od gencoll_client.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd gencoll_client.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/genomecoll'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/genomecoll'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/genomecoll'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll'
/usr/bin/make[4] (Makefile.genome_collection.lib): Nothing to be done for `export-headers'.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll'
/usr/bin/make[4] (Makefile.gencoll_client.lib): Nothing to be done for `export-headers'.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seq MODULE_PATH=objects/seq MODULE_ASN=seq.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/pub/pub objects/medline/medline objects/seqloc/seqloc objects/seqblock/seqblock objects/seqalign/seqalign objects/seqfeat/seqfeat objects/seqres/seqres objects/seqtable/seqtable' IMPDEPS='/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/pub/pub.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqblock/seqblock.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqalign/seqalign.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqres/seqres.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqtable/seqtable.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/pub/pub.asn objects/medline/medline.asn objects/seqloc/seqloc.asn objects/seqblock/seqblock.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn objects/seqtable/seqtable.asn' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m seq.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/pub/pub.asn objects/medline/medline.asn objects/seqloc/seqloc.asn objects/seqblock/seqblock.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn objects/seqtable/seqtable.asn" -oA -oc seq -or objects/seq -odi -od seq.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seq.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
cd objects/submit/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
cd /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/submit && /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh submit all
Platform not defined for Linux armv8l -- please fix me
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=submit MODULE_PATH=objects/submit MODULE_ASN=submit.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/seq/seq objects/seqset/seqset objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/submit'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m submit.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn" -oA -oc submit -or objects/submit -odi -od submit.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd submit.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/submit'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/submit'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/submit'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit'
/usr/bin/make[4] (Makefile.submit.lib): Nothing to be done for `export-headers'.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqedit MODULE_PATH=objects/seqedit MODULE_ASN=seqedit.asn MODULE_IMPORT='objects/general/general objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq objects/seqalign/seqalign objects/seqfeat/seqfeat objects/seqres/seqres' IMPDEPS='/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqalign/seqalign.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqres/seqres.asn' IMPFILES='objects/general/general.asn objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqedit'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m seqedit.asn -M "objects/general/general.asn objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn" -oA -oc seqedit -or objects/seqedit -odi -od seqedit.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqedit.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqedit'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit'
cd objects/variation/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
cd /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/variation && /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh variation all
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqsplit MODULE_PATH=objects/seqsplit MODULE_ASN=seqsplit.asn MODULE_IMPORT='objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq objects/seqalign/seqalign objects/seqfeat/seqfeat' IMPDEPS='/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqalign/seqalign.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqsplit'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m seqsplit.asn -M "objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn" -oA -oc seqsplit -or objects/seqsplit -odi -od seqsplit.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqsplit.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqsplit'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit'
cd objects/id1/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
cd /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/id1 && /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh id1 all
Platform not defined for Linux armv8l -- please fix me
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
Platform not defined for Linux armv8l -- please fix me
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=variation MODULE_PATH=objects/variation MODULE_ASN=variation.asn MODULE_IMPORT='objects/seqfeat/seqfeat objects/general/general objects/seqloc/seqloc objects/pub/pub objects/seq/seq' IMPDEPS='/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/pub/pub.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn' IMPFILES='objects/seqfeat/seqfeat.asn objects/general/general.asn objects/seqloc/seqloc.asn objects/pub/pub.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/variation'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m variation.asn -M "objects/seqfeat/seqfeat.asn objects/general/general.asn objects/seqloc/seqloc.asn objects/pub/pub.asn objects/seq/seq.asn" -oA -oc variation -or objects/variation -odi -od variation.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd variation.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/variation'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/variation'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/variation'
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=id1 MODULE_PATH=objects/id1 MODULE_ASN=id1.asn MODULE_IMPORT='objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq' IMPDEPS='/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn' IMPFILES='objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/id1'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m id1.asn -M "objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn" -oA -oc id1 -or objects/id1 -odi -od id1.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd id1.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/id1'
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=gencoll_client MODULE_PATH=objects/genomecoll MODULE_ASN=gencoll_client.asn MODULE_IMPORT='objects/genomecoll/genome_collection' IMPDEPS='/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/genomecoll/genome_collection.asn' IMPFILES='objects/genomecoll/genome_collection.asn' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/genomecoll'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m gencoll_client.asn -M "objects/genomecoll/genome_collection.asn" -oA -oc gencoll_client -or objects/genomecoll -odi -od gencoll_client.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd gencoll_client.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/genomecoll'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll'
cd objects/id2/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/id1'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/id1'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1'
cd /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/id2 && /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh id2 all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1'
/usr/bin/make[4] (Makefile.variation.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.id1.lib): Nothing to be done for `export-headers'.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1'
/usr/bin/make[4] (Makefile.id1cli.lib): Nothing to be done for `export-headers'.
Platform not defined for Linux armv8l -- please fix me
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=id2 MODULE_PATH=objects/id2 MODULE_ASN=id2.asn MODULE_IMPORT='objects/seqsplit/seqsplit objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqsplit/seqsplit.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/seqsplit/seqsplit.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/id2'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m id2.asn -M "objects/seqsplit/seqsplit.asn objects/seqloc/seqloc.asn" -oA -oc id2 -or objects/id2 -odi -od id2.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd id2.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/id2'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/id2'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/id2'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2'
/usr/bin/make[4] (Makefile.id2.lib): Nothing to be done for `export-headers'.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2'
/usr/bin/make[4] (Makefile.id2cli.lib): Nothing to be done for `export-headers'.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=submit MODULE_PATH=objects/submit MODULE_ASN=submit.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/seq/seq objects/seqset/seqset objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/submit'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m submit.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn" -oA -oc submit -or objects/submit -odi -od submit.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd submit.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/submit'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit'
cd objects/taxon1/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
cd /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/taxon1 && /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh taxon1 all
Platform not defined for Linux armv8l -- please fix me
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=taxon1 MODULE_PATH=objects/taxon1 MODULE_ASN=taxon1.asn MODULE_IMPORT='objects/seqfeat/seqfeat' IMPDEPS='/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqfeat/seqfeat.asn' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/taxon1'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m taxon1.asn -M "objects/seqfeat/seqfeat.asn" -oA -oc taxon1 -or objects/taxon1 -odi -od taxon1.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd taxon1.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/taxon1'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/taxon1'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/taxon1'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1'
/usr/bin/make[4] (Makefile.taxon1.lib): Nothing to be done for `export-headers'.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=variation MODULE_PATH=objects/variation MODULE_ASN=variation.asn MODULE_IMPORT='objects/seqfeat/seqfeat objects/general/general objects/seqloc/seqloc objects/pub/pub objects/seq/seq' IMPDEPS='/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/pub/pub.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn' IMPFILES='objects/seqfeat/seqfeat.asn objects/general/general.asn objects/seqloc/seqloc.asn objects/pub/pub.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/variation'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m variation.asn -M "objects/seqfeat/seqfeat.asn objects/general/general.asn objects/seqloc/seqloc.asn objects/pub/pub.asn objects/seq/seq.asn" -oA -oc variation -or objects/variation -odi -od variation.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd variation.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/variation'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation'
cd objects/blastxml/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
cd /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blastxml && /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh blastxml all
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=id1 MODULE_PATH=objects/id1 MODULE_ASN=id1.asn MODULE_IMPORT='objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq' IMPDEPS='/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn' IMPFILES='objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/id1'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m id1.asn -M "objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn" -oA -oc id1 -or objects/id1 -odi -od id1.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd id1.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/id1'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1'
cd objects/blastxml2/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
Platform not defined for Linux armv8l -- please fix me
cd /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blastxml2 && /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh blastxml2 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
Platform not defined for Linux armv8l -- please fix me
File blastxml.module not found. Using defaults...
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=blastxml MODULE_PATH=objects/blastxml MODULE_ASN=blastxml.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blastxml'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m blastxml.asn -M "" -oA -oc blastxml -or objects/blastxml -odi -od blastxml.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd blastxml.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blastxml'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blastxml'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blastxml'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml'
/usr/bin/make[4] (Makefile.blastxml.lib): Nothing to be done for `export-headers'.
File blastxml2.module not found. Using defaults...
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=blastxml2 MODULE_PATH=objects/blastxml2 MODULE_ASN=blastxml2.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blastxml2'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m blastxml2.asn -M "" -oA -oc blastxml2 -or objects/blastxml2 -odi -od blastxml2.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd blastxml2.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blastxml2'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blastxml2'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blastxml2'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=id2 MODULE_PATH=objects/id2 MODULE_ASN=id2.asn MODULE_IMPORT='objects/seqsplit/seqsplit objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqsplit/seqsplit.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/seqsplit/seqsplit.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/id2'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m id2.asn -M "objects/seqsplit/seqsplit.asn objects/seqloc/seqloc.asn" -oA -oc id2 -or objects/id2 -odi -od id2.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd id2.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/id2'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2'
cd objects/entrez2/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2'
/usr/bin/make[4] (Makefile.blastxml2.lib): Nothing to be done for `export-headers'.
cd /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/entrez2 && /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh entrez2 all
Platform not defined for Linux armv8l -- please fix me
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=entrez2 MODULE_PATH=objects/entrez2 MODULE_ASN=entrez2.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/entrez2'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m entrez2.asn -M "" -oA -oc entrez2 -or objects/entrez2 -odi -od entrez2.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd entrez2.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/entrez2'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/entrez2'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/entrez2'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
/usr/bin/make[4] (Makefile.entrez2.lib): Nothing to be done for `export-headers'.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
/usr/bin/make[4] (Makefile.entrez2cli.lib): Nothing to be done for `export-headers'.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=taxon1 MODULE_PATH=objects/taxon1 MODULE_ASN=taxon1.asn MODULE_IMPORT='objects/seqfeat/seqfeat' IMPDEPS='/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqfeat/seqfeat.asn' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/taxon1'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m taxon1.asn -M "objects/seqfeat/seqfeat.asn" -oA -oc taxon1 -or objects/taxon1 -odi -od taxon1.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd taxon1.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/taxon1'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1'
cd objects/gbseq/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
cd /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/gbseq && /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh gbseq all
Platform not defined for Linux armv8l -- please fix me
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=gbseq MODULE_PATH=objects/gbseq MODULE_ASN=gbseq.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/gbseq'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m gbseq.asn -M "" -oA -oc gbseq -or objects/gbseq -odi -od gbseq.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd gbseq.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/gbseq'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/gbseq'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/gbseq'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq'
/usr/bin/make[4] (Makefile.gbseq.lib): Nothing to be done for `export-headers'.
File blastxml.module not found. Using defaults...
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=blastxml MODULE_PATH=objects/blastxml MODULE_ASN=blastxml.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blastxml'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m blastxml.asn -M "" -oA -oc blastxml -or objects/blastxml -odi -od blastxml.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd blastxml.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blastxml'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml'
cd objects/medlars/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
cd /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/medlars && /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh medlars all
File blastxml2.module not found. Using defaults...
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=blastxml2 MODULE_PATH=objects/blastxml2 MODULE_ASN=blastxml2.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blastxml2'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m blastxml2.asn -M "" -oA -oc blastxml2 -or objects/blastxml2 -odi -od blastxml2.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd blastxml2.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blastxml2'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2'
cd objects/pubmed/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
Platform not defined for Linux armv8l -- please fix me
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
cd /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/pubmed && /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh pubmed all
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=medlars MODULE_PATH=objects/medlars MODULE_ASN=medlars.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio' IMPDEPS='/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/medlars'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m medlars.asn -M "objects/general/general.asn objects/biblio/biblio.asn" -oA -oc medlars -or objects/medlars -odi -od medlars.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd medlars.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/medlars'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/medlars'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/medlars'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
Platform not defined for Linux armv8l -- please fix me
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.medlars.lib): Nothing to be done for `export-headers'.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=pubmed MODULE_PATH=objects/pubmed MODULE_ASN=pubmed.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline' IMPDEPS='/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/pubmed'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m pubmed.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn" -oA -oc pubmed -or objects/pubmed -odi -od pubmed.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd pubmed.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/pubmed'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/pubmed'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/pubmed'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=entrez2 MODULE_PATH=objects/entrez2 MODULE_ASN=entrez2.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/entrez2'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m entrez2.asn -M "" -oA -oc entrez2 -or objects/entrez2 -odi -od entrez2.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd entrez2.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/entrez2'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed'
cd objects/mla/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make[4] (Makefile.pubmed.lib): Nothing to be done for `export-headers'.
cd /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/mla && /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh mla all
Platform not defined for Linux armv8l -- please fix me
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=mla MODULE_PATH=objects/mla MODULE_ASN=mla.asn MODULE_IMPORT='objects/biblio/biblio objects/medline/medline objects/medlars/medlars objects/pubmed/pubmed objects/pub/pub' IMPDEPS='/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/medlars/medlars.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/pubmed/pubmed.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/pub/pub.asn' IMPFILES='objects/biblio/biblio.asn objects/medline/medline.asn objects/medlars/medlars.asn objects/pubmed/pubmed.asn objects/pub/pub.asn' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/mla'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m mla.asn -M "objects/biblio/biblio.asn objects/medline/medline.asn objects/medlars/medlars.asn objects/pubmed/pubmed.asn objects/pub/pub.asn" -oA -oc mla -or objects/mla -odi -od mla.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd mla.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/mla'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/mla'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/mla'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
/usr/bin/make[4] (Makefile.mla.lib): Nothing to be done for `export-headers'.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
/usr/bin/make[4] (Makefile.mlacli.lib): Nothing to be done for `export-headers'.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=gbseq MODULE_PATH=objects/gbseq MODULE_ASN=gbseq.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/gbseq'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m gbseq.asn -M "" -oA -oc gbseq -or objects/gbseq -odi -od gbseq.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd gbseq.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/gbseq'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq'
cd objects/taxon3/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
cd /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/taxon3 && /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh taxon3 all
Platform not defined for Linux armv8l -- please fix me
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=taxon3 MODULE_PATH=objects/taxon3 MODULE_ASN=taxon3.asn MODULE_IMPORT='objects/seqfeat/seqfeat' IMPDEPS='/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqfeat/seqfeat.asn' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/taxon3'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m taxon3.asn -M "objects/seqfeat/seqfeat.asn" -oA -oc taxon3 -or objects/taxon3 -odi -od taxon3.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd taxon3.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/taxon3'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/taxon3'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/taxon3'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3'
/usr/bin/make[4] (Makefile.taxon3.lib): Nothing to be done for `export-headers'.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=medlars MODULE_PATH=objects/medlars MODULE_ASN=medlars.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio' IMPDEPS='/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/medlars'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m medlars.asn -M "objects/general/general.asn objects/biblio/biblio.asn" -oA -oc medlars -or objects/medlars -odi -od medlars.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd medlars.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/medlars'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars'
cd objects/valid/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
cd /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/valid && /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh valid all
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=pubmed MODULE_PATH=objects/pubmed MODULE_ASN=pubmed.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline' IMPDEPS='/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/pubmed'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m pubmed.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn" -oA -oc pubmed -or objects/pubmed -odi -od pubmed.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd pubmed.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/pubmed'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed'
cd objects/general/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=general UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
Platform not defined for Linux armv8l -- please fix me
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/general TMPL=general -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=valid MODULE_PATH=objects/valid MODULE_ASN=valid.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/valid'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m valid.asn -M "" -oA -oc valid -or objects/valid -odi -od valid.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd valid.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/valid'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/valid'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/valid'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid'
/usr/bin/make[4] (Makefile.valid.lib): Nothing to be done for `export-headers'.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=mla MODULE_PATH=objects/mla MODULE_ASN=mla.asn MODULE_IMPORT='objects/biblio/biblio objects/medline/medline objects/medlars/medlars objects/pubmed/pubmed objects/pub/pub' IMPDEPS='/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/medlars/medlars.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/pubmed/pubmed.asn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/pub/pub.asn' IMPFILES='objects/biblio/biblio.asn objects/medline/medline.asn objects/medlars/medlars.asn objects/pubmed/pubmed.asn objects/pub/pub.asn' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/mla'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m mla.asn -M "objects/biblio/biblio.asn objects/medline/medline.asn objects/medlars/medlars.asn objects/pubmed/pubmed.asn objects/pub/pub.asn" -oA -oc mla -or objects/mla -odi -od mla.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd mla.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/mla'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
cd objects/seqcode/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqcode UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqcode TMPL=seqcode -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=taxon3 MODULE_PATH=objects/taxon3 MODULE_ASN=taxon3.asn MODULE_IMPORT='objects/seqfeat/seqfeat' IMPDEPS='/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqfeat/seqfeat.asn' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/taxon3'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m taxon3.asn -M "objects/seqfeat/seqfeat.asn" -oA -oc taxon3 -or objects/taxon3 -odi -od taxon3.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd taxon3.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/taxon3'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3'
cd objects/blastxml/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blastxml UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blastxml TMPL=blastxml -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/objectinfo.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/general/uoconv.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/general/uoconv.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/general/Date_.cpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/general/general___.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/general/Date_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/general/Date.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/general/Date.cpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/general/general__.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqcode/Seq_code_set_.cpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqcode/seqcode___.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqcode/Seq_code_set_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqcode/Seq_code_set.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqcode/Seq_code_set.cpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqcode/seqcode__.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=valid MODULE_PATH=objects/valid MODULE_ASN=valid.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/valid'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src -m valid.asn -M "" -oA -oc valid -or objects/valid -odi -od valid.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd valid.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/valid'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid'
cd objects/blastxml2/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blastxml2 UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blastxml2 TMPL=blastxml2 -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blastxml/BlastOutput_.cpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blastxml/blastxml___.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/blastxml/BlastOutput_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/blastxml/BlastOutput.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blastxml/BlastOutput.cpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blastxml/blastxml__.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blastxml2/BlastOutput2_.cpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blastxml2/blastxml2___.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/blastxml2/BlastOutput2_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/blastxml2/BlastOutput2.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blastxml2/BlastOutput2.cpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blastxml2/blastxml2__.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/objectinfo.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/general/uoconv.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/general/uoconv.cpp:36:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqcode/seqcode__.cpp -o seqcode__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqcode/seqcode___.cpp -o seqcode___.o
/bin/rm -f libseqcode.so .libseqcode.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libseqcode.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC seqcode__.o seqcode___.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqcode.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libseqcode.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libseqcode.so
/bin/ln -f .seqcode.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.seqcode.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode'
cd objects/entrez2/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=entrez2 UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/entrez2 TMPL=entrez2 -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blastxml/blastxml__.cpp -o blastxml__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blastxml/blastxml___.cpp -o blastxml___.o
/bin/rm -f libblastxml.so .libblastxml.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libblastxml.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blastxml__.o blastxml___.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastxml.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libblastxml.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libblastxml.so
/bin/ln -f .blastxml.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.blastxml.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml'
cd objects/gbseq/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=gbseq UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/gbseq TMPL=gbseq -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/include/c++/8/bits/vector.tcc: In function 'ncbi::CRef<ncbi::objects::CUser_field> ncbi::objects::s_PackAsUserField(ncbi::CConstObjectInfo, const string*)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
^~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/entrez2/E2Reply_.cpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/entrez2/entrez2___.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/entrez2/E2Reply_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/entrez2/E2Reply.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/entrez2/E2Reply.cpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/entrez2/entrez2__.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/gbseq/GBAltSeqData_.cpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/gbseq/gbseq___.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/gbseq/GBAltSeqData_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/gbseq/GBAltSeqData.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/gbseq/GBAltSeqData.cpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/gbseq/gbseq__.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blastxml2/blastxml2__.cpp -o blastxml2__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blastxml2/blastxml2___.cpp -o blastxml2___.o
/bin/rm -f libblastxml2.so .libblastxml2.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libblastxml2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blastxml2__.o blastxml2___.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastxml2.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libblastxml2.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libblastxml2.so
/bin/ln -f .blastxml2.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.blastxml2.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/general/general__.cpp -o general__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/general/general___.cpp -o general___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/general/uoconv.cpp -o uoconv.o
/bin/rm -f libgeneral.so .libgeneral.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libgeneral.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC general__.o general___.o uoconv.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lxser -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgeneral.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libgeneral.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libgeneral.so
/bin/ln -f .general.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.general.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general'
cd objects/biblio/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=biblio UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
cd objects/valid/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=valid UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/biblio TMPL=biblio -w -j4 --jobserver-auth=7,8 all
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/valid TMPL=valid -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/entrez2/entrez2__.cpp -o entrez2__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/entrez2/entrez2___.cpp -o entrez2___.o
/bin/rm -f libentrez2.so .libentrez2.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libentrez2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC entrez2__.o entrez2___.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libentrez2.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libentrez2.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libentrez2.so
/bin/ln -f .entrez2.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.entrez2.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
cd objects/entrez2/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=entrez2cli UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/entrez2 TMPL=entrez2cli -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/biblio/Affil_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/biblio/Affil.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/biblio/Affil.cpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio__.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/valid/Comment_rule_.cpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/valid/valid___.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/static_set.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/valid/Comment_rule.cpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/valid/valid__.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/biblio/citation_base.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/biblio/citation_base.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/biblio/Affil_.cpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio___.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/gbseq/gbseq__.cpp -o gbseq__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/gbseq/gbseq___.cpp -o gbseq___.o
/bin/rm -f libgbseq.so .libgbseq.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libgbseq.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC gbseq__.o gbseq___.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgbseq.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libgbseq.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libgbseq.so
/bin/ln -f .gbseq.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.gbseq.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq'
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/entrez2/entrez2_client_.cpp:39:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/entrez2/entrez2_client_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/entrez2/entrez2_client.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/entrez2/entrez2_client.cpp:42:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/valid/valid__.cpp:3:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/valid/Comment_set.cpp: In static member function 'static std::vector<std::__cxx11::basic_string<char> > ncbi::objects::CComment_set::GetFieldNames(const string&)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/valid/Comment_set.cpp:158:18: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=]
} catch (CException ) {
^~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/entrez2/entrez2_client.cpp -o entrez2_client.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/entrez2/entrez2_client_.cpp -o entrez2_client_.o
/bin/rm -f libentrez2cli.so .libentrez2cli.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libentrez2cli.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC entrez2_client.o entrez2_client_.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lentrez2 -lxconnect -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libentrez2cli.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libentrez2cli.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libentrez2cli.so
/bin/ln -f .entrez2cli.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.entrez2cli.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/valid/valid__.cpp -o valid__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/valid/valid___.cpp -o valid___.o
/bin/rm -f libvalid.so .libvalid.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libvalid.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC valid__.o valid___.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lgeneral -lxser -lxregexp -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libvalid.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libvalid.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libvalid.so
/bin/ln -f .valid.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.valid.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio__.cpp -o biblio__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio___.cpp -o biblio___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/biblio/citation_base.cpp -o citation_base.o
/bin/rm -f libbiblio.so .libbiblio.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libbiblio.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC biblio__.o biblio___.o citation_base.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lgeneral -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libbiblio.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libbiblio.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libbiblio.so
/bin/ln -f .biblio.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.biblio.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio'
cd objects/medline/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=medline UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
cd objects/medlars/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=medlars UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/medline TMPL=medline -w -j4 --jobserver-auth=7,8 all
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/medlars TMPL=medlars -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/medlars/Medlars_entry_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/medlars/Medlars_entry.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/medlars/Medlars_entry.cpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/medlars/medlars__.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/medline/DocRef_.cpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/medline/medline___.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/medline/DocRef_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/medline/DocRef.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/medline/DocRef.cpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/medline/medline__.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/medlars/Medlars_entry_.cpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/medlars/medlars___.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/medlars/medlars__.cpp -o medlars__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/medlars/medlars___.cpp -o medlars___.o
/bin/rm -f libmedlars.so .libmedlars.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libmedlars.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC medlars__.o medlars___.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lbiblio -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmedlars.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libmedlars.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libmedlars.so
/bin/ln -f .medlars.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.medlars.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/medline/medline__.cpp -o medline__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/medline/medline___.cpp -o medline___.o
/bin/rm -f libmedline.so .libmedline.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libmedline.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC medline__.o medline___.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lbiblio -lgeneral -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmedline.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libmedline.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libmedline.so
/bin/ln -f .medline.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.medline.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline'
cd objects/pub/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=pub UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
cd objects/pubmed/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=pubmed UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/pubmed TMPL=pubmed -w -j4 --jobserver-auth=7,8 all
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/pub TMPL=pub -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/pubmed/Pubmed_entry_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/pubmed/Pubmed_entry.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/pubmed/Pubmed_entry.cpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/pubmed/pubmed__.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/pub/Pub_.cpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/pub/pub___.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/pub/Pub_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/pub/Pub.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/pub/Pub.cpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/pub/pub__.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/pubmed/Pubmed_entry_.cpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/pubmed/pubmed___.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/pubmed/pubmed__.cpp -o pubmed__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/pubmed/pubmed___.cpp -o pubmed___.o
/bin/rm -f libpubmed.so .libpubmed.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libpubmed.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC pubmed__.o pubmed___.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lmedline -lbiblio -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libpubmed.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libpubmed.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libpubmed.so
/bin/ln -f .pubmed.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.pubmed.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/pub/pub__.cpp -o pub__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/pub/pub___.cpp -o pub___.o
/bin/rm -f libpub.so .libpub.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libpub.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC pub__.o pub___.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lmedline -lbiblio -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libpub.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libpub.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libpub.so
/bin/ln -f .pub.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.pub.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub'
cd objects/seq/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seq UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
cd objects/mla/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=mla UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/mla TMPL=mla -w -j4 --jobserver-auth=7,8 all
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq TMPL=seq -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_diag_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_diag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/Dense_diag.cpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/seqalign__.cpp:2,
from seqalign__.cpp:1:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/mla/Error_val_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/mla/Error_val.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/mla/Error_val.cpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/mla/mla__.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Align_def_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Align_def.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/Align_def.cpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/seq__.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/mla/Error_val_.cpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/mla/mla___.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqblock/EMBL_block_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqblock/EMBL_block.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqblock/EMBL_block.cpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqblock/seqblock__.cpp:2,
from seqblock__.cpp:1:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/BinomialOrgName_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/BinomialOrgName.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/BinomialOrgName.cpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:2,
from seqfeat__.cpp:1:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/BinomialOrgName_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/BinomialOrgName.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/BinomialOrgName.cpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:2,
from seqfeat__.cpp:1:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Align_def_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Align_def.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/Align_def.cpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/seq__.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/seqalign__.cpp:9,
from seqalign__.cpp:1:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/Seq_align.cpp: In member function 'void ncbi::objects::CSeq_align::RemapToLoc(ncbi::objects::CSeq_align_Base::TDim, const ncbi::objects::CSeq_loc&, bool)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/Seq_align.cpp:1381:69: warning: 'void ncbi::objects::CDense_seg::RemapToLoc(ncbi::objects::CDense_seg_Base::TDim, const ncbi::objects::CSeq_loc&, bool)' is deprecated [-Wdeprecated-declarations]
SetSegs().SetDenseg().RemapToLoc(row, dst_loc, ignore_strand);
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/seqalign__.cpp:3,
from seqalign__.cpp:1:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/Dense_seg.cpp:909:6: note: declared here
void CDense_seg::RemapToLoc(TDim row, const CSeq_loc& loc,
^~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/seqalign__.cpp:9,
from seqalign__.cpp:1:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/Seq_align.cpp:1385:62: warning: 'void ncbi::objects::CStd_seg::RemapToLoc(ncbi::objects::CStd_seg_Base::TDim, const ncbi::objects::CSeq_loc&, bool)' is deprecated [-Wdeprecated-declarations]
(*std_it)->RemapToLoc(row, dst_loc, ignore_strand);
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/Seq_align.cpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/seqalign__.cpp:9,
from seqalign__.cpp:1:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Std_seg.hpp:79:26: note: declared here
NCBI_DEPRECATED void RemapToLoc(TDim row,
^~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/seqalign__.cpp:9,
from seqalign__.cpp:1:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/Seq_align.cpp:1390:68: warning: 'void ncbi::objects::CSeq_align::RemapToLoc(ncbi::objects::CSeq_align_Base::TDim, const ncbi::objects::CSeq_loc&, bool)' is deprecated [-Wdeprecated-declarations]
(*seq_align_it)->RemapToLoc(row, dst_loc, ignore_strand);
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/Seq_align.cpp:1364:6: note: declared here
void CSeq_align::RemapToLoc(TDim row,
^~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Giimport_id_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Giimport_id.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqloc/Giimport_id.cpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqloc/seqloc__.cpp:2,
from seqloc__.cpp:1:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:30,
from seqfeat__.cpp:1:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/PCRPrimerSeq.cpp: In static member function 'static bool ncbi::objects::CPCRPrimerSeq::Fixi(std::__cxx11::string&)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/PCRPrimerSeq.cpp:249:72: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::Find(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, ncbi::NStr::EOccurrence, ncbi::NStr::ECase)' is deprecated [-Wdeprecated-declarations]
pos = NStr::Find(seq, "i", pos, NPOS, NStr::eFirst, NStr::eCase);
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/BinomialOrgName_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/BinomialOrgName.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/BinomialOrgName.cpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:2,
from seqfeat__.cpp:1:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:5473:11: note: declared here
SIZE_TYPE NStr::Find(const CTempString str, const CTempString pattern,
^~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:30,
from seqfeat__.cpp:1:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/PCRPrimerSeq.cpp:249:72: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::Find(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, ncbi::NStr::EOccurrence, ncbi::NStr::ECase)' is deprecated [-Wdeprecated-declarations]
pos = NStr::Find(seq, "i", pos, NPOS, NStr::eFirst, NStr::eCase);
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/BinomialOrgName_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/BinomialOrgName.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/BinomialOrgName.cpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:2,
from seqfeat__.cpp:1:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:5473:11: note: declared here
SIZE_TYPE NStr::Find(const CTempString str, const CTempString pattern,
^~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:42,
from seqfeat__.cpp:1:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/RNA_ref.cpp: In function 'ncbi::CTempString ncbi::objects::s_AaName(int)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/RNA_ref.cpp:124:24: warning: comparison of integer expressions of different signedness: 'int' and 'std::size_t' {aka 'unsigned int'} [-Wsign-compare]
if (idx > 0 && idx < ArraySize(sc_TrnaList)) {
~~~~^~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/mla/mla__.cpp -o mla__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/mla/mla___.cpp -o mla___.o
/bin/rm -f libmla.so .libmla.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libmla.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC mla__.o mla___.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lmedlars -lpub -lpubmed -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmla.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libmla.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libmla.so
/bin/ln -f .mla.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.mla.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
cd objects/mla/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=mlacli UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/mla TMPL=mlacli -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/BinomialOrgName_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/BinomialOrgName.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/BinomialOrgName.cpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:2,
from seqfeat__.cpp:1:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/SubSource.cpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/SubSource.cpp:246:69: note: in expansion of macro 'THROWS'
CRef<CDate> CSubSource::DateFromCollectionDate (const string& test) THROWS((CException))
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:48,
from seqfeat__.cpp:1:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/SubSource.cpp: In static member function 'static void ncbi::objects::CSubSource::IsCorrectDateFormat(const string&, bool&, bool&)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/SubSource.cpp:446:14: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=]
} catch (CException ) {
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/SubSource.cpp: In static member function 'static size_t ncbi::objects::CSubSource::CheckDateFormat(const string&)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/SubSource.cpp:468:22: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=]
} catch (CException) {
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/SubSource.cpp:498:14: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=]
} catch (CException) {
^~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/mla/mla_client_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/mla/mla_client.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/mla/mla_client.cpp:41:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/mla/mla_client_.cpp:39:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/mla/mla_client.cpp -o mla_client.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/mla/mla_client_.cpp -o mla_client_.o
/bin/rm -f libmlacli.so .libmlacli.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libmlacli.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC mla_client.o mla_client_.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lmla -lxconnect -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmlacli.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libmlacli.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libmlacli.so
/bin/ln -f .mlacli.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.mlacli.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/seq__.cpp -o seq__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include seqalign__.cpp -o seqalign__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include seqblock__.cpp -o seqblock__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include seqfeat__.cpp -o seqfeat__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include seqloc__.cpp -o seqloc__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqres/Byte_graph_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqres/Byte_graph.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqres/Byte_graph.cpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqres/seqres__.cpp:2,
from seqres__.cpp:1:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqtable/BVector_data_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqtable/BVector_data.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqtable/BVector_data.cpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqtable/seqtable__.cpp:2,
from seqtable__.cpp:1:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqtable/BVector_data_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqtable/BVector_data.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqtable/BVector_data.cpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqtable/seqtable__.cpp:2,
from seqtable__.cpp:1:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long int&}; _Tp = long long int; _Alloc = std::allocator<long long int>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<long long int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
^~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/Align_def_.cpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/seq___.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/Align_def_.cpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/seq___.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqtable/BVector_data_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqtable/BVector_data.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqtable/BVector_data.cpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqtable/seqtable__.cpp:2,
from seqtable__.cpp:1:
/usr/include/c++/8/bits/stl_vector.h: In member function 'void ncbi::objects::CSeqTable_multi_data::ChangeToInt8()':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In member function 'void ncbi::objects::CSeqTable_multi_data::ChangeToInt_scaled(int, int)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/Dense_diag_.cpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/seqalign___.cpp:2,
from seqalign___.cpp:1:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqblock/EMBL_block_.cpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqblock/seqblock___.cpp:2,
from seqblock___.cpp:1:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include seqres__.cpp -o seqres__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include seqtable__.cpp -o seqtable__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/seq___.cpp -o seq___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include seqalign___.cpp -o seqalign___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include seqblock___.cpp -o seqblock___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include seqfeat___.cpp -o seqfeat___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbiIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/BinomialOrgName_.cpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/seqfeat___.cpp:2,
from seqfeat___.cpp:1:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/BinomialOrgName_.cpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/seqfeat___.cpp:2,
from seqfeat___.cpp:1:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqloc/Giimport_id_.cpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqloc/seqloc___.cpp:2,
from seqloc___.cpp:1:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqres/Byte_graph_.cpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqres/seqres___.cpp:2,
from seqres___.cpp:1:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqtable/BVector_data_.cpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqtable/seqtable___.cpp:2,
from seqtable___.cpp:1:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Seq_data_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Seq_data.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/seqport_util.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/seqport_util.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_id_tree.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_id_handle.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_id_tree.cpp: In member function 'virtual void ncbi::objects::CSeq_id_Giim_Tree::FindMatchStr(const string&, ncbi::objects::CSeq_id_Which_Tree::TSeq_id_MatchList&) const':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_id_tree.cpp:2432:12: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=]
catch (CStringException) {
^~~~~~~~~~~~~~~~
-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include seqloc___.cpp -o seqloc___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include seqres___.cpp -o seqres___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include seqtable___.cpp -o seqtable___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/seqport_util.cpp -o seqport_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_id_tree.cpp -o seq_id_tree.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_id_handle.cpp -o seq_id_handle.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/srIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/seq_id_mapper.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_id_mapper.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/seq_loc_mapper_base.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_loc_mapper_base.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/seq_align_mapper_base.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_align_mapper_base.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/seqlocinfo.hpp:33,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/seqlocinfo.cpp:32:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_align_mapper_base.cpp: In member function 'void ncbi::objects::CSeq_align_Mapper_Base::x_GetDstStd(ncbi::CRef<ncbi::objects::CSeq_align>&) const':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_align_mapper_base.cpp:1505:32: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
if ( row_n == p_row ) {
~~~~~~^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_align_mapper_base.cpp: In member function 'void ncbi::objects::CSeq_align_Mapper_Base::x_GetDstDisc(ncbi::CRef<ncbi::objects::CSeq_align>&) const':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_align_mapper_base.cpp:1651:16: warning: catching polymorphic type 'class ncbi::objects::CAnnotMapperException' by value [-Wcatch-value=]
catch (CAnnotMapperException) {
^~~~~~~~~~~~~~~~~~~~~
c/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_id_mapper.cpp -o seq_id_mapper.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_loc_mapper_base.cpp -o seq_loc_mapper_base.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_align_mapper_base.cpp -o seq_align_mapper_base.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/seqlocinfo.cpp -o seqlocinfo.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/sofa_map.cpp -o sofa_map.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/so_map.cpp In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SeqFeatData_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SeqFeatData.hpp:93,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/sofa_type.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/sofa_map.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SeqFeatData_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SeqFeatData.hpp:93,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/so_map.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/seq_loc_mapper_base.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_loc_mapper_base.cpp:34:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double> >; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:672:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:672:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc:672:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' changed in GCC 7.1
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/seq_loc_mapper_base.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_loc_mapper_base.cpp:34:
/usr/include/c++/8/bits/stl_vector.h: In member function 'ncbi::CRef<ncbi::objects::CSeq_graph> ncbi::objects::CSeq_loc_Mapper_Base::Map(const ncbi::objects::CSeq_graph&)':
/usr/include/c++/8/bits/stl_vector.h:1549:4: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
_M_range_insert(__pos, __first, __last,
^~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1549:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' changed in GCC 7.1
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_loc_from_string.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_loc_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_loc.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/seq_loc_reverse_complementer.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_loc_reverse_complementer.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-o so_map.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_loc_from_string.cpp -o seq_loc_from_string.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_loc_reverse_complementer.cpp -o seq_loc_reverse_complementer.o
/bin/rm -f libseq.so .libseq.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libseq.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC seq__.o seqalign__.o seqblock__.o seqfeat__.o seqloc__.o seqres__.o seqtable__.o seq___.o seqalign___.o seqblock___.o seqfeat___.o seqloc___.o seqres___.o seqtable___.o seqport_util.o seq_id_tree.o seq_id_handle.o seq_id_mapper.o seq_loc_mapper_base.o seq_align_mapper_base.o seqlocinfo.o sofa_map.o so_map.o seq_loc_from_string.o seq_loc_reverse_complementer.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqcode -lpub -lbiblio -lgeneral -lxser -lsequtil -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseq.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libseq.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libseq.so
/bin/ln -f .seq.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.seq.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
cd objects/seqset/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqset UNIX_PROJ="" sources= configurables=configurables.null
cd objects/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blastdb UNIX_PROJ="" sources= configurables=configurables.null
cd objects/genomecoll/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=genome_collection UNIX_PROJ="" sources= configurables=configurables.null
cd objects/variation/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=variation UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqset TMPL=seqset -w -j4 --jobserver-auth=7,8 all
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blastdb TMPL=blastdb -w -j4 --jobserver-auth=7,8 all
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/genomecoll TMPL=genome_collection -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/variation TMPL=variation -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/variation/VariantPlacement_.cpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/variation/variation___.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blastdb/Blast_db_mask_info_.cpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blastdb/blastdb___.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/blastdb/Blast_db_mask_info_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/blastdb/Blast_db_mask_info.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blastdb/Blast_db_mask_info.cpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blastdb/blastdb__.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialdef.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/impl/typeref.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serial.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqset/Bioseq_set.cpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset__.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqset/gb_release_file.hpp:34,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqset/gb_release_file.cpp:32:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/variation/VariantPlacement_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/variation/VariantPlacement.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/variation/VariantPlacement.cpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/variation/variation__.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqset/Bioseq_set_.cpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset___.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/genomecoll/GC_Assemblies_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/genomecoll/GC_Assemblies.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/genomecoll/GC_Assemblies.cpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/genomecoll/genome_collection__.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/genomecoll/GC_Assemblies_.cpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/genomecoll/genome_collection___.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/genomecoll/GC_Assemblies_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/genomecoll/GC_Assemblies.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/genomecoll/GC_Assemblies.cpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/genomecoll/genome_collection__.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/variation/VariantPlacement_.cpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/variation/variation___.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blastdb/blastdb__.cpp -o blastdb__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blastdb/blastdb___.cpp -o blastdb___.o
/bin/rm -f libblastdb.so .libblastdb.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libblastdb.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blastdb__.o blastdb___.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lseq -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastdb.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libblastdb.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libblastdb.so
/bin/ln -f .blastdb.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.blastdb.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb'
cd objects/taxon1/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=taxon1 UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/taxon1 TMPL=taxon1 -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/taxon1/Taxon1_data_.cpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/taxon1/taxon1___.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/taxon1/taxon1.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialdef.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/impl/typeref.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serial.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/taxon1/cache.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/taxon1/Taxon1_data_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/taxon1/Taxon1_data.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/taxon1/Taxon1_data.cpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/taxon1/taxon1__.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/taxon1/taxon1.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialdef.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/impl/typeref.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serial.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/taxon1/cache.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset__.cpp -o seqset__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset___.cpp -o seqset___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqset/gb_release_file.cpp -o gb_release_file.o
/bin/rm -f libseqset.so .libseqset.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libseqset.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC seqset__.o seqset___.o gb_release_file.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lseq -lseqcode -lsequtil -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqset.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libseqset.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libseqset.so
/bin/ln -f .seqset.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.seqset.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset'
cd objects/taxon3/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=taxon3 UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/taxon3 TMPL=taxon3 -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/variation/variation__.cpp -o variation__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/variation/variation___.cpp -o variation___.o
/bin/rm -f libvariation.so .libvariation.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libvariation.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC variation__.o variation___.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lseq -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libvariation.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libvariation.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libvariation.so
/bin/ln -f .variation.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.variation.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation'
cd objects/scoremat/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=scoremat UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/scoremat TMPL=scoremat -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/taxon1/Taxon1_data_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/taxon1/Taxon1_data.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/taxon1/taxon1__.hpp:1,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/taxon1/taxon1.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/taxon1/utils.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/genomecoll/genome_collection__.cpp -o genome_collection__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/genomecoll/genome_collection___.cpp -o genome_collection___.o
/bin/rm -f libgenome_collection.so .libgenome_collection.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libgenome_collection.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC genome_collection__.o genome_collection___.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lseq -lgeneral -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgenome_collection.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libgenome_collection.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libgenome_collection.so
/bin/ln -f .genome_collection.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.genome_collection.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll'
cd objects/seqedit/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqedit UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqedit TMPL=seqedit -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/taxon3/SequenceOfInt_.cpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/taxon3/taxon3___.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/taxon3/taxon3.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/taxon3/SequenceOfInt_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/taxon3/SequenceOfInt.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/taxon3/SequenceOfInt.cpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/taxon3/taxon3__.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/scoremat/BlockProperty_.cpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/scoremat/scoremat___.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/taxon3/taxon3.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/BlockProperty_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/BlockProperty.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/scoremat/BlockProperty.cpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/scoremat/scoremat__.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/taxon3/SequenceOfInt_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/taxon3/SequenceOfInt.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/taxon3/SequenceOfInt.cpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/taxon3/taxon3__.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/taxon1/Taxon1_data_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/taxon1/Taxon1_data.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/taxon1/taxon1__.hpp:1,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/taxon1/taxon1.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/taxon1/utils.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/taxon3/SequenceOfInt_.cpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/taxon3/taxon3___.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqedit/SeqEdit_Cmd_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqedit/SeqEdit_Cmd.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqedit/SeqEdit_Cmd.cpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqedit/seqedit__.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/taxon1/Taxon1_data_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/taxon1/Taxon1_data.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/taxon1/taxon1__.hpp:1,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/taxon1/taxon1.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/taxon1/ctreecont.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/taxon1/ctreecont.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqedit/SeqEdit_Cmd_.cpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqedit/seqedit___.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/taxon1/Taxon1_data_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/taxon1/Taxon1_data.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/taxon1/taxon1__.hpp:1,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/taxon1/taxon1.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/taxon1/ctreecont.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/taxon1/ctreecont.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/taxon1/taxon1__.cpp -o taxon1__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/taxon1/taxon1___.cpp -o taxon1___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/taxon1/taxon1.cpp -o taxon1.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/taxon1/cache.cpp -o cache.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/taxon1/utils.cpp -o utils.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/taxon1/ctreecont.cpp -o ctreecont.o
/bin/rm -f libtaxon1.so .libtaxon1.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libtaxon1.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC taxon1__.o taxon1___.o taxon1.o cache.o utils.o ctreecont.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lxconnect -lseq -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtaxon1.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libtaxon1.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libtaxon1.so
/bin/ln -f .taxon1.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.taxon1.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1'
cd objects/seqsplit/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqsplit UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqsplit TMPL=seqsplit -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/scoremat/scoremat__.cpp -o scoremat__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/scoremat/scoremat___.cpp -o scoremat___.o
/bin/rm -f libscoremat.so .libscoremat.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libscoremat.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC scoremat__.o scoremat___.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqset -lseq -lgeneral -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libscoremat.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libscoremat.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libscoremat.so
/bin/ln -f .scoremat.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.scoremat.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat'
cd objects/submit/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=submit UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/submit TMPL=submit -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/taxon3/taxon3__.cpp -o taxon3__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/taxon3/taxon3___.cpp -o taxon3___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/taxon3/taxon3.cpp -o taxon3.o
/bin/rm -f libtaxon3.so .libtaxon3.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libtaxon3.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC taxon3__.o taxon3___.o taxon3.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lxconnect -lseq -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtaxon3.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libtaxon3.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libtaxon3.so
/bin/ln -f .taxon3.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.taxon3.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3'
cd objects/id1/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=id1 UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/id1 TMPL=id1 -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqsplit/ID2S_Bioseq_Ids_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqsplit/ID2S_Bioseq_Ids.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqsplit/ID2S_Bioseq_Ids.cpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqsplit/seqsplit__.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqsplit/ID2S_Bioseq_Ids_.cpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqsplit/seqsplit___.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/submit/Contact_info_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/submit/Contact_info.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/submit/Contact_info.cpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/submit/submit__.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/submit/Contact_info_.cpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/submit/submit___.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/id1/Entry_complexities_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/id1/Entry_complexities.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/id1/Entry_complexities.cpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/id1/id1__.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/id1/Entry_complexities_.cpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/id1/id1___.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqedit/seqedit__.cpp -o seqedit__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqedit/seqedit___.cpp -o seqedit___.o
/bin/rm -f libseqedit.so .libseqedit.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libseqedit.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC seqedit__.o seqedit___.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqset -lseq -lgeneral -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqedit.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libseqedit.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libseqedit.so
/bin/ln -f .seqedit.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.seqedit.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit'
cd objects/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blast UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blast TMPL=blast -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/submit/submit__.cpp -o submit__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/submit/submit___.cpp -o submit___.o
/bin/rm -f libsubmit.so .libsubmit.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libsubmit.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC submit__.o submit___.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqset -lseq -lbiblio -lgeneral -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsubmit.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libsubmit.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libsubmit.so
/bin/ln -f .submit.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.submit.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit'
cd objtools/readers/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xobjread UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers TMPL=xobjread -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/id1/id1__.cpp -o id1__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/id1/id1___.cpp -o id1___.o
/bin/rm -f libid1.so .libid1.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libid1.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC id1__.o id1___.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqset -lseq -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid1.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libid1.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libid1.so
/bin/ln -f .id1.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.id1.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1'
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/blast/Blas_get_searc_resul_reply_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/blast/Blas_get_searc_resul_reply.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blast/Blas_get_searc_resul_reply.cpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blast/blast__.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/blast/NCBI_Blast4_module.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/blast/names.hpp:45,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blast/names.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blast/Blas_get_searc_resul_reply_.cpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blast/blast___.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/agp_util.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/acc_pattern.cpp:43:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/read_util.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/format_guess_ex.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/agp_read.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_read.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/agp_util.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/acc_pattern.cpp:43:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'std::map<std::__cxx11::basic_string<char>, ncbi::CPatternStats*>::iterator ncbi::CAccPatternCounter::AddName(const string&, ncbi::CAccPatternCounter::TDoubleVec*)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_read.cpp: In function 'ncbi::CRef<ncbi::objects::CBioseq_set> ncbi::AgpRead(ncbi::CNcbiIstream&, ncbi::EAgpRead_IdRule, bool, std::vector<std::vector<char> >*)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_read.cpp:58:74: warning: 'void ncbi::AgpRead(ncbi::CNcbiIstream&, std::vector<ncbi::CRef<ncbi::objects::CSeq_entry> >&, ncbi::EAgpRead_IdRule, bool, std::vector<std::vector<char> >*)' is deprecated [-Wdeprecated-declarations]
AgpRead(is, entries, component_id_rule, set_gap_data, component_types);
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_read.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/agp_read.hpp:61:6: note: declared here
void AgpRead(CNcbiIstream& is,
^~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_read.cpp:58:74: warning: 'void ncbi::AgpRead(ncbi::CNcbiIstream&, std::vector<ncbi::CRef<ncbi::objects::CSeq_entry> >&, ncbi::EAgpRead_IdRule, bool, std::vector<std::vector<char> >*)' is deprecated [-Wdeprecated-declarations]
AgpRead(is, entries, component_id_rule, set_gap_data, component_types);
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_read.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/agp_read.hpp:61:6: note: declared here
void AgpRead(CNcbiIstream& is,
^~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_read.cpp: In function 'void ncbi::AgpRead(ncbi::CNcbiIstream&, std::vector<ncbi::CRef<ncbi::objects::CSeq_entry> >&, ncbi::EAgpRead_IdRule, bool, std::vector<std::vector<char> >*)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_read.cpp:74:74: warning: 'void ncbi::AgpRead(ncbi::CNcbiIstream&, std::vector<ncbi::CRef<ncbi::objects::CBioseq> >&, ncbi::EAgpRead_IdRule, bool, std::vector<std::vector<char> >*)' is deprecated [-Wdeprecated-declarations]
AgpRead(is, bioseqs, component_id_rule, set_gap_data, component_types);
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_read.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/agp_read.hpp:52:6: note: declared here
void AgpRead(CNcbiIstream& is,
^~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_read.cpp:74:74: warning: 'void ncbi::AgpRead(ncbi::CNcbiIstream&, std::vector<ncbi::CRef<ncbi::objects::CBioseq> >&, ncbi::EAgpRead_IdRule, bool, std::vector<std::vector<char> >*)' is deprecated [-Wdeprecated-declarations]
AgpRead(is, bioseqs, component_id_rule, set_gap_data, component_types);
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_read.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/agp_read.hpp:52:6: note: declared here
void AgpRead(CNcbiIstream& is,
^~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/format_guess_ex.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/agp_util.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/agp_seq_entry.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_seq_entry.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/agp_util.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_util.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqsplit/seqsplit__.cpp -o seqsplit__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/seqsplit/seqsplit___.cpp -o seqsplit___.o
/bin/rm -f libseqsplit.so .libseqsplit.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libseqsplit.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC seqsplit__.o seqsplit___.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqset -lseq -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqsplit.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libseqsplit.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libseqsplit.so
/bin/ln -f .seqsplit.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.seqsplit.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit'
cd objmgr/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=objmgr UNIX_PROJ="" sources= configurables=configurables.null
cd objects/id2/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=id2 UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/id2 TMPL=id2 -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr TMPL=objmgr -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/read_util.cpp -o read_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/format_guess_ex.cpp -o format_guess_ex.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/acc_pattern.cpp -o acc_pattern.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_read.cpp -o agp_read.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_seq_entry.cpp -o agp_seq_entry.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_util.cpp -o agp_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/agp_validate_reader.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_validate_reader.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/id2/ID2S_Reply_Get_Chunk_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/id2/ID2S_Reply_Get_Chunk.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/id2/ID2S_Reply_Get_Chunk.cpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/id2/id2__.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/objmgr_exception.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seq_table_setters.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/seq_table_info.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/table_field.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/id2/ID2S_Reply_Get_Chunk_.cpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/id2/id2___.cpp:2:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/seq_annot_info.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seq_annot_info.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/seq_table_info.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seq_table_info.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_validate_reader.cpp: In member function 'virtual void ncbi::CAgpValidateReader::OnObjectChange()':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_validate_reader.cpp:562:28: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=]
catch(CException e){
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/aln_reader.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/aln_reader.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/objmgr_exception.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seq_table_setters.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/seq_table_info.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/table_field.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/seq_table_info.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seq_table_info.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/bed_reader.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/aln_reader.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/aln_reader.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/seq_annot_info.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seq_annot_info.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/aln_reader.cpp: In member function 'bool ncbi::CAlnReader::x_IsGap(ncbi::CAlnReader::TNumrow, ncbi::TSeqPos, const string&)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/aln_reader.cpp:409:13: warning: comparison of integer expressions of different signedness: 'ncbi::CAlnReader::TNumrow' {aka 'int'} and 'std::vector<std::pair<unsigned int, unsigned int> >::size_type' {aka 'unsigned int'} [-Wsign-compare]
if (row > m_MiddleSections.size()) {
~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/bed_reader.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Seq_align_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Seq_align.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/cigar.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/cigar.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/seq_map.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/seq_map_switch.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seq_map_switch.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/snp_annot_info.cpp:32:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta_aln_builder.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta_aln_builder.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seq_table_setters.cpp -o seq_table_setters.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seq_table_info.cpp -o seq_table_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seq_annot_info.cpp -o seq_annot_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/table_field.cpp -o table_field.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seq_map_switch.cpp -o seq_map_switch.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/snp_annot_info.cpp -o snp_annot_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/id2/id2__.cpp -o id2__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/id2/id2___.cpp -o id2___.o
/bin/rm -f libid2.so .libid2.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libid2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC id2__.o id2___.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqsplit -lseq -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid2.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libid2.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libid2.so
/bin/ln -f .id2.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.id2.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blast/blast__.cpp -o blast__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blast/blast___.cpp -o blast___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blast/names.cpp -o names.o
/bin/rm -f libxnetblast.so .libxnetblast.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxnetblast.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blast__.o blast___.o names.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lscoremat -lseqset -lseq -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxnetblast.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxnetblast.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libxnetblast.so
/bin/ln -f .xnetblast.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.xnetblast.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
cd objects/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xnetblastcli UNIX_PROJ="" sources= configurables=configurables.null
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blast_unit_test_util UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta_reader_utils.cpp:38:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=blast_unit_test_util -w -j4 --jobserver-auth=7,8 all
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blast TMPL=xnetblastcli -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
FFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_validate_reader.cpp -o agp_validate_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/aln_reader.cpp -o aln_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/bed_reader.cpp -o bed_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/cigar.cpp -o cigar.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp -o fasta.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta_aln_builder.cpp -o fasta_aln_builder.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta_reader_utils.cpp -o fasta_reader_utils.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/annot_collector.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/annot_types_ci.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/annot_types_ci.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blast/blastclient_.cpp:39:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/blast/blastclient_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/blast/blastclient.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blast/blastclient.cpp:41:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta_reader_utils.cpp:38:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/test_objmgr.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/test_objmgr.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/range.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/getfeature.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp: In constructor 'ncbi::objects::CFastaReader::CFastaReader(ncbi::ILineReader&, ncbi::objects::CFastaReader::TFlags)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:224:29: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:224:29: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:224:29: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:224:29: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:224:29: warning: 'ncbi::objects::CFastaReader::m_ExpectedEnd' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:377:29: note: declared here
NCBI_DEPRECATED TSeqPos m_ExpectedEnd;
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:224:29: warning: 'ncbi::objects::CFastaReader::m_ExpectedEnd' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:377:29: note: declared here
NCBI_DEPRECATED TSeqPos m_ExpectedEnd;
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp: In constructor 'ncbi::objects::CFastaReader::CFastaReader(ncbi::CNcbiIstream&, ncbi::objects::CFastaReader::TFlags)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:234:29: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:234:29: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:234:29: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:234:29: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:234:29: warning: 'ncbi::objects::CFastaReader::m_ExpectedEnd' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:377:29: note: declared here
NCBI_DEPRECATED TSeqPos m_ExpectedEnd;
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:234:29: warning: 'ncbi::objects::CFastaReader::m_ExpectedEnd' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:377:29: note: declared here
NCBI_DEPRECATED TSeqPos m_ExpectedEnd;
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp: In constructor 'ncbi::objects::CFastaReader::CFastaReader(const string&, ncbi::objects::CFastaReader::TFlags)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:244:29: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:244:29: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:244:29: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:244:29: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:244:29: warning: 'ncbi::objects::CFastaReader::m_ExpectedEnd' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:377:29: note: declared here
NCBI_DEPRECATED TSeqPos m_ExpectedEnd;
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:244:29: warning: 'ncbi::objects::CFastaReader::m_ExpectedEnd' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:377:29: note: declared here
NCBI_DEPRECATED TSeqPos m_ExpectedEnd;
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp: In constructor 'ncbi::objects::CFastaReader::CFastaReader(ncbi::objects::CReaderBase::TReaderFlags, ncbi::objects::CFastaReader::TFlags)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:254:29: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:254:29: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:254:29: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:254:29: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:254:29: warning: 'ncbi::objects::CFastaReader::m_ExpectedEnd' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:377:29: note: declared here
NCBI_DEPRECATED TSeqPos m_ExpectedEnd;
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:254:29: warning: 'ncbi::objects::CFastaReader::m_ExpectedEnd' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:377:29: note: declared here
NCBI_DEPRECATED TSeqPos m_ExpectedEnd;
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp: In destructor 'virtual ncbi::objects::CFastaReader::~CFastaReader()':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:260:33: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
CFastaReader::~CFastaReader(void)
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:260:33: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
CFastaReader::~CFastaReader(void)
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp: In member function 'virtual void ncbi::objects::CFastaReader::ParseDefLine(const TStr&, ncbi::objects::ILineErrorListener*)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:621:9: warning: 'ncbi::objects::CFastaReader::m_ExpectedEnd' is deprecated [-Wdeprecated-declarations]
m_ExpectedEnd = range_end - range_start;
^~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:377:29: note: declared here
NCBI_DEPRECATED TSeqPos m_ExpectedEnd;
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:621:9: warning: 'ncbi::objects::CFastaReader::m_ExpectedEnd' is deprecated [-Wdeprecated-declarations]
m_ExpectedEnd = range_end - range_start;
^~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:377:29: note: declared here
NCBI_DEPRECATED TSeqPos m_ExpectedEnd;
^~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/gff_reader.hpp:45,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff_reader.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/seq_loc_cvt.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seq_loc_cvt.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/test_objmgr.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/test_objmgr.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/track_data.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blast/blastclient.cpp -o blastclient.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objects/blast/blastclient_.cpp -o blastclient_.o
/bin/rm -f libxnetblastcli.so .libxnetblastcli.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxnetblastcli.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blastclient.o blastclient_.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lxnetblast -lxconnect -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxnetblastcli.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxnetblastcli.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libxnetblastcli.so
/bin/ln -f .xnetblastcli.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.xnetblastcli.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqalign_util UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=seqalign_util -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/annot_name.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/annot_selector.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/annot_selector.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Seq_descr.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/seq_descr_ci.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seq_descr_ci.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/gff_reader.hpp:45,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff_reader.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/range.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/neutral_seqalign.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqalign_set_convert.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqalign_set_convert.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.cpp:227:5: note: in expansion of macro 'THROWS'
THROWS((CBlastException))
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/range.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/neutral_seqalign.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqalign_cmp.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqalign_cmp.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/reader_data.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/feat_ci.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/feat_ci.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/neutral_seqalign.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqalign_set_convert.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqalign_set_convert.cpp:36:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ncbi::blast::qa::SeqAlign&}; _Tp = ncbi::blast::qa::SeqAlign; _Alloc = std::allocator<ncbi::blast::qa::SeqAlign>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<ncbi::blast::qa::SeqAlign>::iterator' {aka '__gnu_cxx::__normal_iterator<ncbi::blast::qa::SeqAlign*, std::vector<ncbi::blast::qa::SeqAlign> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/neutral_seqalign.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqalign_set_convert.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqalign_set_convert.cpp:36:
/usr/include/c++/8/bits/stl_vector.h: In function 'void ncbi::blast::qa::BlastSeqAlignSetConvert(const ncbi::objects::CSeq_align&, std::vector<ncbi::blast::qa::SeqAlign>&)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::blast::qa::SeqAlign*, std::vector<ncbi::blast::qa::SeqAlign> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqalign_cmp.cpp -o seqalign_cmp.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqalign_set_convert.cpp -o seqalign_set_convert.o
/bin/rm -f libseqalign_util.a .libseqalign_util.a.stamp
ar cr libseqalign_util.a seqalign_cmp.o seqalign_set_convert.o
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqalign_util.a /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libseqalign_util.a /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libseqalign_util.a
/bin/ln -f .seqalign_util.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.seqalign_util.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blast_app_util UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ncbi::objects::SFastaFileMap::SFastaEntry&}; _Tp = ncbi::objects::SFastaFileMap::SFastaEntry; _Alloc = std::allocator<ncbi::objects::SFastaFileMap::SFastaEntry>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<ncbi::objects::SFastaFileMap::SFastaEntry>::iterator' {aka '__gnu_cxx::__normal_iterator<ncbi::objects::SFastaFileMap::SFastaEntry*, std::vector<ncbi::objects::SFastaFileMap::SFastaEntry> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast TMPL=blast_app_util -w -j4 --jobserver-auth=7,8 all
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/microarray_reader.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/test_objmgr.cpp -o test_objmgr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.cpp -o blast_test_util.o
/bin/rm -f libblast_unit_test_util.a .libblast_unit_test_util.a.stamp
ar cr libblast_unit_test_util.a test_objmgr.o blast_test_util.o
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_unit_test_util.a /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libblast_unit_test_util.a /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libblast_unit_test_util.a
/bin/ln -f .blast_unit_test_util.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.blast_unit_test_util.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd objtools/blast/services/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blast_services UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/services TMPL=blast_services -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/annot_collector.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/annot_types_ci.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/graph_ci.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/graph_ci.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/range.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/phrap.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast/blast_app_util.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast/blast_app_util.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/services/blast_services.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/microarray_reader.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/usr/include/c++/8/bits/stl_vector.h: In member function 'virtual void ncbi::objects::CFastaMapper::AssembleSeq(ncbi::objects::ILineErrorListener*)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SFastaFileMap::SFastaEntry*, std::vector<ncbi::objects::SFastaFileMap::SFastaEntry> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/annot_types_ci.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/graph_ci.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/graph_ci.cpp:34:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double> >; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:672:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:672:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc:672:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' changed in GCC 7.1
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/annot_types_ci.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/graph_ci.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/graph_ci.cpp:34:
/usr/include/c++/8/bits/stl_vector.h: In member function 'void ncbi::objects::CMappedGraph::MakeMappedGraphData(ncbi::objects::CSeq_graph&) const':
/usr/include/c++/8/bits/stl_vector.h:1549:4: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
_M_range_insert(__pos, __first, __last,
^~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1549:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' changed in GCC 7.1
-Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/annot_types_ci.cpp -o annot_types_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seq_loc_cvt.cpp -o seq_loc_cvt.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/annot_selector.cpp -o annot_selector.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seq_descr_ci.cpp -o seq_descr_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/feat_ci.cpp -o feat_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/graph_ci.cpp -o graph_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/annot_object.cpp -o annot_object.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compilIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/annot_object.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/annot_object.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/getfeature.cpp -o getfeature.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff_reader.cpp -o gff_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/track_data.cpp -o track_data.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/reader_data.cpp -o reader_data.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/microarray_reader.cpp -o microarray_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/phrap.cpp -o phrap.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/annot_object_index.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/annot_object_index.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/annot_collector.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/annot_types_ci.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/annot_ci.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/annot_ci.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast/blast_app_util.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast/blast_app_util.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/reader_base.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/readfeat.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/services/blast_services.cpp -o blast_services.o
/bin/rm -f libblast_services.so .libblast_services.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libblast_services.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blast_services.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lxnetblastcli -lxnetblast -lxser -lxconnect -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_services.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libblast_services.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libblast_services.so
/bin/ln -f .blast_services.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.blast_services.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services'
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/reader_base.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/tse_info_object.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/seq_entry_info.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/tse_info.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/data_source.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/tse_info.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/reader_base.cpp: In member function 'virtual bool ncbi::objects::CReaderBase::xIsTrackTerminator(const ncbi::CTempString&)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/reader_base.cpp:652:45: warning: 'static ncbi::CTempString ncbi::NStr::TruncateSpaces(ncbi::CTempString, ncbi::NStr::ETrunc)' is deprecated [-Wdeprecated-declarations]
auto line = NStr::TruncateSpaces(strLine);
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/reader_base.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:2214:24: note: declared here
static CTempString TruncateSpaces(const CTempString str,
^~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/reader_base.cpp:652:45: warning: 'static ncbi::CTempString ncbi::NStr::TruncateSpaces(ncbi::CTempString, ncbi::NStr::ETrunc)' is deprecated [-Wdeprecated-declarations]
auto line = NStr::TruncateSpaces(strLine);
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/reader_base.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:2214:24: note: declared here
static CTempString TruncateSpaces(const CTempString str,
^~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/tse_info_object.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/tse_info_object.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/readfeat.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/tse_info_object.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/seq_entry_info.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seq_entry_info.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/bioseq_base_info.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_base_info.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/rm_reader.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/readfeat.cpp: In member function 'bool ncbi::objects::CFeature_table_reader_imp::x_AddQualifierToCdregion(ncbi::CRef<ncbi::objects::CSeq_feat>, ncbi::objects::CSeqFeatData&, ncbi::objects::CFeature_table_reader_imp::EQual, const string&)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/readfeat.cpp:1245:22: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=]
} catch( CStringException ) {
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/readfeat.cpp: In member function 'void ncbi::objects::CFeature_table_reader_imp::x_InitId(const string&, ncbi::objects::CFeature_table_reader::TFlags)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/readfeat.cpp:3310:46: warning: enum constant in boolean context [-Wint-in-bool-context]
(flags && CFeature_table_reader::fAllIdsAsLocal) ? CSeq_id::fParse_AnyLocal:CSeq_id::fParse_Default);
^~~~~~~~~~~~~~
e.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/annot_object_index.cpp -o annot_object_index.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/annot_ci.cpp -o annot_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/tse_info.cpp -o tse_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/tse_info_object.cpp -o tse_info_object.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seq_entry_info.cpp -o seq_entry_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_base_info.cpp -o bioseq_base_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_set_info.cpp -o bioseq_set_info.o In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/rm_reader.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/rm_reader.cpp: In member function 'ncbi::CRef<ncbi::objects::CSeq_feat> ncbi::objects::CRepeatToFeat::operator()(const ncbi::objects::IRepeatRegion&)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/rm_reader.cpp:551:44: warning: enum constant in boolean context [-Wint-in-bool-context]
if (fRemoveRedundancy && m_Library &&
^~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/tse_info_object.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/seq_entry_info.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_set_info.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/wiggle_reader.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff3_sofa.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/bioseq_base_info.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/bioseq_info.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_info.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast/blast_app_util.cpp -o blast_app_util.o
/bin/rm -f libblast_app_util.a .libblast_app_util.a.stamp
ar cr libblast_app_util.a blast_app_util.o
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_app_util.a /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libblast_app_util.a /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libblast_app_util.a
/bin/ln -f .blast_app_util.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.blast_app_util.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/tse_info_object.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/seq_entry_info.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/tse_info.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/data_source.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/data_source.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/wiggle_reader.cpp:35:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ncbi::objects::CRawWiggleRecord&}; _Tp = ncbi::objects::CRawWiggleRecord; _Alloc = std::allocator<ncbi::objects::CRawWiggleRecord>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<ncbi::objects::CRawWiggleRecord>::iterator' {aka '__gnu_cxx::__normal_iterator<ncbi::objects::CRawWiggleRecord*, std::vector<ncbi::objects::CRawWiggleRecord> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ncbi::objects::SValueInfo&}; _Tp = ncbi::objects::SValueInfo; _Alloc = std::allocator<ncbi::objects::SValueInfo>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<ncbi::objects::SValueInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >'} changed in GCC 7.1
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/bioseq_base_info.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/bioseq_info.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_info.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/wiggle_reader.cpp:35:
/usr/include/c++/8/bits/stl_vector.h: In member function 'bool ncbi::objects::CWiggleReader::xReadFixedStepDataRaw(ncbi::ILineReader&, ncbi::objects::CRawWiggleTrack&, ncbi::objects::ILineErrorListener*)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::CRawWiggleRecord*, std::vector<ncbi::objects::CRawWiggleRecord> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In member function 'bool ncbi::objects::CWiggleReader::xReadVariableStepDataRaw(ncbi::ILineReader&, ncbi::objects::CRawWiggleTrack&, ncbi::objects::ILineErrorListener*)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::CRawWiggleRecord*, std::vector<ncbi::objects::CRawWiggleRecord> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/wiggle_reader.cpp:35:
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >; _Compare = __gnu_cxx::__ops::_Val_less_iter]':
/usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
__unguarded_linear_insert(_RandomAccessIterator __last,
^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
__insertion_sort(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
In file included from /usr/include/c++/8/bits/stl_algo.h:61,
from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/wiggle_reader.cpp:35:
/usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >; _Distance = int; _Tp = ncbi::objects::SValueInfo; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
__adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
^~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_heap.h: In function 'void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
__make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last,
^~~~~~~~~~~
/usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_heap.h: In function 'void std::__pop_heap(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
__pop_heap(_RandomAccessIterator __first, _RandomAccessIterator __last,
^~~~~~~~~~
/usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_heap.h:243:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
In file included from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/wiggle_reader.cpp:35:
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
__introsort_loop(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
In file included from /usr/include/c++/8/bits/stl_algo.h:61,
from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/wiggle_reader.cpp:35:
/usr/include/c++/8/bits/stl_heap.h:408:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
std::__pop_heap(__first, __last, __last, __comp);
~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/wiggle_reader.cpp:35:
/usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
std::__introsort_loop(__cut, __last, __depth_limit, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
std::__make_heap(__first, __middle, __comp);
~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h: In member function 'void ncbi::objects::CWiggleReader::xPreprocessValues(ncbi::objects::SWiggleStat&)':
/usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
std::__introsort_loop(__first, __last,
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
std::__lg(__last - __first) * 2,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__comp);
~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
std::__insertion_sort(__first, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/wiggle_reader.cpp:35:
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In member function 'ncbi::CRef<ncbi::objects::CSeq_table> ncbi::objects::CWiggleReader::xMakeTable()':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In member function 'void ncbi::objects::CWiggleReader::xReadFixedStepData(const ncbi::objects::SFixedStepInfo&, ncbi::ILineReader&, ncbi::objects::ILineErrorListener*)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In member function 'void ncbi::objects::CWiggleReader::xReadVariableStepData(const ncbi::objects::SVarStepInfo&, ncbi::ILineReader&, ncbi::objects::ILineErrorListener*)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In member function 'void ncbi::objects::CWiggleReader::xReadBedLine(const string&, ncbi::objects::ILineErrorListener*)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff3_reader.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/priority.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/priority.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/prefetch_impl.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/prefetch_impl.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/reader_base.cpp -o reader_base.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/readfeat.cpp -o readfeat.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/rm_reader.cpp -o rm_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/wiggle_reader.cpp -o wiggle_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff3_sofa.cpp -o gff3_sofa.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff3_reader.cpp -o gff3_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/gtf_reader.cpp -o gtf_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-securitIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/gtf_reader.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff3_reader.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_data.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff3_reader.cpp: In member function 'virtual bool ncbi::objects::CGff3Reader::xUpdateAnnotGeneric(const ncbi::objects::CGff2Record&, ncbi::CRef<ncbi::objects::CSeq_feat>, ncbi::CRef<ncbi::objects::CSeq_annot>, ncbi::objects::ILineErrorListener*)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff3_reader.cpp:603:10: warning: unused variable 'st' [-Wunused-variable]
auto st = pFeature->GetData().GetSubtype();
^~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/gtf_reader.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/gtf_reader.cpp: In member function 'virtual bool ncbi::objects::CGtfReader::x_UpdateAnnotCds(const ncbi::objects::CGff2Record&, ncbi::CRef<ncbi::objects::CSeq_annot>)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/gtf_reader.cpp:363:10: warning: variable 'needXref' set but not used [-Wunused-but-set-variable]
bool needXref = false;
^~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_data.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/objmgr_exception.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/prefetch_manager.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_reader.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_reader.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/prefetch_manager_impl.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/prefetch_manager_impl.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_info.cpp -o bioseq_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/data_source.cpp -o data_source.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/priority.cpp -o priority.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/prefetch_impl.cpp -o prefetch_impl.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/prefetch_manager.cpp -o prefetch_manager.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/prefetch_manager_impl.cpp -o prefetch_manager_impl.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blas/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_reader.cpp: In member function 'virtual ncbi::CRef<ncbi::objects::CSeq_annot> ncbi::objects::CGff2Reader::ReadSeqAnnot(ncbi::ILineReader&, ncbi::objects::ILineErrorListener*)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_reader.cpp:217:30: warning: enum constant in boolean context [-Wint-in-bool-context]
if ((m_iFlags && fGenbankMode) ||
^~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_reader.cpp: In member function 'virtual void ncbi::objects::CGff2Reader::xPostProcessAnnot(ncbi::CRef<ncbi::objects::CSeq_annot>&, ncbi::objects::ILineErrorListener*)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_reader.cpp:323:23: warning: enum constant in boolean context [-Wint-in-bool-context]
if (!(m_iFlags && fGenbankMode)) {
^~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_reader.cpp: In member function 'bool ncbi::objects::CGff2Reader::xGetStartsOnPlusStrand(ncbi::TSeqPos, const std::vector<std::__cxx11::basic_string<char> >&, bool, std::vector<int>&) const':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_reader.cpp:1195:21: warning: comparison of integer expressions of different signedness: 'int' and 'const unsigned int' [-Wsign-compare]
for (auto i=0; i<gapCount; ++i) {
~^~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_reader.cpp: In member function 'bool ncbi::objects::CGff2Reader::xSetDensegStarts(const std::vector<std::__cxx11::basic_string<char> >&, ncbi::objects::ENa_strand, ncbi::objects::ENa_strand, ncbi::TSeqPos, ncbi::TSeqPos, const ncbi::objects::CGff2Record&, ncbi::objects::CSeq_align_Base::C_Segs::TDenseg&)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_reader.cpp:1282:21: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const unsigned int'} [-Wsign-compare]
for (auto i=0; i<gapCount; ++i) {
~^~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_reader.cpp: In member function 'bool ncbi::objects::CGff2Reader::xAlignmentSetSpliced_seg(const ncbi::objects::CGff2Record&, ncbi::CRef<ncbi::objects::CSeq_align>)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_reader.cpp:1369:21: warning: comparison of integer expressions of different signedness: 'int' and 'const unsigned int' [-Wsign-compare]
for (auto i=0; i<gapCount; ++i) {
~^~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/prefetch_manager.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/prefetch_actions.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/prefetch_actions.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/scope.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/scope.cpp:41:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/heap_scope.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/heap_scope.cpp:41:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/gvf_reader.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/vcf_reader.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/gvf_reader.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/scope.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/scope_impl.cpp:41:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/best_feat_finder.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/best_feat_finder.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/scope_info.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/scope_info.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/tse_handle.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/tse_handle.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/seq_map.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seq_map.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
y -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_data.cpp -o gff2_data.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_reader.cpp -o gff2_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/gvf_reader.cpp -o gvf_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/vcf_reader.cpp -o vcf_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/best_feat_finder.cpp -o best_feat_finder.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/source_mod_parser.cpp -o source_mod_parser.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta_exception.cpp -o fasta_exception.oIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_autoinit.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/source_mod_parser.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/source_mod_parser.cpp:38:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta_exception.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_autoinit.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/source_mod_parser.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/source_mod_parser.cpp:38:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_converter.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/ucscregion_reader.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
t+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/prefetch_actions.cpp -o prefetch_actions.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/scope.cpp -o scope.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/heap_scope.cpp -o heap_scope.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/scope_impl.cpp -o scope_impl.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/scope_info.cpp -o scope_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/tse_handle.cpp -o tse_handle.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seq_map.cpp -o seq_map.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=6In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_converter.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/seq_map.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/seq_map_ci.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seq_map_ci.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/ucscregion_reader.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/struct_cmt_reader.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/seq_entry_ci.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seq_entry_ci.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/message_listener.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/message_listener.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/line_error.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/line_error.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/seq_annot_ci.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seq_annot_ci.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/annot_collector.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/annot_types_ci.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/seq_table_ci.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seq_table_ci.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_converter.cpp -o agp_converter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/ucscregion_reader.cpp -o ucscregion_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/struct_cmt_reader.cpp -o struct_cmt_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/message_listener.cpp -o message_listener.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/readers/line_error.cpp -o line_error.o
/bin/rm -f libxobjread.so .libxobjread.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxobjread.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC read_util.o format_guess_ex.o acc_pattern.o agp_read.o agp_seq_entry.o agp_util.o agp_validate_reader.o aln_reader.o bed_reader.o cigar.o fasta.o fasta_aln_builder.o fasta_reader_utils.o getfeature.o gff_reader.o track_data.o reader_data.o microarray_reader.o phrap.o reader_base.o readfeat.o rm_reader.o wiggle_reader.o gff3_sofa.o gff3_reader.o gtf_reader.o gff2_data.o gff2_reader.o gvf_reader.o vcf_reader.o best_feat_finder.o source_mod_parser.o fasta_exception.o agp_converter.o ucscregion_reader.o struct_cmt_reader.o message_listener.o line_error.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blastIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/seq_entry_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seq_entry_handle.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/bioseq_set_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_set_handle.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+-2.7.1/c++/BUILD/lib -lsubmit -lseqset -lseq -lseqcode -lsequtil -lgeneral -lcreaders -lxutil -lpub -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjread.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxobjread.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libxobjread.so
/bin/ln -f .xobjread.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.xobjread.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers'
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/bioseq_handle.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_handle.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
4 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seq_map_ci.cpp -o seq_map_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seq_entry_ci.cpp -o seq_entry_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seq_annot_ci.cpp -o seq_annot_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seq_table_ci.cpp -o seq_table_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seq_entry_handle.cpp -o seq_entry_handle.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_set_handle.cpp -o bioseq_set_handle.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_handle.cpp -o bioseq_handle.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbiIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/seq_annot_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seq_annot_handle.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/data_loader.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/data_loader.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/align_ci.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/align_ci.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/handle_range.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/handle_range.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/objmgr_exception.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seq_annot_handle.cpp -o seq_annot_handle.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/align_ci.cpp -o align_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/data_loader.cpp -o data_loader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/handle_range.cpp -o handle_range.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/objmgr_exception.cpp -o objmgr_exception.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/handle_range_map.cpp -o handle_range_map.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/handle_range.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/handle_range_map.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/handle_range_map.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/object_manager.cpp:39:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/bioseq_handle.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/seq_vector.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seq_vector.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/bioseq_handle.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/seq_vector.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seq_vector_ci.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Seq_descr.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/seq_descr_ci.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/seqdesc_ci.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seqdesc_ci.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
src/objmgr/object_manager.cpp -o object_manager.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seq_vector.cpp -o seq_vector.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seq_vector_ci.cpp -o seq_vector_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seqdesc_ci.cpp -o seqdesc_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/tse_split_info.cpp -o tse_split_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/tse_chunk_info.cpp -o tse_chunk_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_ci.cpp -o bioseq_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/builIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/tse_split_info.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/tse_split_info.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/tse_chunk_info.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/tse_chunk_info.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/bioseq_ci.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_ci.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/annot_type_index.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/seq_loc_mapper.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seq_loc_mapper.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/seq_align_mapper.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seq_align_mapper.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/annot_collector.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/annot_collector.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/data_loader_factory.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/data_loader_factory.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/annot_collector.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/annot_collector.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/mapped_feat.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/mapped_feat.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/seq_feat_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seq_feat_handle.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
d/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/annot_type_index.cpp -o annot_type_index.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seq_loc_mapper.cpp -o seq_loc_mapper.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seq_align_mapper.cpp -o seq_align_mapper.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/annot_collector.cpp -o annot_collector.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/data_loader_factory.cpp -o data_loader_factory.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/mapped_feat.cpp -o mapped_feat.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seq_feat_handle.cpp -o seq_feat_handle.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-prIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/seq_graph_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seq_graph_handle.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/seq_align_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seq_align_handle.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/tse_info_object.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/seq_entry_info.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/tse_info.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/tse_assigner.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/scope.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/scope_transaction.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/scope_impl.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/scope_transaction_impl.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
otector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seq_graph_handle.cpp -o seq_graph_handle.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seq_align_handle.cpp -o seq_align_handle.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/tse_assigner.cpp -o tse_assigner.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/scope_transaction.cpp -o scope_transaction.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/scope_transaction_impl.cpp -o scope_transaction_impl.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/edit_commands_impl.cpp -o edit_commands_impl.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_edit_comIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/edit_commands_impl.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/edit_commands_impl.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/bioseq_edit_commands.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_edit_commands.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/seq_entry_edit_commands.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seq_entry_edit_commands.cpp:38:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/bioseq_set_edit_commands.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_set_edit_commands.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/edit_saver.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/edit_saver.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/unsupp_editsaver.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/unsupp_editsaver.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mands.cpp -o bioseq_edit_commands.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seq_entry_edit_commands.cpp -o seq_entry_edit_commands.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_set_edit_commands.cpp -o bioseq_set_edit_commands.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/edit_saver.cpp -o edit_saver.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/unsupp_editsaver.cpp -o unsupp_editsaver.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/edits_db_engine.cpp -o edits_db_engine.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/edits_db_saver.cpp -o edits_db_saver.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/edits_db_engine.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/edits_db_engine.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/edits_db_saver.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/edits_db_saver.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/annot_finder.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/annot_finder.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqset/Seq_entry_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqset/Seq_entry.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/gc_assembly_parser.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/gc_assembly_parser.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/split_parser.hpp:33,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/split_parser.cpp:32:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/seq_id_sort.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seq_id_sort.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/impl/seq_id_sort.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seq_id_sort.cpp:35:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {ncbi::objects::CSortableSeq_id::SIdPart}; _Tp = ncbi::objects::CSortableSeq_id::SIdPart; _Alloc = std::allocator<ncbi::objects::CSortableSeq_id::SIdPart>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<ncbi::objects::CSortableSeq_id::SIdPart>::iterator' {aka '__gnu_cxx::__normal_iterator<ncbi::objects::CSortableSeq_id::SIdPart*, std::vector<ncbi::objects::CSortableSeq_id::SIdPart> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<ncbi::objects::CSortableSeq_id::SIdPart>::iterator' {aka '__gnu_cxx::__normal_iterator<ncbi::objects::CSortableSeq_id::SIdPart*, std::vector<ncbi::objects::CSortableSeq_id::SIdPart> >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {ncbi::objects::CSortableSeq_id::SIdPart}; _Tp = ncbi::objects::CSortableSeq_id::SIdPart; _Alloc = std::allocator<ncbi::objects::CSortableSeq_id::SIdPart>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::CSortableSeq_id::SIdPart*, std::vector<ncbi::objects::CSortableSeq_id::SIdPart> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
^~~~~~~~~~~~~~~~~
SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/annot_finder.cpp -o annot_finder.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/gc_assembly_parser.cpp -o gc_assembly_parser.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/split_parser.cpp -o split_parser.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/seq_id_sort.cpp -o seq_id_sort.o
/bin/rm -f libxobjmgr.so .libxobjmgr.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxobjmgr.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC seq_table_setters.o seq_table_info.o seq_annot_info.o table_field.o seq_map_switch.o snp_annot_info.o annot_types_ci.o seq_loc_cvt.o annot_selector.o seq_descr_ci.o feat_ci.o graph_ci.o annot_object.o annot_object_index.o annot_ci.o tse_info.o tse_info_object.o seq_entry_info.o bioseq_base_info.o bioseq_set_info.o bioseq_info.o data_source.o priority.o prefetch_impl.o prefetch_manager.o prefetch_manager_impl.o prefetch_actions.o scope.o heap_scope.o scope_impl.o scope_info.o tse_handle.o seq_map.o seq_map_ci.o seq_entry_ci.o seq_annot_ci.o seq_table_ci.o seq_entry_handle.o bioseq_set_handle.o bioseq_handle.o seq_annot_handle.o align_ci.o data_loader.o handle_range.o objmgr_exception.o handle_range_map.o object_manager.o seq_vector.o seq_vector_ci.o seqdesc_ci.o tse_split_info.o tse_chunk_info.o bioseq_ci.o annot_type_index.o seq_loc_mapper.o seq_align_mapper.o annot_collector.o data_loader_factory.o mapped_feat.o seq_feat_handle.o seq_graph_handle.o seq_align_handle.o tse_assigner.o scope_transaction.o scope_transaction_impl.o edit_commands_impl.o bioseq_edit_commands.o seq_entry_edit_commands.o bioseq_set_edit_commands.o edit_saver.o unsupp_editsaver.o edits_db_engine.o edits_db_saver.o annot_finder.o gc_assembly_parser.o split_parser.o seq_id_sort.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjmgr.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxobjmgr.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libxobjmgr.so
/bin/ln -f .xobjmgr.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.xobjmgr.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr'
cd objtools/blast/seqdb_reader/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqdb UNIX_PROJ="" sources= configurables=configurables.null
cd objmgr/util/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=util UNIX_PROJ="" sources= configurables=configurables.null
cd algo/dustmask/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xalgodustmask UNIX_PROJ="" sources= configurables=configurables.null
cd objtools/data_loaders/genbank/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xreader UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/dustmask TMPL=xalgodustmask -w -j4 --jobserver-auth=7,8 all
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader TMPL=seqdb -w -j4 --jobserver-auth=7,8 all
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util TMPL=util -w -j4 --jobserver-auth=7,8 all
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank TMPL=ncbi_xreader -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbvol.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbfilter.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbfilter.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/dustmask/symdust.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/dustmask/symdust.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbvol.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbbitset.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbbitset.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/genbank/writer.hpp:34,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/writer.cpp:31:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/genbank/writer.hpp:34,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/processors.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/genbank/impl/dispatcher.hpp:34,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/dispatcher.cpp:31:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/genbank/reader.hpp:32,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/reader.cpp:31:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdb.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/unicode.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/indexer.cpp:32:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/weight.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/objistr.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/feature.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp: In member function 'char* ncbi::CSeqDBAtlas::Alloc(size_t, ncbi::CSeqDBLockHold&, bool)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp:346:16: warning: catching polymorphic type 'class std::bad_alloc' by value [-Wcatch-value=]
catch(std::bad_alloc) {
^~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp:160:13: warning: 'void ncbi::s_SeqDB_FileNotFound(const string&)' defined but not used [-Wunused-function]
static void s_SeqDB_FileNotFound(const string & fname)
^~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/unicode.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/indexer.cpp:32:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /usr/include/c++/8/map:60,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:45,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp:35:
/usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&>, std::tuple<>}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, std::pair<bool, long long int> >; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, std::pair<bool, long long int> > >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, std::pair<bool, long long int> > >]':
/usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, std::pair<bool, long long int> >, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, std::pair<bool, long long int> > >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, std::pair<bool, long long int> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const std::__cxx11::basic_string<char>, std::pair<bool, long long int> > >'} changed in GCC 7.1
_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/map:61,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:45,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp:35:
/usr/include/c++/8/bits/stl_map.h: In member function 'bool ncbi::CSeqDBAtlas::GetFileSizeL(const string&, ncbi::CSeqDBAtlas::TIndx&)':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, std::pair<bool, long long int> >, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, std::pair<bool, long long int> > >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, std::pair<bool, long long int> > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const std::__cxx11::basic_string<char>, std::pair<bool, long long int> > >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/objistr.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/feature.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/weight.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/weight.cpp: In function 'void ncbi::objects::GetProteinWeights(const ncbi::objects::CBioseq_Handle&, ncbi::objects::TWeights&)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/weight.cpp:362:18: warning: catching polymorphic type 'class ncbi::objects::CObjmgrUtilException' by value [-Wcatch-value=]
} catch (CObjmgrUtilException) {
^~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdb.cpp -o seqdb.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbbitset.cpp -o seqdbbitset.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbfilter.cpp -o seqdbfilter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp -o seqdbatlas.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbalias.cpp -o seqdbalias.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp -o seqdbcommon.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/bu/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/feature.cpp: In function 'ncbi::objects::feature::ELocationInFrame ncbi::objects::feature::IsLocationInFrame(const ncbi::objects::CSeq_feat_Handle&, const ncbi::objects::CSeq_loc&)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/feature.cpp:3391:89: warning: 'ncbi::objects::sequence::ECompare ncbi::objects::sequence::Compare(const ncbi::objects::CSeq_loc&, const ncbi::objects::CSeq_loc&, ncbi::objects::CScope*)' is deprecated [-Wdeprecated-declarations]
sequence::ECompare cmp = sequence::Compare(cds.GetLocation(), loc, &(cds.GetScope()));
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/util/feature.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/feature.cpp:84:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/util/seq_loc_util.hpp:200:20: note: declared here
sequence::ECompare Compare(const CSeq_loc& loc1,
^~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/feature.cpp:3391:89: warning: 'ncbi::objects::sequence::ECompare ncbi::objects::sequence::Compare(const ncbi::objects::CSeq_loc&, const ncbi::objects::CSeq_loc&, ncbi::objects::CScope*)' is deprecated [-Wdeprecated-declarations]
sequence::ECompare cmp = sequence::Compare(cds.GetLocation(), loc, &(cds.GetScope()));
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/util/feature.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/feature.cpp:84:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/util/seq_loc_util.hpp:200:20: note: declared here
sequence::ECompare Compare(const CSeq_loc& loc1,
^~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp: In function 'ncbi::CRef<ncbi::objects::CSeq_loc> ncbi::objects::sequence::SourceToProduct(const ncbi::objects::CSeq_feat&, const ncbi::objects::CSeq_loc&, ncbi::objects::sequence::TS2PFlags, ncbi::objects::CScope*, int*)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp:703:18: warning: catching polymorphic type 'class ncbi::objects::CObjmgrUtilException' by value [-Wcatch-value=]
} catch (CObjmgrUtilException) {
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp: In function 'ncbi::CRef<ncbi::objects::CSeq_loc> ncbi::objects::sequence::ProductToSource(const ncbi::objects::CSeq_feat&, const ncbi::objects::CSeq_loc&, ncbi::objects::sequence::TP2SFlags, ncbi::objects::CScope*)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp:746:18: warning: catching polymorphic type 'class ncbi::objects::CObjmgrUtilException' by value [-Wcatch-value=]
} catch (CObjmgrUtilException) {
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp:751:18: warning: catching polymorphic type 'class ncbi::objects::CObjmgrUtilException' by value [-Wcatch-value=]
} catch (CObjmgrUtilException) {
^~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbalias.cpp:45:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/indexer.cpp: In member function 'void ncbi::objects::CBioseqIndex::x_InitFeats()':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/indexer.cpp:1030:20: warning: variable 'sgx' set but not used [-Wunused-but-set-variable]
CGapIndex* sgx = NULL;
^~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/indexer.cpp:42:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/util/indexer.hpp: In constructor 'ncbi::objects::CGapIndex::CGapIndex(ncbi::TSeqPos, ncbi::TSeqPos, ncbi::TSeqPos, const string&, const std::vector<std::__cxx11::basic_string<char> >&, bool, bool, ncbi::objects::CBioseqIndex&)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/util/indexer.hpp:576:10: warning: 'ncbi::objects::CGapIndex::m_IsAssemblyGap' will be initialized after [-Wreorder]
bool m_IsAssemblyGap;
^~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/util/indexer.hpp:566:28: warning: 'ncbi::CWeakRef<ncbi::objects::CBioseqIndex> ncbi::objects::CGapIndex::m_Bsx' [-Wreorder]
CWeakRef<CBioseqIndex> m_Bsx;
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/indexer.cpp:1362:1: warning: when initialized here [-Wreorder]
CGapIndex::CGapIndex (TSeqPos start,
^~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/indexer.cpp: In function 'int ncbi::objects::SkipMixedContent(const char*)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/indexer.cpp:1835:23: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
for (int i = 0; i < sizeof (mixedTags); i++) {
~~^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/indexer.cpp: In member function 'void ncbi::objects::CWordPairIndexer::PopulateWordPairIndex(std::__cxx11::string)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/indexer.cpp:1912:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string<char>::size_type' {aka 'unsigned int'} [-Wsign-compare]
for (int i = 0; i < str.length(); i++) {
~~^~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp: In member function 'ncbi::CRef<ncbi::objects::CSeq_loc> ncbi::objects::SRelLoc::Resolve(const ncbi::objects::CSeq_loc&, ncbi::objects::CScope*, ncbi::objects::SRelLoc::TFlags) const':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp:4578:22: warning: catching polymorphic type 'class ncbi::objects::CObjmgrUtilException' by value [-Wcatch-value=]
} catch (CObjmgrUtilException) {
^~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/dustmask/symdust.cpp -o symdust.o
/bin/rm -f libxalgodustmask.so .libxalgodustmask.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxalgodustmask.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC symdust.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lxobjmgr -lseq -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgodustmask.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxalgodustmask.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libxalgodustmask.so
/bin/ln -f .xalgodustmask.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.xalgodustmask.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask'
cd algo/segmask/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xalgosegmask UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/segmask TMPL=xalgosegmask -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/reader_snp.cpp:32:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/map:60,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:45,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/weight.cpp:33:
/usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const ncbi::CConstRef<ncbi::objects::CSeq_loc, ncbi::CObjectCounterLocker>&>, std::tuple<>}; _Key = ncbi::CConstRef<ncbi::objects::CSeq_loc>; _Val = std::pair<const ncbi::CConstRef<ncbi::objects::CSeq_loc>, double>; _KeyOfValue = std::_Select1st<std::pair<const ncbi::CConstRef<ncbi::objects::CSeq_loc>, double> >; _Compare = std::less<ncbi::CConstRef<ncbi::objects::CSeq_loc> >; _Alloc = std::allocator<std::pair<const ncbi::CConstRef<ncbi::objects::CSeq_loc>, double> >]':
/usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree<ncbi::CConstRef<ncbi::objects::CSeq_loc>, std::pair<const ncbi::CConstRef<ncbi::objects::CSeq_loc>, double>, std::_Select1st<std::pair<const ncbi::CConstRef<ncbi::objects::CSeq_loc>, double> >, std::less<ncbi::CConstRef<ncbi::objects::CSeq_loc> >, std::allocator<std::pair<const ncbi::CConstRef<ncbi::objects::CSeq_loc>, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const ncbi::CConstRef<ncbi::objects::CSeq_loc>, double> >'} changed in GCC 7.1
_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbgeneral.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbfile.hpp:45,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbfile.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/map:61,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:45,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/weight.cpp:33:
/usr/include/c++/8/bits/stl_map.h: In function 'void ncbi::objects::GetProteinWeights(const ncbi::objects::CBioseq_Handle&, ncbi::objects::TWeights&)':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<ncbi::CConstRef<ncbi::objects::CSeq_loc>, std::pair<const ncbi::CConstRef<ncbi::objects::CSeq_loc>, double>, std::_Select1st<std::pair<const ncbi::CConstRef<ncbi::objects::CSeq_loc>, double> >, std::less<ncbi::CConstRef<ncbi::objects::CSeq_loc> >, std::allocator<std::pair<const ncbi::CConstRef<ncbi::objects::CSeq_loc>, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const ncbi::CConstRef<ncbi::objects::CSeq_loc>, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/bioseq_handle.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/seq_vector.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/segmask/segmask.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/segmask/segmask.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp: In function 'void ncbi::SeqDB_ReadBinaryGiList(const string&, std::vector<int>&)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:809:26: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
if (((endp - beginp) < 2U)
~~~~~~~~~~~~~~~~^~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp: In function 'void ncbi::SeqDB_ReadMemoryGiList(const char*, const char*, std::vector<ncbi::CSeqDBGiList::SGiOid>&, bool*)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:886:32: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
if (((bendp - bbeginp) < 2U)
~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/seqtitle.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/seqtitle.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/genbank/seqref.hpp:34,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/seqref.cpp:31:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:33:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:33:
/usr/include/c++/8/bits/stl_vector.h: In member function 'void ncbi::CSeqDBGiList::GetTiList(std::vector<long long unsigned int>&) const':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/dispatcher.cpp -o dispatcher.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/reader.cpp -o reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/writer.cpp -o writer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/processors.cpp -o processors.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/reader_snp.cpp -o reader_snp.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/seqref.cpp -o seqref.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-semake[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/segmask/segmask.cpp -o segmask.o
/bin/rm -f libxalgosegmask.so .libxalgosegmask.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxalgosegmask.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC segmask.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast -lxobjmgr -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgosegmask.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxalgosegmask.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libxalgosegmask.so
/bin/ln -f .xalgosegmask.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.xalgosegmask.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask'
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:33:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long int&}; _Tp = long long int; _Alloc = std::allocator<long long int>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<long long int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask'
cd objmgr/split/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=id2_split UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:33:
/usr/include/c++/8/bits/stl_vector.h: In member function 'void ncbi::CSeqDBIdSet::x_BooleanSetOperation(ncbi::CSeqDBIdSet::EOperation, const std::vector<long long int>&, bool, const std::vector<long long int>&, bool, std::vector<long long int>&, bool&)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/split TMPL=id2_split -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:33:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {ncbi::CSeqDBGiList::STiOid}; _Tp = ncbi::CSeqDBGiList::STiOid; _Alloc = std::allocator<ncbi::CSeqDBGiList::STiOid>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<ncbi::CSeqDBGiList::STiOid>::iterator' {aka '__gnu_cxx::__normal_iterator<ncbi::CSeqDBGiList::STiOid*, std::vector<ncbi::CSeqDBGiList::STiOid> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {ncbi::CSeqDBGiList::STiOid}; _Tp = ncbi::CSeqDBGiList::STiOid; _Alloc = std::allocator<ncbi::CSeqDBGiList::STiOid>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CSeqDBGiList::STiOid*, std::vector<ncbi::CSeqDBGiList::STiOid> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
^~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbvol.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbvolset.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbimpl.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbimpl.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp:33:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat, ncbi::CObjectCounterLocker> >&}; _Tp = std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >; _Alloc = std::allocator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > >]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > >::iterator' {aka '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbvol.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:33:
/usr/include/c++/8/bits/stl_vector.h: In member function 'ncbi::CRef<ncbi::CSeqDBNegativeList> ncbi::CSeqDBIdSet::GetNegativeList()':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/genbank/blob_id.hpp:34,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/blob_id.cpp:31:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/split/blob_splitter.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/split/blob_splitter.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/split/blob_splitter_params.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/split/blob_splitter_params.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/split/split_blob.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/split/split_blob.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/split/blob_splitter_impl.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/split/blob_splitter_impl.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/objistr.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/feature.cpp:33:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::pair<long long int, ncbi::objects::CMappedFeat>&}; _Tp = std::pair<long long int, ncbi::objects::CMappedFeat>; _Alloc = std::allocator<std::pair<long long int, ncbi::objects::CMappedFeat> >]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<std::pair<long long int, ncbi::objects::CMappedFeat> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::objects::CMappedFeat>*, std::vector<std::pair<long long int, ncbi::objects::CMappedFeat> > >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/objistr.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/feature.cpp:33:
/usr/include/c++/8/bits/stl_vector.h: In function 'void ncbi::objects::feature::GetOverlappingFeatures(ncbi::objects::CScope&, const ncbi::objects::CSeq_loc&, ncbi::objects::CSeqFeatData_Base::E_Choice, ncbi::objects::CSeqFeatData::ESubtype, ncbi::objects::sequence::EOverlapType, ncbi::objects::feature::TMappedFeatScores&, const ncbi::objects::SAnnotSelector*)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::objects::CMappedFeat>*, std::vector<std::pair<long long int, ncbi::objects::CMappedFeat> > >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::objects::CMappedFeat>*, std::vector<std::pair<long long int, ncbi::objects::CMappedFeat> > >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:33:
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
__insertion_sort(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/genbank/impl/request_result.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/request_result.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp:33:
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<ncbi::objects::sequence::COverlapPairLess>]':
/usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
__unguarded_linear_insert(_RandomAccessIterator __last,
^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<ncbi::objects::sequence::COverlapPairLess>]':
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
__insertion_sort(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
In file included from /usr/include/c++/8/bits/char_traits.h:39,
from /usr/include/c++/8/string:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp:33:
/usr/include/c++/8/bits/stl_algobase.h: In function '_ForwardIterator std::__lower_bound(_ForwardIterator, _ForwardIterator, const _Tp&, _Compare) [with _ForwardIterator = __gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >; _Tp = std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >; _Compare = __gnu_cxx::__ops::_Iter_comp_val<ncbi::objects::sequence::COverlapPairLess>]':
/usr/include/c++/8/bits/stl_algobase.h:946:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
__lower_bound(_ForwardIterator __first, _ForwardIterator __last,
^~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algobase.h:946:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
In file included from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp:33:
/usr/include/c++/8/bits/stl_algo.h: In function '_ForwardIterator std::__upper_bound(_ForwardIterator, _ForwardIterator, const _Tp&, _Compare) [with _ForwardIterator = __gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >; _Tp = std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<ncbi::objects::sequence::COverlapPairLess>]':
/usr/include/c++/8/bits/stl_algo.h:2039:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
__upper_bound(_ForwardIterator __first, _ForwardIterator __last,
^~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2039:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h: In function '_RandomAccessIterator std::_V2::__rotate(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, std::random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >]':
/usr/include/c++/8/bits/stl_algo.h:1328:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
__rotate(_RandomAccessIterator __first,
^~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1328:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1328:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__merge_without_buffer(_BidirectionalIterator, _BidirectionalIterator, _BidirectionalIterator, _Distance, _Distance, _Compare) [with _BidirectionalIterator = __gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >; _Distance = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<ncbi::objects::sequence::COverlapPairLess>]':
/usr/include/c++/8/bits/stl_algo.h:2476:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
__merge_without_buffer(_BidirectionalIterator __first,
^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2476:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:2476:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:2501:26: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
= std::__lower_bound(__middle, __last, *__first_cut,
~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__gnu_cxx::__ops::__iter_comp_val(__comp));
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2510:26: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
= std::__upper_bound(__first, __middle, *__second_cut,
~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__gnu_cxx::__ops::__val_comp_iter(__comp));
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1443:27: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
return std::__rotate(__first, __middle, __last,
~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
std::__iterator_category(__first));
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2518:34: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__merge_without_buffer(__first, __first_cut, __new_middle,
~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__len11, __len22, __comp);
~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2520:34: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__merge_without_buffer(__new_middle, __second_cut, __last,
~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__len1 - __len11, __len2 - __len22, __comp);
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__inplace_stable_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<ncbi::objects::sequence::COverlapPairLess>]':
/usr/include/c++/8/bits/stl_algo.h:2761:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
__inplace_stable_sort(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2761:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:2766:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__insertion_sort(__first, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2770:33: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__inplace_stable_sort(__first, __middle, __comp);
~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2771:33: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__inplace_stable_sort(__middle, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2772:34: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__merge_without_buffer(__first, __middle, __last,
~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
__middle - __first,
~~~~~~~~~~~~~~~~~~~
__last - __middle,
~~~~~~~~~~~~~~~~~~
__comp);
~~~~~~~
/usr/include/c++/8/bits/stl_algo.h: In function '_OutputIterator std::__move_merge(_InputIterator, _InputIterator, _InputIterator, _InputIterator, _OutputIterator, _Compare) [with _InputIterator = __gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >; _OutputIterator = std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<ncbi::objects::sequence::COverlapPairLess>]':
/usr/include/c++/8/bits/stl_algo.h:2639:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
__move_merge(_InputIterator __first1, _InputIterator __last1,
^~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2639:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:2639:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:2639:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ncbi::CSeqDBGiList::STiOid*, std::vector<ncbi::CSeqDBGiList::STiOid> >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<ncbi::CSeqDB_SortTiLessThan>]':
/usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CSeqDBGiList::STiOid*, std::vector<ncbi::CSeqDBGiList::STiOid> >' changed in GCC 7.1
__unguarded_linear_insert(_RandomAccessIterator __last,
^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ncbi::CSeqDBGiList::STiOid*, std::vector<ncbi::CSeqDBGiList::STiOid> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<ncbi::CSeqDB_SortTiLessThan>]':
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CSeqDBGiList::STiOid*, std::vector<ncbi::CSeqDBGiList::STiOid> >' changed in GCC 7.1
__insertion_sort(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CSeqDBGiList::STiOid*, std::vector<ncbi::CSeqDBGiList::STiOid> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h: In function '_OutputIterator std::__move_merge(_InputIterator, _InputIterator, _InputIterator, _InputIterator, _OutputIterator, _Compare) [with _InputIterator = std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*; _OutputIterator = __gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<ncbi::objects::sequence::COverlapPairLess>]':
/usr/include/c++/8/bits/stl_algo.h:2639:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__merge_sort_with_buffer(_RandomAccessIterator, _RandomAccessIterator, _Pointer, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >; _Pointer = std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<ncbi::objects::sequence::COverlapPairLess>]':
/usr/include/c++/8/bits/stl_algo.h:2705:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
__merge_sort_with_buffer(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2705:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:2695:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__insertion_sort(__first, __first + __chunk_size, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2698:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__insertion_sort(__first, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2674:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
__result = std::__move_merge(__first, __first + __step_size,
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__first + __step_size,
~~~~~~~~~~~~~~~~~~~~~~
__first + __two_step,
~~~~~~~~~~~~~~~~~~~~~
__result, __comp);
~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2674:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:2682:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__move_merge(__first, __first + __step_size,
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__first + __step_size, __last, __result, __comp);
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2682:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:2674:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
__result = std::__move_merge(__first, __first + __step_size,
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__first + __step_size,
~~~~~~~~~~~~~~~~~~~~~~
__first + __two_step,
~~~~~~~~~~~~~~~~~~~~~
__result, __comp);
~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2682:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__move_merge(__first, __first + __step_size,
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__first + __step_size, __last, __result, __comp);
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2682:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:2698:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__insertion_sort(__first, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/bits/stl_algo.h:61,
from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:33:
/usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
__adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
^~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:33:
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
__introsort_loop(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__introsort_loop(__cut, __last, __depth_limit, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/split/blob_splitter.cpp -o blob_splitter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/split/blob_splitter_params.cpp -o blob_splitter_params.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/split/split_blob.cpp -o split_blob.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/split/blob_splitter_impl.cpp -o blob_splitter_impl.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/split/blob_splitter_parser.cpp -o blob_splitter_parser.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/split/blob_splitter_maker.cpp -o blob_splitter_maker.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format/usr/include/c++/8/bits/stl_algo.h: In member function 'void ncbi::CSeqDBNegativeList::InsureOrder()':
/usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__introsort_loop(__first, __last,
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
std::__lg(__last - __first) * 2,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__comp);
~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__insertion_sort(__first, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h: In member function 'bool ncbi::CSeqDBNegativeList::FindGi(ncbi::TGi)':
/usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__introsort_loop(__first, __last,
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
std::__lg(__last - __first) * 2,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__comp);
~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__insertion_sort(__first, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h: In member function 'bool ncbi::CSeqDBNegativeList::FindTi(ncbi::TTi)':
/usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__introsort_loop(__first, __last,
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
std::__lg(__last - __first) * 2,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__comp);
~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__insertion_sort(__first, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/split/blob_splitter_impl.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/split/blob_splitter_parser.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/bits/stl_algo.h:61,
from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:33:
/usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >; _Distance = int; _Tp = long long int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
__adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
^~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbvol.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:33:
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
__introsort_loop(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
std::__introsort_loop(__cut, __last, __depth_limit, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h: In static member function 'static void ncbi::CSeqDBIdSet::x_SortAndUnique(std::vector<long long int>&)':
/usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
std::__introsort_loop(__first, __last,
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
std::__lg(__last - __first) * 2,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__comp);
~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
std::__insertion_sort(__first, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__merge_adaptive(_BidirectionalIterator, _BidirectionalIterator, _BidirectionalIterator, _Distance, _Distance, _Pointer, _Distance, _Compare) [with _BidirectionalIterator = __gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >; _Distance = int; _Pointer = std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<ncbi::objects::sequence::COverlapPairLess>]':
/usr/include/c++/8/bits/stl_algo.h:2415:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
__merge_adaptive(_BidirectionalIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2415:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:2415:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:2445:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
= std::__lower_bound(__middle, __last, *__first_cut,
~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__gnu_cxx::__ops::__iter_comp_val(__comp));
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2454:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
= std::__upper_bound(__first, __middle, *__second_cut,
~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__gnu_cxx::__ops::__val_comp_iter(__comp));
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1443:27: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
return std::__rotate(__first, __middle, __last,
~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
std::__iterator_category(__first));
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2463:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__merge_adaptive(__first, __first_cut, __new_middle, __len11,
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__len22, __buffer, __buffer_size, __comp);
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2465:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__merge_adaptive(__new_middle, __second_cut, __last,
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__len1 - __len11,
~~~~~~~~~~~~~~~~~
__len2 - __len22, __buffer,
~~~~~~~~~~~~~~~~~~~~~~~~~~~
__buffer_size, __comp);
~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__stable_sort_adaptive(_RandomAccessIterator, _RandomAccessIterator, _Pointer, _Distance, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >; _Pointer = std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*; _Distance = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<ncbi::objects::sequence::COverlapPairLess>]':
/usr/include/c++/8/bits/stl_algo.h:2732:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
__stable_sort_adaptive(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2732:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:2741:31: note: parameter passing for argument of type 'const __gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__stable_sort_adaptive(__first, __middle, __buffer,
~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__buffer_size, __comp);
~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2743:31: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__stable_sort_adaptive(__middle, __last, __buffer,
~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
__buffer_size, __comp);
~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2748:33: note: parameter passing for argument of type 'const __gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__merge_sort_with_buffer(__first, __middle, __buffer, __comp);
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2749:33: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__merge_sort_with_buffer(__middle, __last, __buffer, __comp);
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:2751:28: note: parameter passing for argument of type 'const __gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__merge_adaptive(__first, __middle, __last,
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
_Distance(__middle - __first),
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
_Distance(__last - __middle),
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__buffer, __buffer_size,
~~~~~~~~~~~~~~~~~~~~~~~~
__comp);
~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp:33:
/usr/include/c++/8/bits/stl_vector.h: In function 'void ncbi::objects::sequence::GetOverlappingFeatures(const ncbi::objects::CSeq_loc&, ncbi::objects::CSeqFeatData_Base::E_Choice, ncbi::objects::CSeqFeatData::ESubtype, ncbi::objects::sequence::EOverlapType, ncbi::objects::sequence::TFeatScores&, ncbi::objects::CScope&, ncbi::objects::sequence::TBestFeatOpts, ncbi::objects::sequence::CGetOverlappingFeaturesPlugin*)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp:33:
/usr/include/c++/8/bits/stl_algo.h:5004:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__inplace_stable_sort(__first, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:5006:29: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__stable_sort_adaptive(__first, __last, __buf.begin(),
~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
_DistanceType(__buf.size()), __comp);
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/bits/stl_algo.h:61,
from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:33:
/usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ncbi::CSeqDBGiList::STiOid*, std::vector<ncbi::CSeqDBGiList::STiOid> >; _Distance = int; _Tp = ncbi::CSeqDBGiList::STiOid; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<ncbi::CSeqDB_SortTiLessThan>]':
/usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CSeqDBGiList::STiOid*, std::vector<ncbi::CSeqDBGiList::STiOid> >' changed in GCC 7.1
__adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
^~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/reader_id1_base.cpp:31:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:33:
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ncbi::CSeqDBGiList::STiOid*, std::vector<ncbi::CSeqDBGiList::STiOid> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<ncbi::CSeqDB_SortTiLessThan>]':
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CSeqDBGiList::STiOid*, std::vector<ncbi::CSeqDBGiList::STiOid> >' changed in GCC 7.1
__introsort_loop(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/split/blob_splitter_impl.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/split/blob_splitter_maker.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CSeqDBGiList::STiOid*, std::vector<ncbi::CSeqDBGiList::STiOid> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CSeqDBGiList::STiOid*, std::vector<ncbi::CSeqDBGiList::STiOid> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CSeqDBGiList::STiOid*, std::vector<ncbi::CSeqDBGiList::STiOid> >' changed in GCC 7.1
std::__introsort_loop(__cut, __last, __depth_limit, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h: In function 'void ncbi::s_InsureOrder(TVector&) [with TCompare = ncbi::CSeqDB_SortTiLessThan; TVector = std::vector<ncbi::CSeqDBGiList::STiOid>]':
/usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CSeqDBGiList::STiOid*, std::vector<ncbi::CSeqDBGiList::STiOid> >' changed in GCC 7.1
std::__introsort_loop(__first, __last,
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
std::__lg(__last - __first) * 2,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__comp);
~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CSeqDBGiList::STiOid*, std::vector<ncbi::CSeqDBGiList::STiOid> >' changed in GCC 7.1
std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CSeqDBGiList::STiOid*, std::vector<ncbi::CSeqDBGiList::STiOid> >' changed in GCC 7.1
std::__insertion_sort(__first, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/strsearch.hpp:45,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/util/create_defline.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/split/id_range.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/split/id_range.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp: In member function 'void ncbi::CSeqDBVol::GetRawSeqAndAmbig(int, const char**, int*, int*, ncbi::CSeqDBLockHold&) const':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp:2623:11: warning: variable 'map_end' set but not used [-Wunused-but-set-variable]
TIndx map_end = 0;
^~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/strsearch.hpp:45,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/util/create_defline.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/split/blob_splitter_impl.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/split/blob_splitter_maker.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/reader_id2_base.cpp:32:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/reader_service.cpp:31:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/weight.cpp -o weight.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp -o sequence.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/feature.cpp -o feature.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/indexer.cpp -o indexer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/seqtitle.cpp -o seqtitle.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp -o create_defline.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp:33:
/usr/include/c++/8/bits/stl_vector.h: In function 'ncbi::CConstRef<ncbi::objects::CSeq_feat> ncbi::objects::sequence::GetBestMrnaForCds(const ncbi::objects::CSeq_feat&, ncbi::objects::CScope&, ncbi::objects::sequence::TBestFeatOpts, ncbi::objects::sequence::CGetOverlappingFeaturesPlugin*)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbvol.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbvolset.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbvolset.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/util/obj_sniff.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/obj_sniff.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp: In function 'bool x_EndsWithStrain(const ncbi::CTempString&, const ncbi::CTempString&)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:1137:80: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::FindNoCase(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, ncbi::NStr::EOccurrence)' is deprecated [-Wdeprecated-declarations]
pos = NStr::FindNoCase (taxname, strain, 0, taxname.size() - 1, NStr::eLast);
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/strsearch.hpp:45,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/util/create_defline.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:2082:22: note: declared here
static SIZE_TYPE FindNoCase(const CTempString str,
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:1137:80: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::FindNoCase(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, ncbi::NStr::EOccurrence)' is deprecated [-Wdeprecated-declarations]
pos = NStr::FindNoCase (taxname, strain, 0, taxname.size() - 1, NStr::eLast);
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/strsearch.hpp:45,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/util/create_defline.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:2082:22: note: declared here
static SIZE_TYPE FindNoCase(const CTempString str,
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp: In function 'std::__cxx11::string s_RemoveBracketedOrgFromEnd(std::__cxx11::string, std::__cxx11::string)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:1716:61: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::Find(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, ncbi::NStr::EOccurrence, ncbi::NStr::ECase)' is deprecated [-Wdeprecated-declarations]
SIZE_TYPE cp = NStr::Find(str, "[", 0, NPOS, NStr::eLast);
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/strsearch.hpp:45,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/util/create_defline.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:5473:11: note: declared here
SIZE_TYPE NStr::Find(const CTempString str, const CTempString pattern,
^~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:1716:61: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::Find(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, ncbi::NStr::EOccurrence, ncbi::NStr::ECase)' is deprecated [-Wdeprecated-declarations]
SIZE_TYPE cp = NStr::Find(str, "[", 0, NPOS, NStr::eLast);
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/strsearch.hpp:45,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/util/create_defline.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:5473:11: note: declared here
SIZE_TYPE NStr::Find(const CTempString str, const CTempString pattern,
^~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp: In member function 'void ncbi::objects::sequence::CDeflineGenerator::x_SetTitleFromProteinIdx(const ncbi::objects::CBioseq_Handle&)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:1782:38: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string<char>::size_type' {aka 'unsigned int'} [-Wsign-compare]
if (offset > 0 && offset < m_MainTitle.length()) {
~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp: In member function 'void ncbi::objects::sequence::CDeflineGenerator::x_SetTitleFromProtein(const ncbi::objects::CBioseq_Handle&)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:1980:38: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string<char>::size_type' {aka 'unsigned int'} [-Wsign-compare]
if (offset > 0 && offset < m_MainTitle.length()) {
~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp: In function 'size_t s_TitleEndsInOrganism(std::__cxx11::string&, ncbi::CTempString)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:2595:68: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::FindNoCase(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, ncbi::NStr::EOccurrence)' is deprecated [-Wdeprecated-declarations]
pos = NStr::FindNoCase(title, taxname, 0, NPOS, NStr::eLast);
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/strsearch.hpp:45,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/util/create_defline.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:2082:22: note: declared here
static SIZE_TYPE FindNoCase(const CTempString str,
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:2595:68: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::FindNoCase(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, ncbi::NStr::EOccurrence)' is deprecated [-Wdeprecated-declarations]
pos = NStr::FindNoCase(title, taxname, 0, NPOS, NStr::eLast);
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/strsearch.hpp:45,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/util/create_defline.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:2082:22: note: declared here
static SIZE_TYPE FindNoCase(const CTempString str,
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:2596:17: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
if (pos == idx + 2) {
~~~~^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp: In member function 'void ncbi::objects::sequence::CDeflineGenerator::x_AdjustProteinTitleSuffix(const ncbi::objects::CBioseq_Handle&)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:2654:83: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::FindNoCase(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, ncbi::NStr::EOccurrence)' is deprecated [-Wdeprecated-declarations]
pos = NStr::FindNoCase(m_MainTitle, "][", 0, NPOS, NStr::eLast);
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/strsearch.hpp:45,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/util/create_defline.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:2082:22: note: declared here
static SIZE_TYPE FindNoCase(const CTempString str,
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:2654:83: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::FindNoCase(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, ncbi::NStr::EOccurrence)' is deprecated [-Wdeprecated-declarations]
pos = NStr::FindNoCase(m_MainTitle, "][", 0, NPOS, NStr::eLast);
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/strsearch.hpp:45,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/util/create_defline.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:2082:22: note: declared here
static SIZE_TYPE FindNoCase(const CTempString str,
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp: In member function 'std::__cxx11::string ncbi::objects::sequence::CDeflineGenerator::GenerateDefline(const ncbi::objects::CBioseq_Handle&, ncbi::objects::sequence::CDeflineGenerator::TUserFlags)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:2981:23: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
for (int i = 0; i < sizeof (s_tpaPrefixList) / sizeof (const char*); i++) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdboidlist.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/util/obj_sniff.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/obj_sniff.cpp:33:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {ncbi::objects::CObjectsSniffer::SObjectDescription}; _Tp = ncbi::objects::CObjectsSniffer::SObjectDescription; _Alloc = std::allocator<ncbi::objects::CObjectsSniffer::SObjectDescription>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<ncbi::objects::CObjectsSniffer::SObjectDescription>::iterator' {aka '__gnu_cxx::__normal_iterator<ncbi::objects::CObjectsSniffer::SObjectDescription*, std::vector<ncbi::objects::CObjectsSniffer::SObjectDescription> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {ncbi::objects::CObjectsSniffer::SObjectDescription}; _Tp = ncbi::objects::CObjectsSniffer::SObjectDescription; _Alloc = std::allocator<ncbi::objects::CObjectsSniffer::SObjectDescription>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::CObjectsSniffer::SObjectDescription*, std::vector<ncbi::objects::CObjectsSniffer::SObjectDescription> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
^~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/genbank/impl/incr_time.hpp:33,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/incr_time.cpp:31:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
curity -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/blob_id.cpp -o blob_id.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/request_result.cpp -o request_result.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/reader_id1_base.cpp -o reader_id1_base.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/reader_id2_base.cpp -o reader_id2_base.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/reader_service.cpp -o reader_service.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/incr_time.cpp -o incr_time.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/split/object_splitinfo.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/split/object_splitinfo.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/split/asn_sizer.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/split/asn_sizer.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/seq_loc_util.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/genbank/impl/info_cache.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/info_cache.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/seq_align_util.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ild/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbfile.cpp -o seqdbfile.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbimpl.cpp -o seqdbimpl.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp -o seqdbvol.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbvolset.cpp -o seqdbvolset.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdboidlist.cpp -o seqdboidlist.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp -o seqdbisam.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSETIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbgeneral.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbfile.hpp:45,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbisam.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/split/annot_piece.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/split/annot_piece.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbtax.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbtax.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/util/sequence.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/seq_trimmer.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp: In member function 'ncbi::CSeqDBIsam::EErrorCode ncbi::CSeqDBIsam::x_StringSearch(const string&, std::vector<std::__cxx11::basic_string<char> >&, std::vector<std::__cxx11::basic_string<char> >&, std::vector<long long int>&)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp:1001:9: warning: variable 'found_short' set but not used [-Wunused-but-set-variable]
int found_short(-1);
^~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/seq_loc_util.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/seq_align_util.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/split/chunk_info.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/split/chunk_info.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbgilistset.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbgilistset.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/seq_loc_util.cpp: In function 'bool ncbi::objects::sequence::BadSeqLocSortOrder(const ncbi::objects::CBioseq_Handle&, const ncbi::objects::CSeq_loc&)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/seq_loc_util.cpp:605:14: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=]
} catch (CException) {
^~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbgeneral.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbfile.hpp:45,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbisam.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp:34:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long int}; _Tp = long long int; _Alloc = std::allocator<long long int>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<long long int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long int}; _Tp = long long int; _Alloc = std::allocator<long long int>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
^~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbexpert.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbexpert.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/util/sequence.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/seq_trimmer.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/split/size.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/split/size.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbblob.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbblob.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbgeneral.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbfile.hpp:45,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbisam.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp:34:
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
__insertion_sort(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
In file included from /usr/include/c++/8/bits/stl_algo.h:61,
from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbgeneral.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbfile.hpp:45,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbisam.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp:34:
/usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
__adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
^~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbgeneral.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbfile.hpp:45,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbisam.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp:34:
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
__introsort_loop(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__introsort_loop(__cut, __last, __depth_limit, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h: In member function 'void ncbi::CSeqDBIsam::IdsToOids(int, int, ncbi::CSeqDBNegativeList&)':
/usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__introsort_loop(__first, __last,
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
std::__lg(__last - __first) * 2,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__comp);
~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__insertion_sort(__first, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/util/sequence.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/bioseqgaps_ci.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbtax.cpp -o seqdbtax.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbgilistset.cpp -o seqdbgilistset.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbexpert.cpp -o seqdbexpert.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbblob.cpp -o seqdbblob.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcol.cpp -o seqdbcol.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbgimask.cpp -o seqdbgimask.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/inclIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/column_reader.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcol.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/objutil.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbobj.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbgimask.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbgimask.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/util/sequence.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/bioseqgaps_ci.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/split/id_range.cpp -o id_range.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/split/object_splitinfo.cpp -o object_splitinfo.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/split/asn_sizer.cpp -o asn_sizer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/split/annot_piece.cpp -o annot_piece.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/split/chunk_info.cpp -o chunk_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/split/size.cpp -o size.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/split/split_exceptions.cpp -o split_exceptions.o
/bin/rm -f libid2_split.so .libid2_split.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libid2_split.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blob_splitter.o blob_splitter_params.o split_blob.o blob_splitter_impl.o blob_splitter_parser.o blob_splitter_maker.o id_range.o object_splitinfo.o asn_sizer.o annot_piece.o chunk_info.o size.o split_exceptions.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lxobjmgr -lseqsplit -lseqset -lseq -lgeneral -lxser -lxcompress -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid2_split.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libid2_split.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libid2_split.so
/bin/ln -f .id2_split.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.id2_split.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split'
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/objutil.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
-D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/obj_sniff.cpp -o obj_sniff.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/seq_loc_util.cpp -o seq_loc_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/seq_align_util.cpp -o seq_align_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/seq_trimmer.cpp -o seq_trimmer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/bioseqgaps_ci.cpp -o bioseqgaps_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/objutil.cpp -o objutil.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/feature_edit.cpp -o feature_edit.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/feature_edit.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/objutil.cpp: In instantiation of 'bool ncbi::objects::{anonymous}::s_IsTagStart(const _T&, const _T&) [with _T = const char*]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/objutil.cpp:1805:81: required from here
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/objutil.cpp:1733:57: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
for (int possible_str_idx = 0; possible_str_idx < num_possible_tag_starts; ++possible_str_idx) {
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/util/autodef.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/util/autodef.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
ude /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbobj.cpp -o seqdbobj.o
/bin/rm -f libseqdb.so .libseqdb.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libseqdb.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC seqdb.o seqdbbitset.o seqdbfilter.o seqdbatlas.o seqdbalias.o seqdbcommon.o seqdbfile.o seqdbimpl.o seqdbvol.o seqdbvolset.o seqdboidlist.o seqdbisam.o seqdbtax.o seqdbgilistset.o seqdbexpert.o seqdbblob.o seqdbcol.o seqdbgimask.o seqdbobj.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lblastdb -lxobjmgr -lseq -lgeneral -lxser -lsequtil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqdb.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libseqdb.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libseqdb.so
/bin/ln -f .seqdb.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.seqdb.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader'
cd objtools/data_loaders/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xloader_blastdb UNIX_PROJ="" sources= configurables=configurables.null
cd objtools/blast/seqdb_writer/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=writedb UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer TMPL=writedb -w -j4 --jobserver-auth=7,8 all
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb TMPL=ncbi_xloader_blastdb -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/util/autodef.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_feature_clause_base.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
blast+-2.7.1/c++/src/objtools/data_loaders/genbank/info_cache.cpp -o info_cache.o
/bin/rm -f libncbi_xreader.a .libncbi_xreader.a.stamp
/bin/rm -f libncbi_xreader.so .libncbi_xreader.so.stamp
ar cr libncbi_xreader.a dispatcher.o reader.o writer.o processors.o reader_snp.o seqref.o blob_id.o request_result.o reader_id1_base.o reader_id2_base.o reader_service.o incr_time.o info_cache.o
/usr/bin/g++ -std=gnu++11 -shared -o libncbi_xreader.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC dispatcher.o reader.o writer.o processors.o reader_snp.o seqref.o blob_id.o request_result.o reader_id1_base.o reader_id2_base.o reader_service.o incr_time.o info_cache.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxconnect -lxcompress -lxser -lsequtil -lxutil -lxncbi -lz -lbz2 -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader.a /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libncbi_xreader.a /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libncbi_xreader.a
/bin/ln -f .ncbi_xreader-static.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.ncbi_xreader-static.dep
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libncbi_xreader.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libncbi_xreader.so
/bin/ln -f .ncbi_xreader.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.ncbi_xreader.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
cd objtools/blast/services/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blast_services_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services/unit_test'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services/unit_test'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services/unit_test'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services/unit_test'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services/unit_test'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/services/unit_test TMPL=blast_services_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/util/autodef.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_feature_clause_base.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/blastdb/bdbloader.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb/bdbloader.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/blastdb/blastdb_adapter.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb/local_blastdb_adapter.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb/local_blastdb_adapter.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb_error.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_volume.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_volume.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb_error.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/blastdb/bdbloader.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb/cached_sequence.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb/cached_sequence.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Align_def_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Align_def.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/seq__.hpp:1,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb_general.hpp:45,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb_files.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_files.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb_error.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_impl.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/util/autodef_source_desc.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_source_desc.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/util/autodef_source_desc.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_source_desc.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/services/blast_services.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/services/unit_test/blast_services_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb_error.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_impl.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_files.cpp: In constructor 'ncbi::CWriteDB_File::CWriteDB_File(const string&, const string&, int, Uint8, bool)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_files.cpp:113:22: warning: unused variable 'MAX_OFFSET_BITS' [-Wunused-variable]
static const int MAX_OFFSET_BITS = (sizeof m_Offset * 8) - 1;
^~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_files.cpp: In member function 'int ncbi::CWriteDB_File::Write(const ncbi::CTempString&)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_files.cpp:149:22: warning: unused variable 'MAX_OFFSET_BITS' [-Wunused-variable]
static const int MAX_OFFSET_BITS = (sizeof m_Offset * 8) - 1;
^~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/util/autodef.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_available_modifier.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/util/autodef.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_available_modifier.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb_error.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_isam.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb_error.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb.cpp:33:
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
__insertion_sort(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
In file included from /usr/include/c++/8/bits/stl_algo.h:61,
from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb_error.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb.cpp:33:
/usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >; _Distance = int; _Tp = long long int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
__adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
^~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb_error.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb.cpp:33:
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
__introsort_loop(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
std::__introsort_loop(__cut, __last, __depth_limit, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h: In member function 'void ncbi::CBinaryListBuilder::Write(ncbi::CNcbiOstream&)':
/usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
std::__introsort_loop(__first, __last,
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
std::__lg(__last - __first) * 2,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__comp);
~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
std::__insertion_sort(__first, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb_error.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_gimask.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Seq_descr.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/seq_descr_ci.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/seqdesc_ci.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_mod_combo.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb.cpp -o writedb.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_impl.cpp -o writedb_impl.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_volume.cpp -o writedb_volume.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_files.cpp -o writedb_files.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_isam.cpp -o writedb_isam.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_gimask.cpp -o writedb_gimask.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb/bdbloader.cpp -o bdbloader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb/cached_sequence.cpp -o cached_sequence.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb/local_blastdb_adapter.cpp -o local_blastdb_adapter.o
/bin/rm -f libncbi_xloader_blastdb.so .libncbi_xloader_blastdb.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libncbi_xloader_blastdb.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC bdbloader.o cached_sequence.o local_blastdb_adapter.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqdb -lxobjmgr -lseqset -lseq -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_blastdb.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libncbi_xloader_blastdb.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libncbi_xloader_blastdb.so
/bin/ln -f .ncbi_xloader_blastdb.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.ncbi_xloader_blastdb.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
cd objtools/data_loaders/genbank/cache/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xreader_cache UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
ile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef.cpp -o autodef.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_feature_clause_base.cpp -o autodef_feature_clause_base.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_source_desc.cpp -o autodef_source_desc.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_available_modifier.cpp -o autodef_available_modifier.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_mod_combo.cpp -o autodef_mod_combo.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_source_group.cpp -o autodef_source_group.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/incmake[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/cache TMPL=ncbi_xreader_cache -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/sequtil/sequtil_convert.hpp:34,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_convert.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Seq_descr.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/seq_descr_ci.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/seqdesc_ci.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_source_group.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Seq_descr.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/seq_descr_ci.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/seqdesc_ci.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_mod_combo.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/util/autodef.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_feature_clause.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/genbank/writer.hpp:34,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/genbank/cache/writer_cache.hpp:33,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/cache/writer_cache.cpp:31:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/genbank/reader.hpp:32,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/genbank/cache/reader_cache.hpp:33,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/cache/reader_cache.cpp:31:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_isam.cpp:33:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ncbi::CWriteDB_IsamIndex::SIdOid&}; _Tp = ncbi::CWriteDB_IsamIndex::SIdOid; _Alloc = std::allocator<ncbi::CWriteDB_IsamIndex::SIdOid>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<ncbi::CWriteDB_IsamIndex::SIdOid>::iterator' {aka '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_isam.cpp:33:
/usr/include/c++/8/bits/stl_vector.h: In member function 'void ncbi::CWriteDB_IsamIndex::x_AddTraceIds(int, const TIdList&)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In member function 'void ncbi::CWriteDB_IsamIndex::x_AddGis(int, const TIdList&)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In member function 'void ncbi::CWriteDB_IsamIndex::AddPig(int, int)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/util/autodef.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_feature_clause.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/util/autodef_options.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_options.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbictype.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistre.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_stack.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_isam.cpp:33:
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__move_median_to_first(_Iterator, _Iterator, _Iterator, _Iterator, _Compare) [with _Iterator = __gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/8/bits/stl_algo.h:78:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
__move_median_to_first(_Iterator __result,_Iterator __a, _Iterator __b,
^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:78:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:78:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:78:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >; _Compare = __gnu_cxx::__ops::_Val_less_iter]':
/usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
__unguarded_linear_insert(_RandomAccessIterator __last,
^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
__insertion_sort(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
In file included from /usr/include/c++/8/bits/stl_algo.h:61,
from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbictype.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistre.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_stack.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_isam.cpp:33:
/usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >; _Distance = int; _Tp = ncbi::CWriteDB_IsamIndex::SIdOid; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
__adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
^~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbictype.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistre.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_stack.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_isam.cpp:33:
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
__introsort_loop(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1921:34: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
std::__move_median_to_first(__first, __first + 1, __mid, __last - 1,
~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__comp);
~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1921:34: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
std::__introsort_loop(__cut, __last, __depth_limit, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h: In member function 'void ncbi::CWriteDB_IsamIndex::x_FlushNumericIndex()':
/usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
std::__introsort_loop(__first, __last,
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
std::__lg(__last - __first) * 2,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__comp);
~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
std::__insertion_sort(__first, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Seq_descr.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/seq_descr_ci.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/seqdesc_ci.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_source_group.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/util/autodef_options.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_options.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Align_def_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Align_def.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/seq__.hpp:1,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb_general.hpp:45,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_general.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb_error.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_column.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/blastdb/Blast_filter_program_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/blastdb/Blast_filter_program.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/mask_info_registry.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/mask_info_registry.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_feature_clause.cpp: In member function 'bool ncbi::objects::CAutoDefFeatureClause::x_GetExonDescription(std::__cxx11::string&)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_feature_clause.cpp:725:28: warning: unused variable 'subtype' [-Wunused-variable]
CSeqFeatData::ESubtype subtype = m_MainFeat.GetData().GetSubtype();
^~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/taxid_set.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/taxid_set.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services/unit_test'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/services/unit_test/blast_services_test.cpp -o blast_services_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blast_services_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lblast_services -lxnetblastcli -lxnetblast -lseqdb -lblastdb -lscoremat -lxconnect -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o blast_services_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_services_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blast_services_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/blast_services_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services/unit_test'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services/unit_test'
cd objtools/data_loaders/genbank/id1/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xreader_id1 UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/id1 TMPL=ncbi_xreader_id1 -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_convert.cpp -o writedb_convert.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_general.cpp -o writedb_general.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_column.cpp -o writedb_column.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/mask_info_registry.cpp -o mask_info_registry.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/taxid_set.cpp -o taxid_set.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/build_db.cpp -o build_db.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/id1/reader_id1.cpp:32:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/build_db.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/typeinfo.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/multisource_util.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/build_db.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/impl/criteria.hpp:57,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/criteria.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
lude /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_feature_clause.cpp -o autodef_feature_clause.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_options.cpp -o autodef_options.o
/bin/rm -f libxobjutil.so .libxobjutil.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxobjutil.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC weight.o sequence.o feature.o indexer.o seqtitle.o create_defline.o obj_sniff.o seq_loc_util.o seq_align_util.o seq_trimmer.o bioseqgaps_ci.o objutil.o feature_edit.o autodef.o autodef_feature_clause_base.o autodef_source_desc.o autodef_available_modifier.o autodef_mod_combo.o autodef_source_group.o autodef_feature_clause.o autodef_options.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lxobjmgr -lseqset -lseq -lpub -lbiblio -lgeneral -lxser -lsequtil -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjutil.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxobjutil.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libxobjutil.so
/bin/ln -f .xobjutil.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.xobjutil.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util'
cd objtools/data_loaders/genbank/id2/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xreader_id2 UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/id2 TMPL=ncbi_xreader_id2 -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/id2/reader_id2.cpp:32:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/cache/reader_cache.cpp -o reader_cache.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/cache/writer_cache.cpp -o writer_cache.o
/bin/rm -f libncbi_xreader_cache.a .libncbi_xreader_cache.a.stamp
/bin/rm -f libncbi_xreader_cache.so .libncbi_xreader_cache.so.stamp
ar cr libncbi_xreader_cache.a reader_cache.o writer_cache.o
/usr/bin/g++ -std=gnu++11 -shared -o libncbi_xreader_cache.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC reader_cache.o writer_cache.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxconnect -lxcompress -lxser -lsequtil -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_cache.a /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libncbi_xreader_cache.a /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libncbi_xreader_cache.a
/bin/ln -f .ncbi_xreader_cache-static.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.ncbi_xreader_cache-static.dep
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_cache.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libncbi_xreader_cache.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libncbi_xreader_cache.so
/bin/ln -f .ncbi_xreader_cache.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.ncbi_xreader_cache.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache'
cd objtools/blast/blastdb_format/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blastdb_format UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format TMPL=blastdb_format -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/blastdb_seqid.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/blastdb_dataextract.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/blastdb_dataextract.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/blastdb_seqid.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/blastdb_seqid.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_formatter.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/seq_formatter.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/blastdb_seqid.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/blastdb_formatter.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/blastdb_formatter.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/blastdb_seqid.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/invalid_data_exception.hpp:31,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/blastdb_dataextract.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/invalid_data_exception.hpp:31,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/blastdb_formatter.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/blastdb_seqid.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_formatter.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/seq_formatter.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/id1/reader_id1.cpp -o reader_id1.o
/bin/rm -f libncbi_xreader_id1.a .libncbi_xreader_id1.a.stamp
/bin/rm -f libncbi_xreader_id1.so .libncbi_xreader_id1.so.stamp
ar cr libncbi_xreader_id1.a reader_id1.o
/usr/bin/g++ -std=gnu++11 -shared -o libncbi_xreader_id1.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC reader_id1.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxconnect -lxcompress -lxser -lsequtil -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id1.a /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libncbi_xreader_id1.a /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libncbi_xreader_id1.a
/bin/ln -f .ncbi_xreader_id1-static.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.ncbi_xreader_id1-static.dep
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id1.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libncbi_xreader_id1.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libncbi_xreader_id1.so
/bin/ln -f .ncbi_xreader_id1.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.ncbi_xreader_id1.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1'
cd objtools/data_loaders/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xloader_blastdb_rmt UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb TMPL=ncbi_xloader_blastdb_rmt -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:85:69: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
CSeqFormatterConfig config = CSeqFormatterConfig());
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:96:85: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
void DumpAll(CSeqDB& blastdb, CSeqFormatterConfig config = CSeqFormatterConfig());
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:85:68: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
CSeqFormatterConfig config = CSeqFormatterConfig());
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:96:84: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
void DumpAll(CSeqDB& blastdb, CSeqFormatterConfig config = CSeqFormatterConfig());
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:49:74: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
CSeqFormatterConfig config /* = CSeqFormatterConfig() */)
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:270:72: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
void CSeqFormatter::DumpAll(CSeqDB& blastdb, CSeqFormatterConfig config)
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/blastdb_dataextract.cpp: In member function 'std::__cxx11::string ncbi::CBlastDBExtractor::ExtractLeafTaxIds()':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/blastdb_dataextract.cpp:396:24: warning: variable 'taxids_iter' set but not used [-Wunused-but-set-variable]
set<int>::iterator taxids_iter = taxids.begin();
^~~~~~~~~~~
IC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/multisource_util.cpp -o multisource_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/criteria.cpp -o criteria.o
/bin/rm -f libwritedb.so .libwritedb.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libwritedb.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC writedb.o writedb_impl.o writedb_volume.o writedb_files.o writedb_isam.o writedb_gimask.o writedb_convert.o writedb_general.o writedb_column.o mask_info_registry.o taxid_set.o build_db.o multisource_util.o criteria.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqdb -lxobjread -lxobjmgr -lblastdb -lseqset -lseq -lgeneral -lxser -lsequtil -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libwritedb.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libwritedb.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libwritedb.so
/bin/ln -f .writedb.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.writedb.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer'
cd objtools/cleanup/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=cleanup UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/cleanup TMPL=cleanup -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/blastdb/bdbloader_rmt.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb/bdbloader_rmt.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/blastdb/blastdb_adapter.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb/remote_blastdb_adapter.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb/remote_blastdb_adapter.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqset/Seq_entry_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqset/Seq_entry.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/autogenerated_cleanup.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/autogenerated_cleanup.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqset/Seq_entry_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqset/Seq_entry.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/autogenerated_extended_cleanup.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/autogenerated_extended_cleanup.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/cleanup.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/cleanup_utils.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/cleanup_utils.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqset/Seq_entry_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqset/Seq_entry.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/autogenerated_extended_cleanup.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/autogenerated_extended_cleanup.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqset/Seq_entry_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqset/Seq_entry.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/autogenerated_cleanup.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/autogenerated_cleanup.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/cleanup.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/id2/reader_id2.cpp -o reader_id2.o
/bin/rm -f libncbi_xreader_id2.a .libncbi_xreader_id2.a.stamp
/bin/rm -f libncbi_xreader_id2.so .libncbi_xreader_id2.so.stamp
ar cr libncbi_xreader_id2.a reader_id2.o
/usr/bin/g++ -std=gnu++11 -shared -o libncbi_xreader_id2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC reader_id2.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxconnect -lxcompress -lxser -lsequtil -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id2.a /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libncbi_xreader_id2.a /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libncbi_xreader_id2.a
/bin/ln -f .ncbi_xreader_id2-static.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.ncbi_xreader_id2-static.dep
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id2.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libncbi_xreader_id2.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libncbi_xreader_id2.so
/bin/ln -f .ncbi_xreader_id2.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.ncbi_xreader_id2.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2'
cd algo/blast/unit_tests/seqdb_reader/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=seqdb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/cleanup.cpp: In static member function 'static bool ncbi::objects::CCleanup::x_HasShortIntron(const ncbi::objects::CSeq_loc&, size_t)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/cleanup.cpp:2623:68: warning: comparison of integer expressions of different signedness: 'long int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare]
if (abs((long int)this_start - (long int)prev_end) < min_len) {
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/seq_writer.cpp -o seq_writer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/blastdb_dataextract.cpp -o blastdb_dataextract.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/blastdb_formatter.cpp -o blastdb_formatter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/seq_formatter.cpp -o seq_formatter.o
/bin/rm -f libblastdb_format.so .libblastdb_format.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libblastdb_format.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC seq_writer.o blastdb_dataextract.o blastdb_formatter.o seq_formatter.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqdb -lxobjutil -lxobjmgr -lseq -lxser -lsequtil -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastdb_format.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libblastdb_format.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libblastdb_format.so
/bin/ln -f .blastdb_format.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.blastdb_format.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format'
cd objtools/blast/gene_info_reader/demo/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=gene_info_reader LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/demo'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/demo'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/demo'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/demo'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/demo'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/gene_info_reader/demo TMPL=gene_info_reader -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbexpert.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/gene_info_reader/demo/gene_info_reader_app.cpp:38:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_autoinit.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/newcleanupp.cpp:39:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb/bdbloader_rmt.cpp -o bdbloader_rmt.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb/remote_blastdb_adapter.cpp -o remote_blastdb_adapter.o
/bin/rm -f libncbi_xloader_blastdb_rmt.so .libncbi_xloader_blastdb_rmt.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libncbi_xloader_blastdb_rmt.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC bdbloader_rmt.o remote_blastdb_adapter.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lncbi_xloader_blastdb -lblast_services -lxobjmgr -lseq -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_blastdb_rmt.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libncbi_xloader_blastdb_rmt.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libncbi_xloader_blastdb_rmt.so
/bin/ln -f .ncbi_xloader_blastdb_rmt.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.ncbi_xloader_blastdb_rmt.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
cd objtools/blast/seqdb_reader/demo/ && NCBI_BUT_EXPENDABLE=' (but expendable)' /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=seqdb_demo LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/demo'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/demo'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/demo'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/demo'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/demo'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/demo TMPL=seqdb_demo -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbexpert.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/demo/seqdb_demo.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_autoinit.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/newcleanupp.cpp:39:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/demo'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/gene_info_reader/demo/gene_info_reader_app.cpp -o gene_info_reader_app.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie gene_info_reader_app.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lgene_info -lxobjutil -lseqdb -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -ldl -lm -lpthread -o gene_info_reader
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f gene_info_reader /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f gene_info_reader /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/gene_info_reader
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/demo'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/demo'
cd objtools/blast/seqdb_reader/test/ && NCBI_BUT_EXPENDABLE=' (but expendable)' /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=seqdb_perf LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/test'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/test'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/test'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/test'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/test'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/test TMPL=seqdb_perf -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp: In member function 'void seqdb::CSeqDBIsam_32bit_GI::test_method()':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp:4347:45: warning: integer overflow in expression of type 'long int' results in '-1073741824' [-Woverflow]
const Uint4 big_gi = 3L * 1024L * 1024L * 1024L; // 3 "billion"
~~~~~~~~~~~~~~~~~~~^~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/newcleanupp.cpp: In member function 'void ncbi::objects::CNewCleanup_imp::x_RemoveFlankingQuotes(std::__cxx11::string&)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/newcleanupp.cpp:7071:22: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare]
for( ; first_pos <= last_pos ; ++first_pos, --last_pos ) {
~~~~~~~~~~^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/newcleanupp.cpp:7085:19: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare]
if( first_pos > last_pos ) {
~~~~~~~~~~^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/newcleanupp.cpp: In member function 'void ncbi::objects::CNewCleanup_imp::RnarefGenBC(ncbi::objects::CRNA_ref&)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/newcleanupp.cpp:8276:10: warning: unused variable 'changed' [-Wunused-variable]
bool changed = false;
^~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/newcleanupp.cpp: In member function 'void ncbi::objects::CNewCleanup_imp::RnaFeatBC(ncbi::objects::CRNA_ref&, ncbi::objects::CSeq_feat&)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/newcleanupp.cpp:9168:102: warning: enum constant in boolean context [-Wint-in-bool-context]
(rna.GetType() == CRNA_ref::eType_mRNA || rna.GetType() == CRNA_ref::eType_rRNA || CRNA_ref::eType_tRNA) &&
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/newcleanupp.cpp: In member function 'void ncbi::objects::CNewCleanup_imp::x_FixStructuredCommentKeywords(ncbi::objects::CBioseq&)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/newcleanupp.cpp:10153:22: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=]
} catch (CException) {
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/newcleanupp.cpp:10155:18: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=]
} catch (CException) {
^~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/demo'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/demo/seqdb_demo.cpp -o seqdb_demo.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie seqdb_demo.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqdb -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -ldl -lm -lpthread -o seqdb_demo
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_demo /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f seqdb_demo /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/seqdb_demo
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/demo'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/demo'
cd objtools/blast/seqdb_writer/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=writedb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/unit_test TMPL=writedb_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/unit_test/criteria_unit_test.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/test'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp -o seqdb_perf.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie seqdb_perf.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqdb -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -ldl -lm -lpthread -o seqdb_perf
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_perf /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f seqdb_perf /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/seqdb_perf
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/test'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/test'
cd objtools/seqmasks_io/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqmasks_io UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io TMPL=seqmasks_io -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbexpert.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/seqmasks_io/mask_cmdline_args.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_cmdline_args.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_fasta_reader.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_bdb_reader.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_writer.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_fasta_reader.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_bdb_reader.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_writer_fasta.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbexpert.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_writer.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_cmdline_args.cpp -o mask_cmdline_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_bdb_reader.cpp -o mask_bdb_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_fasta_reader.cpp -o mask_fasta_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_writer.cpp -o mask_writer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_writer_fasta.cpp -o mask_writer_fasta.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_writer_int.cpp -o mask_writer_int.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp: In member function 'void writedb::CSeqDBIsam_32bit_GI::test_method()':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:2815:45: warning: integer overflow in expression of type 'long int' results in '-1073741824' [-Woverflow]
const Uint4 big_gi = 3L * 1024L * 1024L * 1024L; // 3 "billion"
~~~~~~~~~~~~~~~~~~~^~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/seqmasks_io/mask_writer.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/seqmasks_io/mask_writer_int.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_writer_int.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/seqmasks_io/mask_writer.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/seqmasks_io/mask_writer_tab.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_writer_tab.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/seqmasks_io/mask_writer.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/seqmasks_io/mask_writer_seqloc.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_writer_seqloc.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/seqmasks_io/mask_writer.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/seqmasks_io/mask_writer_blastdb_maskinfo.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_writer_blastdb_maskinfo.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_writer_tab.cpp -o mask_writer_tab.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_writer_seqloc.cpp -o mask_writer_seqloc.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_writer_blastdb_maskinfo.cpp -o mask_writer_blastdb_maskinfo.o
/bin/rm -f libseqmasks_io.so .libseqmasks_io.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libseqmasks_io.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC mask_cmdline_args.o mask_bdb_reader.o mask_fasta_reader.o mask_writer.o mask_writer_fasta.o mask_writer_int.o mask_writer_tab.o mask_writer_seqloc.o mask_writer_blastdb_maskinfo.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqdb -lxobjread -lxobjutil -lxobjmgr -lblastdb -lseqset -lseq -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqmasks_io.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libseqmasks_io.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libseqmasks_io.so
/bin/ln -f .seqmasks_io.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.seqmasks_io.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io'
cd algo/blast/dbindex/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xalgoblastdbindex UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex TMPL=xalgoblastdbindex -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/dbindex/sequence_istream_bdb.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/sequence_istream_bdb.cpp:39:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/sequence_istream_fasta.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex.cpp:39:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex_factory.cpp:40:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/sequence_istream_fasta.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex.cpp:39:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex_factory.cpp:40:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex.cpp: In function 'const ncbi::blastdbindex::SIndexHeader ncbi::blastdbindex::ReadIndexHeader(void*) [with bool LEGACY = true]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex.cpp:306:19: warning: variable 'tmp' set but not used [-Wunused-but-set-variable]
unsigned long tmp;
^~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex_factory.cpp: In member function 'std::__cxx11::string ncbi::blastdbindex::CSubjectMap_Factory_Base::extractSeqVector(ncbi::blastdbindex::CSubjectMap_Factory_Base::TSeqData&)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex_factory.cpp:658:53: warning: 'std::__cxx11::string ncbi::objects::sequence::GetTitle(const ncbi::objects::CBioseq_Handle&, ncbi::objects::sequence::TGetTitleFlags)' is deprecated [-Wdeprecated-declarations]
string idstr = objects::sequence::GetTitle( bsh );
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex_factory.cpp:42:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/util/sequence.hpp:289:8: note: declared here
string GetTitle(const CBioseq_Handle& hnd, TGetTitleFlags flags = 0);
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex_factory.cpp:658:53: warning: 'std::__cxx11::string ncbi::objects::sequence::GetTitle(const ncbi::objects::CBioseq_Handle&, ncbi::objects::sequence::TGetTitleFlags)' is deprecated [-Wdeprecated-declarations]
string idstr = objects::sequence::GetTitle( bsh );
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex_factory.cpp:42:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/util/sequence.hpp:289:8: note: declared here
string GetTitle(const CBioseq_Handle& hnd, TGetTitleFlags flags = 0);
^~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex_search.cpp:38:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbexpert.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:35:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long int&}; _Tp = long long int; _Alloc = std::allocator<long long int>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<long long int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex_search.cpp:38:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In constructor 'ncbi::blastdbindex::CDbIndex::CSearchResults::CSearchResults(long unsigned int, ncbi::blastdbindex::CDbIndex::TSeqNum, ncbi::blastdbindex::CDbIndex::TSeqNum, const TWord*, size_t)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbexpert.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:35:
/usr/include/c++/8/bits/stl_vector.h: In member function 'void writedb::BinaryListBuilder::test_method()':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'ncbi::CConstRef<ncbi::blastdbindex::CDbIndex::CSearchResults> ncbi::blastdbindex::CSearch_Base<LEGACY, NHITS, derived_t>::operator()() [with bool LEGACY = true; long unsigned int NHITS = 1; derived_t = ncbi::blastdbindex::CSearch<true, 1>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'ncbi::CConstRef<ncbi::blastdbindex::CDbIndex::CSearchResults> ncbi::blastdbindex::CSearch_Base<LEGACY, NHITS, derived_t>::operator()() [with bool LEGACY = false; long unsigned int NHITS = 1; derived_t = ncbi::blastdbindex::CSearch<false, 1>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
^~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex'
/usr/bin/g++ -std=gnu++11 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/sequence_istream_fasta.cpp -o sequence_istream_fasta.o
/usr/bin/g++ -std=gnu++11 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/sequence_istream_bdb.cpp -o sequence_istream_bdb.o
/usr/bin/g++ -std=gnu++11 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex.cpp -o dbindex.o
/usr/bin/g++ -std=gnu++11 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex_factory.cpp -o dbindex_factory.o
/usr/bin/g++ -std=gnu++11 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex_search.cpp -o dbindex_search.o
/bin/rm -f libxalgoblastdbindex.so .libxalgoblastdbindex.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxalgoblastdbindex.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC sequence_istream_fasta.o sequence_istream_bdb.o dbindex.o dbindex_factory.o dbindex_search.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast -lseqdb -lxobjread -lxobjutil -lxobjmgr -lseqset -lseq -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgoblastdbindex.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxalgoblastdbindex.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libxalgoblastdbindex.so
/bin/ln -f .xalgoblastdbindex.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.xalgoblastdbindex.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex'
cd algo/winmask/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xalgowinmask UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask TMPL=xalgowinmask -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_istat.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_score.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_score_mean_glob.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_score_mean_glob.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_window.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_window.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_score_min.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_window.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_score_mean.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker.cpp: In member function 'double ncbi::CSeqMasker::MergeAvg(std::__cxx11::list<ncbi::CSeqMasker::mitem>::iterator, const iterator&, Uint4) const':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker.cpp:404:8: note: parameter passing for argument of type 'std::__cxx11::list<ncbi::CSeqMasker::mitem>::iterator' {aka 'std::_List_iterator<ncbi::CSeqMasker::mitem>'} changed in GCC 7.1
double CSeqMasker::MergeAvg( TMList::iterator mi,
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker.cpp: In member function 'void ncbi::CSeqMasker::Merge(ncbi::CSeqMasker::TMList&, std::__cxx11::list<ncbi::CSeqMasker::mitem>::iterator, ncbi::CSeqMasker::TMList&, std::__cxx11::list<ncbi::CSeqMasker::mitem>::iterator&) const':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker.cpp:418:6: note: parameter passing for argument of type 'std::__cxx11::list<ncbi::CSeqMasker::mitem>::iterator' {aka 'std::_List_iterator<ncbi::CSeqMasker::mitem>'} changed in GCC 7.1
void CSeqMasker::Merge( TMList & m, TMList::iterator mi,
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker.cpp: In member function 'ncbi::CSeqMasker::TMaskList* ncbi::CSeqMasker::DoMask(const ncbi::objects::CSeqVector&, ncbi::TSeqPos, ncbi::TSeqPos) const':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker.cpp:305:32: note: parameter passing for argument of type 'std::__cxx11::list<ncbi::CSeqMasker::mitem>::iterator' {aka 'std::_List_iterator<ncbi::CSeqMasker::mitem>'} changed in GCC 7.1
lavg = MergeAvg( k, tmp, unit_size );
~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker.cpp:311:32: note: parameter passing for argument of type 'std::__cxx11::list<ncbi::CSeqMasker::mitem>::iterator' {aka 'std::_List_iterator<ncbi::CSeqMasker::mitem>'} changed in GCC 7.1
ravg = MergeAvg( ii, j, unit_size );
~~~~~~~~^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker.cpp:328:42: note: parameter passing for argument of type 'std::__cxx11::list<ncbi::CSeqMasker::mitem>::iterator' {aka 'std::_List_iterator<ncbi::CSeqMasker::mitem>'} changed in GCC 7.1
k->avg = MergeAvg( k, --j, unit_size );
~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker.cpp:354:34: note: parameter passing for argument of type 'std::__cxx11::list<ncbi::CSeqMasker::mitem>::iterator' {aka 'std::_List_iterator<ncbi::CSeqMasker::mitem>'} changed in GCC 7.1
k->avg = MergeAvg( k, --j, unit_size );
~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker.cpp:386:34: note: parameter passing for argument of type 'std::__cxx11::list<ncbi::CSeqMasker::mitem>::iterator' {aka 'std::_List_iterator<ncbi::CSeqMasker::mitem>'} changed in GCC 7.1
k->avg = MergeAvg( k, j, unit_size );
~~~~~~~~^~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker.cpp -o seq_masker.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_score_mean.cpp -o seq_masker_score_mean.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_score_mean_glob.cpp -o seq_masker_score_mean_glob.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_score_min.cpp -o seq_masker_score_min.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_util.cpp -o seq_masker_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_window.cpp -o seq_masker_window.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=formatIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_util.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_util.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_window.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_window.cpp:38:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_window.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_window_ambig.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_window_ambig.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_util.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_window_pattern.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_util.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_window_pattern_ambig.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_ostat_factory.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_ostat_factory.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_window_ambig.cpp -o seq_masker_window_ambig.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_window_pattern.cpp -o seq_masker_window_pattern.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_window_pattern_ambig.cpp -o seq_masker_window_pattern_ambig.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_ostat_factory.cpp -o seq_masker_ostat_factory.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_ostat.cpp -o seq_masker_ostat.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_ostat_ascii.cpp -o seq_masker_ostat_ascii.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/incluIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_ostat.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_ostat.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_ostat_ascii.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_istat_ascii.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_istat_ascii.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_uset_simple.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_uset_simple.cpp:38:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_istat_factory.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_istat_factory.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_ostat.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_ostat_bin.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_ostat_bin.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_uset_array.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_uset_array.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
de /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_istat_ascii.cpp -o seq_masker_istat_ascii.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_uset_simple.cpp -o seq_masker_uset_simple.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_istat_factory.cpp -o seq_masker_istat_factory.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_ostat_bin.cpp -o seq_masker_ostat_bin.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_uset_array.cpp -o seq_masker_uset_array.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_istat_bin.cpp -o seq_masker_istat_bin.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_ostat_opt.cpp -o seq_masker_ostat_opt.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_istat_bin.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp -o writedb_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/unit_test/criteria_unit_test.cpp -o criteria_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie writedb_unit_test.o criteria_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lwritedb -lseqdb -lxobjread -lvariation -lcreaders -lsubmit -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -ldl -lm -lpthread -o writedb_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f writedb_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f writedb_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/writedb_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test'
cd objtools/alnmgr/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=alnmgr UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr TMPL=alnmgr -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_ostat_opt.cpp:38:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_ostat.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_ostat_opt.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_ostat_opt_ascii.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_ostat_opt_ascii.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/aln_builders.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/aln_builders.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/aln_seqid.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/aln_seqid.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/aln_converters.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/aln_generators.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/autogenerated_cleanup.cpp -o autogenerated_cleanup.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/autogenerated_extended_cleanup.cpp -o autogenerated_extended_cleanup.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/cleanup.cpp -o cleanup.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/cleanup_utils.cpp -o cleanup_utils.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/newcleanupp.cpp -o newcleanupp.o
/bin/rm -f libxcleanup.so .libxcleanup.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxcleanup.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC autogenerated_cleanup.o autogenerated_extended_cleanup.o cleanup.o cleanup_utils.o newcleanupp.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lxobjutil -lvalid -lsubmit -ltaxon3 -lxregexp -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lpcre
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcleanup.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxcleanup.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libxcleanup.so
/bin/ln -f .xcleanup.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.xcleanup.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup'
cd objtools/data_loaders/genbank/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xloader_genbank UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank TMPL=ncbi_xloader_genbank -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_ostat.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_ostat_opt.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_ostat_opt_bin.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_ostat_opt_bin.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/gbloader.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_uset_hash.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_uset_hash.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_istat_oascii.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_istat_oascii.cpp:38:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/genbank/impl/gbload_util.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/gbload_util.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/aln_generators.cpp: In function 'void ncbi::InitSplicedsegFromPairwiseAln(ncbi::objects::CSpliced_seg&, const ncbi::CPairwiseAln&, ncbi::objects::CScope*)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/aln_generators.cpp:538:44: warning: typedef 'TAlnRngColl' locally defined but not used [-Wunused-local-typedefs]
typedef CAlignRangeCollection<TAlnRng> TAlnRngColl;
^~~~~~~~~~~
ile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_ostat_opt_ascii.cpp -o seq_masker_ostat_opt_ascii.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_uset_hash.cpp -o seq_masker_uset_hash.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_istat_oascii.cpp -o seq_masker_istat_oascii.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_ostat_opt_bin.cpp -o seq_masker_ostat_opt_bin.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_istat_obinary.cpp -o seq_masker_istat_obinary.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_cache_boost.cpp -o seq_masker_cache_boost.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/pairwise_aln.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/aln_serial.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/aln_serial.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_istat_obinary.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_istat_obinary.cpp:38:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_cache_boost.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_cache_boost.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_util.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_counts_converter.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_istat_oascii.cpp: In constructor 'ncbi::CSeqMaskerIstatOAscii::CSeqMaskerIstatOAscii(const string&, Uint4, Uint4, Uint4, Uint4, Uint4, Uint4, Uint4)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_istat_oascii.cpp:113:60: warning: 'unit_size' may be used uninitialized in this function [-Wmaybe-uninitialized]
if( k == 0U || k > (Uint4)(2*unit_size - 1) )
~~~~~~~~~~~~~^~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_dup_table.cpp:40:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp -o seqdb_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie seqdb_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lseqdb -lwritedb -lxobjutil -lblastdb -lxobjread -lvariation -lcreaders -lsubmit -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -ldl -ldl -lm -lpthread -o seqdb_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f seqdb_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/seqdb_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader'
cd algo/blast/dbindex/makeindex/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=makeindex LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex/makeindex'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex/makeindex'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex/makeindex'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex/makeindex'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex/makeindex'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/makeindex TMPL=makeindex -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/align_range.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alndiag.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alndiag.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/makeindex/mkindex_app.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/makeindex/mkindex_app.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/dbindex/sequence_istream_fasta.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/makeindex/main.cpp:42:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_gen_counts.cpp:39:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/util/sequence.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_util.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/winmask/win_mask_config.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_config.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/makeindex/mkindex_app.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/makeindex/mkindex_app.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/dbindex/sequence_istream_fasta.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/makeindex/main.cpp:42:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_dup_table.cpp:40:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/aln_builders.cpp -o aln_builders.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/aln_converters.cpp -o aln_converters.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/aln_generators.cpp -o aln_generators.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/aln_seqid.cpp -o aln_seqid.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/aln_serial.cpp -o aln_serial.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alndiag.cpp -o alndiag.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/util/sequence.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_util.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_gen_counts.cpp:39:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnmap.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmapprint.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnmap.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmap.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/winmask/win_mask_config.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_config.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnseq.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnmatch.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmatch.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_util.cpp: In member function 'virtual bool ncbi::CWinMaskUtil::CIdSet_TextMatch::find(const ncbi::objects::CBioseq_Handle&) const':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_util.cpp:130:45: warning: 'std::__cxx11::string ncbi::objects::sequence::GetTitle(const ncbi::objects::CBioseq_Handle&, ncbi::objects::sequence::TGetTitleFlags)' is deprecated [-Wdeprecated-declarations]
string id_str = sequence::GetTitle( bsh );
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_util.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/util/sequence.hpp:289:8: note: declared here
string GetTitle(const CBioseq_Handle& hnd, TGetTitleFlags flags = 0);
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_util.cpp:130:45: warning: 'std::__cxx11::string ncbi::objects::sequence::GetTitle(const ncbi::objects::CBioseq_Handle&, ncbi::objects::sequence::TGetTitleFlags)' is deprecated [-Wdeprecated-declarations]
string id_str = sequence::GetTitle( bsh );
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_util.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/util/sequence.hpp:289:8: note: declared here
string GetTitle(const CBioseq_Handle& hnd, TGetTitleFlags flags = 0);
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_config.cpp: In static member function 'static void ncbi::CWinMaskConfig::AddWinMaskArgs(ncbi::CArgDescriptions&, ncbi::CWinMaskConfig::EAppType, bool)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_config.cpp:181:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if(type == eAny || type >= eGenerateMasksWithDuster)
^~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_config.cpp:185:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
arg_desc.AddDefaultKey( "dust_level", "dust_level",
^~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmatch.cpp: In static member function 'static bool ncbi::objects::CAlnMixMatches::x_CompareChainScores(const ncbi::CRef<ncbi::objects::CAlnMixMatch>&, const ncbi::CRef<ncbi::objects::CAlnMixMatch>&)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmatch.cpp:76:55: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
match1->m_ChainScore == match2->m_ChainScore &&
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
match1->m_Score > match2->m_Score ||
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmatch.cpp: In member function 'void ncbi::objects::CAlnMixMatches::Add(const ncbi::objects::CDense_seg&, ncbi::objects::CAlnMixMatches::TAddFlags)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmatch.cpp:192:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
(aln_seq1->m_StrandScore > 0 &&
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
strand1 == eNa_strand_minus ||
~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmatch.cpp:196:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
aln_seq2->m_StrandScore > 0 &&
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
strand2 == eNa_strand_minus ||
~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmatch.cpp:198:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
aln_seq2->m_StrandScore < 0 &&
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
strand2 != eNa_strand_minus)) {
~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmap.cpp: In member function 'ncbi::CRef<ncbi::objects::CSeq_align> ncbi::objects::CAlnMap::CreateAlignFromRange(const std::vector<int>&, ncbi::TSignedSeqPos, ncbi::TSignedSeqPos, ncbi::objects::CAlnMap::ESegmentTrimFlag)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmap.cpp:1467:35: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CAlnMap::TNumrow' {aka 'int'} and 'std::vector<int>::size_type' {aka 'unsigned int'} [-Wsign-compare]
for (TNumrow row = 0; row < selected_rows.size(); row++) {
~~~~^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_istat.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_istat.cpp:32:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Seq_align_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Seq_align.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnmerger.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmerger.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex/makeindex'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/makeindex/main.cpp -o main.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/makeindex/mkindex_app.cpp -o mkindex_app.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie main.o mkindex_app.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lxalgoblastdbindex -lblast -lcomposition_adjustment -lseqdb -lblastdb -lxobjread -lvariation -lcreaders -lsubmit -lxobjutil -ltables -lxconnect -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -ldl -lm -lpthread -o makembindex
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f makembindex /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f makembindex /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/makembindex
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex/makeindex'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex/makeindex'
cd objtools/blast/blastdb_format/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastdb_format_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format/unit_test'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format/unit_test'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format/unit_test'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format/unit_test'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format/unit_test'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test TMPL=blastdb_format_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Seq_align_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Seq_align.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnmix.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmix.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/blastdb_seqid.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/blastdb_seqid.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_formatter.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_formatter_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnmerger.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmerger.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnsegments.hpp: In member function 'bool ncbi::objects::CAlnMixSegment::SSeqComp::operator()(const ncbi::objects::CAlnMixSeq*, const ncbi::objects::CAlnMixSeq*) const':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnsegments.hpp:102:51: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
seq1->m_SeqIdx == seq2->m_SeqIdx &&
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
seq1->m_ChildIdx < seq2->m_ChildIdx;
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/gbloader.cpp -o gbloader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/gbload_util.cpp -o gbload_util.o
/bin/rm -f libncbi_xloader_genbank.a .libncbi_xloader_genbank.a.stamp
/bin/rm -f libncbi_xloader_genbank.so .libncbi_xloader_genbank.so.stamp
ar cr libncbi_xloader_genbank.a gbloader.o gbload_util.o
/usr/bin/g++ -std=gnu++11 -shared -o libncbi_xloader_genbank.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC gbloader.o gbload_util.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxconnect -lxcompress -lxser -lsequtil -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_genbank.a /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libncbi_xloader_genbank.a /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libncbi_xloader_genbank.a
/bin/ln -f .ncbi_xloader_genbank-static.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.ncbi_xloader_genbank-static.dep
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_genbank.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libncbi_xloader_genbank.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libncbi_xloader_genbank.so
/bin/ln -f .ncbi_xloader_genbank.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.ncbi_xloader_genbank.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmerger.cpp: In member function 'void ncbi::objects::CAlnMixMerger::x_Merge()':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmerger.cpp:140:40: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
if (m_AlnMixMatches->m_ContainsNA && m_AlnMixMatches->m_ContainsAA ||
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
cd objtools/simple/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xobjsimple UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmerger.cpp: In member function 'void ncbi::objects::CAlnMixMerger::x_CreateDenseg()':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmerger.cpp:1210:44: warning: comparison of integer expressions of different signedness: 'const unsigned int' and 'int' [-Wsign-compare]
if (start_its_i->second->first != -1) {
~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmerger.cpp:1232:40: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
if (m_AlnMixMatches->m_ContainsNA && m_AlnMixMatches->m_ContainsAA ||
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/simple TMPL=xobjsimple -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnmerger.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmix.cpp:38:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnsegments.hpp: In member function 'bool ncbi::objects::CAlnMixSegment::SSeqComp::operator()(const ncbi::objects::CAlnMixSeq*, const ncbi::objects::CAlnMixSeq*) const':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnsegments.hpp:102:51: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
seq1->m_SeqIdx == seq2->m_SeqIdx &&
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
seq1->m_ChildIdx < seq2->m_ChildIdx;
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnmap.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnpos_ci.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnpos_ci.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/simple/simple_om.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/simple/simple_om.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/blastdb_seqid.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/blastdb_seqid.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_formatter.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_formatter_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnsegments.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnsegments.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_counts_converter.cpp -o win_mask_counts_converter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_dup_table.cpp -o win_mask_dup_table.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_gen_counts.cpp -o win_mask_gen_counts.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_util.cpp -o win_mask_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_config.cpp -o win_mask_config.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_istat.cpp -o seq_masker_istat.o
/bin/rm -f libxalgowinmask.so .libxalgowinmask.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxalgowinmask.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC seq_masker.o seq_masker_score_mean.o seq_masker_score_mean_glob.o seq_masker_score_min.o seq_masker_util.o seq_masker_window.o seq_masker_window_ambig.o seq_masker_window_pattern.o seq_masker_window_pattern_ambig.o seq_masker_ostat_factory.o seq_masker_ostat.o seq_masker_ostat_ascii.o seq_masker_istat_ascii.o seq_masker_uset_simple.o seq_masker_istat_factory.o seq_masker_ostat_bin.o seq_masker_uset_array.o seq_masker_istat_bin.o seq_masker_ostat_opt.o seq_masker_ostat_opt_ascii.o seq_masker_uset_hash.o seq_masker_istat_oascii.o seq_masker_ostat_opt_bin.o seq_masker_istat_obinary.o seq_masker_cache_boost.o win_mask_counts_converter.o win_mask_dup_table.o win_mask_gen_counts.o win_mask_util.o win_mask_config.o seq_masker_istat.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqmasks_io -lxobjread -lxobjutil -lxobjmgr -lseq -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgowinmask.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxalgowinmask.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libxalgowinmask.so
/bin/ln -f .xalgowinmask.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.xalgowinmask.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask'
cd app/dustmasker/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=dustmasker LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/dustmasker'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/dustmasker'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/dustmasker'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/dustmasker'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/dustmasker'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/dustmasker TMPL=dustmasker -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:85:69: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
CSeqFormatterConfig config = CSeqFormatterConfig());
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:96:85: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
void DumpAll(CSeqDB& blastdb, CSeqFormatterConfig config = CSeqFormatterConfig());
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:85:68: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
CSeqFormatterConfig config = CSeqFormatterConfig());
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:96:84: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
void DumpAll(CSeqDB& blastdb, CSeqFormatterConfig config = CSeqFormatterConfig());
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:39:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestNoFormatSpecifier::test_method()':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:55:41: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
BOOST_REQUIRE_THROW(CSeqFormatter f(format_spec, db, std::cout),
^~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:102:9: note: in definition of macro 'BOOST_CHECK_THROW_IMPL'
S; \
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:39:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestInvalidFormatSpecifiers_Empty::test_method()':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:119:57: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
#define NcbiEmptyString NCBI_NS_NCBI::CNcbiEmptyString::Get()
^~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:102:9: note: in definition of macro 'BOOST_CHECK_THROW_IMPL'
S; \
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:120:19: note: in expansion of macro 'NcbiEmptyString'
#define kEmptyStr NcbiEmptyString
^~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:62:41: note: in expansion of macro 'kEmptyStr'
BOOST_REQUIRE_THROW(CSeqFormatter f(kEmptyStr, db, std::cout),
^~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestInvalidFormatSpecifiers_InvalidAlgoId::test_method()':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:69:25: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
CSeqFormatterConfig config;
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:39:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:71:40: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
BOOST_REQUIRE_THROW(CSeqFormatter f("%m", db, std::cout, config),
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:102:9: note: in definition of macro 'BOOST_CHECK_THROW_IMPL'
S; \
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestValidFormatSpecifiers::test_method()':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:78:25: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
CSeqFormatterConfig config;
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:94:24: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter f(*itr, db, std::cout, config);
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:98:20: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter f("%m", db, std::cout, config);
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestRequestGiOidLength::test_method()':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:109:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter f(format_spec, db, out);
^~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestRequestSeqId::test_method()':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:151:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter f(format_spec, db, out);
^~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestRequestSeqIdLong::test_method()':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:195:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter f(format_spec, db, out);
^~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestRequestAccessionPIGTaxidTitle::test_method()':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:228:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter f(format_spec, db, out);
^~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestRequestGiGivenPIG::test_method()':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:259:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter f(format_spec, db, out);
^~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestRequestSequenceDataLength::test_method()':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:284:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter f(format_spec, db, out);
^~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestMaskedFasta::test_method()':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:314:25: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
CSeqFormatterConfig config;
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:319:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter f(format_spec, db, out, config);
^~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestMaskedSequenceData::test_method()':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:358:25: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
CSeqFormatterConfig config;
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:361:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter f(format_spec, db, out, config);
^~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnsegments.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnsegments.hpp: In member function 'bool ncbi::objects::CAlnMixSegment::SSeqComp::operator()(const ncbi::objects::CAlnMixSeq*, const ncbi::objects::CAlnMixSeq*) const':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnsegments.hpp:102:51: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
seq1->m_SeqIdx == seq2->m_SeqIdx &&
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
seq1->m_ChildIdx < seq2->m_ChildIdx;
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/dustmasker/dust_mask_app.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/dustmasker/dust_mask_app.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/dustmasker/dust_mask_app.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/dustmasker/main.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnsegments.cpp: In member function 'void ncbi::objects::CAlnMixSegments::FillUnalignedRegions()':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnsegments.cpp:311:27: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
if (plus && prev_start_plus_len < start ||
~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
S=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmap.cpp -o alnmap.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmapprint.cpp -o alnmapprint.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmatch.cpp -o alnmatch.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmerger.cpp -o alnmerger.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmix.cpp -o alnmix.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnpos_ci.cpp -o alnpos_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnsegments.cpp -o alnsegments.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/nc/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmerger.cpp: In member function 'void ncbi::objects::CAlnMixMerger::x_Merge()':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmerger.cpp:752:44: warning: 'width2' may be used uninitialized in this function [-Wmaybe-uninitialized]
while(start < start2 + len * width2) {
~~~~^~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnmap.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnseq.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnmap.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnvec.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnvec.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/simple/simple_om.cpp -o simple_om.o
/bin/rm -f libxobjsimple.so .libxobjsimple.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxobjsimple.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC simple_om.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lncbi_xloader_genbank -lxobjmgr -lseq -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjsimple.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxobjsimple.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libxobjsimple.so
/bin/ln -f .xobjsimple.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.xobjsimple.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple'
cd app/winmasker/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=winmasker LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/winmasker TMPL=winmasker -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/dustmasker/dust_mask_app.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/dustmasker/dust_mask_app.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnseq.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnsegments.hpp: In member function 'bool ncbi::objects::CAlnMixSegment::SSeqComp::operator()(const ncbi::objects::CAlnMixSeq*, const ncbi::objects::CAlnMixSeq*) const':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnsegments.hpp:102:51: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
seq1->m_SeqIdx == seq2->m_SeqIdx &&
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
seq1->m_ChildIdx < seq2->m_ChildIdx;
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnseq.cpp: In static member function 'static bool ncbi::objects::CAlnMixSequences::x_CompareChainScores(const ncbi::CRef<ncbi::objects::CAlnMixSeq>&, const ncbi::CRef<ncbi::objects::CAlnMixSeq>&)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnseq.cpp:84:51: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
seq1->m_ChainScore == seq2->m_ChainScore &&
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
seq1->m_Score > seq2->m_Score ||
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/winmasker/win_mask_app.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/winmasker/main.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnvec_iterator.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/winmasker/win_mask_app.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/dustmask/symdust.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/winmasker/win_mask_app.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnmap.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnvec.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnvecprint.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format/unit_test'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp -o seq_writer_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_formatter_unit_test.cpp -o seq_formatter_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie seq_writer_unit_test.o seq_formatter_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lblastdb_format -lxobjutil -lseqdb -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -ldl -ldl -lm -lpthread -o blastdb_format_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdb_format_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blastdb_format_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/blastdb_format_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format/unit_test'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format/unit_test'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/dustmasker'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/dustmasker/main.cpp -o main.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/dustmasker/dust_mask_app.cpp -o dust_mask_app.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie main.o dust_mask_app.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lxalgodustmask -lseqmasks_io -lxobjread -lvariation -lcreaders -lsubmit -lxobjutil -lseqdb -lblastdb -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -ldl -lm -lpthread -o dustmasker
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f dustmasker /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f dustmasker /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/dustmasker
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/dustmasker'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/dustmasker'
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/pairwise_aln.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/pairwise_aln.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/sparse_aln.hpp:34,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/sparse_aln.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnvecprint.cpp: In member function 'void ncbi::objects::CAlnVecPrinter::PopsetStyle(int, ncbi::objects::CAlnVecPrinter::EAlgorithm)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnvecprint.cpp:136:64: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
if (left_seg < 0 || seg > right_seg && right_seg > 0) {
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnvecprint.cpp: In member function 'void ncbi::objects::CAlnVecPrinter::ClustalStyle(int, ncbi::objects::CAlnVecPrinter::EAlgorithm)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnvecprint.cpp:300:64: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
if (left_seg < 0 || seg > right_seg && right_seg > 0) {
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
bi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnseq.cpp -o alnseq.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnvec.cpp -o alnvec.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnvec_iterator.cpp -o alnvec_iterator.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnvecprint.cpp -o alnvecprint.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/pairwise_aln.cpp -o pairwise_aln.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/sparse_aln.cpp -o sparse_aln.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbiIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/sparse_aln.hpp:34,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/sparse_ci.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/sparse_ci.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/sparse_aln.hpp:34,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/sparse_aln.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/winmasker/main.cpp -o main.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/winmasker/win_mask_app.cpp -o win_mask_app.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/winmasker/win_mask_sdust_masker.cpp -o win_mask_sdust_masker.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie main.o win_mask_app.o win_mask_sdust_masker.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lxalgowinmask -lxalgodustmask -lblast -lcomposition_adjustment -lseqmasks_io -lseqdb -lblastdb -ltables -lxobjread -lvariation -lcreaders -lsubmit -lxobjutil -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -ldl -lm -lpthread -o windowmasker
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f windowmasker /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f windowmasker /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/windowmasker
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/sparse_aln.cpp: In member function 'std::__cxx11::string& ncbi::CSparseAln::GetAlnSeqString(ncbi::IAlnExplorer::TNumrow, std::__cxx11::string&, const TSignedRange&, bool) const':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/sparse_aln.cpp:702:46: warning: comparison of integer expressions of different signedness: 'ncbi::COpenRange<int>::position_type' {aka 'int'} and 'size_t' {aka 'unsigned int'} [-Wsign-compare]
if (translate && aln_range.GetLength() >= trim_from + trim_to) {
~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alntext.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/score_builder_base.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/score_builder_base.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alntext.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/score_builder_base.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/score_builder_base.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
-blast+-2.7.1/c++/src/objtools/alnmgr/sparse_ci.cpp -o sparse_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alntext.cpp -o alntext.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/score_builder_base.cpp -o score_builder_base.o
/bin/rm -f libxalnmgr.so .libxalnmgr.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxalnmgr.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC aln_builders.o aln_converters.o aln_generators.o aln_seqid.o aln_serial.o alndiag.o alnmap.o alnmapprint.o alnmatch.o alnmerger.o alnmix.o alnpos_ci.o alnsegments.o alnseq.o alnvec.o alnvec_iterator.o alnvecprint.o pairwise_aln.o sparse_aln.o sparse_ci.o alntext.o score_builder_base.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lxobjutil -lxobjmgr -lseqset -lseq -lxser -ltables -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalnmgr.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxalnmgr.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libxalnmgr.so
/bin/ln -f .xalnmgr.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.xalnmgr.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr'
cd algo/blast/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xblast UNIX_PROJ="" sources= configurables=configurables.null
cd objtools/align_format/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=align_format UNIX_PROJ="" sources= configurables=configurables.null
cd objtools/format/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xformat UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/align_format TMPL=align_format -w -j4 --jobserver-auth=7,8 all
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format TMPL=xformat -w -j4 --jobserver-auth=7,8 all
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api TMPL=xblast -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_aux.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/accession_item.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/align_format/format_flags.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/align_format/format_flags.cpp:30:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_local_priv.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_local_priv.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/contig_item.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/comment_item.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/basecount_item.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_cxx.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/align_format/align_format_util.hpp:32,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/align_format/align_format_util.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/remote_blast.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_builder.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/align_format/showdefline.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/align_format/align_format_util.hpp:32,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/align_format/showalign.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/comment_item.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/accession_item.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_local_priv.cpp: In member function 'bool ncbi::blast::CBlastOptionsLocal::Validate() const':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_local_priv.cpp:387:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_local_priv.cpp:396:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'else'
return true;
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_aux.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_cxx.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/align_format/showdefline.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/align_format/tabular.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/align_format/align_format_util.hpp:32,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/align_format/showalign.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/comment_item.cpp: In function 'void ncbi::objects::s_GetAssemblyInfo(const ncbi::objects::CBioseqContext&, std::__cxx11::string&, const ncbi::objects::CUser_object&)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/comment_item.cpp:367:16: warning: unused variable 'is_html' [-Wunused-variable]
const bool is_html = ctx.Config().DoHTML();
^~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/align_format/showalign.cpp: In member function 'void ncbi::align_format::CDisplaySeqalign::DisplaySeqalign(ncbi::CNcbiOstream&)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/align_format/showalign.cpp:2044:33: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=]
} catch (CException e){
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/date_item.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/align_format/showalign.cpp: In function 'void ncbi::align_format::s_MakeDomainString(int, int, const string&, std::__cxx11::string&)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/align_format/showalign.cpp:4355:49: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string<char>::size_type' {aka 'unsigned int'} [-Wsign-compare]
for (int i = actual_first_pos, j = 0; i < domain_string.size() - 1 && j < domain_name.size(); i ++, j ++){
~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/align_format/showalign.cpp:4355:81: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string<char>::size_type' {aka 'unsigned int'} [-Wsign-compare]
for (int i = actual_first_pos, j = 0; i < domain_string.size() - 1 && j < domain_name.size(); i ++, j ++){
~~^~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/util_misc.hpp:33,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup_cxx.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/dbsource_item.cpp:32:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/accession_item.cpp -o accession_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/basecount_item.cpp -o basecount_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/comment_item.cpp -o comment_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/contig_item.cpp -o contig_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/date_item.cpp -o date_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/dbsource_item.cpp -o dbsource_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/align_format/tabular.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/defline_item.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/util_misc.hpp:33,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup_cxx.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup_cxx.cpp:1193:34: note: in expansion of macro 'THROWS'
THROWS((CBlastException))
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup_cxx.cpp:1241:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException))
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/dbsource_item.cpp:32:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_aux.cpp -o blast_aux.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_cxx.cpp -o blast_options_cxx.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_local_priv.cpp -o blast_options_local_priv.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_builder.cpp -o blast_options_builder.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup_cxx.cpp -o blast_setup_cxx.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_seqalign.cpp -o blast_seqalign.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blasIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_seqalign.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_seqalign.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_handle.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/defline_item.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/feature_item.cpp:44:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_handle.cpp: In member function 'char* ncbi::blast::CBlastOptionsHandle::GetFilterString() const':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_handle.cpp:100:36: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations]
return m_Opts->GetFilterString(); /* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_handle.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:171:27: note: declared here
NCBI_DEPRECATED char* GetFilterString() const;
^~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_handle.cpp: In member function 'void ncbi::blast::CBlastOptionsHandle::SetFilterString(const char*, bool)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_handle.cpp:106:37: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
m_Opts->SetFilterString(f, clear); /* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_handle.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_nucl_options.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_nucl_options.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/feature_item.cpp:44:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/genome_item.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/ctrl_items.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/align_format/align_format_util.hpp:32,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/align_format/align_format_util.cpp:36:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ncbi::align_format::CAlignFormatUtil::SDbInfo&}; _Tp = ncbi::align_format::CAlignFormatUtil::SDbInfo; _Alloc = std::allocator<ncbi::align_format::CAlignFormatUtil::SDbInfo>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<ncbi::align_format::CAlignFormatUtil::SDbInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<ncbi::align_format::CAlignFormatUtil::SDbInfo*, std::vector<ncbi::align_format::CAlignFormatUtil::SDbInfo> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_nucl_options.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_nucl_options.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/ctrl_items.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_nucl_options.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/disc_nucl_options.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/disc_nucl_options.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/feature_item.cpp: In function 'const string& ncbi::objects::s_AaName(int)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/feature_item.cpp:1815:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::size_t' {aka 'unsigned int'} [-Wsign-compare]
if ( idx > 0 && idx < ArraySize(s_TrnaList) ) {
~~~~^~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/feature_item.cpp: In static member function 'static std::__cxx11::string ncbi::objects::CFeatureItem::x_SeqIdWriteForTable(const ncbi::objects::CBioseq&, bool, bool)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/feature_item.cpp:5031:20: warning: variable 'patent' set but not used [-Wunused-but-set-variable]
const CSeq_id* patent = NULL;
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/feature_item.cpp:5032:20: warning: variable 'pdb' set but not used [-Wunused-but-set-variable]
const CSeq_id* pdb = NULL;
^~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_prot_options.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_advprot_options.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/psiblast_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_options.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/keywords_item.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/html/html.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/align_format/vectorscreen.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/align_format/vectorscreen.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/keywords_item.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/align_format/align_format_util.hpp:32,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/align_format/align_format_util.cpp:36:
/usr/include/c++/8/bits/stl_vector.h: In static member function 'static void ncbi::align_format::CAlignFormatUtil::GetBlastDbInfo(std::vector<ncbi::align_format::CAlignFormatUtil::SDbInfo>&, const string&, bool, int, bool)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::align_format::CAlignFormatUtil::SDbInfo*, std::vector<ncbi::align_format::CAlignFormatUtil::SDbInfo> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::align_format::CAlignFormatUtil::SDbInfo*, std::vector<ncbi::align_format::CAlignFormatUtil::SDbInfo> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_nucl_options.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/disc_nucl_options.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/disc_nucl_options.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/align_format/format_flags.cpp -o format_flags.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/align_format/align_format_util.cpp -o align_format_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/align_format/showdefline.cpp -o showdefline.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/align_format/showalign.cpp -o showalign.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/align_format/tabular.cpp -o tabular.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/align_format/vectorscreen.cpp -o vectorscreen.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_prot_options.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/locus_item.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_loc_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_loc.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/align_format/seqalignfilter.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/align_format/seqalignfilter.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_advprot_options.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/psiblast_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_options.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/keywords_item.cpp: In member function 'virtual void ncbi::objects::CKeywordsItem::x_GatherInfo(ncbi::objects::CBioseqContext&)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/keywords_item.cpp:286:18: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=]
} catch (CException) {
^~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/locus_item.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
t+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_handle.cpp -o blast_options_handle.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_nucl_options.cpp -o blast_nucl_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/disc_nucl_options.cpp -o disc_nucl_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_prot_options.cpp -o blast_prot_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_options.cpp -o psiblast_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_rps_options.cpp -o blast_rps_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_rps_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_rps_options.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/primary_item.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In static member function 'static void ncbi::align_format::CAlignFormatUtil::FillScanModeBlastDbInfo(std::vector<ncbi::align_format::CAlignFormatUtil::SDbInfo>&, bool, int, Int8, std::__cxx11::string&)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::align_format::CAlignFormatUtil::SDbInfo*, std::vector<ncbi::align_format::CAlignFormatUtil::SDbInfo> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blastx_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blastx_options.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/tblastx_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/tblastx_options.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_advprot_options.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/tblastn_options.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/tblastn_options.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_rps_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_rps_options.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/primary_item.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
ILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/defline_item.cpp -o defline_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/feature_item.cpp -o feature_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/genome_item.cpp -o genome_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/ctrl_items.cpp -o ctrl_items.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/keywords_item.cpp -o keywords_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/locus_item.cpp -o locus_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/primary_item.cpp -o primary_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/tblastx_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/tblastx_options.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/primary_item.cpp: In member function 'void ncbi::objects::CPrimaryItem::x_GetStrForPrimary(ncbi::objects::CBioseqContext&)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/primary_item.cpp:213:63: warning: comparison of integer expressions of different signedness: 'ncbi::TSeqPos' {aka 'unsigned int'} and 'ncbi::TSignedSeqPos' {aka 'int'} [-Wsign-compare]
if ( ctx.IsRefSeq() && last_stop > -1 && (this_start > (last_stop + 1)) ) {
~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/primary_item.cpp:214:28: warning: comparison of integer expressions of different signedness: 'ncbi::TSeqPos' {aka 'unsigned int'} and 'int' [-Wsign-compare]
if (this_start < (15 + last_stop) ) {
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/reference_item.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_advprot_options.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/tblastn_options.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/tblastn_options.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_rps_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/rpstblastn_options.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/rpstblastn_options.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_nucl_options.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/phiblast_nucl_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/phiblast_nucl_options.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/taxon1/Taxon1_data_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/taxon1/Taxon1_data.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/taxon1/taxon1__.hpp:1,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/taxon1/taxon1.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/align_format/taxFormat.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blastx_options.cpp -o blastx_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/tblastx_options.cpp -o tblastx_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/tblastn_options.cpp -o tblastn_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/rpstblastn_options.cpp -o rpstblastn_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/phiblast_nucl_options.cpp -o phiblast_nucl_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/phiblast_prot_options.cpp -o phiblast_prot_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/inclIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/phiblast_prot_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/phiblast_prot_options.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/segment_item.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/bioseq_handle.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/align_format/aln_printer.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/taxon1/Taxon1_data_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/taxon1/Taxon1_data.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/taxon1/taxon1__.hpp:1,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/taxon1/taxon1.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/align_format/taxFormat.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_rps_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/rpstblastn_options.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/rpstblastn_options.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/pssm_engine.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_nucl_options.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/phiblast_nucl_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/phiblast_nucl_options.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/reference_item.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/sequence_item.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/phiblast_prot_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/phiblast_prot_options.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/bioseq_handle.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/align_format/aln_printer.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/prelim_stage.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/local_blast.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/local_blast.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/pssm_engine.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/remote_blast.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/source_item.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/sequence_item.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/source_item.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/util/sequence.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqinfosrc_seqvec.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/util/sequence.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqinfosrc_seqvec.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/source_item.cpp: In member function 'void ncbi::objects::CSourceItem::x_SetSource(const ncbi::objects::CBioSource&, const ncbi::CSerialObject&)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/source_item.cpp:325:21: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CBioSource_Base::TGenome' {aka 'int'} and 'unsigned int' [-Wsign-compare]
if ( genome >= s_organelle_prefix_size ) {
~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqinfosrc_seqdb.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/version_item.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/wgs_item.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/reference_item.cpp -o reference_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/segment_item.cpp -o segment_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/sequence_item.cpp -o sequence_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/source_item.cpp -o source_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/version_item.cpp -o version_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/wgs_item.cpp -o wgs_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-bIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/tsa_item.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/general/Int_fuzz_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/general/Int_fuzz.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_seqloc.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_seqinfosrc.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqinfosrc_bioseq.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqinfosrc_bioseq.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ude /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/pssm_engine.cpp -o pssm_engine.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/local_blast.cpp -o local_blast.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/remote_blast.cpp -o remote_blast.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqinfosrc_seqvec.cpp -o seqinfosrc_seqvec.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqinfosrc_seqdb.cpp -o seqinfosrc_seqdb.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqinfosrc_bioseq.cpp -o seqinfosrc_bioseq.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqsrc_multiseq.cpp -o seqsrc_multiseq.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqsrc_multiseq.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqsrc_seqdb.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/qualifiers.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/context.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_seqinfosrc.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqinfosrc_bioseq.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqinfosrc_bioseq.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/general/Int_fuzz_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/general/Int_fuzz.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_seqloc.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqsrc_multiseq.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/qualifiers.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/align_format/seqalignfilter.cpp -o seqalignfilter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/align_format/taxFormat.cpp -o taxFormat.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/align_format/aln_printer.cpp -o aln_printer.o
/bin/rm -f libalign_format.so .libalign_format.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libalign_format.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC format_flags.o align_format_util.o showdefline.o showalign.o tabular.o vectorscreen.o seqalignfilter.o taxFormat.o aln_printer.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lxalnmgr -lncbi_xloader_genbank -lseqdb -lblast_services -lxobjread -lxobjutil -lxobjmgr -lxnetblast -lblastdb -lgene_info -ltaxon1 -lseqset -lseq -lgeneral -lxser -lxcgi -lxhtml -ltables -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libalign_format.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libalign_format.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libalign_format.so
/bin/ln -f .align_format.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.align_format.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format'
cd objtools/align_format/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=align_format_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format/unit_test'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/gather_items.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format/unit_test'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format/unit_test'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format/unit_test'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format/unit_test'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test TMPL=align_format_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/context.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqsrc_seqdb.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/qualifiers.cpp: In member function 'virtual void ncbi::objects::CFlatSeqIdQVal::Format(ncbi::objects::TFlatQuals&, const ncbi::CTempString&, ncbi::objects::CBioseqContext&, ncbi::objects::IFlatQVal::TFlags) const':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/qualifiers.cpp:1050:10: warning: unused variable 'bHtml' [-Wunused-variable]
bool bHtml = ctx.Config().DoHTML();
^~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/showalign_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqsrc_query_factory.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqsrc_query_factory.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/showdefline_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/blast_test_util.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/blast_test_util.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/vectorscreen_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/gather_items.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_types.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/bl2seq.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqsrc_query_factory.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqsrc_query_factory.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/showdefline_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/bioseq_handle.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/seq_vector.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_objmgr_tools.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/vectorscreen_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/embl_gather.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/gather_items.cpp: In member function 'void ncbi::objects::CFlatGatherer::x_IdComments(ncbi::objects::CBioseqContext&, ncbi::objects::CFlatGatherer::EGenomeAnnotComment) const':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/gather_items.cpp:1029:34: warning: unused variable 'format' [-Wunused-variable]
CCommentItem::ECommentFormat format = ctx.Config().DoHTML() ?
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/gather_items.cpp: In member function 'void ncbi::objects::CFlatGatherer::x_CollectBioSources(ncbi::objects::CFlatGatherer::TSourceFeatSet&) const':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/gather_items.cpp:1798:13: warning: unused variable 'scope' [-Wunused-variable]
CScope* scope = &ctx.GetScope();
^~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/embl_gather.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_types.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/bl2seq.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/bioseq_handle.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/seq_vector.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_objmgr_tools.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/repeats_filter_cxx.cpp:39:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/gather_items.cpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/gather_items.cpp:759:13: warning: 'bool ncbi::objects::s_NsAreGaps(const ncbi::objects::CBioseq_Handle&, ncbi::objects::CBioseqContext&)' defined but not used [-Wunused-function]
static bool s_NsAreGaps(const CBioseq_Handle& seq, CBioseqContext& ctx)
^~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_mtlock.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqsrc_seqdb.cpp -o seqsrc_seqdb.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqsrc_query_factory.cpp -o seqsrc_query_factory.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/bl2seq.cpp -o bl2seq.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_objmgr_tools.cpp -o blast_objmgr_tools.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/repeats_filter_cxx.cpp -o repeats_filter_cxx.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_mtlock.cpp -o blast_mtlock.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/repeats_filter_cxx.cpp:39:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_types.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/uniform_search.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/psibl2seq.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psibl2seq.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
last+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/tsa_item.cpp -o tsa_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_seqloc.cpp -o flat_seqloc.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/qualifiers.cpp -o qualifiers.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/context.cpp -o context.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/gather_items.cpp -o gather_items.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/embl_gather.cpp -o embl_gather.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/genbank_gather.cpp -o genbank_gather.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/genbank_gather.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/tabularinof_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_file_generator.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_types.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/uniform_search.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/local_db_adapter.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/local_db_adapter.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/aln_printer_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/item_formatter.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/genbank_gather.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_file_generator.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_types.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/uniform_search.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/local_db_adapter.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/local_db_adapter.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/psiblast.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/tabularinof_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/aln_printer_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/item_formatter.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_impl.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_impl.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_file_generator.cpp: In member function 'void ncbi::objects::CFlatFileGenerator::Generate(const ncbi::objects::CSeq_entry_Handle&, ncbi::objects::CFlatItemOStream&)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_file_generator.cpp:258:10: warning: unused variable 'nearFeatsSuppress' [-Wunused-variable]
bool nearFeatsSuppress = false;
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_file_generator.cpp:261:10: warning: variable 'isNgNtNwNz' set but not used [-Wunused-but-set-variable]
bool isNgNtNwNz = false;
^~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_file_generator.cpp:262:10: warning: variable 'isGED' set but not used [-Wunused-but-set-variable]
bool isGED = false;
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_file_generator.cpp:263:10: warning: variable 'isTPA' set but not used [-Wunused-but-set-variable]
bool isTPA = false;
^~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_iteration.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/psiblast.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/psi_pssm_input.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psi_pssm_input.cpp:38:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psibl2seq.cpp -o psibl2seq.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/local_db_adapter.cpp -o local_db_adapter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast.cpp -o psiblast.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_impl.cpp -o psiblast_impl.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_iteration.cpp -o psiblast_iteration.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psi_pssm_input.cpp -o psi_pssm_input.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/msa_pssm_input.cpp -o msa_pssm_input.o
/usIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/msa_pssm_input.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/msa_pssm_input.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/embl_formatter.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/format_item_ostream.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_aux_priv.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_aux_priv.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_aux_priv.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_aux_priv.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/genbank_formatter.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
GEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_file_generator.cpp -o flat_file_generator.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/item_formatter.cpp -o item_formatter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/embl_formatter.cpp -o embl_formatter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/genbank_formatter.cpp -o genbank_formatter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/format_item_ostream.cpp -o format_item_ostream.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/item_ostream.cpp -o item_ostream.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/ostream_text_ostream.cpp -o ostreammake[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format/unit_test'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/showdefline_unit_test.cpp -o showdefline_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/showalign_unit_test.cpp -o showalign_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/blast_test_util.cpp -o blast_test_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/vectorscreen_unit_test.cpp -o vectorscreen_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/tabularinof_unit_test.cpp -o tabularinof_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/aln_printer_unit_test.cpp -o aln_printer_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/msa_pssm_input.cpp: In member function 'void ncbi::blast::CPsiBlastInputClustalW::x_ExtractAlignmentData()':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/msa_pssm_input.cpp:376:22: warning: comparison of integer expressions of different signedness: 'int' and 'Uint4' {aka 'unsigned int'} [-Wsign-compare]
while (k < m_Msa->dimensions->query_length &&
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/ostream_text_ostream.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/item_ostream.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie showdefline_unit_test.o showalign_unit_test.o blast_test_util.o vectorscreen_unit_test.o tabularinof_unit_test.o aln_printer_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxalnmgr -lxcgi -lxhtml -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -ldl -lm -lpthread -o align_format_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f align_format_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f align_format_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/align_format_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format/unit_test'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format/unit_test'
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_advprot_options.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_advprot_options.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/genbank_formatter.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/origin_item.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/ftable_gather.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/genbank_formatter.cpp: In member function 'virtual void ncbi::objects::CGenbankFormatter::FormatSequence(const ncbi::objects::CSequenceItem&, ncbi::objects::IFlatTextOStream&)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/genbank_formatter.cpp:1963:18: warning: catching polymorphic type 'class ncbi::objects::CSeqVectorException' by value [-Wcatch-value=]
} catch (CSeqVectorException) {
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/genbank_formatter.cpp:2011:26: warning: catching polymorphic type 'class ncbi::objects::CSeqVectorException' by value [-Wcatch-value=]
} catch (CSeqVectorException) {
^~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/ftable_gather.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/ftable_formatter.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/list:64,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_stack.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_aux_priv.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_aux_priv.cpp:34:
/usr/include/c++/8/bits/list.tcc: In member function 'std::__cxx11::list<_Tp, _Alloc>::iterator std::__cxx11::list<_Tp, _Alloc>::insert(std::__cxx11::list<_Tp, _Alloc>::const_iterator, std::__cxx11::list<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/list.tcc:117:5: note: parameter passing for argument of type 'std::__cxx11::list<double>::const_iterator' {aka 'std::_List_const_iterator<double>'} changed in GCC 7.1
list<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_aux_priv.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_aux_priv.cpp:34:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_aux_priv.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_aux_priv.cpp:34:
/usr/include/c++/8/bits/stl_vector.h: In static member function 'static ncbi::CNcbiMatrix<double>* ncbi::blast::CScorematPssmConverter::GetWeightedResidueFrequencies(const ncbi::objects::CPssmWithParameters&)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
_M_fill_insert(end(), __new_size - size(), __x);
^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In static member function 'static ncbi::CNcbiMatrix<double>* ncbi::blast::CScorematPssmConverter::GetFreqRatios(const ncbi::objects::CPssmWithParameters&)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
_M_fill_insert(end(), __new_size - size(), __x);
^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_aux_priv.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_aux_priv.cpp:34:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_aux_priv.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_aux_priv.cpp:34:
/usr/include/c++/8/bits/stl_vector.h: In static member function 'static void ncbi::blast::CScorematPssmConverter::GetSigma(const ncbi::objects::CPssmWithParameters&, std::vector<double>&)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In static member function 'static void ncbi::blast::CScorematPssmConverter::GetInformationContent(const ncbi::objects::CPssmWithParameters&, std::vector<double>&)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In static member function 'static void ncbi::blast::CScorematPssmConverter::GetGaplessColumnWeights(const ncbi::objects::CPssmWithParameters&, std::vector<double>&)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/list:64,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_stack.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_aux_priv.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_aux_priv.cpp:34:
/usr/include/c++/8/bits/list.tcc: In function 'void ncbi::blast::PsiBlastComputePssmScores(ncbi::CRef<ncbi::objects::CPssmWithParameters>, const ncbi::blast::CBlastOptions&)':
/usr/include/c++/8/bits/list.tcc:247:9: note: parameter passing for argument of type 'std::__cxx11::list<double>::const_iterator' {aka 'std::_List_const_iterator<double>'} changed in GCC 7.1
insert(end(), __new_size, __x);
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_aux_priv.cpp:459:46: note: parameter passing for argument of type 'std::__cxx11::list<double>::const_iterator' {aka 'std::_List_const_iterator<double>'} changed in GCC 7.1
freq_ratios.insert(itr, diff, 0.0);
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_advprot_options.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blastp_kmer_options.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blastp_kmer_options.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/version.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/version.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/version.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/ftable_formatter.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
r/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_aux_priv.cpp -o psiblast_aux_priv.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_aux_priv.cpp -o blast_aux_priv.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_advprot_options.cpp -o blast_advprot_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blastp_kmer_options.cpp -o blastp_kmer_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/version.cpp -o version.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/dust_filter.cpp -o dust_filter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-securitIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/gbseq_formatter.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_loc_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_loc.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/dust_filter.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/dust_filter.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/rps_aux.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/search_strategy.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_advprot_options.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blastp_kmer_options.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blastp_kmer_options.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/format/flat_file_config.hpp:34,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_file_config.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/format/flat_file_config.hpp:34,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_file_config.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/gbseq_formatter.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_loc_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_loc.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/dust_filter.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/dust_filter.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/setup_factory.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/rps_aux.cpp:35:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/rps_aux.cpp:35:
/usr/include/c++/8/bits/stl_vector.h: In member function 'ncbi::CRef<ncbi::blast::CBlastRPSAuxInfo> ncbi::blast::CRpsAuxFile::x_ReadFromFile(ncbi::CNcbiIfstream&)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/alignment_item.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/prelim_stage.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/prelim_stage.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/setup_factory.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
_text_ostream.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/origin_item.cpp -o origin_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/ftable_gather.cpp -o ftable_gather.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/ftable_formatter.cpp -o ftable_formatter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/gbseq_formatter.cpp -o gbseq_formatter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_file_config.cpp -o flat_file_config.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/alignment_item.cpp -o alignment_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/traceback_stage.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/traceback_stage.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/gap_item.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
y -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/rps_aux.cpp -o rps_aux.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/search_strategy.cpp -o search_strategy.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/setup_factory.cpp -o setup_factory.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/prelim_stage.cpp -o prelim_stage.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/traceback_stage.cpp -o traceback_stage.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/uniform_search.cpp -o uniform_search.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-bIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/genome_project_item.cpp:33:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_types.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/uniform_search.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/uniform_search.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/Pssm_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/Pssm.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/local_search.cpp:38:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnmap.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/format/cigar_formatter.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/sam_formatter.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/cigar_formatter.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/format/gather_iter.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/gather_iter.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/cigar_formatter.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnmap.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/format/cigar_formatter.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/sam_formatter.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/format/gather_iter.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/gather_iter.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_results.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_results.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_diag_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_diag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqalign/seqalign__.hpp:1,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/remote_search.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/query_data.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/objmgr_query_data.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/objmgr_query_data.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/gap_item.cpp -o gap_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/genome_project_item.cpp -o genome_project_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/sam_formatter.cpp -o sam_formatter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/cigar_formatter.cpp -o cigar_formatter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/gather_iter.cpp -o gather_iter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/html_anchor_item.cpp -o html_anchor_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/inst_info_map.cpp -o inst_info_map.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/format/items/item_base.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/format/items/html_anchor_item.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/html_anchor_item.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/inst_info_map.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/inst_info_map.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/scope.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/format/items/gene_finder.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/gene_finder.cpp:38:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/objmgr_query_data.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/objmgr_query_data.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/format/items/flat_qual_slots.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_qual_slots.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/format/items/flat_qual_slots.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_qual_slots.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/scope.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/format/items/gene_finder.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/gene_finder.cpp:38:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/objmgrfree_query_data.cpp:38:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
last+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/local_search.cpp -o local_search.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_results.cpp -o blast_results.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/remote_search.cpp -o remote_search.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/query_data.cpp -o query_data.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/objmgr_query_data.cpp -o objmgr_query_data.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/objmgrfree_query_data.cpp -o objmgrfree_query_data.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/bioseq_extract_data_priv.cpp -o bioseq_extract_data_priv.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-mIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/bioseq_extract_data_priv.cpp:38:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/objmgrfree_query_data.cpp:38:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/effsearchspace_calc.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/effsearchspace_calc.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/bioseq_extract_data_priv.cpp:38:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_seqinfosrc_aux.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_seqinfosrc_aux.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_dbindex.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/split_query.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/split_query_cxx.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
bi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/gene_finder.cpp -o gene_finder.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_qual_slots.cpp -o flat_qual_slots.o
/bin/rm -f libxformat.so .libxformat.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxformat.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC accession_item.o basecount_item.o comment_item.o contig_item.o date_item.o dbsource_item.o defline_item.o feature_item.o genome_item.o ctrl_items.o keywords_item.o locus_item.o primary_item.o reference_item.o segment_item.o sequence_item.o source_item.o version_item.o wgs_item.o tsa_item.o flat_seqloc.o qualifiers.o context.o gather_items.o embl_gather.o genbank_gather.o flat_file_generator.o item_formatter.o embl_formatter.o genbank_formatter.o format_item_ostream.o item_ostream.o ostream_text_ostream.o origin_item.o ftable_gather.o ftable_formatter.o gbseq_formatter.o flat_file_config.o alignment_item.o gap_item.o genome_project_item.o sam_formatter.o cigar_formatter.o gather_iter.o html_anchor_item.o inst_info_map.o gene_finder.o flat_qual_slots.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lxcleanup -lvalid -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lsubmit -lxalnmgr -lxobjutil -ltaxon3 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxformat.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxformat.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libxformat.so
/bin/ln -f .xformat.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.xformat.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format'
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/effsearchspace_calc.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/split_query_aux_priv.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/split_query.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/split_query_cxx.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/split_query_blk.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/split_query_blk.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/effsearchspace_calc.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/split_query_aux_priv.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
ap=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/effsearchspace_calc.cpp -o effsearchspace_calc.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_seqinfosrc_aux.cpp -o blast_seqinfosrc_aux.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_dbindex.cpp -o blast_dbindex.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/split_query_cxx.cpp -o split_query_cxx.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/split_query_aux_priv.cpp -o split_query_aux_priv.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/split_query_blk.cpp -o split_query_blk.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FIIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/sseqloc.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/winmask_filter.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/winmask_filter.cpp:38:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/effsearchspace_calc.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/split_query_aux_priv.cpp:34:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long int}; _Tp = long long int; _Alloc = std::allocator<long long int>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<long long int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In function 'void ncbi::blast::SplitQuery_SetEffectiveSearchSpace(ncbi::CRef<ncbi::blast::CBlastOptions>, ncbi::CRef<ncbi::blast::IQueryFactory>, ncbi::CRef<ncbi::blast::SInternalData>)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
^~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/sseqloc.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/winmask_filter.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/winmask_filter.cpp:38:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/seqsrc_seqdb.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/subj_ranges_set.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/subj_ranges_set.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/rpsblast_local.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/seedtop.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seedtop.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/seedtop.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seedtop.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/cdd_pssm_input.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/cdd_pssm_input.cpp:38:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/rpsblast_local.cpp:34:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int>}; _Tp = std::pair<std::__cxx11::basic_string<char>, long long int>; _Alloc = std::allocator<std::pair<std::__cxx11::basic_string<char>, long long int> >]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_advprot_options.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/psiblast_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/deltablast_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/deltablast_options.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/rpsblast_local.cpp:34:
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const std::pair<std::__cxx11::basic_string<char>, long long int>&, const std::pair<std::__cxx11::basic_string<char>, long long int>&)>]':
/usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >' changed in GCC 7.1
__unguarded_linear_insert(_RandomAccessIterator __last,
^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const std::pair<std::__cxx11::basic_string<char>, long long int>&, const std::pair<std::__cxx11::basic_string<char>, long long int>&)>]':
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >' changed in GCC 7.1
__insertion_sort(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >' changed in GCC 7.1
In file included from /usr/include/c++/8/bits/stl_algo.h:61,
from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/rpsblast_local.cpp:34:
/usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >; _Distance = int; _Tp = std::pair<std::__cxx11::basic_string<char>, long long int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const std::pair<std::__cxx11::basic_string<char>, long long int>&, const std::pair<std::__cxx11::basic_string<char>, long long int>&)>]':
/usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >' changed in GCC 7.1
__adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
^~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_heap.h: In function 'void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const std::pair<std::__cxx11::basic_string<char>, long long int>&, const std::pair<std::__cxx11::basic_string<char>, long long int>&)>]':
/usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >' changed in GCC 7.1
__make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last,
^~~~~~~~~~~
/usr/include/c++/8/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >' changed in GCC 7.1
In file included from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/rpsblast_local.cpp:34:
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const std::pair<std::__cxx11::basic_string<char>, long long int>&, const std::pair<std::__cxx11::basic_string<char>, long long int>&)>]':
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >' changed in GCC 7.1
__introsort_loop(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >' changed in GCC 7.1
std::__introsort_loop(__cut, __last, __depth_limit, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1672:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >' changed in GCC 7.1
std::__make_heap(__first, __middle, __comp);
~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/rpsblast_local.cpp:34:
/usr/include/c++/8/bits/vector.tcc: In member function 'ncbi::CRef<ncbi::blast::CSearchResultSet> ncbi::blast::CLocalRPSBlast::RunThreadedSearch()':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/rpsblast_local.cpp:34:
/usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >' changed in GCC 7.1
std::__introsort_loop(__first, __last,
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
std::__lg(__last - __first) * 2,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__comp);
~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >' changed in GCC 7.1
std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >' changed in GCC 7.1
std::__insertion_sort(__first, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
LE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/winmask_filter.cpp -o winmask_filter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/subj_ranges_set.cpp -o subj_ranges_set.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/rpsblast_local.cpp -o rpsblast_local.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seedtop.cpp -o seedtop.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/cdd_pssm_input.cpp -o cdd_pssm_input.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/deltablast_options.cpp -o deltablast_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/psiblast.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/deltablast.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_advprot_options.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/psiblast_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/deltablast_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/deltablast_options.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/magicblast_options.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/magicblast_options.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/cdd_pssm_input.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/cdd_pssm_input.cpp:38:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = PSICdMsaCellData; _Alloc = std::allocator<PSICdMsaCellData>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<PSICdMsaCellData>::iterator' {aka '__gnu_cxx::__normal_iterator<PSICdMsaCellData*, std::vector<PSICdMsaCellData> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/cdd_pssm_input.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/cdd_pssm_input.cpp:38:
/usr/include/c++/8/bits/stl_vector.h: In member function 'void ncbi::blast::CCddInputData::CHitSegment::FillData(int, const ncbi::blast::CBlastRPSInfo&)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<PSICdMsaCellData*, std::vector<PSICdMsaCellData> >' changed in GCC 7.1
_M_fill_insert(end(), __new_size - size(), __x);
^~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/general/User_object_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/general/User_object.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/magicblast.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
bi-blast+-2.7.1/c++/src/algo/blast/api/deltablast.cpp -o deltablast.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/magicblast_options.cpp -o magicblast_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/api/magicblast.cpp -o magicblast.o
/bin/rm -f libxblast.so .libxblast.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxblast.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blast_aux.o blast_options_cxx.o blast_options_local_priv.o blast_options_builder.o blast_setup_cxx.o blast_seqalign.o blast_options_handle.o blast_nucl_options.o disc_nucl_options.o blast_prot_options.o psiblast_options.o blast_rps_options.o blastx_options.o tblastx_options.o tblastn_options.o rpstblastn_options.o phiblast_nucl_options.o phiblast_prot_options.o pssm_engine.o local_blast.o remote_blast.o seqinfosrc_seqvec.o seqinfosrc_seqdb.o seqinfosrc_bioseq.o seqsrc_multiseq.o seqsrc_seqdb.o seqsrc_query_factory.o bl2seq.o blast_objmgr_tools.o repeats_filter_cxx.o blast_mtlock.o psibl2seq.o local_db_adapter.o psiblast.o psiblast_impl.o psiblast_iteration.o psi_pssm_input.o msa_pssm_input.o psiblast_aux_priv.o blast_aux_priv.o blast_advprot_options.o blastp_kmer_options.o version.o dust_filter.o rps_aux.o search_strategy.o setup_factory.o prelim_stage.o traceback_stage.o uniform_search.o local_search.o blast_results.o remote_search.o query_data.o objmgr_query_data.o objmgrfree_query_data.o bioseq_extract_data_priv.o effsearchspace_calc.o blast_seqinfosrc_aux.o blast_dbindex.o split_query_cxx.o split_query_aux_priv.o split_query_blk.o winmask_filter.o subj_ranges_set.o rpsblast_local.o seedtop.o cdd_pssm_input.o deltablast_options.o deltablast.o magicblast_options.o magicblast.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lblast -lseqdb -lseqset -lseq -lgeneral -lxser -lxconnect -lsequtil -ltables -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxblast.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxblast.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libxblast.so
/bin/ln -f .xblast.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.xblast.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api'
cd algo/blast/blastinput/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blastinput UNIX_PROJ="" sources= configurables=configurables.null
cd algo/blast/proteinkmer/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=proteinkmer UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer TMPL=proteinkmer -w -j4 --jobserver-auth=7,8 all
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput TMPL=blastinput -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/proteinkmer/blastkmeroptions.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmeroptions.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/proteinkmer/blastkmerresults.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmerresults.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/sequtil/sequtil_convert.hpp:34,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmer.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_scope_src.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_scope_src.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_loc_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_loc.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_input.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_args.cpp:39:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_fasta_input.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/proteinkmer/blastkmerindex.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmerindex.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp:431: warning: ignoring #pragma ivdep [-Wunknown-pragmas]
#pragma ivdep
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_fasta_input.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_loc_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_loc.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_input.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp: In function 'void ncbi::neighbor_query(const std::vector<std::vector<unsigned int> >&, const uint64_t*, std::vector<std::set<unsigned int> >&, ncbi::blast::CMinHashFile&, int, int, double, ncbi::TBlastKmerPrelimScoreVector&, ncbi::BlastKmerStats&, int)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp:791:17: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
if (last_oid == *i)
~~~~~~~~~^~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/proteinkmer/blastkmerresults.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmerresults.cpp:34:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::pair<ncbi::CRef<ncbi::objects::CSeq_id, ncbi::CObjectCounterLocker>, double>&}; _Tp = std::pair<ncbi::CRef<ncbi::objects::CSeq_id>, double>; _Alloc = std::allocator<std::pair<ncbi::CRef<ncbi::objects::CSeq_id>, double> >]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<std::pair<ncbi::CRef<ncbi::objects::CSeq_id>, double> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::pair<ncbi::CRef<ncbi::objects::CSeq_id>, double>*, std::vector<std::pair<ncbi::CRef<ncbi::objects::CSeq_id>, double> > >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/proteinkmer/blastkmerresults.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmerresults.cpp:34:
/usr/include/c++/8/bits/stl_vector.h: In member function 'void ncbi::blast::CBlastKmerResults::x_InitScoreVec(ncbi::TBlastKmerPrelimScoreVector&)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<ncbi::CRef<ncbi::objects::CSeq_id>, double>*, std::vector<std::pair<ncbi::CRef<ncbi::objects::CSeq_id>, double> > >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/sequtil/sequtil_convert.hpp:34,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmer.cpp:34:
/usr/include/c++/8/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::iterator) [with _Tp = std::pair<unsigned int, double>; _Alloc = std::allocator<std::pair<unsigned int, double> >]':
/usr/include/c++/8/bits/vector.tcc:172:5: note: parameter passing for argument of type 'std::vector<std::pair<unsigned int, double> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:172:5: note: parameter passing for argument of type 'std::vector<std::pair<unsigned int, double> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >; _Tp = std::pair<unsigned int, double>; _Alloc = std::allocator<std::pair<unsigned int, double> >]':
/usr/include/c++/8/bits/vector.tcc:672:7: note: parameter passing for argument of type 'std::vector<std::pair<unsigned int, double> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:672:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc:672:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/mhfile.cpp:84: warning: ignoring #pragma ivdep [-Wunknown-pragmas]
#pragma ivdep
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/mhfile.cpp:91: warning: ignoring #pragma ivdep [-Wunknown-pragmas]
#pragma ivdep
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/mhfile.cpp:98: warning: ignoring #pragma ivdep [-Wunknown-pragmas]
#pragma ivdep
In file included from /usr/include/c++/8/map:60,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:45,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp:34:
/usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const int&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, double>; _KeyOfValue = std::_Select1st<std::pair<const int, double> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, double> >'} changed in GCC 7.1
_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp:34:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<unsigned int, double>}; _Tp = std::pair<unsigned int, double>; _Alloc = std::allocator<std::pair<unsigned int, double> >]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<std::pair<unsigned int, double> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmer.cpp -o blastkmer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmerindex.cpp -o blastkmerindex.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmeroptions.cpp -o blastkmeroptions.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmerresults.cpp -o blastkmerresults.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp -o blastkmerutils.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/mhfile.cpp -o mhfile.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -WerroIn file included from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/sequtil/sequtil_convert.hpp:34,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmer.cpp:34:
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__move_median_to_first(_Iterator, _Iterator, _Iterator, _Iterator, _Compare) [with _Iterator = __gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const std::pair<unsigned int, double>&, const std::pair<unsigned int, double>&)>]':
/usr/include/c++/8/bits/stl_algo.h:78:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
__move_median_to_first(_Iterator __result,_Iterator __a, _Iterator __b,
^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:78:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:78:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:78:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const std::pair<unsigned int, double>&, const std::pair<unsigned int, double>&)>]':
/usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
__unguarded_linear_insert(_RandomAccessIterator __last,
^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const std::pair<unsigned int, double>&, const std::pair<unsigned int, double>&)>]':
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
__insertion_sort(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
In file included from /usr/include/c++/8/bits/stl_algo.h:61,
from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/sequtil/sequtil_convert.hpp:34,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmer.cpp:34:
/usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >; _Distance = int; _Tp = std::pair<unsigned int, double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const std::pair<unsigned int, double>&, const std::pair<unsigned int, double>&)>]':
/usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
__adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
^~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/sequtil/sequtil_convert.hpp:34,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmer.cpp:34:
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const std::pair<unsigned int, double>&, const std::pair<unsigned int, double>&)>]':
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
__introsort_loop(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1921:34: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
std::__move_median_to_first(__first, __first + 1, __mid, __last - 1,
~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__comp);
~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1921:34: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
std::__introsort_loop(__cut, __last, __depth_limit, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/cmdline_flags.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/cmdline_flags.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/sequtil/sequtil_convert.hpp:34,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmer.cpp:34:
/usr/include/c++/8/bits/stl_vector.h: In member function 'ncbi::CRef<ncbi::blast::CBlastKmerResultsSet> ncbi::blast::CBlastKmer::x_SearchMultipleQueries(int, int, const ncbi::SBlastKmerParameters&, uint32_t*, uint32_t*, std::vector<std::vector<int> >&, std::vector<int>)':
/usr/include/c++/8/bits/stl_vector.h:1549:4: note: parameter passing for argument of type 'std::vector<std::pair<unsigned int, double> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >'} changed in GCC 7.1
_M_range_insert(__pos, __first, __last,
^~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1549:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
In file included from /usr/include/c++/8/algorithm:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/sequtil/sequtil_convert.hpp:34,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmer.cpp:34:
/usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
std::__introsort_loop(__first, __last,
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
std::__lg(__last - __first) * 2,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__comp);
~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
std::__insertion_sort(__first, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/sequtil/sequtil_convert.hpp:34,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmer.cpp:34:
/usr/include/c++/8/bits/stl_vector.h:1348:71: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
^
/usr/include/c++/8/bits/stl_vector.h:1348:71: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
^
/usr/include/c++/8/bits/stl_vector.h:1348:71: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
^
In file included from /usr/include/c++/8/map:61,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:45,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp:34:
/usr/include/c++/8/bits/stl_map.h: In function 'void ncbi::neighbor_query(const std::vector<std::vector<unsigned int> >&, const uint64_t*, std::vector<std::set<unsigned int> >&, ncbi::blast::CMinHashFile&, int, int, double, ncbi::TBlastKmerPrelimScoreVector&, ncbi::BlastKmerStats&, int)':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp:34:
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
^~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/proteinkmer/mhfile.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/mhfile.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_args.cpp:39:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/pearson.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/pearson.cpp:38:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/sseqloc.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_input_aux.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_input_aux.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_input.cpp -o blast_input.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_fasta_input.cpp -o blast_fasta_input.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_scope_src.cpp -o blast_scope_src.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_args.cpp -o blast_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/cmdline_flags.cpp -o cmdline_flags.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_input_aux.cpp -o blast_input_aux.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/mhfile.cpp: In member function 'void ncbi::blast::CMinHashFile::GetMinHits(int, int&, std::vector<unsigned int>&) const':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/mhfile.cpp:77:18: warning: comparison of integer expressions of different signedness: 'std::vector<unsigned int>::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare]
if (hits.size() < numHashes)
~~~~~~~~~~~~^~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blastp_args.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blastp_args.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'virtual void ncbi::blast::CMappingArgs::ExtractAlgorithmOptions(const ncbi::CArgs&, ncbi::blast::CBlastOptions&)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
^~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/kblastapi.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/sseqloc.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_input_aux.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_input_aux.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blastn_args.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blastn_args.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/rmblastn_args.hpp:21,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/rmblastn_args.cpp:20:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blastx_args.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blastx_args.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/tblastn_args.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/tblastn_args.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/tblastx_args.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/tblastx_args.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
r=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/pearson.cpp -o pearson.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/kblastapi.cpp -o kblastapi.o
/bin/rm -f libproteinkmer.so .libproteinkmer.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libproteinkmer.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blastkmer.o blastkmerindex.o blastkmeroptions.o blastkmerresults.o blastkmerutils.o mhfile.o pearson.o kblastapi.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libproteinkmer.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libproteinkmer.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libproteinkmer.so
/bin/ln -f .proteinkmer.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.proteinkmer.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer'
cd algo/blast/format/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xblastformat UNIX_PROJ="" sources= configurables=configurables.null
cd algo/blast/igblast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=igblast UNIX_PROJ="" sources= configurables=configurables.null
cd algo/blast/proteinkmer/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=proteinkmer_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer/unit_test'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer/unit_test'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer/unit_test'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer/unit_test'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer/unit_test'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/format TMPL=xblastformat -w -j4 --jobserver-auth=7,8 all
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/unit_test TMPL=proteinkmer_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/igblast TMPL=igblast -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/sseqloc.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/format/blast_format.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_format.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastxml_format.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastxml2_format.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/igblast/igblast.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/igblast/igblast.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/version.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/version.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/format/blastfmtutil.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastfmtutil.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/unit_test/proteinkmer_unit_test.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blastp_args.cpp -o blastp_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blastn_args.cpp -o blastn_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/rmblastn_args.cpp -o rmblastn_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blastx_args.cpp -o blastx_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/tblastn_args.cpp -o tblastn_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/tblastx_args.cpp -o tblastx_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -WIn file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastxml2_format.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastxml_format.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/psiblast_args.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/psiblast_args.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/sseqloc.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/format/blast_format.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_format.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastxml_format.cpp: In function 'void ncbi::s_SeqAlignSetToXMLHits(std::__cxx11::list<ncbi::CRef<ncbi::objects::CHit> >&, const ncbi::objects::CSeq_align_set&, ncbi::objects::CScope*, const ncbi::CBlastFormattingMatrix*, const ncbi::TMaskedQueryRegions*, bool, int, int, ncbi::CNcbiOstream*)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastxml_format.cpp:501:86: warning: 'ncbi::CObjectOStreamXml::CObjectOStreamXml(ncbi::CNcbiOstream&, bool)' is deprecated [-Wdeprecated-declarations]
auto_ptr<CObjectOStreamXml> xml_one_hit_os (new CObjectOStreamXml (one_hit_os,false));
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastxml_format.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/objostrxml.hpp:66:26: note: declared here
NCBI_DEPRECATED_CTOR(CObjectOStreamXml(CNcbiOstream& out, bool deleteOut));
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimisc.hpp:1099:38: note: in definition of macro 'NCBI_DEPRECATED_CTOR'
# define NCBI_DEPRECATED_CTOR(decl) decl NCBI_DEPRECATED
^~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastxml_format.cpp: In function 'bool ncbi::s_SerializeAndSplitBy(const ncbi::CSerialObject&, const char*, std::__cxx11::string&, std::__cxx11::string&, bool, bool)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastxml_format.cpp:785:89: warning: 'ncbi::CObjectOStreamXml::CObjectOStreamXml(ncbi::CNcbiOstream&, bool)' is deprecated [-Wdeprecated-declarations]
auto_ptr<CObjectOStreamXml> xml_one_iter_os(new CObjectOStreamXml (one_iter_ss_os,false));
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastxml_format.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/objostrxml.hpp:66:26: note: declared here
NCBI_DEPRECATED_CTOR(CObjectOStreamXml(CNcbiOstream& out, bool deleteOut));
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimisc.hpp:1099:38: note: in definition of macro 'NCBI_DEPRECATED_CTOR'
# define NCBI_DEPRECATED_CTOR(decl) decl NCBI_DEPRECATED
^~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/rpsblast_args.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/rpsblast_args.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_format.cpp:49:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/format/data4xmlformat.hpp: In member function 'virtual std::__cxx11::string ncbi::CCmdLineBlastXMLReportData::GetFilterString() const':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/format/data4xmlformat.hpp:155:39: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations]
m_Options.GetFilterString(); /* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/uniform_search.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/format/blast_format.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_format.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:171:27: note: declared here
NCBI_DEPRECATED char* GetFilterString() const;
^~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_format.cpp:51:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/format/data4xml2format.hpp: In member function 'virtual std::__cxx11::string ncbi::CCmdLineBlastXML2ReportData::GetFilterString() const':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/format/data4xml2format.hpp:140:40: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations]
m_Options->GetFilterString(); /* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/uniform_search.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/format/blast_format.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_format.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:171:27: note: declared here
NCBI_DEPRECATED char* GetFilterString() const;
^~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_format.cpp: In member function 'void ncbi::CBlastFormat::x_SplitSeqAlign(ncbi::CConstRef<ncbi::objects::CSeq_align_set>, ncbi::objects::CSeq_align_set&, ncbi::objects::CSeq_align_set&, ncbi::blast::CPsiBlastIterationState::TSeqIds&)':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_format.cpp:520:18: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
if(count >= m_NumSummary)
~~~~~~^~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/rpstblastn_args.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/rpstblastn_args.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/igblastn_args.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/igblastn_args.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Seq_annot_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Seq_annot.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/format/data4xmlformat.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastfmtutil.cpp -o blastfmtutil.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastxml_format.cpp -o blastxml_format.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastxml2_format.cpp -o blastxml2_format.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_format.cpp -o blast_format.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/format/data4xmlformat.cpp -o data4xmlformat.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/format/data4xml2format.cpp -o data4xml2format.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-mIn file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/unit_test/proteinkmer_unit_test.cpp:37:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::pair<unsigned int, double>&}; _Tp = std::pair<unsigned int, double>; _Alloc = std::allocator<std::pair<unsigned int, double> >]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<std::pair<unsigned int, double> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/igblastp_args.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/igblastp_args.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Seq_annot_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seq/Seq_annot.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/format/data4xml2format.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/format/build_archive.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/unit_test/proteinkmer_unit_test.cpp:37:
/usr/include/c++/8/bits/stl_vector.h: In member function 'void proteinkmers::KmerResults::test_method()':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In member function 'void proteinkmers::KmerResultsSetPushBack::test_method()':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/format/data4xmlformat.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/format/data4xmlformat.hpp: In member function 'virtual std::__cxx11::string ncbi::CCmdLineBlastXMLReportData::GetFilterString() const':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/format/data4xmlformat.hpp:155:39: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations]
m_Options.GetFilterString(); /* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/uniform_search.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/format/data4xmlformat.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/format/data4xmlformat.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:171:27: note: declared here
NCBI_DEPRECATED char* GetFilterString() const;
^~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In member function 'void proteinkmers::KmerResultsSet::test_method()':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/deltablast_args.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/deltablast_args.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/sseqloc.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/format/blast_format.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_format.cpp:37:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_assign_aux(_ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator<const ncbi::align_format::CAlignFormatUtil::SDbInfo*, std::vector<ncbi::align_format::CAlignFormatUtil::SDbInfo> >; _Tp = ncbi::align_format::CAlignFormatUtil::SDbInfo; _Alloc = std::allocator<ncbi::align_format::CAlignFormatUtil::SDbInfo>]':
/usr/include/c++/8/bits/vector.tcc:288:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const ncbi::align_format::CAlignFormatUtil::SDbInfo*, std::vector<ncbi::align_format::CAlignFormatUtil::SDbInfo> >' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:288:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const ncbi::align_format::CAlignFormatUtil::SDbInfo*, std::vector<ncbi::align_format::CAlignFormatUtil::SDbInfo> >' changed in GCC 7.1
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/sseqloc.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/format/blast_format.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_format.cpp:37:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'ncbi::CBlastFormat::CBlastFormat(const ncbi::blast::CBlastOptions&, const std::vector<ncbi::align_format::CAlignFormatUtil::SDbInfo>&, ncbi::blast::CFormattingArgs::EOutputFormat, bool, ncbi::CNcbiOstream&, int, int, ncbi::objects::CScope&, bool, bool, bool, const string&, bool, const string&)':
/usr/include/c++/8/bits/stl_vector.h:1512:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const ncbi::align_format::CAlignFormatUtil::SDbInfo*, std::vector<ncbi::align_format::CAlignFormatUtil::SDbInfo> >' changed in GCC 7.1
{ _M_assign_aux(__first, __last, std::__iterator_category(__first)); }
^~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/igblast/igblast.cpp -o igblast.o
/bin/rm -f libigblast.so .libigblast.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libigblast.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC igblast.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxconnect -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libigblast.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libigblast.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libigblast.so
/bin/ln -f .igblast.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.igblast.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=aalookup_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
date-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/psiblast_args.cpp -o psiblast_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/rpsblast_args.cpp -o rpsblast_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/rpstblastn_args.cpp -o rpstblastn_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/igblastn_args.cpp -o igblastn_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/igblastp_args.cpp -o igblastp_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/deltablast_args.cpp -o deltablast_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blas/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=aalookup_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/format/data4xml2format.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/format/data4xml2format.hpp: In member function 'virtual std::__cxx11::string ncbi::CCmdLineBlastXML2ReportData::GetFilterString() const':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/format/data4xml2format.hpp:140:40: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations]
m_Options->GetFilterString(); /* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/uniform_search.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/format/data4xml2format.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/format/data4xml2format.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:171:27: note: declared here
NCBI_DEPRECATED char* GetFilterString() const;
^~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/magicblast_args.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/magicblast_args.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/aalookup_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/kblastp_args.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/kblastp_args.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/magicblast_args.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/magicblast_args.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/sseqloc.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/format/blast_format.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/format/vecscreen_run.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/aalookup_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Seq_align_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Seq_align.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/format/sam_formatter.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/format/sam.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/format/sam.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/util/sequence.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_asn1_input.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/format/blast_async_format.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_async_format.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/util/sequence.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_asn1_input.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/sseqloc.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/format/blast_format.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/format/vecscreen_run.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer/unit_test'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/unit_test/proteinkmer_unit_test.cpp -o proteinkmer_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie proteinkmer_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o proteinkmer_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f proteinkmer_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f proteinkmer_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/proteinkmer_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer/unit_test'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer/unit_test'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=aascan_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=aascan_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/format/blast_async_format.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_async_format.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/aalookup_unit_test.cpp -o aalookup_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie aalookup_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o aalookup_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f aalookup_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f aalookup_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/aalookup_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastdiag_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=blastdiag_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_async_format.cpp: In member function 'virtual void* CBlastAsyncFormatThread::Main()':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_async_format.cpp:122:28: warning: comparison of integer expressions of different signedness: 'std::map<int, std::vector<SFormatResultValues> >::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare]
if (m_ResultsMap.size() != currNum)
~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
t+-2.7.1/c++/src/algo/blast/blastinput/magicblast_args.cpp -o magicblast_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/kblastp_args.cpp -o kblastp_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_asn1_input.cpp -o blast_asn1_input.o
/bin/rm -f libblastinput.so .libblastinput.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libblastinput.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blast_input.o blast_fasta_input.o blast_scope_src.o blast_args.o cmdline_flags.o blast_input_aux.o blastp_args.o blastn_args.o rmblastn_args.o blastx_args.o tblastn_args.o tblastx_args.o psiblast_args.o rpsblast_args.o rpstblastn_args.o igblastn_args.o igblastp_args.o deltablast_args.o magicblast_args.o kblastp_args.o blast_asn1_input.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lxblast -lalign_format -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lseqdb -lxobjread -lxobjread -lvariation -lcreaders -lsubmit -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lxutil -lncbi_xloader_genbank -lncbi_xreader_id2 -lncbi_xreader -lscoremat -lseqset -lseq -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastinput.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libblastinput.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libblastinput.so
/bin/ln -f .blastinput.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.blastinput.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastengine_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=blastengine_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastdiag_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastdiag_unit_test.cpp -o blastdiag_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastdiag_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o blastdiag_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdiag_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blastdiag_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/blastdiag_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastextend_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
ap=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/format/build_archive.cpp -o build_archive.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/format/vecscreen_run.cpp -o vecscreen_run.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/format/sam.cpp -o sam.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_async_format.cpp -o blast_async_format.o
/bin/rm -f libxblastformat.so .libxblastformat.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxblastformat.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blastfmtutil.o blastxml_format.o blastxml2_format.o blast_format.o data4xmlformat.o data4xml2format.o build_archive.o vecscreen_run.o sam.o blast_async_format.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lxformat -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lalign_format -lblastxml -lblastxml2 -lxhtml -lxcgi -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxblastformat.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxblastformat.so /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib/libxblastformat.so
/bin/ln -f .xblastformat.dep /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/status/.xblastformat.dep
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format'
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastfilter_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=blastextend_unit_test -w -j4 --jobserver-auth=7,8 all
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=blastfilter_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp: In member function 'void blastengine::testBlastpPrelimSearch::test_method()':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp:452:33: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
options->SetFilterString("L"); /* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_nucl_options.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp:53:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastextend_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastfilter_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp -o aascan_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie aascan_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o aascan_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f aascan_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f aascan_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/aascan_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blasthits_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=blasthits_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastextend_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastfilter_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blasthits_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blasthits_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp -o blastengine_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastengine_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o blastengine_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastengine_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blastengine_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/blastengine_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastoptions_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=blastoptions_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastextend_unit_test.cpp -o blastextend_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastextend_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o blastextend_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastextend_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blastextend_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/blastextend_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastsetup_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=blastsetup_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/util_misc.hpp:33,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastsetup_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp: In member function 'void blastoptions::RemoteOptionsTest::test_method()':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:73:60: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
BOOST_CHECK_NO_THROW(opts.SetFilterString("m L", false)); /* NCBI_FAKE_WARNING */
^
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:146:9: note: in definition of macro 'BOOST_CHECK_NO_THROW_IMPL'
S; \
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp: In member function 'void blastoptions::testRemoteFilterString::test_method()':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1329:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
opts.SetFilterString("F", true);/* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1333:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
opts.SetFilterString("T", true);/* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1338:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
opts.SetFilterString("F", true);/* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1340:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
opts.SetFilterString("T", true);/* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1344:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
opts.SetFilterString("F", true);/* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1346:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
opts.SetFilterString("T", true);/* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1350:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
opts.SetFilterString("F", true);/* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1352:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
opts.SetFilterString("T", true);/* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1356:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
opts.SetFilterString("F", true);/* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1358:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
opts.SetFilterString("T", true);/* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
In file included from /usr/include/boost/test/test_tools.hpp:45,
from /usr/include/boost/test/unit_test.hpp:18,
from /usr/include/boost/test/auto_unit_test.hpp:16,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:67,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp: In member function 'void blastoptions::testOptionsDeepCopy::test_method()':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1397:57: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations]
BOOST_CHECK_EQUAL(string(optsClone->GetFilterString()), string("L;m;")); /* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:171:27: note: declared here
NCBI_DEPRECATED char* GetFilterString() const;
^~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/util_misc.hpp:33,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastsetup_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../core /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blasthits_unit_test.cpp -o blasthits_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blasthits_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o blasthits_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blasthits_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blasthits_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/blasthits_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=delta_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=delta_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/delta_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/delta_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp -o blastoptions_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastoptions_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o blastoptions_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastoptions_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blastoptions_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/blastoptions_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=gapinfo_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=gapinfo_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/gapinfo_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/delta_unit_test.cpp -o delta_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie delta_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqalign_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o delta_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f delta_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f delta_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/delta_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=gencode_singleton_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=gencode_singleton_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/gapinfo_unit_test.cpp -o gapinfo_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie gapinfo_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxconnect -lxncbi -ldl -lm -lpthread -o gapinfo_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f gapinfo_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f gapinfo_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/gapinfo_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=hspfilter_besthit_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=hspfilter_besthit_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastfilter_unit_test.cpp -o blastfilter_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastfilter_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o blastfilter_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastfilter_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blastfilter_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/blastfilter_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=hspfilter_culling_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=hspfilter_culling_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/sseqloc.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/gencode_singleton_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/hspfilter_besthit_unit_test.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/hspfilter_culling_unit_test.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastsetup_unit_test.cpp -o blastsetup_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastsetup_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o blastsetup_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastsetup_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blastsetup_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/blastsetup_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=hspstream_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=hspstream_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/hspfilter_besthit_unit_test.cpp -o hspfilter_besthit_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie hspfilter_besthit_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o hspfilter_besthit_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f hspfilter_besthit_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f hspfilter_besthit_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/hspfilter_besthit_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=linkhsp_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=linkhsp_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/hspfilter_culling_unit_test.cpp -o hspfilter_culling_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie hspfilter_culling_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o hspfilter_culling_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f hspfilter_culling_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f hspfilter_culling_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/hspfilter_culling_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=magicblast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=magicblast_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr.hpp:46,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/hspstream_test_util.hpp:41,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/hspstream_test_util.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/gencode_singleton_unit_test.cpp -o gencode_singleton_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie gencode_singleton_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o gencode_singleton_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f gencode_singleton_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f gencode_singleton_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/gencode_singleton_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/hspstream_unit_test.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=msa2pssm_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=msa2pssm_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/linkhsp_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/magicblast_unit_test.cpp:32:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/msa2pssm_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/linkhsp_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/hspstream_unit_test.cpp -o hspstream_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/hspstream_test_util.cpp -o hspstream_test_util.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie hspstream_unit_test.o hspstream_test_util.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o hspstream_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f hspstream_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f hspstream_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/hspstream_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=ntlookup_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=ntlookup_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/msa2pssm_unit_test.cpp -o msa2pssm_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie msa2pssm_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o msa2pssm_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f msa2pssm_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f msa2pssm_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/msa2pssm_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=ntscan_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=ntscan_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/ntlookup_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/ntscan_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/linkhsp_unit_test.cpp -o linkhsp_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie linkhsp_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o linkhsp_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f linkhsp_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f linkhsp_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/linkhsp_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=optionshandle_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=optionshandle_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/magicblast_unit_test.cpp -o magicblast_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie magicblast_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -lm -lpthread -o magicblast_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f magicblast_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f magicblast_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/magicblast_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=phiblast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=phiblast_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/ntlookup_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/optionshandle_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/phiblast_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/ntscan_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/phiblast_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/phiblast_unit_test.cpp -o phiblast_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie phiblast_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o phiblast_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f phiblast_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f phiblast_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/phiblast_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=prelimsearch_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=prelimsearch_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/ntlookup_unit_test.cpp -o ntlookup_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie ntlookup_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o ntlookup_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f ntlookup_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f ntlookup_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/ntlookup_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=psibl2seq_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=psibl2seq_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/prelimsearch_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/psibl2seq_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/prelimsearch_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/psibl2seq_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/ntscan_unit_test.cpp -o ntscan_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie ntscan_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o ntscan_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f ntscan_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f ntscan_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/ntscan_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=psiblast_iteration_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=psiblast_iteration_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/psiblast_iteration_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/optionshandle_unit_test.cpp -o optionshandle_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie optionshandle_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o optionshandle_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f optionshandle_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f optionshandle_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/optionshandle_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=psiblast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=psiblast_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/prelimsearch_unit_test.cpp -o prelimsearch_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie prelimsearch_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o prelimsearch_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f prelimsearch_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f prelimsearch_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/prelimsearch_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=pssmcreate_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=pssmcreate_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/psiblast_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/psibl2seq_unit_test.cpp -o psibl2seq_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie psibl2seq_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o psibl2seq_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f psibl2seq_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f psibl2seq_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/psibl2seq_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=pssmenginefreqratios_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=pssmenginefreqratios_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/psiblast_iteration_unit_test.cpp -o psiblast_iteration_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie psiblast_iteration_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o psiblast_iteration_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f psiblast_iteration_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f psiblast_iteration_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/psiblast_iteration_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=querydata_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=querydata_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssm_test_util.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssmcreate_cdd_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssmcreate_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssmenginefreqratios_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/querydata_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssm_test_util.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/psiblast_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssmcreate_cdd_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssmcreate_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssmenginefreqratios_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/querydata_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssmenginefreqratios_unit_test.cpp:34:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssmenginefreqratios_unit_test.cpp:34:
/usr/include/c++/8/bits/stl_vector.h: In member function 'void PssmEngineFreqRatios::AllZerosFreqRatios::test_method()':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
_M_fill_insert(end(), __new_size - size(), __x);
^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssmcreate_cdd_unit_test.cpp:35:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = PSICdMsaCellData; _Alloc = std::allocator<PSICdMsaCellData>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<PSICdMsaCellData>::iterator' {aka '__gnu_cxx::__normal_iterator<PSICdMsaCellData*, std::vector<PSICdMsaCellData> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssmcreate_cdd_unit_test.cpp:35:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'CPssmInputWithSingleCD::CPssmInputWithSingleCD()':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<PSICdMsaCellData*, std::vector<PSICdMsaCellData> >' changed in GCC 7.1
_M_fill_insert(end(), __new_size - size(), __x);
^~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssmenginefreqratios_unit_test.cpp -o pssmenginefreqratios_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie pssmenginefreqratios_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o pssmenginefreqratios_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f pssmenginefreqratios_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f pssmenginefreqratios_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/pssmenginefreqratios_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=queryinfo_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=queryinfo_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/queryinfo_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/queryinfo_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/querydata_unit_test.cpp -o querydata_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie querydata_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o querydata_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f querydata_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f querydata_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/querydata_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=redoalignment_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/psiblast_unit_test.cpp -o psiblast_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie psiblast_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqalign_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o psiblast_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f psiblast_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f psiblast_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/psiblast_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=remote_blast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=redoalignment_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=remote_blast_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../core /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssmcreate_unit_test.cpp -o pssmcreate_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../core /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssm_test_util.cpp -o pssm_test_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../core /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssmcreate_cdd_unit_test.cpp -o pssmcreate_cdd_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie pssmcreate_unit_test.o pssm_test_util.o pssmcreate_cdd_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o pssmcreate_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f pssmcreate_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f pssmcreate_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/pssmcreate_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=rps_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=rps_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/redoalignment_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/remote_blast_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/rps_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/redoalignment_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/remote_blast_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/rps_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/queryinfo_unit_test.cpp -o queryinfo_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie queryinfo_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o queryinfo_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f queryinfo_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f queryinfo_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/queryinfo_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=scoreblk_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=scoreblk_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/scoreblk_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/scoreblk_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../core /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/redoalignment_unit_test.cpp -o redoalignment_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie redoalignment_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o redoalignment_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f redoalignment_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f redoalignment_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/redoalignment_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=search_strategy_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=search_strategy_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/rps_unit_test.cpp -o rps_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie rps_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o rps_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f rps_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f rps_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/rps_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=seqinfosrc_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=seqinfosrc_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/search_strategy_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqinfosrc_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/scoreblk_unit_test.cpp -o scoreblk_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie scoreblk_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o scoreblk_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f scoreblk_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f scoreblk_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/scoreblk_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=seqsrc_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=seqsrc_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/random_gen.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqsrc_mock.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqsrc_mock.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/mockseqsrc2_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/mockseqsrc1_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqsrc_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/util/random_gen.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqsrc_mock.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqsrc_mock.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqinfosrc_unit_test.cpp -o seqinfosrc_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie seqinfosrc_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o seqinfosrc_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqinfosrc_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f seqinfosrc_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/seqinfosrc_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=setupfactory_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=setupfactory_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqsrc_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/setupfactory_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/remote_blast_unit_test.cpp -o remote_blast_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie remote_blast_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o remote_blast_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f remote_blast_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f remote_blast_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/remote_blast_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=split_query_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=split_query_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/split_query_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/search_strategy_unit_test.cpp -o search_strategy_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie search_strategy_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o search_strategy_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f search_strategy_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f search_strategy_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/search_strategy_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=stat_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=stat_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/split_query_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/stat_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqsrc_unit_test.cpp -o seqsrc_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqsrc_mock.cpp -o seqsrc_mock.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/mockseqsrc1_unit_test.cpp -o mockseqsrc1_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/mockseqsrc2_unit_test.cpp -o mockseqsrc2_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie seqsrc_unit_test.o seqsrc_mock.o mockseqsrc1_unit_test.o mockseqsrc2_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o seqsrc_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqsrc_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f seqsrc_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/seqsrc_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=subj_ranges_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=subj_ranges_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/setupfactory_unit_test.cpp -o setupfactory_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie setupfactory_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o setupfactory_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f setupfactory_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f setupfactory_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/setupfactory_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=traceback_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=traceback_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/stat_unit_test.cpp -o stat_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie stat_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o stat_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f stat_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f stat_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/stat_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=tracebacksearch_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=tracebacksearch_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/seqsrc_seqdb.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/subj_ranges_set.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/subj_ranges_unit_test.cpp:37:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/traceback_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/tracebacksearch_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/traceback_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/tracebacksearch_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/subj_ranges_unit_test.cpp -o subj_ranges_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie subj_ranges_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o subj_ranges_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f subj_ranges_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f subj_ranges_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/subj_ranges_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=uniform_search_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=uniform_search_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/uniform_search_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/split_query_unit_test.cpp -o split_query_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie split_query_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o split_query_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f split_query_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f split_query_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/split_query_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=version_reference_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=version_reference_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/uniform_search_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/tracebacksearch_unit_test.cpp -o tracebacksearch_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie tracebacksearch_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o tracebacksearch_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f tracebacksearch_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f tracebacksearch_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/tracebacksearch_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/blast_format/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blast_format_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blast_format'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blast_format'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blast_format'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blast_format'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blast_format'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format TMPL=blast_format_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/traceback_unit_test.cpp -o traceback_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie traceback_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o traceback_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f traceback_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f traceback_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/traceback_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=bdbloader_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blastdb'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blastdb'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blastdb'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blastdb TMPL=bdbloader_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/version_reference_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_loc_.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_loc.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format/seqalignfilter_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format/build_archive_unit_test.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format/blastfmtutil_unit_test.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format/vecscreen_run_unit_test.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/blastdb/bdbloader.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blastdb/bdbloader_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format/build_archive_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format/blastfmtutil_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format/vecscreen_run_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/blastdb/bdbloader.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blastdb/bdbloader_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/version_reference_unit_test.cpp -o version_reference_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie version_reference_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o version_reference_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f version_reference_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f version_reference_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/version_reference_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blast_formatter LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast TMPL=blast_formatter -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast/blast_formatter.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/uniform_search_unit_test.cpp -o uniform_search_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie uniform_search_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o uniform_search_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f uniform_search_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f uniform_search_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/uniform_search_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastn LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast TMPL=blastn -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast/blastn_app.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format/blast_format_unit_test.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast/blast_formatter.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blastdb'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include -I../ /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blastdb/bdbloader_unit_test.cpp -o bdbloader_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie bdbloader_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o bdbloader_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f bdbloader_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f bdbloader_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/bdbloader_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blastdb'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blastdb'
cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastp LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast TMPL=blastp -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast/blastn_app.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format/blast_format_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast/blastp_app.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast/blastp_app.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast/blastn_app.cpp -o blastn_app.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastn_app.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_app_util -lxformat -lxcleanup -lvalid -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lsubmit -lxregexp -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o blastn
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blastn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/blastn
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastx LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast TMPL=blastx -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast/blastx_app.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast/blast_formatter.cpp -o blast_formatter.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blast_formatter.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o blast_formatter
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_formatter /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blast_formatter /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/blast_formatter
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=deltablast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast TMPL=deltablast -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast/deltablast_app.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blast_format'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format/seqalignfilter_unit_test.cpp -o seqalignfilter_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format/blastfmtutil_unit_test.cpp -o blastfmtutil_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format/build_archive_unit_test.cpp -o build_archive_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format/vecscreen_run_unit_test.cpp -o vecscreen_run_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format/blast_format_unit_test.cpp -o blast_format_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie seqalignfilter_unit_test.o blastfmtutil_unit_test.o build_archive_unit_test.o vecscreen_run_unit_test.o blast_format_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncmake[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast/blastp_app.cpp -o blastp_app.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastp_app.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o blastp
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastp /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blastp /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/blastp
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=psiblast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast TMPL=psiblast -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast/blastx_app.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
bi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -ldl -lm -lpthread -o blast_format_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_format_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blast_format_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/blast_format_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blast_format'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blast_format'
cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=rpsblast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast TMPL=rpsblast -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast/psiblast_app.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast/deltablast_app.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast/rpsblast_app.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast/psiblast_app.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast/rpsblast_app.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast/blastx_app.cpp -o blastx_app.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastx_app.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o blastx
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastx /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blastx /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/blastx
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=rpstblastn LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast TMPL=rpstblastn -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast/rpstblastn_app.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast/rpsblast_app.cpp -o rpsblast_app.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie rpsblast_app.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o rpsblast
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f rpsblast /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f rpsblast /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/rpsblast
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=seedtop LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast TMPL=seedtop -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast/rpstblastn_app.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast/deltablast_app.cpp -o deltablast_app.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie deltablast_app.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o deltablast
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f deltablast /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f deltablast /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/deltablast
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=tblastn LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast TMPL=tblastn -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast/seedtop_app.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast/tblastn_app.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast/psiblast_app.cpp -o psiblast_app.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie psiblast_app.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o psiblast
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f psiblast /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f psiblast /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/psiblast
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=tblastx LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast TMPL=tblastx -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast/tblastx_app.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast/seedtop_app.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast/tblastn_app.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast/tblastx_app.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast/rpstblastn_app.cpp -o rpstblastn_app.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie rpstblastn_app.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o rpstblastn
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f rpstblastn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f rpstblastn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/rpstblastn
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
cd app/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastdb_aliastool LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blastdb TMPL=blastdb_aliastool -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blastdb/blastdb_aliastool.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast/seedtop_app.cpp -o seedtop_app.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie seedtop_app.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o seedtop
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f seedtop /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f seedtop /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/seedtop
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
cd app/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastdbcheck LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blastdb TMPL=blastdbcheck -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast/tblastn_app.cpp -o tblastn_app.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie tblastn_app.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o tblastn
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f tblastn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f tblastn /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/tblastn
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
cd app/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastdbcmd LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blastdb TMPL=blastdbcmd -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blast/tblastx_app.cpp -o tblastx_app.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie tblastx_app.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o tblastx
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f tblastx /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f tblastx /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/tblastx
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
cd app/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastdbcp LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blastdb TMPL=blastdbcp -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /usr/include/c++/8/vector:69,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blastdb/blastdb_aliastool.cpp:35:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long int&}; _Tp = long long int; _Alloc = std::allocator<long long int>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<long long int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blastdb/blastdbcheck.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blastdb/blastdb_aliastool.cpp:35:
/usr/include/c++/8/bits/stl_vector.h: In member function 'int CBlastDBAliasApp::ConvertGiFile(ncbi::CNcbiIstream&, ncbi::CNcbiOstream&, const string*, const string*) const':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blastdb/blastdbcmd.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blastdb/blastdbcp.cpp:31:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blastdb/blastdbcmd.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blastdb/blastdb_aliastool.cpp -o blastdb_aliastool.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastdb_aliastool.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lwritedb -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o blastdb_aliastool
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdb_aliastool /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blastdb_aliastool /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/blastdb_aliastool
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
cd app/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=convert2blastmask LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blastdb TMPL=convert2blastmask -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blastdb/convert2blastmask.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blastdb/convert2blastmask.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blastdb/blastdbcp.cpp -o blastdbcp.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastdbcp.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lwritedb -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lxser -lxcgi -lxhtml -lxconnect -lxutil -lxncbi -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o blastdbcp
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdbcp /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blastdbcp /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/blastdbcp
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
cd app/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=makeblastdb LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blastdb TMPL=makeblastdb -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/build_db.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blastdb/masked_range_set.hpp:33,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blastdb/masked_range_set.cpp:31:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/version.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/version.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blastdb/makeblastdb.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blastdb/convert2blastmask.cpp -o convert2blastmask.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie convert2blastmask.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o convert2blastmask
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f convert2blastmask /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f convert2blastmask /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/convert2blastmask
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
cd app/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=makeprofiledb LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blastdb TMPL=makeprofiledb -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blastdb/blastdbcheck.cpp -o blastdbcheck.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastdbcheck.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o blastdbcheck
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdbcheck /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blastdbcheck /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/blastdbcheck
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
cd app/segmasker/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=segmasker LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/segmasker'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/segmasker'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/segmasker'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/segmasker'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/segmasker'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/segmasker TMPL=segmasker -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/version.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/algo/blast/api/version.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blastdb/makeblastdb.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blastdb/blastdbcmd.cpp -o blastdbcmd.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastdbcmd.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o blastdbcmd
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdbcmd /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blastdbcmd /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/blastdbcmd
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
cd algo/blast/blastinput/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastinput_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput/unit_test'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput/unit_test'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput/unit_test'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput/unit_test'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput/unit_test'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/unit_test TMPL=blastinput_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blastdb/makeprofiledb.cpp:36:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/segmasker/segmasker.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/unit_test/blast_scope_src_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blastdb/makeblastdb.cpp: In member function 'void CMakeBlastDBApp::x_BuildDatabase()':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blastdb/makeblastdb.cpp:1126:15: warning: comparison of integer expressions of different signedness: 'Uint8' {aka 'long long unsigned int'} and 'long int' [-Wsign-compare]
if (bytes >= (1L << 31)) {
~~~~~~^~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/segmasker/segmasker.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp:34:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/unit_test/blast_scope_src_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/segmasker'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/segmasker/segmasker.cpp -o segmasker.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie segmasker.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lxobjsimple -lxalgosegmask -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -ldl -lm -lpthread -o segmasker
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f segmasker /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f segmasker /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/segmasker
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/segmasker'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/segmasker'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=bl2seq_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=bl2seq_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/bl2seq_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blastdb/makeprofiledb.cpp -o makeprofiledb.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie makeprofiledb.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lwritedb -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o makeprofiledb
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f makeprofiledb /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f makeprofiledb /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/makeprofiledb
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=blast_unit_test -w -j4 --jobserver-auth=7,8 all
make[5]: warning: -j4 forced in submake: resetting jobserver mode.
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/bl2seq_unit_test.cpp:35:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blastdb/makeblastdb.cpp -o makeblastdb.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/app/blastdb/masked_range_set.cpp -o masked_range_set.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie makeblastdb.o masked_range_set.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lwritedb -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o makeblastdb
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f makeblastdb /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f makeblastdb /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/makeblastdb
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
In file included from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_unit_test.cpp:39:
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison of integer expressions of different signedness: 'int' and 'wchar_t' [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_unit_test.cpp -o blast_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blast_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o blast_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blast_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/blast_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/bl2seq_unit_test.cpp -o bl2seq_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie bl2seq_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o bl2seq_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f bl2seq_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f bl2seq_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/bl2seq_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput/unit_test'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp -o blastinput_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/unit_test/blast_scope_src_unit_test.cpp -o blast_scope_src_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastinput_unit_test.o blast_scope_src_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lentrez2cli -lentrez2 -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o blastinput_unit_test
/bin/bash /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastinput_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blastinput_unit_test /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/bin/blastinput_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput/unit_test'
make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput/unit_test'
make[3]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build'
make[2]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build'
make[1]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1'
debian/rules override_dh_auto_test
make[1]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1'
dh_auto_test
cd c\+\+ && /usr/bin/make -j1 check VERBOSE=1
make[2]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++'
if test -s ""; then \
cd /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build && /usr/bin/make -w -j1 check_p RUN_CHECK=Y; \
else \
cd /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build && /usr/bin/make -w -j1 check_r RUN_CHECK=Y; \
fi
make[3]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build'
======================================================================
make[4]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build'
/usr/bin/make -C corelib -w -j1 check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
/bin/echo 'Warning: non-existent sub-project "test"'
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make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
/usr/bin/make -C util -w -j1 check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util'
/usr/bin/make -C regexp -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/regexp'
NOTE: Skipping project regexp due to unmet requirements:
LocalPCRE
make[7]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/regexp'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/regexp TMPL=regexp -w -j1 mark-as-disabled
make[8]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/regexp'
make[8]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/regexp'
make[7]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/regexp'
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/usr/bin/make -C xregexp -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
/usr/bin/make -C compress -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress'
/usr/bin/make -C bzip2 -w -j1 check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/bzip2'
NOTE: Skipping project bzip2 due to unmet requirements:
LocalBZ2
make[8]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/bzip2'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/compress/bzip2 TMPL=bzip2 -w -j1 mark-as-disabled
make[9]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/bzip2'
make[9]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/bzip2'
make[8]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/bzip2'
make[7]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/bzip2'
/usr/bin/make -C zlib -w -j1 check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/zlib'
NOTE: Skipping project zlib due to unmet requirements:
LocalZ
make[8]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/zlib'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/util/compress/zlib TMPL=zlib -w -j1 mark-as-disabled
make[9]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/zlib'
make[9]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/zlib'
make[8]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/zlib'
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/usr/bin/make -C api -w -j1 check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api'
make[7]: Nothing to be done for 'check_add_r'.
make[7]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api'
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress'
/bin/echo 'Warning: non-existent sub-project "diff"'
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/usr/bin/make -C tables -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables'
/usr/bin/make -C creaders -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders'
/usr/bin/make -C sequtil -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil'
/usr/bin/make -C bitset -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/bitset'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
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Warning: non-existent sub-project "demo"
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util/bitset'
/bin/echo 'Warning: non-existent sub-project "qparse"'
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/bin/echo 'Warning: non-existent sub-project "lmdb"'
Warning: non-existent sub-project "lmdb"
/bin/echo 'Warning: non-existent sub-project "lmdbxx"'
Warning: non-existent sub-project "lmdbxx"
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
/bin/echo 'Warning: non-existent sub-project "demo"'
Warning: non-existent sub-project "demo"
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/util'
/usr/bin/make -C connect -w -j1 check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
/usr/bin/make -C services -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/connect/services'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/connect/services'
/bin/echo 'Warning: non-existent sub-project "ext"'
Warning: non-existent sub-project "ext"
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
/bin/echo 'Warning: non-existent sub-project "daemons"'
Warning: non-existent sub-project "daemons"
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
/usr/bin/make -C cgi -w -j1 check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/cgi'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/cgi'
/usr/bin/make -C html -w -j1 check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/html'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
/bin/echo 'Warning: non-existent sub-project "demo"'
Warning: non-existent sub-project "demo"
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/html'
/usr/bin/make -C build-system -w -j1 check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/build-system'
/usr/bin/make -C helpers -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/helpers'
SKIP -- build-system/helpers/run_with_lock
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/helpers'
/usr/bin/make -C project_tree_builder -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/project_tree_builder'
SKIP -- build-system/project_tree_builder/project_tree_builder
/usr/bin/make -C msbuild -w -j1 check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/project_tree_builder/msbuild'
NOTE: Skipping project msbuild due to unmet requirements:
MSWin
make[8]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/project_tree_builder/msbuild'
/usr/bin/make -f /build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msbuild TMPL=msbuild_dataobj -w -j1 mark-as-disabled
make[9]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/project_tree_builder/msbuild'
make[9]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/project_tree_builder/msbuild'
make[8]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/project_tree_builder/msbuild'
make[7]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/project_tree_builder/msbuild'
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/project_tree_builder'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/build-system'
/usr/bin/make -C serial -w -j1 check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/serial'
/usr/bin/make -C datatool -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/serial/datatool'
TEST -- serial/datatool/datatool
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/serial/datatool'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
/bin/echo 'Warning: non-existent sub-project "soap"'
Warning: non-existent sub-project "soap"
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/serial'
/usr/bin/make -C db -w -j1 check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/db'
/usr/bin/make -C sqlite -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/db/sqlite'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/db/sqlite'
/bin/echo 'Warning: non-existent sub-project "bdb"'
Warning: non-existent sub-project "bdb"
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/db'
/bin/echo 'Warning: non-existent sub-project "dbapi"'
Warning: non-existent sub-project "dbapi"
/usr/bin/make -C objects -w -j1 check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects'
/usr/bin/make -C general -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
/bin/echo 'Warning: non-existent sub-project "unit_test"'
Warning: non-existent sub-project "unit_test"
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general'
/usr/bin/make -C biblio -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio'
/usr/bin/make -C medline -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline'
/usr/bin/make -C pub -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub'
/usr/bin/make -C seqcode -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode'
/usr/bin/make -C seq -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
/bin/echo 'Warning: non-existent sub-project "unit_test"'
Warning: non-existent sub-project "unit_test"
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
/usr/bin/make -C seqset -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset'
/usr/bin/make -C submit -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit'
/usr/bin/make -C seqedit -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit'
/usr/bin/make -C seqsplit -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit'
/usr/bin/make -C id1 -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1'
/usr/bin/make -C id2 -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2'
/usr/bin/make -C entrez2 -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
/bin/echo 'Warning: non-existent sub-project "demo"'
Warning: non-existent sub-project "demo"
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
/usr/bin/make -C pubmed -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed'
/usr/bin/make -C medlars -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars'
/usr/bin/make -C mla -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
/usr/bin/make -C proj -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/proj'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/proj'
/usr/bin/make -C scoremat -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat'
/usr/bin/make -C blast -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
/usr/bin/make -C blastdb -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb'
/usr/bin/make -C blastxml -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml'
/usr/bin/make -C blastxml2 -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2'
/usr/bin/make -C mmdb -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mmdb'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mmdb'
/usr/bin/make -C cn3d -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/cn3d'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/cn3d'
/usr/bin/make -C cdd -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/cdd'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/cdd'
/usr/bin/make -C ncbimime -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/ncbimime'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/ncbimime'
/usr/bin/make -C pcsubstance -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pcsubstance'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pcsubstance'
/usr/bin/make -C pcassay -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pcassay'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pcassay'
/usr/bin/make -C gbseq -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq'
/usr/bin/make -C insdseq -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/insdseq'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/insdseq'
/usr/bin/make -C tinyseq -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/tinyseq'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/tinyseq'
/usr/bin/make -C biotree -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biotree'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biotree'
/usr/bin/make -C entrezgene -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrezgene'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrezgene'
/usr/bin/make -C omssa -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/omssa'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/omssa'
/usr/bin/make -C remap -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/remap'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/remap'
/usr/bin/make -C seqtest -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqtest'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqtest'
/usr/bin/make -C taxon1 -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1'
/usr/bin/make -C taxon3 -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3'
/usr/bin/make -C gbproj -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbproj'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbproj'
/usr/bin/make -C trackmgr -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/trackmgr'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/trackmgr'
/usr/bin/make -C valerr -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valerr'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valerr'
/usr/bin/make -C valid -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid'
/usr/bin/make -C access -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/access'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/access'
/usr/bin/make -C docsum -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/docsum'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/docsum'
/usr/bin/make -C featdef -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/featdef'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/featdef'
/usr/bin/make -C genomecoll -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll'
/usr/bin/make -C gc_cli -w -j1 check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll/gc_cli'
TEST -- objects/genomecoll/gc_cli/gc_cli
make[7]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll/gc_cli'
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll'
/usr/bin/make -C homologene -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/homologene'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/homologene'
/usr/bin/make -C mim -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mim'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mim'
/usr/bin/make -C objprt -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/objprt'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/objprt'
/usr/bin/make -C variation -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation'
/usr/bin/make -C macro -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/macro'
/bin/echo 'Warning: non-existent sub-project "unit_test"'
Warning: non-existent sub-project "unit_test"
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/macro'
/usr/bin/make -C genesbyloc -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genesbyloc'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genesbyloc'
/usr/bin/make -C coords -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/coords'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/coords'
/usr/bin/make -C varrep -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/varrep'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects/varrep'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objects'
/usr/bin/make -C objmgr -w -j1 check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
/usr/bin/make -C util -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util'
/bin/echo 'Warning: non-existent sub-project "unit_test"'
Warning: non-existent sub-project "unit_test"
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util'
/usr/bin/make -C split -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split'
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr'
/usr/bin/make -C objtools -w -j1 check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools'
/bin/echo 'Warning: non-existent sub-project "unit_test_util"'
Warning: non-existent sub-project "unit_test_util"
/usr/bin/make -C readers -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers'
/bin/echo 'Warning: non-existent sub-project "app"'
Warning: non-existent sub-project "app"
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
/bin/echo 'Warning: non-existent sub-project "unit_test"'
Warning: non-existent sub-project "unit_test"
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers'
/usr/bin/make -C blast -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast'
/usr/bin/make -C seqdb_reader -w -j1 check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader'
/usr/bin/make -C demo -w -j1 check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/demo'
SKIP -- objtools/blast/seqdb_reader/demo/seqdb_demo
make[8]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/demo'
/usr/bin/make -C test -w -j1 check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/test'
TEST -- objtools/blast/seqdb_reader/test/seqdb_perf
make[8]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/test'
make[7]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader'
/usr/bin/make -C seqdb_writer -w -j1 check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer'
/usr/bin/make -C unit_test -w -j1 check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test'
TEST -- objtools/blast/seqdb_writer/unit_test/writedb_unit_test
make[8]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test'
make[7]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer'
/usr/bin/make -C gene_info_reader -w -j1 check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader'
/usr/bin/make -C demo -w -j1 check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/demo'
SKIP -- objtools/blast/gene_info_reader/demo/gene_info_reader
make[8]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/demo'
/usr/bin/make -C unit_test -w -j1 check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test'
TEST -- objtools/blast/gene_info_reader/unit_test/gene_info_unit_test
make[8]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test'
make[7]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader'
/bin/echo 'Warning: non-existent sub-project "gene_info_writer"'
Warning: non-existent sub-project "gene_info_writer"
/usr/bin/make -C services -w -j1 check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services'
/usr/bin/make -C unit_test -w -j1 check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services/unit_test'
SKIP -- objtools/blast/services/unit_test/blast_services_unit_test
make[8]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services/unit_test'
make[7]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services'
/usr/bin/make -C blastdb_format -w -j1 check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format'
/usr/bin/make -C unit_test -w -j1 check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format/unit_test'
TEST -- objtools/blast/blastdb_format/unit_test/blastdb_format_unit_test
make[8]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format/unit_test'
make[7]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format'
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast'
/bin/echo 'Warning: non-existent sub-project "lds2"'
Warning: non-existent sub-project "lds2"
/usr/bin/make -C data_loaders -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders'
/usr/bin/make -C genbank -w -j1 check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
/usr/bin/make -C cache -w -j1 check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache'
make[8]: Nothing to be done for 'check_add_r'.
make[8]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache'
/bin/echo 'Warning: non-existent sub-project "pubseq"'
Warning: non-existent sub-project "pubseq"
/usr/bin/make -C id2 -w -j1 check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2'
make[8]: Nothing to be done for 'check_add_r'.
make[8]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2'
/usr/bin/make -C id1 -w -j1 check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1'
make[8]: Nothing to be done for 'check_add_r'.
make[8]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1'
/bin/echo 'Warning: non-existent sub-project "pubseq2"'
Warning: non-existent sub-project "pubseq2"
/usr/bin/make -C gicache -w -j1 check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/gicache'
make[8]: Nothing to be done for 'check_add_r'.
make[8]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/gicache'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
make[7]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
/bin/echo 'Warning: non-existent sub-project "lds2"'
Warning: non-existent sub-project "lds2"
/usr/bin/make -C blastdb -w -j1 check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
/bin/echo 'Warning: non-existent sub-project "unit_test"'
Warning: non-existent sub-project "unit_test"
make[7]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
/bin/echo 'Warning: non-existent sub-project "patcher"'
Warning: non-existent sub-project "patcher"
/bin/echo 'Warning: non-existent sub-project "asn_cache"'
Warning: non-existent sub-project "asn_cache"
/bin/echo 'Warning: non-existent sub-project "cdd"'
Warning: non-existent sub-project "cdd"
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders'
/usr/bin/make -C simple -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple'
/usr/bin/make -C alnmgr -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr'
/bin/echo 'Warning: non-existent sub-project "demo"'
Warning: non-existent sub-project "demo"
/bin/echo 'Warning: non-existent sub-project "unit_test"'
Warning: non-existent sub-project "unit_test"
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr'
/bin/echo 'Warning: non-existent sub-project "cddalignview"'
Warning: non-existent sub-project "cddalignview"
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
/bin/echo 'Warning: non-existent sub-project "manip"'
Warning: non-existent sub-project "manip"
/usr/bin/make -C cleanup -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup'
/usr/bin/make -C format -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format'
/usr/bin/make -C edit -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/edit'
/bin/echo 'Warning: non-existent sub-project "protein_match"'
Warning: non-existent sub-project "protein_match"
/bin/echo 'Warning: non-existent sub-project "demo"'
Warning: non-existent sub-project "demo"
/bin/echo 'Warning: non-existent sub-project "unit_test"'
Warning: non-existent sub-project "unit_test"
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/edit'
/bin/echo 'Warning: non-existent sub-project "validator"'
Warning: non-existent sub-project "validator"
/bin/echo 'Warning: non-existent sub-project "asniotest"'
Warning: non-existent sub-project "asniotest"
/bin/echo 'Warning: non-existent sub-project "align"'
Warning: non-existent sub-project "align"
/usr/bin/make -C seqmasks_io -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io'
/bin/echo 'Warning: non-existent sub-project "unit_test"'
Warning: non-existent sub-project "unit_test"
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io'
/bin/echo 'Warning: non-existent sub-project "eutils"'
Warning: non-existent sub-project "eutils"
/usr/bin/make -C align_format -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format'
/usr/bin/make -C unit_test -w -j1 check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format/unit_test'
TEST -- objtools/align_format/unit_test/align_format_unit_test
make[7]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format/unit_test'
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format'
/bin/echo 'Warning: non-existent sub-project "snputil"'
Warning: non-existent sub-project "snputil"
/bin/echo 'Warning: non-existent sub-project "uudutil"'
Warning: non-existent sub-project "uudutil"
/bin/echo 'Warning: non-existent sub-project "variation"'
Warning: non-existent sub-project "variation"
/bin/echo 'Warning: non-existent sub-project "writers"'
Warning: non-existent sub-project "writers"
make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/objtools'
/bin/echo 'Warning: non-existent sub-project "ctools"'
Warning: non-existent sub-project "ctools"
/bin/echo 'Warning: non-existent sub-project "sra"'
Warning: non-existent sub-project "sra"
/usr/bin/make -C algo -w -j1 check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo'
/usr/bin/make -C dustmask -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask'
/usr/bin/make -C winmask -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask'
/bin/echo 'Warning: non-existent sub-project "sequence"'
Warning: non-existent sub-project "sequence"
/usr/bin/make -C blast -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast'
/usr/bin/make -C composition_adjustment -w -j1 check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment'
make[7]: Nothing to be done for 'check_add_r'.
make[7]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment'
/usr/bin/make -C core -w -j1 check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core'
make[7]: Nothing to be done for 'check_add_r'.
make[7]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core'
/usr/bin/make -C dbindex -w -j1 check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex'
/usr/bin/make -C makeindex -w -j1 check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex/makeindex'
SKIP -- algo/blast/dbindex/makeindex/makeindex
make[8]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex/makeindex'
make[7]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex'
/bin/echo 'Warning: non-existent sub-project "dbindex_search"'
Warning: non-existent sub-project "dbindex_search"
/usr/bin/make -C api -w -j1 check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api'
make[7]: Nothing to be done for 'check_add_r'.
make[7]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api'
/usr/bin/make -C proteinkmer -w -j1 check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer'
/usr/bin/make -C unit_test -w -j1 check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer/unit_test'
TEST -- algo/blast/proteinkmer/unit_test/proteinkmer_unit_test
make[8]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer/unit_test'
make[7]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer'
/usr/bin/make -C format -w -j1 check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format'
make[7]: Nothing to be done for 'check_add_r'.
make[7]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format'
/usr/bin/make -C blastinput -w -j1 check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput'
/usr/bin/make -C unit_test -w -j1 check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput/unit_test'
TEST -- algo/blast/blastinput/unit_test/blastinput_unit_test
make[8]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput/unit_test'
/bin/echo 'Warning: non-existent sub-project "demo"'
Warning: non-existent sub-project "demo"
make[7]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput'
/bin/echo 'Warning: non-existent sub-project "blast_sra_input"'
Warning: non-existent sub-project "blast_sra_input"
/usr/bin/make -C igblast -w -j1 check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast'
make[7]: Nothing to be done for 'check_add_r'.
make[7]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast'
/bin/echo 'Warning: non-existent sub-project "gumbel_params"'
Warning: non-existent sub-project "gumbel_params"
/usr/bin/make -C unit_tests -w -j1 check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests'
/usr/bin/make -C blast_format -w -j1 check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blast_format'
TEST -- algo/blast/unit_tests/blast_format/blast_format_unit_test
make[8]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blast_format'
/usr/bin/make -C blastdb -w -j1 check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blastdb'
TEST -- algo/blast/unit_tests/blastdb/bdbloader_unit_test
make[8]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blastdb'
/usr/bin/make -C seqdb_reader -w -j1 check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader'
TEST -- algo/blast/unit_tests/seqdb_reader/seqdb_unit_test
make[8]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader'
/usr/bin/make -C api -w -j1 check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
TEST -- algo/blast/unit_tests/api/blast_unit_test
TEST -- algo/blast/unit_tests/api/aalookup_unit_test
TEST -- algo/blast/unit_tests/api/seqsrc_unit_test
TEST -- algo/blast/unit_tests/api/delta_unit_test
TEST -- algo/blast/unit_tests/api/ntlookup_unit_test
TEST -- algo/blast/unit_tests/api/seqinfosrc_unit_test
TEST -- algo/blast/unit_tests/api/setupfactory_unit_test
TEST -- algo/blast/unit_tests/api/search_strategy_unit_test
TEST -- algo/blast/unit_tests/api/redoalignment_unit_test
TEST -- algo/blast/unit_tests/api/queryinfo_unit_test
TEST -- algo/blast/unit_tests/api/querydata_unit_test
TEST -- algo/blast/unit_tests/api/pssmenginefreqratios_unit_test
TEST -- algo/blast/unit_tests/api/blastsetup_unit_test
TEST -- algo/blast/unit_tests/api/blastextend_unit_test
TEST -- algo/blast/unit_tests/api/blastdiag_unit_test
TEST -- algo/blast/unit_tests/api/pssmcreate_unit_test
TEST -- algo/blast/unit_tests/api/psiblast_iteration_unit_test
TEST -- algo/blast/unit_tests/api/hspfilter_besthit_unit_test
TEST -- algo/blast/unit_tests/api/hspfilter_culling_unit_test
TEST -- algo/blast/unit_tests/api/optionshandle_unit_test
TEST -- algo/blast/unit_tests/api/msa2pssm_unit_test
TEST -- algo/blast/unit_tests/api/tracebacksearch_unit_test
TEST -- algo/blast/unit_tests/api/traceback_unit_test
TEST -- algo/blast/unit_tests/api/psibl2seq_unit_test
TEST -- algo/blast/unit_tests/api/psiblast_unit_test
TEST -- algo/blast/unit_tests/api/prelimsearch_unit_test
TEST -- algo/blast/unit_tests/api/phiblast_unit_test
TEST -- algo/blast/unit_tests/api/split_query_unit_test
TEST -- algo/blast/unit_tests/api/scoreblk_unit_test
TEST -- algo/blast/unit_tests/api/hspstream_unit_test
TEST -- algo/blast/unit_tests/api/rps_unit_test
TEST -- algo/blast/unit_tests/api/gapinfo_unit_test
TEST -- algo/blast/unit_tests/api/blasthits_unit_test
TEST -- algo/blast/unit_tests/api/linkhsp_unit_test
TEST -- algo/blast/unit_tests/api/blastengine_unit_test
TEST -- algo/blast/unit_tests/api/subj_ranges_unit_test
TEST -- algo/blast/unit_tests/api/version_reference_unit_test
TEST -- algo/blast/unit_tests/api/ntscan_unit_test
TEST -- algo/blast/unit_tests/api/aascan_unit_test
TEST -- algo/blast/unit_tests/api/remote_blast_unit_test
TEST -- algo/blast/unit_tests/api/uniform_search_unit_test
TEST -- algo/blast/unit_tests/api/blastfilter_unit_test
TEST -- algo/blast/unit_tests/api/blastoptions_unit_test
TEST -- algo/blast/unit_tests/api/gencode_singleton_unit_test
TEST -- algo/blast/unit_tests/api/bl2seq_unit_test
TEST -- algo/blast/unit_tests/api/stat_unit_test
TEST -- algo/blast/unit_tests/api/magicblast_unit_test
make[8]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[7]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests'
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast'
/usr/bin/make -C segmask -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask'
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make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/algo'
/usr/bin/make -C misc -w -j1 check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/misc'
/usr/bin/make -C third_party -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/misc/third_party'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/misc/third_party'
/usr/bin/make -C third_party_static -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/misc/third_party_static'
NOTE: Skipping project third_party_static due to unmet requirements:
-DLL
make[7]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/misc/third_party_static'
make[7]: Nothing to be done for 'mark-as-disabled_r'.
make[7]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/misc/third_party_static'
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/misc/third_party_static'
/bin/echo 'Warning: non-existent sub-project "clog"'
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/bin/echo 'Warning: non-existent sub-project "data_loaders_util"'
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/bin/echo 'Warning: non-existent sub-project "lapackwrapp"'
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/bin/echo 'Warning: non-existent sub-project "cgi_redirect"'
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make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/misc'
/bin/echo 'Warning: non-existent sub-project "gui"'
Warning: non-existent sub-project "gui"
/usr/bin/make -C app -w -j1 check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app'
/bin/echo 'Warning: non-existent sub-project "asn2asn"'
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Warning: non-existent sub-project "id1_fetch"
/usr/bin/make -C blast -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
SKIP -- app/blast/blastp
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make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
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/usr/bin/make -C winmasker -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
SKIP -- app/winmasker/winmasker
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
/usr/bin/make -C dustmasker -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/dustmasker'
SKIP -- app/dustmasker/dustmasker
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/dustmasker'
/usr/bin/make -C segmasker -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/segmasker'
SKIP -- app/segmasker/segmasker
make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/segmasker'
/usr/bin/make -C blastdb -w -j1 check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
SKIP -- app/blastdb/blastdbcmd
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make[6]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
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/bin/echo 'Warning: non-existent sub-project "idmapper"'
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/bin/echo 'Warning: non-existent sub-project "multireader"'
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/bin/echo 'Warning: non-existent sub-project "read_blast_result"'
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/bin/echo 'Warning: non-existent sub-project "hfilter"'
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/bin/echo 'Warning: non-existent sub-project "annotwriter"'
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/bin/echo 'Warning: non-existent sub-project "compart"'
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/bin/echo 'Warning: non-existent sub-project "streamtest"'
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/bin/echo 'Warning: non-existent sub-project "lds2_indexer"'
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/bin/echo 'Warning: non-existent sub-project "discrepancy_report"'
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/bin/echo 'Warning: non-existent sub-project "biosample_chk"'
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/bin/echo 'Warning: non-existent sub-project "gap_stats"'
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/bin/echo 'Warning: non-existent sub-project "table2asn"'
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/bin/echo 'Warning: non-existent sub-project "srcchk"'
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/bin/echo 'Warning: non-existent sub-project "tableval"'
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/bin/echo 'Warning: non-existent sub-project "magicblast"'
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/bin/echo 'Warning: non-existent sub-project "pub_report"'
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/bin/echo 'Warning: non-existent sub-project "prot_match"'
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make[5]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/app'
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make[4]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build'
----------------------------------------------------------------------
Building check script...
SKIP -- objtools/blast/seqdb_reader/test/seqdb_perf (unmet CHECK_REQUIRES)
SKIP -- objtools/blast/seqdb_reader/test/seqdb_perf (unmet CHECK_REQUIRES)
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SKIP -- algo/blast/unit_tests/api/magicblast_unit_test (unmet CHECK_REQUIRES)
Done.
/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build/check.sh: 272: ulimit: error setting limit (Operation not permitted)
OK -- [serial/datatool] datatool.sh (real 0.57, user 0.29, sys 0.10)
SKP -- [serial/datatool] datatool_xml.sh
ABS -- [objects/genomecoll/gc_cli] test_gencoll_svc_ASSM
ABS -- [objects/genomecoll/gc_cli] test_gencoll_svc_ASSM_BY_SEQ
ABS -- [objects/genomecoll/gc_cli] test_gencoll_svc_TYPELOC
OK -- [objtools/blast/gene_info_reader/unit_test] gene_info_unit_test (real 0.06, user 0.02, sys 0.02)
OK -- [algo/blast/proteinkmer/unit_test] proteinkmer_unit_test (real 18.59, user 11.31, sys 3.30)
OK -- [algo/blast/unit_tests/api] blastdiag_unit_test (real 0.08, user 0.02, sys 0.04)
OK -- [algo/blast/unit_tests/api] aascan_unit_test (real 11.45, user 2.20, sys 7.54)
Succeeded : 5
Timeout : 0
Failed : 0
Absent : 4
******** ALL TESTS COMPLETED SUCCESSFULLY ********
make[3]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++/BUILD/build'
make[2]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1/c++'
c++/BUILD/build/check.sh concat_err
cat c++/BUILD/build/check.sh.out_err
make[1]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1'
fakeroot debian/rules binary-arch
# dh binary-arch -Dc++ --with autotools_dev
dh binary-arch -Dc++
dh_testroot -a -O-Dc\+\+
dh_prep -a -O-Dc\+\+
dh_installdirs -a -O-Dc\+\+
debian/rules override_dh_auto_install-arch
make[1]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1'
# cp c++/BUILD/lib/*.so debian/ncbi-blast+/usr/lib/ncbi-blast+/
cp c++/BUILD/bin/* debian/ncbi-blast+/usr/bin/
make[1]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1'
debian/rules override_dh_install-arch
make[1]: Entering directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1'
# dh_install
mv debian/ncbi-blast+/usr/bin/rpsblast debian/ncbi-blast+/usr/bin/rpsblast+
mv debian/ncbi-blast+/usr/bin/seedtop debian/ncbi-blast+/usr/bin/seedtop+
mv debian/ncbi-blast+/usr/bin/legacy_blast.pl debian/ncbi-blast+/usr/bin/legacy_blast
mv debian/ncbi-blast+/usr/bin/update_blastdb.pl debian/ncbi-blast+/usr/bin/update_blastdb
mv debian/ncbi-blast+/usr/bin/windowmasker_2.2.22_adapter.py \
debian/ncbi-blast+/usr/bin/windowmasker_2.2.22_adapter
rm -f debian/ncbi-blast+/usr/bin/*test* debian/ncbi-blast+/usr/bin/seqdb_demo \
debian/ncbi-blast+/usr/bin/datatool debian/ncbi-blast+/usr/bin/run_with_lock \
debian/ncbi-blast+/usr/bin/project_tree_builder
for x in debian/ncbi-blast+/usr/bin/*; do \
LD_LIBRARY_PATH=c++/BUILD/lib ldd $x; \
done 2>/dev/null | awk '/BUILD/ { print $3 }' | sort -u | \
xargs cp -v -t debian/ncbi-blast+/usr/lib/ncbi-blast+
'c++/BUILD/lib/libalign_format.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libalign_format.so'
'c++/BUILD/lib/libbiblio.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libbiblio.so'
'c++/BUILD/lib/libblast.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libblast.so'
'c++/BUILD/lib/libblast_services.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libblast_services.so'
'c++/BUILD/lib/libblastdb.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libblastdb.so'
'c++/BUILD/lib/libblastdb_format.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libblastdb_format.so'
'c++/BUILD/lib/libblastinput.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libblastinput.so'
'c++/BUILD/lib/libblastxml.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libblastxml.so'
'c++/BUILD/lib/libblastxml2.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libblastxml2.so'
'c++/BUILD/lib/libcomposition_adjustment.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libcomposition_adjustment.so'
'c++/BUILD/lib/libcreaders.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libcreaders.so'
'c++/BUILD/lib/libgbseq.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libgbseq.so'
'c++/BUILD/lib/libgene_info.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libgene_info.so'
'c++/BUILD/lib/libgeneral.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libgeneral.so'
'c++/BUILD/lib/libgenome_collection.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libgenome_collection.so'
'c++/BUILD/lib/libid1.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libid1.so'
'c++/BUILD/lib/libid2.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libid2.so'
'c++/BUILD/lib/libmedlars.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libmedlars.so'
'c++/BUILD/lib/libmedline.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libmedline.so'
'c++/BUILD/lib/libmla.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libmla.so'
'c++/BUILD/lib/libmlacli.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libmlacli.so'
'c++/BUILD/lib/libncbi_xloader_blastdb.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libncbi_xloader_blastdb.so'
'c++/BUILD/lib/libncbi_xloader_blastdb_rmt.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libncbi_xloader_blastdb_rmt.so'
'c++/BUILD/lib/libncbi_xloader_genbank.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libncbi_xloader_genbank.so'
'c++/BUILD/lib/libncbi_xreader.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libncbi_xreader.so'
'c++/BUILD/lib/libncbi_xreader_cache.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libncbi_xreader_cache.so'
'c++/BUILD/lib/libncbi_xreader_id1.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libncbi_xreader_id1.so'
'c++/BUILD/lib/libncbi_xreader_id2.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libncbi_xreader_id2.so'
'c++/BUILD/lib/libpub.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libpub.so'
'c++/BUILD/lib/libpubmed.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libpubmed.so'
'c++/BUILD/lib/libscoremat.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libscoremat.so'
'c++/BUILD/lib/libseq.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libseq.so'
'c++/BUILD/lib/libseqcode.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libseqcode.so'
'c++/BUILD/lib/libseqdb.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libseqdb.so'
'c++/BUILD/lib/libseqedit.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libseqedit.so'
'c++/BUILD/lib/libseqmasks_io.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libseqmasks_io.so'
'c++/BUILD/lib/libseqset.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libseqset.so'
'c++/BUILD/lib/libseqsplit.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libseqsplit.so'
'c++/BUILD/lib/libsequtil.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libsequtil.so'
'c++/BUILD/lib/libsubmit.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libsubmit.so'
'c++/BUILD/lib/libtables.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libtables.so'
'c++/BUILD/lib/libtaxon1.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libtaxon1.so'
'c++/BUILD/lib/libtaxon3.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libtaxon3.so'
'c++/BUILD/lib/libvalid.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libvalid.so'
'c++/BUILD/lib/libwritedb.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libwritedb.so'
'c++/BUILD/lib/libxalgoblastdbindex.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxalgoblastdbindex.so'
'c++/BUILD/lib/libxalgodustmask.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxalgodustmask.so'
'c++/BUILD/lib/libxalgosegmask.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxalgosegmask.so'
'c++/BUILD/lib/libxalgowinmask.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxalgowinmask.so'
'c++/BUILD/lib/libxalnmgr.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxalnmgr.so'
'c++/BUILD/lib/libxblast.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxblast.so'
'c++/BUILD/lib/libxblastformat.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxblastformat.so'
'c++/BUILD/lib/libxcgi.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxcgi.so'
'c++/BUILD/lib/libxcleanup.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxcleanup.so'
'c++/BUILD/lib/libxcompress.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxcompress.so'
'c++/BUILD/lib/libxconnect.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxconnect.so'
'c++/BUILD/lib/libxformat.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxformat.so'
'c++/BUILD/lib/libxhtml.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxhtml.so'
'c++/BUILD/lib/libxncbi.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxncbi.so'
'c++/BUILD/lib/libxnetblast.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxnetblast.so'
'c++/BUILD/lib/libxnetblastcli.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxnetblastcli.so'
'c++/BUILD/lib/libxobjmgr.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxobjmgr.so'
'c++/BUILD/lib/libxobjread.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxobjread.so'
'c++/BUILD/lib/libxobjutil.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxobjutil.so'
'c++/BUILD/lib/libxregexp.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxregexp.so'
'c++/BUILD/lib/libxser.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxser.so'
'c++/BUILD/lib/libxutil.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxutil.so'
make[1]: Leaving directory '/build/ncbi-blast+-T8rny7/ncbi-blast+-2.7.1'
dh_installdocs -a -O-Dc\+\+
dh_installchangelogs -a -O-Dc\+\+
dh_installexamples -a -O-Dc\+\+
dh_installman -a -O-Dc\+\+
dh_installcatalogs -a -O-Dc\+\+
dh_installcron -a -O-Dc\+\+
dh_installdebconf -a -O-Dc\+\+
dh_installemacsen -a -O-Dc\+\+
dh_installifupdown -a -O-Dc\+\+
dh_installinfo -a -O-Dc\+\+
dh_installinit -a -O-Dc\+\+
dh_installmenu -a -O-Dc\+\+
dh_installmime -a -O-Dc\+\+
dh_installmodules -a -O-Dc\+\+
dh_installlogcheck -a -O-Dc\+\+
dh_installlogrotate -a -O-Dc\+\+
dh_installpam -a -O-Dc\+\+
dh_installppp -a -O-Dc\+\+
dh_installudev -a -O-Dc\+\+
dh_installgsettings -a -O-Dc\+\+
dh_bugfiles -a -O-Dc\+\+
dh_ucf -a -O-Dc\+\+
dh_lintian -a -O-Dc\+\+
dh_gconf -a -O-Dc\+\+
dh_icons -a -O-Dc\+\+
dh_perl -a -O-Dc\+\+
dh_usrlocal -a -O-Dc\+\+
dh_link -a -O-Dc\+\+
dh_installwm -a -O-Dc\+\+
dh_installxfonts -a -O-Dc\+\+
dh_strip_nondeterminism -a -O-Dc\+\+
dh_compress -a -O-Dc\+\+
dh_fixperms -a -O-Dc\+\+
dh_missing -a -O-Dc\+\+
dh_strip -a -O-Dc\+\+
dh_makeshlibs -a -O-Dc\+\+
dh_shlibdeps -a -O-Dc\+\+
dh_installdeb -a -O-Dc\+\+
dh_gencontrol -a -O-Dc\+\+
dh_md5sums -a -O-Dc\+\+
dh_builddeb -a -O-Dc\+\+
dpkg-deb: building package 'ncbi-blast+-dbgsym' in '../ncbi-blast+-dbgsym_2.7.1-1+b3_armhf.deb'.
dpkg-deb: building package 'ncbi-blast+' in '../ncbi-blast+_2.7.1-1+b3_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian mythic lxc autobuilder 1 <root@raspbian.org> >../ncbi-blast+_2.7.1-1+b3_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build ncbi-blast+-2.7.1
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2018-10-10T14:15:13Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
ncbi-blast+_2.7.1-1+b3_armhf.changes:
-------------------------------------
Format: 1.8
Date: Sat, 10 Feb 2018 17:35:31 +0000
Source: ncbi-blast+ (2.7.1-1)
Binary: ncbi-blast+ ncbi-blast+-legacy blast2
Binary-Only: yes
Architecture: armhf
Version: 2.7.1-1+b3
Distribution: buster-staging
Urgency: low
Maintainer: Raspbian mythic lxc autobuilder 1 <root@raspbian.org>
Changed-By: Raspbian mythic lxc autobuilder 1 <root@raspbian.org>
Description:
blast2 - transitional dummy package to ncbi-blast+-legacy
ncbi-blast+ - next generation suite of BLAST sequence search tools
ncbi-blast+-legacy - NCBI Blast legacy call script
Changes:
ncbi-blast+ (2.7.1-1+b3) buster-staging; urgency=low, binary-only=yes
.
* Binary-only non-maintainer upload for armhf; no source changes.
* rebuild due to debcheck failure
Checksums-Sha1:
20e0266e4a7bd1a28461e2e54485dbc89fef4077 214441664 ncbi-blast+-dbgsym_2.7.1-1+b3_armhf.deb
70232067f53098cff567c585ab07f725dc1955a8 6127 ncbi-blast+_2.7.1-1+b3_armhf.buildinfo
f85a21975786710cb8f0124116aae55d6dfc55eb 8041880 ncbi-blast+_2.7.1-1+b3_armhf.deb
Checksums-Sha256:
a108c85b47f3a76ca70eef7abd50b28be43b8daa6132d7736743bc68381bb221 214441664 ncbi-blast+-dbgsym_2.7.1-1+b3_armhf.deb
f828d0137c69c5470962fc68072d204084824258f59ea13a550b6c2d7c0c79c7 6127 ncbi-blast+_2.7.1-1+b3_armhf.buildinfo
a725b3dd6f006cfdcef5fe5d914163a15e5b59ad884eb93455ceaffa68d9a69b 8041880 ncbi-blast+_2.7.1-1+b3_armhf.deb
Files:
984555317fd8e208c75b8e5a0e063031 214441664 debug optional ncbi-blast+-dbgsym_2.7.1-1+b3_armhf.deb
3daf87f663b90b453eaac3a8ff8fb717 6127 science optional ncbi-blast+_2.7.1-1+b3_armhf.buildinfo
4beb5e925f26f2a248bbebaa3863a68f 8041880 science optional ncbi-blast+_2.7.1-1+b3_armhf.deb
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
ncbi-blast+-dbgsym_2.7.1-1+b3_armhf.deb
---------------------------------------
new Debian package, version 2.0.
size 214441664 bytes: control archive=4552 bytes.
4095 bytes, 12 lines control
9646 bytes, 91 lines md5sums
Package: ncbi-blast+-dbgsym
Source: ncbi-blast+ (2.7.1-1)
Version: 2.7.1-1+b3
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 220323
Depends: ncbi-blast+ (= 2.7.1-1+b3)
Section: debug
Priority: optional
Description: debug symbols for ncbi-blast+
Build-Ids: 04355f835f9da40ce13c299ddcf92984b4ab33b2 04ec216e0dad6829b5b2e0819d125bcb4a09c3a3 07786fd02088221b8d934bdf1e61a1c5ebee4db4 0a09ece0db19f90d6e5d4c1194c11782ac3518b0 0b2d93cd3dcb8ceb8199e8a500f3f7594c37bcd4 0e8f148273e0e6616064c658ac3ad8db97405aac 1617bc8b7a0ae3121ae51ecc51fd3e935f8cbc2c 165ba73192be5a0375eaea25535eb83e504e7cd0 17becb153101aafd619c3e27ccd96d153a30a0da 183e2ce2976185e0c57f79581f76b758ca100234 1b1ec5520f7407f34af8b27bdb7a98348d2d18b6 1d19cea446744cce75c324c258c02395f6993940 1f468b121c19dc447a1e45e8860639446d5d1b9e 228abb6c534ae68e11d9a7a590e6bdaa9658d41a 232b424bb1646465c6aa5a520d39b45aa6d62911 255405d1b40606530291ef975e6f9531f4731353 27b5f5277261070ead7ecad8c57519b831c0be1c 2951722ef7a4cf062a1a33f1e6a98e3febb22820 2976ab1f67e71c0abdfb9b8066cdf6af9f7a2d06 2def04386d87b5479e6e9b7f446a16f7ae202ca9 3160b3c02453551b2c0726bb5922219a78cd1654 358418980678e66a3988a366250637251f125849 3cd2cbbddf4d07f4ea8c9fe1b479181a8f3e52a7 3f51c82996976ce9b22036cb9ae2de2326c95ad7 46dee84a6c5f7f6c6f3202f2d7109979d932a044 4a5e2b9a4b05f957f32af230d0b14afcecdea944 4aab67632ca373b05897c5edc01f413500495529 4dafbeeee26453d85aba4b869d1cf8fd995dcc18 4f0e7409f9de7065341f9dd6a6eda5a9a4473d94 4fef893cc2af1c2a8ca1c990db8bd26010a66c91 5037dabdee33ff3347fa9af344424d68f5ddd475 50d799d31ad336330a52ab3e4e35dd2cfeef4a73 51819604c2d432be54c164cde98a214599d3f89f 5225bf8004a543e49824cddb56b986788104fe57 5425fe8895da7c224a910c57867d6604734f9832 54e6faf743c3a7d7e5d78e48659ee69aa2690b3c 5725cf912d3c55df2956d72a097dad2007e11fe2 57d99fdad9ab8889fa801881cfef55b3d9a9476f 5a845018063521c74ec1d2bbe5cd280acb83c53b 5e7e19f59facb66db01a02f591767daf51bc26f5 5f5483c155980ecba027e85dc11d9d6a16211ebf 6445f9835c34dfeddeb241dc86cf63b192f11881 647db8d26c205552623c29576da860e42d54410b 65166d9926a1e1d72f88c7a9a18abf85818af8cb 672bde9ff9c7443f0dd61991968822c9e1398589 697bcb89a0388360eca3db973be2f511c07eb4f3 6b3423ad14e7c3c4f991d9b2719300c2b29e0cfd 6b98c5adcb1fcbac38354e5a5207371cca0a0a3c 6e34bd342b108bc5ec76577f160f643a38880a06 732b3ba4844362374dfbbddac8a7c0dab0d6176d 76969b8d53a9bf6ff42dba75dedfe6d40fc9ef02 7a49eb32aab8e6f4e9ef8028a9c8e118427417ea 80921fc2625bec25040a2e8d6ac5336572707ee4 88e6b5abc0e1321664ac516ac8c69d836ceb73f4 8aee7926a957f87d3427fbf56c4e936b83771418 8c23137be6ac83eb50123f562afaefbd72f89cad 8d43839af768927721464f932c6cfab9092220d2 91a0fc959379ea49f30aa09a4e8bec9599c6de21 9278e39ea56c608bea3d400874b04050a258d961 93432ff150c61f629c6b58f64990d835f01776a5 93db8e9d741c4533ccc2c20f0c156151c053a555 96fe01a6e028008ec6a69b3b26d5a8be7e4590fc 9b42d8f55b861302662a7c32c1f29061e2125628 9d20c0d89bb630d48a3e7e5b20cfd27712a9ad0e 9e784c0032eddeb1f6bc80c86f5173a78d99f508 a135fb625e61e156e76a258ab29e96a02fc4dade a1e1ddcf4a556605a0b5f31a99f8a63a0371686d a5eafe9c445d63c46bd2a63e5f2d614ea5bd4a24 abb14d30880949acaa595114a95d989a9bdf7250 afbab3572843f8b248ec57efbf978a64370f4d6f b0c6594a02d41bb3a6cd6a5cc2933671206b3a8c b0e67244a28e2ab724cd75f38760de5972029592 b6c6c85ec0c54b1563dacbda56d0c5616f2ae2b5 c1272855e32e8bab6b589a5abcc3be9cd3a3e419 c5bb58d4059acdeac03c559e3ea7022b215461b0 cdc80524b94ea3003953b5e18bce514fbcad17f4 d108cda889a25953afa730e180396e22917d854b d1f151c03c30767e518ff1a398ae4a649a72118a d71da8501c75413461c6eedfe7be27687e2df449 d8d8b29b0d9525b066269f0747d559966bf13625 db69a36b4c5488997448e75e342f8b3e37587afd dd417745a9cfc41fcf87651d0c2d56d3e1f73cc7 e04bf2e920b78c9b401d28b3dd1db4913b093863 e23294bc57009438670a443f29ecb5499bd8cdb3 e61626439471d45e88f5fd98b646c708bb06405c e69a9e97b6df05caf6745529f5ebf01c4eab1fab e852e9223a3097aed8bb4568fd4f4a935032e392 ebe55792c0b706a201a55d70b60a8f90d0e3597c f0b89e0f14176eb37563b00ba5b311911452fdca f8b81adb825400e1062b6dd1eb613063913751c3 f98f5ca57b6cbc0be9100e9e60ae955b24e0edbc
drwxr-xr-x root/root 0 2018-02-10 17:35 ./
drwxr-xr-x root/root 0 2018-02-10 17:35 ./usr/
drwxr-xr-x root/root 0 2018-02-10 17:35 ./usr/lib/
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ncbi-blast+_2.7.1-1+b3_armhf.deb
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new Debian package, version 2.0.
size 8041880 bytes: control archive=3612 bytes.
1320 bytes, 25 lines control
6692 bytes, 101 lines md5sums
Package: ncbi-blast+
Source: ncbi-blast+ (2.7.1-1)
Version: 2.7.1-1+b3
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 34007
Depends: ncbi-data, python, perl:any, libbz2-1.0, libc6 (>= 2.15), libgcc1 (>= 1:3.5), libgnutls30 (>= 3.5.6), libgomp1 (>= 4.9), libmbedcrypto3 (>= 2.13), libmbedtls12 (>= 2.13), libpcre3, libstdc++6 (>= 5.2), zlib1g (>= 1:1.2.11.dfsg)
Enhances: t-coffee
Section: science
Priority: optional
Multi-Arch: foreign
Homepage: http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/
Description: next generation suite of BLAST sequence search tools
The Basic Local Alignment Search Tool (BLAST) is the most widely
used sequence similarity tool. There are versions of BLAST that
compare protein queries to protein databases, nucleotide queries
to nucleotide databases, as well as versions that translate nucleotide
queries or databases in all six frames and compare to protein databases
or queries.
PSI-BLAST produces a position-specific-scoring-matrix (PSSM) starting
with a protein query, and then uses that PSSM to perform further searches.
It is also possible to compare a protein or nucleotide query to a
database of PSSM’s.
The NCBI supports a BLAST web page at blast.ncbi.nlm.nih.gov as well as
a network service.
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Build Architecture: armhf
Build-Space: 3669644
Build-Time: 4130
Distribution: buster-staging
Host Architecture: armhf
Install-Time: 203
Job: ncbi-blast+_2.7.1-1
Machine Architecture: armhf
Package: ncbi-blast+
Package-Time: 4370
Source-Version: 2.7.1-1
Space: 3669644
Status: successful
Version: 2.7.1-1+b3
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Finished at 2018-10-10T14:15:13Z
Build needed 01:12:50, 3669644k disk space