ncbi-blast+ →
2.7.1-1+b1 →
armhf → 2018-02-22 06:34:00
sbuild (Debian sbuild) 0.72.0 (25 Oct 2016) on mb-lxc-01
+==============================================================================+
| ncbi-blast+ 2.7.1-1+b1 (armhf) Thu, 22 Feb 2018 05:18:33 +0000 |
+==============================================================================+
Package: ncbi-blast+
Version: 2.7.1-1+b1
Source Version: 2.7.1-1
Distribution: buster-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/buster-staging-armhf-sbuild-7094eef1-01d8-4d11-aae3-b5d1e7bc4f84' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private buster-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private buster-staging/main Sources [10.6 MB]
Get:3 http://172.17.0.1/private buster-staging/main armhf Packages [12.3 MB]
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Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'ncbi-blast+' packaging is maintained in the 'Git' version control system at:
https://anonscm.debian.org/git/debian-med/ncbi-blast+.git
Please use:
git clone https://anonscm.debian.org/git/debian-med/ncbi-blast+.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 23.7 MB of source archives.
Get:1 http://172.17.0.1/private buster-staging/main ncbi-blast+ 2.7.1-1 (dsc) [2305 B]
Get:2 http://172.17.0.1/private buster-staging/main ncbi-blast+ 2.7.1-1 (tar) [23.7 MB]
Get:3 http://172.17.0.1/private buster-staging/main ncbi-blast+ 2.7.1-1 (diff) [21.2 kB]
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Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/ncbi-blast+-aJeFN8' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/build/ncbi-blast+-aJeFN8/resolver-NF3tMr/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/build/ncbi-blast+-aJeFN8/resolver-NF3tMr/gpg/pubring.kbx' created
gpg: /build/ncbi-blast+-aJeFN8/resolver-NF3tMr/gpg/trustdb.gpg: trustdb created
gpg: key 37145E60F90AF620: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 37145E60F90AF620: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 37145E60F90AF620: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/build/ncbi-blast+-aJeFN8/resolver-NF3tMr/apt_archive ./ InRelease
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Get:3 copy:/build/ncbi-blast+-aJeFN8/resolver-NF3tMr/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/build/ncbi-blast+-aJeFN8/resolver-NF3tMr/apt_archive ./ Sources [349 B]
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Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
ca-certificates e2fsprogs-l10n libsasl2-modules libssl1.1 openssl
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 78 not upgraded.
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debconf: delaying package configuration, since apt-utils is not installed
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Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
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+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any all)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: autotools-dev, debhelper (>= 9), libboost-test-dev, libbz2-dev, libc-dev-bin, libgnutls28-dev, libmbedtls-dev, libpcre3-dev, time, zlib1g-dev
Filtered Build-Depends: autotools-dev, debhelper (>= 9), libboost-test-dev, libbz2-dev, libc-dev-bin, libgnutls28-dev, libmbedtls-dev, libpcre3-dev, time, zlib1g-dev
dpkg-deb: building package 'sbuild-build-depends-ncbi-blast+-dummy' in '/build/ncbi-blast+-aJeFN8/resolver-NF3tMr/apt_archive/sbuild-build-depends-ncbi-blast+-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-ncbi-blast+-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/build/ncbi-blast+-aJeFN8/resolver-NF3tMr/apt_archive ./ InRelease
Get:2 copy:/build/ncbi-blast+-aJeFN8/resolver-NF3tMr/apt_archive ./ Release [963 B]
Get:3 copy:/build/ncbi-blast+-aJeFN8/resolver-NF3tMr/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/build/ncbi-blast+-aJeFN8/resolver-NF3tMr/apt_archive ./ Sources [551 B]
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Fetched 2519 B in 0s (12.7 kB/s)
Reading package lists...
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Reading package lists...
Install ncbi-blast+ build dependencies (apt-based resolver)
-----------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
ca-certificates e2fsprogs-l10n libsasl2-modules libssl1.1 openssl
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils debhelper
dh-autoreconf dh-strip-nondeterminism file gettext gettext-base groff-base
intltool-debian libarchive-zip-perl libboost-chrono1.62.0
libboost-system1.62.0 libboost-test-dev libboost-test1.62-dev
libboost-test1.62.0 libboost-timer1.62.0 libboost1.62-dev libbsd0 libbz2-dev
libcroco3 libevent-2.1-6 libfile-stripnondeterminism-perl libgdbm5
libglib2.0-0 libgmp-dev libgmpxx4ldbl libgnutls-dane0 libgnutls-openssl27
libgnutls28-dev libgnutlsxx28 libicu57 libidn2-0-dev libidn2-dev
libmagic-mgc libmagic1 libmbedcrypto1 libmbedtls-dev libmbedtls10
libmbedx509-0 libp11-kit-dev libpcre16-3 libpcre3 libpcre3-dev libpcre32-3
libpcrecpp0v5 libpipeline1 libsigsegv2 libtasn1-6-dev libtimedate-perl
libtool libunbound2 libxml2 m4 man-db nettle-dev po-debconf time zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
vacation dh-make dwz gettext-doc libasprintf-dev libgettextpo-dev groff
libboost1.62-doc libboost-atomic1.62-dev libboost-chrono1.62-dev
libboost-context1.62-dev libboost-coroutine1.62-dev
libboost-date-time1.62-dev libboost-exception1.62-dev libboost-fiber1.62-dev
libboost-filesystem1.62-dev libboost-graph1.62-dev
libboost-graph-parallel1.62-dev libboost-iostreams1.62-dev
libboost-locale1.62-dev libboost-log1.62-dev libboost-math1.62-dev
libboost-mpi1.62-dev libboost-mpi-python1.62-dev
libboost-program-options1.62-dev libboost-python1.62-dev
libboost-random1.62-dev libboost-regex1.62-dev
libboost-serialization1.62-dev libboost-signals1.62-dev
libboost-system1.62-dev libboost-thread1.62-dev libboost-timer1.62-dev
libboost-type-erasure1.62-dev libboost-wave1.62-dev libboost1.62-tools-dev
libmpfrc++-dev libntl-dev gdbm-l10n gmp-doc libgmp10-doc libmpfr-dev
dns-root-data gnutls-doc gnutls-bin libmbedtls-doc libtool-doc gfortran
| fortran95-compiler gcj-jdk m4-doc apparmor less www-browser
libmail-box-perl
Recommended packages:
curl | wget | lynx-cur bzip2-doc libarchive-cpio-perl libglib2.0-data
shared-mime-info xdg-user-dirs libtasn1-doc libltdl-dev
libmail-sendmail-perl
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils debhelper
dh-autoreconf dh-strip-nondeterminism file gettext gettext-base groff-base
intltool-debian libarchive-zip-perl libboost-chrono1.62.0
libboost-system1.62.0 libboost-test-dev libboost-test1.62-dev
libboost-test1.62.0 libboost-timer1.62.0 libboost1.62-dev libbsd0 libbz2-dev
libcroco3 libevent-2.1-6 libfile-stripnondeterminism-perl libgdbm5
libglib2.0-0 libgmp-dev libgmpxx4ldbl libgnutls-dane0 libgnutls-openssl27
libgnutls28-dev libgnutlsxx28 libicu57 libidn2-0-dev libidn2-dev
libmagic-mgc libmagic1 libmbedcrypto1 libmbedtls-dev libmbedtls10
libmbedx509-0 libp11-kit-dev libpcre16-3 libpcre3-dev libpcre32-3
libpcrecpp0v5 libpipeline1 libsigsegv2 libtasn1-6-dev libtimedate-perl
libtool libunbound2 libxml2 m4 man-db nettle-dev po-debconf
sbuild-build-depends-ncbi-blast+-dummy time zlib1g-dev
The following packages will be upgraded:
libpcre3
1 upgraded, 62 newly installed, 0 to remove and 77 not upgraded.
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Get:2 http://172.17.0.1/private buster-staging/main armhf libbsd0 armhf 0.8.7-1 [96.8 kB]
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Setting up gettext-base (0.19.8.1-4) ...
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Setting up libcroco3:armhf (0.6.12-2) ...
Setting up libgnutlsxx28:armhf (3.5.17-1) ...
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Setting up autotools-dev (20171216.1) ...
Setting up libgnutls-openssl27:armhf (3.5.17-1) ...
Setting up libpcrecpp0v5:armhf (2:8.39-9) ...
Setting up libpcre32-3:armhf (2:8.39-9) ...
Setting up libmbedx509-0:armhf (2.7.0-2) ...
Setting up libpcre16-3:armhf (2:8.39-9) ...
Setting up bsdmainutils (11.1.2) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
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Setting up libidn2-dev:armhf (2.0.4-1.1) ...
Setting up libidn2-0-dev (2.0.4-1.1) ...
Setting up autopoint (0.19.8.1-4) ...
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Setting up zlib1g-dev:armhf (1:1.2.8.dfsg-5) ...
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Setting up libgmp-dev:armhf (2:6.1.2+dfsg-2) ...
Setting up libunbound2:armhf (1.6.7-1+b1) ...
Setting up libpcre3-dev:armhf (2:8.39-9) ...
Setting up libmbedtls10:armhf (2.7.0-2) ...
Setting up gettext (0.19.8.1-4) ...
Setting up autoconf (2.69-11) ...
Setting up file (1:5.32-2) ...
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Setting up intltool-debian (0.35.0+20060710.4) ...
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Setting up automake (1:1.15.1-3) ...
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Setting up man-db (2.8.1-1+b1) ...
Not building database; man-db/auto-update is not 'true'.
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Setting up po-debconf (1.0.20) ...
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Setting up libboost-test-dev:armhf (1.62.0.1+b8) ...
Setting up dh-strip-nondeterminism (0.040-1) ...
Setting up debhelper (11.1.4) ...
Setting up dh-autoreconf (16) ...
Setting up sbuild-build-depends-ncbi-blast+-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.26-4+rpi1) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.4.0-79-generic armhf (armv8l)
Toolchain package versions: binutils_2.29.1-13+rpi1 dpkg-dev_1.19.0.5 g++-7_7.2.0-19+b1 gcc-7_7.2.0-19+b1 libc6-dev_2.26-4+rpi1 libstdc++-7-dev_7.2.0-19+b1 libstdc++6_7.2.0-19+b1 linux-libc-dev_4.9.51-1+rpi3+b1
Package versions: adduser_3.116 apt_1.6~alpha6 autoconf_2.69-11 automake_1:1.15.1-3 autopoint_0.19.8.1-4 autotools-dev_20171216.1 base-files_10.1+rpi1 base-passwd_3.5.44 bash_4.4-5 binutils_2.29.1-13+rpi1 binutils-arm-linux-gnueabihf_2.29.1-13+rpi1 binutils-common_2.29.1-13+rpi1 bsdmainutils_11.1.2 bsdutils_1:2.30.2-0.3 build-essential_12.4 bzip2_1.0.6-8.1 ca-certificates_20170717 coreutils_8.28-1 cpio_2.12+dfsg-6 cpp_4:7.2.0-1d1 cpp-7_7.2.0-19+b1 dash_0.5.8-2.10 debconf_1.5.65 debhelper_11.1.4 debianutils_4.8.4 dh-autoreconf_16 dh-strip-nondeterminism_0.040-1 diffutils_1:3.6-1 dirmngr_2.2.4-1 dmsetup_2:1.02.145-4.1 dpkg_1.19.0.5 dpkg-dev_1.19.0.5 e2fslibs_1.43.8-2 e2fsprogs_1.43.8-2 e2fsprogs-l10n_1.43.8-2 fakeroot_1.22-2 fdisk_2.30.2-0.3 file_1:5.32-2 findutils_4.6.0+git+20170828-2 g++_4:7.2.0-1d1 g++-7_7.2.0-19+b1 gcc_4:7.2.0-1d1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-4 gcc-4.9-base_4.9.3-14 gcc-5-base_5.4.1-4 gcc-7_7.2.0-19+b1 gcc-7-base_7.2.0-19+b1 gettext_0.19.8.1-4 gettext-base_0.19.8.1-4 gnupg_2.2.4-1 gnupg-agent_2.2.4-1 gnupg-l10n_2.2.4-1 gnupg-utils_2.2.4-1 gpg_2.2.4-1 gpg-agent_2.2.4-1 gpg-wks-client_2.2.4-1 gpg-wks-server_2.2.4-1 gpgconf_2.2.4-1 gpgsm_2.2.4-1 gpgv_2.2.4-1 grep_3.1-2 groff-base_1.22.3-10 gzip_1.6-5 hostname_3.20 init-system-helpers_1.51 initramfs-tools_0.130 initramfs-tools-core_0.130 intltool-debian_0.35.0+20060710.4 klibc-utils_2.0.4-11+rpi1 kmod_25-1 libacl1_2.2.52-3 libapparmor1_2.12-2 libapt-pkg5.0_1.6~alpha6 libarchive-zip-perl_1.60-1 libasan4_7.2.0-19+b1 libassuan0_2.5.1-1 libatomic1_7.2.0-19+b1 libattr1_1:2.4.47-2 libaudit-common_1:2.8.2-1 libaudit1_1:2.8.2-1 libbinutils_2.29.1-13+rpi1 libblkid1_2.30.2-0.3 libboost-chrono1.62.0_1.62.0+dfsg-5 libboost-system1.62.0_1.62.0+dfsg-5 libboost-test-dev_1.62.0.1+b8 libboost-test1.62-dev_1.62.0+dfsg-5 libboost-test1.62.0_1.62.0+dfsg-5 libboost-timer1.62.0_1.62.0+dfsg-5 libboost1.62-dev_1.62.0+dfsg-5 libbsd0_0.8.7-1 libbz2-1.0_1.0.6-8.1 libbz2-dev_1.0.6-8.1 libc-bin_2.26-4+rpi1 libc-dev-bin_2.26-4+rpi1 libc6_2.26-4+rpi1 libc6-dev_2.26-4+rpi1 libcap-ng0_0.7.7-3.1+b1 libcap2_1:2.25-1.2 libcc1-0_7.2.0-19+b1 libcilkrts5_7.2.0-19+b1 libcomerr2_1.43.8-2 libcroco3_0.6.12-2 libcryptsetup4_2:1.7.5-1 libdb5.3_5.3.28-13.1 libdbus-1-3_1.12.2-1 libdebconfclient0_0.239 libdevmapper1.02.1_2:1.02.145-4.1 libdpkg-perl_1.19.0.5 libdrm-common_2.4.89-1+rpi1 libdrm2_2.4.89-1+rpi1 libevent-2.1-6_2.1.8-stable-4 libfakeroot_1.22-2 libfdisk1_2.30.2-0.3 libffi6_3.2.1-8 libfile-stripnondeterminism-perl_0.040-1 libgcc-7-dev_7.2.0-19+b1 libgcc1_1:7.2.0-19+b1 libgcrypt20_1.8.1-4 libgdbm3_1.8.3-14 libgdbm5_1.14.1-3 libglib2.0-0_2.54.3-2 libgmp-dev_2:6.1.2+dfsg-2 libgmp10_2:6.1.2+dfsg-2 libgmpxx4ldbl_2:6.1.2+dfsg-2 libgnutls-dane0_3.5.17-1 libgnutls-openssl27_3.5.17-1 libgnutls28-dev_3.5.17-1 libgnutls30_3.5.17-1 libgnutlsxx28_3.5.17-1 libgomp1_7.2.0-19+b1 libgpg-error0_1.27-5 libhogweed4_3.4-1 libicu57_57.1-8 libidn11_1.33-2.1 libidn2-0_2.0.4-1.1 libidn2-0-dev_2.0.4-1.1 libidn2-dev_2.0.4-1.1 libip4tc0_1.6.1-2+b1 libisl15_0.18-1 libklibc_2.0.4-11+rpi1 libkmod2_25-1 libksba8_1.3.5-2 libldap-2.4-2_2.4.45+dfsg-1 libldap-common_2.4.45+dfsg-1 liblz4-1_0.0~r131-2 liblzma5_5.2.2-1.3 libmagic-mgc_1:5.32-2 libmagic1_1:5.32-2 libmbedcrypto1_2.7.0-2 libmbedtls-dev_2.7.0-2 libmbedtls10_2.7.0-2 libmbedx509-0_2.7.0-2 libmount1_2.30.2-0.3 libmpc3_1.1.0-1 libmpfr6_4.0.0-7 libncurses5_6.0+20171125-1 libncursesw5_6.0+20171125-1 libnettle6_3.4-1 libnpth0_1.5-3 libp11-kit-dev_0.23.9-2 libp11-kit0_0.23.9-2 libpam-modules_1.1.8-3.6 libpam-modules-bin_1.1.8-3.6 libpam-runtime_1.1.8-3.6 libpam0g_1.1.8-3.6 libpcre16-3_2:8.39-9 libpcre3_2:8.39-9 libpcre3-dev_2:8.39-9 libpcre32-3_2:8.39-9 libpcrecpp0v5_2:8.39-9 libperl5.24_5.24.1-7 libperl5.26_5.26.1-4 libpipeline1_1.5.0-1 libplymouth4_0.9.3-2 libpng16-16_1.6.34-1 libprocps6_2:3.3.12-3 libreadline7_7.0-3 libsasl2-2_2.1.27~101-g0780600+dfsg-3 libsasl2-modules_2.1.27~101-g0780600+dfsg-3 libsasl2-modules-db_2.1.27~101-g0780600+dfsg-3 libseccomp2_2.3.1-2.1 libselinux1_2.7-2 libsemanage-common_2.7-2 libsemanage1_2.7-2 libsepol1_2.7-1 libsigsegv2_2.12-1 libsmartcols1_2.30.2-0.3 libsqlite3-0_3.22.0-1 libss2_1.43.8-2 libssl1.1_1.1.0g-2 libstdc++-7-dev_7.2.0-19+b1 libstdc++6_7.2.0-19+b1 libsystemd0_236-2 libtasn1-6_4.13-2 libtasn1-6-dev_4.13-2 libtimedate-perl_2.3000-2 libtinfo5_6.0+20171125-1 libtool_2.4.6-2 libubsan0_7.2.0-19+b1 libudev1_236-2 libunbound2_1.6.7-1+b1 libunistring2_0.9.8-1 libustr-1.0-1_1.0.4-6 libuuid1_2.30.2-0.3 libxml2_2.9.4+dfsg1-6.1 linux-base_4.5 linux-libc-dev_4.9.51-1+rpi3+b1 login_1:4.5-1 lsb-base_9.20170808+rpi1 m4_1.4.18-1 make_4.1-9.1 makedev_2.3.1-93 man-db_2.8.1-1+b1 mawk_1.3.3-17 mount_2.30.2-0.3 multiarch-support_2.26-4+rpi1 nano_2.9.2-1 ncurses-base_6.0+20171125-1 ncurses-bin_6.0+20171125-1 nettle-dev_3.4-1 openssl_1.1.0g-2 passwd_1:4.5-1 patch_2.7.5-1 perl_5.26.1-4 perl-base_5.26.1-4 perl-modules-5.24_5.24.1-7 perl-modules-5.26_5.26.1-4 pinentry-curses_1.0.0-3 plymouth_0.9.3-2 po-debconf_1.0.20 procps_2:3.3.12-3 raspbian-archive-keyring_20120528.2 readline-common_7.0-3 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-ncbi-blast+-dummy_0.invalid.0 sed_4.4-2 sensible-utils_0.0.11 systemd_236-2 sysvinit-utils_2.88dsf-59.10 tar_1.29b-2 time_1.7-25.1 tzdata_2018c-1 udev_236-2 util-linux_2.30.2-0.3 xz-utils_5.2.2-1.3 zlib1g_1:1.2.8.dfsg-5 zlib1g-dev_1:1.2.8.dfsg-5
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Thu Feb 15 11:14:18 2018 UTC
gpgv: using RSA key 78DC68DB326D8438
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./ncbi-blast+_2.7.1-1.dsc
dpkg-source: info: extracting ncbi-blast+ in /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1
dpkg-source: info: unpacking ncbi-blast+_2.7.1.orig.tar.gz
dpkg-source: info: unpacking ncbi-blast+_2.7.1-1.debian.tar.xz
dpkg-source: info: applying enable_clean_after_failed_compile
dpkg-source: info: applying hurd_fixes
dpkg-source: info: applying legacy_rename_rpsblast
dpkg-source: info: applying fix_lib_deps
dpkg-source: info: applying no_multiarch_rpath
dpkg-source: info: applying use_pie_for_apps
dpkg-source: info: applying skip_services_unit_test
dpkg-source: info: applying fix_configure
dpkg-source: info: applying support_x32
dpkg-source: info: applying suppress_gnutls_version_check
dpkg-source: info: applying optionally_keep_sequence
dpkg-source: info: applying fix_unit_tests
dpkg-source: info: applying remove_embedded_mbedtls
Check disk space
----------------
Sufficient free space for build
Hack binNMU version
-------------------
Created changelog entry for binNMU version 2.7.1-1+b1
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=buster-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=buster-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=112
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=buster-staging-armhf-sbuild-7094eef1-01d8-4d11-aae3-b5d1e7bc4f84
SCHROOT_UID=107
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package ncbi-blast+
dpkg-buildpackage: info: source version 2.7.1-1+b1
dpkg-buildpackage: info: source distribution buster-staging
dpkg-source --before-build ncbi-blast+-2.7.1
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
# dh clean -Dc++ --with autotools_dev
dh clean -Dc++
dh_testdir -O-Dc\+\+
dh_auto_clean -O-Dc\+\+
debian/rules override_dh_clean
make[1]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1'
cp c++/configure.orig configure.orig.save
dh_clean
#Tricky - for each module directory there may be several module files
#or there may be none but then there is still a module named after the
#directory. Clean everything!
for x in c++/src/objects/* ; do \
(cd "$x" && ( \
mods="`echo *.module`" ; \
[ "${mods#*\*}" = "$mods" ] || mods="`basename $x`" ; \
for mod in $mods ; do \
../../../BUILD/build/new_module.sh $mod purge_sources ; \
done ) ; \
) ; \
done
/bin/sh: 2: cd: can't cd to c++/src/objects/CMakeLists.txt
/bin/sh: 2: cd: can't cd to c++/src/objects/Makefile.in
/bin/sh: 2: cd: can't cd to c++/src/objects/Makefile.sources
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
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/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
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/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
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/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 2: cd: can't cd to c++/src/objects/nt_sources.cmd
/bin/sh: 2: cd: can't cd to c++/src/objects/nt_sources.sh
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
/bin/sh: 6: ../../../BUILD/build/new_module.sh: not found
debian/rules:103: recipe for target 'override_dh_clean' failed
make[1]: [override_dh_clean] Error 127 (ignored)
rm -rf c++/compilers/dll c++/config.log c++/Makefile
rm -f c++/configure.lineno c++/src/objects/blastxml/blastxml.module
find -name check_exec.pid -delete
rm -rf c++/BUILD
mv configure.orig.save c++/configure.orig
make[1]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1'
debian/rules build-arch
# dh build-arch -Dc++ --with autotools_dev
dh build-arch -Dc++
dh_testdir -a -O-Dc\+\+
dh_update_autotools_config -a -O-Dc\+\+
debian/rules override_dh_auto_configure
make[1]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1'
cd c++ && LD_LIBRARY_PATH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib${LD_LIBRARY_PATH+:$LD_LIBRARY_PATH} \
CONFIG_SHELL=/bin/bash ./configure --with-dll --with-mt --without-autodep --without-makefile-auto-update --with-flat-makefile --without-caution --without-dbapi --without-lzo --with-runpath=/usr/lib/ncbi-blast+ --with-build-root=BUILD --without-debug --without-downloaded-vdb --with-mbedtls --with-symbols CFLAGS_FOR_BUILD="-g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIE" LDFLAGS_FOR_BUILD="-specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed" \
|| (tail -v -n +0 config.log BUILD/status/config.log; exit 1)
configure: loading site script ./src/build-system/config.site
configure: creating cache config.cache
configure: WARNING: --with(out)-dbapi is deprecated
configure: WARNING: please simply pass an appropriate project list
checking TeamCity build number... none
checking Subversion revision... unknown
checking NCBI stable components' version... unknown
checking build system type... armv8l-unknown-linux-gnueabihf
checking host system type... armv8l-unknown-linux-gnueabihf
checking for a BSD-compatible install... /usr/bin/install -c
checking for gcc... gcc
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables...
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking how to run the C preprocessor... gcc -E
checking for gcc... gcc
checking whether we are using the GNU C compiler... (cached) yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking how to run the C preprocessor... gcc -E
checking for g++... g++
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
adjusted C compiler: /usr/bin/gcc
adjusted C++ compiler: /usr/bin/g++
checking whether /usr/bin/gcc has an option to export all symbols... -Wl,-export-dynamic
checking whether /usr/bin/gcc supports -Wl,--{en,dis}able-new-dtags... yes
checking whether /usr/bin/gcc has an option to discard unneeded shared libraries... -Wl,--as-needed
checking whether /usr/bin/gcc has an option to link in whole static archives... -Wl,--whole-archive
checking whether _LIBCPP_VERSION is declared... no
checking how to enable C++ '11 features in /usr/bin/g++ ... -std=gnu++11
checking how to enable C '11 or at least '99 features in /usr/bin/gcc ... -std=gnu11 -fgnu89-inline
checking for dpkg-architecture... /usr/bin/dpkg-architecture
checking for gawk... no
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checking for GNU make... /usr/bin/make
checking for /usr/bin/make... /usr/bin/make
checking whether ln -s works... yes
checking for ranlib... ranlib
checking for ar... ar cr
checking ranlib's effectiveness... neutral
checking for strip... strip
checking whether strip loses runtime type information... no
checking for ccache... no
checking for tail... /usr/bin/tail
checking whether /usr/bin/tail accepts modern syntax (-n N)... yes
checking for basename... /usr/bin/basename
checking for sed... /bin/sed
checking for touch... /bin/touch
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking how to run /bin/grep -E quietly... /bin/grep -E -q
checking for valgrind... no
checking for ldd... /usr/bin/ldd
checking whether /usr/bin/ldd accepts -r... yes
checking for uuidgen... no
checking for cd_reporter... no
checking how to run the C++ preprocessor... /usr/bin/g++ -std=gnu++11 -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
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checking for size_t... (cached) yes
checking size of size_t... 4
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checking whether /usr/bin/gcc -std=gnu11 -fgnu89-inline supports -Wl,--no-allow-shlib-undefined... yes
checking how to run the C preprocessor... gcc -E
checking whether cross-directory hard links work... yes
checking iostream usability... yes
checking iostream presence... yes
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checking iostream.h usability... no
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checking fstream usability... yes
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checking fstream.h usability... no
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checking strstream usability... yes
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checking strstream.h usability... no
checking strstream.h presence... no
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checking strstrea.h usability... no
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checking for strstrea.h... no
checking for inttypes.h... (cached) yes
checking limits usability... yes
checking limits presence... yes
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checking limits.h usability... yes
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checking for unistd.h... (cached) yes
checking windows.h usability... no
checking windows.h presence... no
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checking for wstring... yes
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checking atomic.h usability... no
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checking dlfcn.h usability... yes
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checking x86intrin.h usability... no
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checking arpa/inet.h usability... yes
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checking errno.h usability... yes
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checking malloc.h usability... yes
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checking netinet/in.h usability... yes
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checking netinet/tcp.h usability... yes
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checking signal.h usability... yes
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checking sys/ioctl.h usability... yes
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checking for getlogin_r... yes
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checking return type of signal handlers... void
checking whether select updates the timeout when interrupted... yes
checking whether strcasecmp treats letters as lowercase... yes
checking for Linux-like sysinfo with 1 arg... yes
checking for getloadavg... yes
checking for readdir_r... 3
checking for an ANSI C-conforming const... yes
checking whether byte ordering is bigendian... no
checking whether char is unsigned... yes
checking for char... yes
checking size of char... 1
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checking size of double... 8
checking for float... yes
checking size of float... 4
checking for int... yes
checking size of int... 4
checking for long... yes
checking size of long... 4
checking for long double... yes
checking size of long double... 8
checking for long long... yes
checking size of long long... 8
checking for short... yes
checking size of short... 2
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checking size of __int64... 0
checking for intptr_t... yes
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checking whether function prototypes can use throw(...)... yes
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checking for SysV semaphores... yes
checking for union semun... no
checking which way the stack grows... up
checking whether the preprocessor supports C99-style variadic macros... yes
checking whether the preprocessor supports GNU-style variadic macros... yes
checking syntax for marking deprecated functions... __attribute__((__deprecated__))
checking how to force inlining... inline __attribute__((always_inline))
checking whether the C compiler supports __attribute__((destructor))... yes
checking whether /usr/bin/gcc -std=gnu11 -fgnu89-inline supports __attribute__((visibility("default")))... (cached) unnecessary
checking whether the C compiler supports C99 restrict... __restrict__
checking whether the C++ compiler supports C99 restrict... __restrict__
checking syntax for marking functions that never return... __attribute__((__noreturn__))
checking syntax for marking functions whose result should be checked... __attribute__((warn_unused_result))
checking syntax for declaring thread-local variables... __thread
checking syntax for marking types as packed to save memory... __attribute__((__packed__))
checking whether FIONBIO requires BSD_COMP to be defined... no
checking whether INADDR_NONE is defined... yes
checking whether unaligned reads are permissible... yes
checking whether /usr/bin/gcc -std=gnu11 -fgnu89-inline supports SIMD vector arithmetic... yes
checking whether /usr/bin/gcc -std=gnu11 -fgnu89-inline supports -funsafe-math-optimizations... yes
checking whether /usr/bin/gcc -std=gnu11 -fgnu89-inline supports -msse4.1... no
checking whether /usr/bin/gcc -std=gnu11 -fgnu89-inline supports -maes... no
checking whether /usr/bin/gcc -std=gnu11 -fgnu89-inline supports -fdiagnostics-color=always... yes
checking whether in-house NCBI resources are available... no
checking for gethostbyname in -lnsl... yes
checking for connect in -lsocket... no
checking for res_search in -lresolv... yes
checking for inet_ntoa_r... no
checking for getaddrinfo... yes
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checking for getipnodebyaddr... no
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checking for library containing setkey... -lcrypt
checking for library containing dlopen... -ldl
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checking for library containing iconv... none required
checking for iconv declaration...
extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft);
checking for libz... yes
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checking for usable Perl libraries... no
checking Boost version... 1_62
checking for Boost library name tag... -gcc70-mt-1_62 (autodetected)
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config.status: executing default commands
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/corelib/ncbicfg.c is updated
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc/common/ncbi_build_ver.h is updated
make[2]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/helpers'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/helpers TMPL=run_with_lock -kw all
make[3]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/helpers'
gcc -c -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIE /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/helpers/run_with_lock.c -o run_with_lock.o
gcc -Wl,-rpath,/usr/lib/ncbi-blast+ -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -fPIE -pie run_with_lock.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lm -lpthread -o run_with_lock
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f run_with_lock /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f run_with_lock /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/run_with_lock
make[3]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/helpers'
make[2]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/helpers'
Platform not defined for Linux armv8l -- please fix me
project_tree_builder is not found at /net/snowman/vol/export2/win-coremake/App/Ncbi/cppcore/ptb/UNKNOWN/4.2.1/project_tree_builder
Will build project_tree_builder locally
**********************************************************************
Building project_tree_builder
**********************************************************************
make[2]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[3]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
/usr/bin/make[4] (Makefile.precompile): Nothing to be done for `all'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
/usr/bin/make[3] (Makefile.corelib.lib): Nothing to be done for `export-headers'.
/usr/bin/make[3] (Makefile.test_mt.lib): Nothing to be done for `export-headers'.
/usr/bin/make[3] (Makefile.test_boost.lib): Nothing to be done for `export-headers'.
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib TMPL=corelib -w all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_os_unix.cpp:34:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/blob_storage.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/blob_storage.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ddumpable.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ddumpable.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/env_reg.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/env_reg.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/metareg.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:69:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/metareg.cpp:35:
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ncbi::CMetaRegistry::SEntry&}; _Tp = ncbi::CMetaRegistry::SEntry; _Alloc = std::allocator<ncbi::CMetaRegistry::SEntry>]':
/usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector<ncbi::CMetaRegistry::SEntry>::iterator {aka __gnu_cxx::__normal_iterator<ncbi::CMetaRegistry::SEntry*, std::vector<ncbi::CMetaRegistry::SEntry> >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:64:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/metareg.cpp:35:
/usr/include/c++/7/bits/stl_vector.h: In member function 'const ncbi::CMetaRegistry::SEntry& ncbi::CMetaRegistry::x_Load(const string&, ncbi::CMetaRegistry::ENameStyle, ncbi::CMetaRegistry::TFlags, ncbi::IRegistry::TFlags, ncbi::IRWRegistry*, const string&, ncbi::CMetaRegistry::ENameStyle, ncbi::CMetaRegistry::SEntry&, const string&)':
/usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CMetaRegistry::SEntry*, std::vector<ncbi::CMetaRegistry::SEntry> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_config.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_os_unix.cpp -o ncbi_os_unix.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/blob_storage.cpp -o blob_storage.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ddumpable.cpp -o ddumpable.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/env_reg.cpp -o env_reg.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/metareg.cpp -o metareg.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_config.cpp -o ncbi_config.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MTIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_param.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_process.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_safe_static.hpp:48,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_safe_static.cpp:38:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_signal.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_signal.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_stack.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_system.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbiapp.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_param.cpp -o ncbi_param.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_process.cpp -o ncbi_process.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_safe_static.cpp -o ncbi_safe_static.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_signal.cpp -o ncbi_signal.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_stack.cpp -o ncbi_stack.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_system.cpp -o ncbi_system.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbiapp.cpp -o ncbiapp.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-sIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbiargs.cpp:38:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbiargs.cpp: In function 'std::__cxx11::string ncbi::s_CArgs_ReadFromConsole(const string&, ncbi::EEchoInput, const char*)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbiargs.cpp:2058:18: warning: ignoring return value of 'ssize_t write(int, const void*, size_t)', declared with attribute warn_unused_result [-Wunused-result]
write( tty, prompt.data(), prompt.length());
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbiargs.cpp:2087:18: warning: ignoring return value of 'ssize_t write(int, const void*, size_t)', declared with attribute warn_unused_result [-Wunused-result]
write( tty, thx.data(), thx.length());
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbiatomic.cpp:45:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_safe_static.hpp:48,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbidbg.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_process.hpp:44:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp: In static member function 'static void ncbi::CDiagContext::sx_ThreadDataTlsCleanup(ncbi::CDiagContextThreadData*, void*)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:854:67: warning: 'ncbi::CDiagContextThreadData::TProperties* ncbi::CDiagContextThreadData::GetProperties(ncbi::CDiagContextThreadData::EGetProperties)' is deprecated [-Wdeprecated-declarations]
value->GetProperties(CDiagContextThreadData::eProp_Get); /* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:1810:34: note: declared here
NCBI_DEPRECATED TProperties* GetProperties(EGetProperties flag);
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp: In member function 'void ncbi::CDiagContext::SetProperty(const string&, const string&, ncbi::CDiagContext::EPropertyMode)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:1824:49: warning: 'ncbi::CDiagContextThreadData::TProperties* ncbi::CDiagContextThreadData::GetProperties(ncbi::CDiagContextThreadData::EGetProperties)' is deprecated [-Wdeprecated-declarations]
CDiagContextThreadData::eProp_Create); /* NCBI_FAKE_WARNING */
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:984:1: note: declared here
CDiagContextThreadData::GetProperties(EGetProperties flag)
^~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp: In member function 'std::__cxx11::string ncbi::CDiagContext::GetProperty(const string&, ncbi::CDiagContext::EPropertyMode) const':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:1887:46: warning: 'ncbi::CDiagContextThreadData::TProperties* ncbi::CDiagContextThreadData::GetProperties(ncbi::CDiagContextThreadData::EGetProperties)' is deprecated [-Wdeprecated-declarations]
CDiagContextThreadData::eProp_Get); /* NCBI_FAKE_WARNING */
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:984:1: note: declared here
CDiagContextThreadData::GetProperties(EGetProperties flag)
^~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp: In member function 'void ncbi::CDiagContext::DeleteProperty(const string&, ncbi::CDiagContext::EPropertyMode)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:1912:46: warning: 'ncbi::CDiagContextThreadData::TProperties* ncbi::CDiagContextThreadData::GetProperties(ncbi::CDiagContextThreadData::EGetProperties)' is deprecated [-Wdeprecated-declarations]
CDiagContextThreadData::eProp_Get); /* NCBI_FAKE_WARNING */
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:984:1: note: declared here
CDiagContextThreadData::GetProperties(EGetProperties flag)
^~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp: In member function 'void ncbi::CDiagContext::PrintProperties()':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:1944:46: warning: 'ncbi::CDiagContextThreadData::TProperties* ncbi::CDiagContextThreadData::GetProperties(ncbi::CDiagContextThreadData::EGetProperties)' is deprecated [-Wdeprecated-declarations]
CDiagContextThreadData::eProp_Get); /* NCBI_FAKE_WARNING */
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:984:1: note: declared here
CDiagContextThreadData::GetProperties(EGetProperties flag)
^~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp: In static member function 'static void ncbi::CDiagContext::SetupDiag(ncbi::EAppDiagStream, ncbi::CNcbiRegistry*, ncbi::EDiagCollectMessages, const char*)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:3244:48: warning: 'virtual bool ncbi::CNcbiApplication::SetupDiag_AppSpecific()' is deprecated [-Wdeprecated-declarations]
app->SetupDiag_AppSpecific(); /* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:48,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:362:34: note: declared here
NCBI_DEPRECATED virtual bool SetupDiag_AppSpecific(void);
^~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag_p.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag_p.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidll.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbidll.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
trong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbiargs.cpp -o ncbiargs.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbiatomic.cpp -o ncbiatomic.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include ncbicfg.c -o ncbicfg.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbidbg.cpp -o ncbidbg.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp -o ncbidiag.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag_p.cpp -o ncbidiag_p.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbidll.cpp -o ncbidll.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbienv.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_process.hpp:44:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexec.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbiexec.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbiexpt.cpp:41:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbifile.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimempool.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbimempool.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbimtx.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbiobj.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbienv.cpp -o ncbienv.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbiexec.cpp -o ncbiexec.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbiexpt.cpp -o ncbiexpt.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbifile.cpp -o ncbifile.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbimempool.cpp -o ncbimempool.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbimtx.cpp -o ncbimtx.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbiobj.cpp -o ncbiobj.o
/In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbireg.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbistr.cpp:35:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbistre.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbithr.cpp:45:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbithr.cpp: In static member function 'static bool ncbi::CThread::IsMain()':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbithr.cpp:516:9: warning: variable 'id' set but not used [-Wunused-but-set-variable]
TID id = sx_ThreadId;
^~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbitime.cpp:32:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/obj_store.hpp:33,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/obj_store.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbireg.cpp -o ncbireg.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbistr.cpp -o ncbistr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbistre.cpp -o ncbistre.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbithr.cpp -o ncbithr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbitime.cpp -o ncbitime.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/obj_store.cpp -o obj_store.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-bIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/plugin_manager.hpp:70,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/plugin_manager.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/plugin_manager.hpp:70,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/plugin_manager_store.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/plugin_manager_store.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/stream_utils.cpp:42:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/syslog.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/syslog.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/version.cpp:516:12: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
: date(__DATE__ " " __TIME__)
^~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/version.cpp:516:25: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time]
: date(__DATE__ " " __TIME__)
^~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/version.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/version.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/request_ctx.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/request_ctx.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
last+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/plugin_manager.cpp -o plugin_manager.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/plugin_manager_store.cpp -o plugin_manager_store.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/rwstreambuf.cpp -o rwstreambuf.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/stream_utils.cpp -o stream_utils.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/syslog.cpp -o syslog.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/version.cpp -o version.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/request_ctx.cpp -o request_ctx.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/request_control.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/expr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/expr.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/expr.cpp:36:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/expr.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/expr.hpp:383:14: warning: mangled name for 'ncbi::CExprSymbol* ncbi::CExprParser::AddSymbol(const char*, VT) [with VT = double (*)(double, double) throw ()]' will change in C++17 because the exception specification is part of a function type [-Wnoexcept-type]
CExprSymbol* CExprParser::AddSymbol(const char* name, VT value)
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/expr.hpp:383:14: warning: mangled name for 'ncbi::CExprSymbol* ncbi::CExprParser::AddSymbol(const char*, VT) [with VT = double (*)(double) throw ()]' will change in C++17 because the exception specification is part of a function type [-Wnoexcept-type]
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/resource_info.cpp:38:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/interprocess_lock.cpp:32:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_autoinit.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_autoinit.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/perf_log.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/perf_log.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/request_control.cpp -o request_control.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/expr.cpp -o expr.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_strings.c -o ncbi_strings.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/resource_info.cpp -o resource_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/interprocess_lock.cpp -o interprocess_lock.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_autoinit.cpp -o ncbi_autoinit.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/perf_log.cpp -o perf_log.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/nIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_toolkit.cpp:31:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbierror.cpp:31:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_url.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_url.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_cookies.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_cookies.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_message.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_message.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_toolkit.cpp -o ncbi_toolkit.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbierror.cpp -o ncbierror.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_url.cpp -o ncbi_url.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_cookies.cpp -o ncbi_cookies.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/guard.cpp -o guard.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_message.cpp -o ncbi_message.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/request_status.cpp -o request_status.o
/bin/rm -f libxncbi.so .libxncbi.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxncbi.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC ncbi_os_unix.o blob_storage.o ddumpable.o env_reg.o metareg.o ncbi_config.o ncbi_param.o ncbi_process.o ncbi_safe_static.o ncbi_signal.o ncbi_stack.o ncbi_system.o ncbiapp.o ncbiargs.o ncbiatomic.o ncbicfg.o ncbidbg.o ncbidiag.o ncbidiag_p.o ncbidll.o ncbienv.o ncbiexec.o ncbiexpt.o ncbifile.o ncbimempool.o ncbimtx.o ncbiobj.o ncbireg.o ncbistr.o ncbistre.o ncbithr.o ncbitime.o obj_store.o plugin_manager.o plugin_manager_store.o rwstreambuf.o stream_utils.o syslog.o version.o request_ctx.o request_control.o expr.o ncbi_strings.o resource_info.o interprocess_lock.o ncbi_autoinit.o perf_log.o ncbi_toolkit.o ncbierror.o ncbi_url.o ncbi_cookies.o guard.o ncbi_message.o request_status.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -ldl -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxncbi.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxncbi.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libxncbi.so
/bin/ln -f .xncbi.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.xncbi.dep
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib TMPL=test_mt -w all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_mt.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/test_mt.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/test_mt.cpp -o test_mt.o
/bin/rm -f libtest_mt.so .libtest_mt.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libtest_mt.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC test_mt.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtest_mt.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libtest_mt.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libtest_mt.so
/bin/ln -f .test_mt.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.test_mt.dep
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib TMPL=test_boost -w all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/test_boost.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/test_boost.cpp -o test_boost.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/corelib/teamcity_messages.cpp -o teamcity_messages.o
/bin/rm -f libtest_boost.so .libtest_boost.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libtest_boost.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC test_boost.o teamcity_messages.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtest_boost.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libtest_boost.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libtest_boost.so
/bin/ln -f .test_boost.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.test_boost.dep
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[3]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[2]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[2]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util'
/usr/bin/make[2] (Makefile.util.lib): Nothing to be done for `export-headers'.
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util TMPL=util -w all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/random_gen.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/random_gen.cpp:75:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/utf8.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/utf8.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/checksum.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/bytesrc.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/strbuffer.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/strbuffer.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/itree.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[3]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/random_gen.cpp -o random_gen.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/utf8.cpp -o utf8.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/checksum.cpp -o checksum.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/bytesrc.cpp -o bytesrc.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/strbuffer.cpp -o strbuffer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/itree.cpp -o itree.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/nIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/smalldns.cpp:34:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/thread_pool_old.hpp:45,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/thread_pool.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/thread_pool_old.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/ddump_viewer.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/strsearch.hpp:45,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/strsearch.cpp:38:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/logrotate.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/logrotate.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/format_guess.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/format_guess.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/ascii85.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/ascii85.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/smalldns.cpp -o smalldns.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/thread_pool_old.cpp -o thread_pool_old.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/ddump_viewer.cpp -o ddump_viewer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/strsearch.cpp -o strsearch.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/logrotate.cpp -o logrotate.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/format_guess.cpp -o format_guess.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/ascii85.cpp -o ascii85.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITSIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/md5.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/md5.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/file_obsolete.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/file_obsolete.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/unicode.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/unicode.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/dictionary.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/dictionary.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/static_set.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/static_map.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/dictionary_util.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/dictionary_util.cpp: In static member function 'static void ncbi::CDictionaryUtil::Stem(const string&, std::__cxx11::string*)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/dictionary_util.cpp:709:17: warning: array subscript is below array bounds [-Warray-bounds]
const char* end2 = p - 1;
^~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/dictionary_util.cpp:709:17: warning: array subscript is below array bounds [-Warray-bounds]
const char* end2 = p - 1;
^~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/dictionary_util.cpp:709:17: warning: array subscript is below array bounds [-Warray-bounds]
const char* end2 = p - 1;
^~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/dictionary_util.cpp:709:17: warning: array subscript is below array bounds [-Warray-bounds]
const char* end2 = p - 1;
^~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/dictionary_util.cpp:709:17: warning: array subscript is below array bounds [-Warray-bounds]
const char* end2 = p - 1;
^~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/dictionary_util.cpp:709:17: warning: array subscript is below array bounds [-Warray-bounds]
const char* end2 = p - 1;
^~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/dictionary_util.cpp:709:17: warning: array subscript is below array bounds [-Warray-bounds]
const char* end2 = p - 1;
^~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/dictionary_util.cpp:709:17: warning: array subscript is below array bounds [-Warray-bounds]
const char* end2 = p - 1;
^~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/dictionary_util.cpp:709:17: warning: array subscript is below array bounds [-Warray-bounds]
const char* end2 = p - 1;
^~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/thread_nonstop.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/thread_nonstop.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/sgml_entity.hpp:34,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/sgml_entity.cpp:32:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/md5.cpp -o md5.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/file_obsolete.cpp -o file_obsolete.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/unicode.cpp -o unicode.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/dictionary.cpp -o dictionary.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/dictionary_util.cpp -o dictionary_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/thread_nonstop.cpp -o thread_nonstop.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/sgml_entity.cpp -o sgml_entity.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/static_set.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/static_set.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/transmissionrw.cpp:35:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/mutex_pool.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/mutex_pool.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/ncbi_cache.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/ncbi_cache.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/line_reader.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/line_reader.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/ncbi_table.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/util_exception.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/static_set.cpp -o static_set.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/transmissionrw.cpp -o transmissionrw.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/miscmath.c -o miscmath.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/mutex_pool.cpp -o mutex_pool.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/ncbi_cache.cpp -o ncbi_cache.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/line_reader.cpp -o line_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/util_exception.cpp -o util_exception.o
/usr/bin/g++ -stdIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/multi_writer.cpp:32:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/itransaction.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/itransaction.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/thread_pool_old.hpp:45,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/thread_pool.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/thread_pool.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/thread_pool_old.hpp:45,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/thread_pool.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/thread_pool_ctrl.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/thread_pool_ctrl.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/scheduler.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/uttp.cpp -o uttp.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/multi_writer.cpp -o multi_writer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/itransaction.cpp -o itransaction.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/thread_pool.cpp -o thread_pool.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/thread_pool_ctrl.cpp -o thread_pool_ctrl.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/scheduler.cpp -o scheduler.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/rangelist.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/distribution.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/distribution.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/rangelist.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/rangelist.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/util_misc.hpp:33,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/util_misc.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/bits/stl_algo.h:61:0,
from /usr/include/c++/7/algorithm:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbictype.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistre.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_stack.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/histogram_binning.cpp:38:
/usr/include/c++/7/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long int, unsigned int>*, std::vector<std::pair<long long int, unsigned int> > >; _Distance = int; _Tp = std::pair<long long int, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<ncbi::{anonymous}::CReverseSort<std::pair<long long int, unsigned int> > >]':
/usr/include/c++/7/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, unsigned int>*, std::vector<std::pair<long long int, unsigned int> > >' changed in GCC 7.1
__adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
^~~~~~~~~~~~~
In file included from /usr/include/c++/7/algorithm:62:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbictype.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistre.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_stack.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/histogram_binning.cpp:38:
/usr/include/c++/7/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long int, unsigned int>*, std::vector<std::pair<long long int, unsigned int> > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<ncbi::{anonymous}::CReverseSort<std::pair<long long int, unsigned int> > >]':
/usr/include/c++/7/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, unsigned int>*, std::vector<std::pair<long long int, unsigned int> > >' changed in GCC 7.1
__unguarded_linear_insert(_RandomAccessIterator __last,
^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long int, unsigned int>*, std::vector<std::pair<long long int, unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<ncbi::{anonymous}::CReverseSort<std::pair<long long int, unsigned int> > >]':
/usr/include/c++/7/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, unsigned int>*, std::vector<std::pair<long long int, unsigned int> > >' changed in GCC 7.1
__insertion_sort(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, unsigned int>*, std::vector<std::pair<long long int, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long int, unsigned int>*, std::vector<std::pair<long long int, unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<ncbi::{anonymous}::CReverseSort<std::pair<long long int, unsigned int> > >]':
/usr/include/c++/7/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, unsigned int>*, std::vector<std::pair<long long int, unsigned int> > >' changed in GCC 7.1
__introsort_loop(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, unsigned int>*, std::vector<std::pair<long long int, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, unsigned int>*, std::vector<std::pair<long long int, unsigned int> > >' changed in GCC 7.1
std::__introsort_loop(__cut, __last, __depth_limit, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:69:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/histogram_binning.cpp:38:
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ncbi::CHistogramBinning::SBin&}; _Tp = ncbi::CHistogramBinning::SBin; _Alloc = std::allocator<ncbi::CHistogramBinning::SBin>]':
/usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector<ncbi::CHistogramBinning::SBin>::iterator {aka __gnu_cxx::__normal_iterator<ncbi::CHistogramBinning::SBin*, std::vector<ncbi::CHistogramBinning::SBin> >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {ncbi::CHistogramBinning::SBin}; _Tp = ncbi::CHistogramBinning::SBin; _Alloc = std::allocator<ncbi::CHistogramBinning::SBin>]':
/usr/include/c++/7/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CHistogramBinning::SBin*, std::vector<ncbi::CHistogramBinning::SBin> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:64:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/histogram_binning.cpp:38:
/usr/include/c++/7/bits/stl_vector.h: In member function 'ncbi::CHistogramBinning::TListOfBins* ncbi::CHistogramBinning::x_TryForEvenBins() const':
/usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CHistogramBinning::SBin*, std::vector<ncbi::CHistogramBinning::SBin> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CHistogramBinning::SBin*, std::vector<ncbi::CHistogramBinning::SBin> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:69:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/histogram_binning.cpp:38:
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long int, unsigned int>}; _Tp = std::pair<long long int, unsigned int>; _Alloc = std::allocator<std::pair<long long int, unsigned int> >]':
/usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector<std::pair<long long int, unsigned int> >::iterator {aka __gnu_cxx::__normal_iterator<std::pair<long long int, unsigned int>*, std::vector<std::pair<long long int, unsigned int> > >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector<std::pair<long long int, unsigned int> >::iterator {aka __gnu_cxx::__normal_iterator<std::pair<long long int, unsigned int>*, std::vector<std::pair<long long int, unsigned int> > >}' changed in GCC 7.1
/usr/include/c++/7/bits/vector.tcc: In member function 'ncbi::CHistogramBinning::TListOfBins* ncbi::CHistogramBinning::x_IdentifyClusters() const':
/usr/include/c++/7/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, unsigned int>*, std::vector<std::pair<long long int, unsigned int> > >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/algorithm:62:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbictype.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistre.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_stack.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/histogram_binning.cpp:38:
/usr/include/c++/7/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, unsigned int>*, std::vector<std::pair<long long int, unsigned int> > >' changed in GCC 7.1
std::__introsort_loop(__first, __last,
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
std::__lg(__last - __first) * 2,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__comp);
~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, unsigned int>*, std::vector<std::pair<long long int, unsigned int> > >' changed in GCC 7.1
std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, unsigned int>*, std::vector<std::pair<long long int, unsigned int> > >' changed in GCC 7.1
std::__insertion_sort(__first, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/table_printer.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/table_printer.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_url.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_cookies.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/retry_ctx.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/stream_source.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/distribution.cpp -o distribution.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/rangelist.cpp -o rangelist.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/util_misc.cpp -o util_misc.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/histogram_binning.cpp -o histogram_binning.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/table_printer.cpp -o table_printer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/retry_ctx.cpp -o retry_ctx.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/stream_source.cpp -o stream_source.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/file_manifest.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
OURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/file_manifest.cpp -o file_manifest.o
/bin/rm -f libxutil.so .libxutil.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxutil.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC random_gen.o utf8.o checksum.o bytesrc.o strbuffer.o itree.o smalldns.o thread_pool_old.o ddump_viewer.o strsearch.o logrotate.o format_guess.o ascii85.o md5.o file_obsolete.o unicode.o dictionary.o dictionary_util.o thread_nonstop.o sgml_entity.o static_set.o transmissionrw.o miscmath.o mutex_pool.o ncbi_cache.o line_reader.o util_exception.o uttp.o multi_writer.o itransaction.o thread_pool.o thread_pool_ctrl.o scheduler.o distribution.o rangelist.o util_misc.o histogram_binning.o table_printer.o retry_ctx.o stream_source.o file_manifest.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxutil.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxutil.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libxutil.so
/bin/ln -f .xutil.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.xutil.dep
make[3]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util'
make[2]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util'
make[2]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/regexp'
NOTE: Skipping project regexp due to unmet requirements:
LocalPCRE
make[3]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/regexp'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/regexp TMPL=regexp -w mark-as-disabled
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/regexp'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/regexp'
make[3]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/regexp'
make[2]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/regexp'
make[2]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
make[3]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
/usr/bin/make[3] (Makefile.xregexp.lib): Nothing to be done for `export-headers'.
/usr/bin/make[3] (Makefile.xregexp_template_tester.lib): Nothing to be done for `export-headers'.
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/xregexp TMPL=xregexp -w all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/xregexp/regexp.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/xregexp/regexp.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/xregexp/arg_regexp.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/xregexp/arg_regexp.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/xregexp/mask_regexp.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/xregexp/mask_regexp.cpp:31:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/xregexp/regexp.cpp -o regexp.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/xregexp/arg_regexp.cpp -o arg_regexp.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/xregexp/mask_regexp.cpp -o mask_regexp.o
/bin/rm -f libxregexp.so .libxregexp.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxregexp.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC regexp.o arg_regexp.o mask_regexp.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lxncbi -lpcre
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxregexp.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxregexp.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libxregexp.so
/bin/ln -f .xregexp.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.xregexp.dep
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/xregexp TMPL=xregexp_template_tester -w all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/xregexp/regexp_template_tester.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/xregexp/regexp_template_tester.cpp -o regexp_template_tester.o
/bin/rm -f libxregexp_template_tester.so .libxregexp_template_tester.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxregexp_template_tester.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC regexp_template_tester.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lxregexp -lxncbi -lpcre
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxregexp_template_tester.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxregexp_template_tester.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libxregexp_template_tester.so
/bin/ln -f .xregexp_template_tester.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.xregexp_template_tester.dep
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
make[3]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
make[2]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
make[2]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/project_tree_builder'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder TMPL=project_tree_builder -w all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_utils.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/file_contents.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/file_contents.cpp:31:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_site.hpp:31,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_configure.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_configure.cpp:31:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_makefile.hpp:31,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_makefile.cpp:32:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_item.hpp:34,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_generator.hpp:33,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_masterproject_generator.cpp:31:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_item.hpp:34,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_generator.hpp:33,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_generator.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_utils.cpp:31:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[3]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/project_tree_builder'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/file_contents.cpp -o file_contents.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_configure.cpp -o msvc_configure.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_makefile.cpp -o msvc_makefile.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_masterproject_generator.cpp -o msvc_masterproject_generator.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_generator.cpp -o msvc_prj_generator.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_utils.cpp -o msvc_prj_utils.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blaIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_item.hpp:34,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_project_context.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_project_context.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_site.hpp:31,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_site.cpp:32:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_item.hpp:34,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_project_context.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_sln_generator.hpp:34,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_sln_generator.cpp:32:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_builder_app.hpp:33,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_builder_app.cpp:31:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_datatool_generated_src.hpp:33,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_datatool_generated_src.cpp:31:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_item.cpp:31:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
st+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_project_context.cpp -o msvc_project_context.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_site.cpp -o msvc_site.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_sln_generator.cpp -o msvc_sln_generator.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_builder_app.cpp -o proj_builder_app.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_datatool_generated_src.cpp -o proj_datatool_generated_src.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_item.cpp -o proj_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_item.hpp:34,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_tree.hpp:34,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_tree.cpp:31:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_item.hpp:34,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_tree_builder.hpp:33,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_tree_builder.cpp:31:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_utils.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/file_contents.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/resolver.hpp:34,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_src_resolver.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_src_resolver.cpp:31:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_utils.cpp:31:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_utils.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/file_contents.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/resolver.hpp:34,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/resolver.cpp:31:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_item.hpp:34,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_generator.hpp:33,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_configure_prj_generator.cpp:31:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_tree.cpp -o proj_tree.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_tree_builder.cpp -o proj_tree_builder.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_src_resolver.cpp -o proj_src_resolver.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_utils.cpp -o proj_utils.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/resolver.cpp -o resolver.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_configure_prj_generator.cpp -o msvc_configure_prj_generator.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_projeIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_projects.hpp:34,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_projects.cpp:30:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_dlls_info.hpp:33,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_dlls_info.cpp:31:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_item.hpp:34,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_project_context.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_files_collector.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_files_collector.cpp:32:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/configurable_file.hpp:33,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/configurable_file.cpp:31:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_builder_app.hpp:33,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_gui.cpp:31:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.cpp:31:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.hpp:33,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_utils.hpp:33,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_item.hpp:34,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/mac_prj_generator.hpp:33,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/mac_prj_generator.cpp:32:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cts.cpp -o proj_projects.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_dlls_info.cpp -o msvc_dlls_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_files_collector.cpp -o msvc_prj_files_collector.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/configurable_file.cpp -o configurable_file.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_gui.cpp -o ptb_gui.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.cpp -o ptb_registry.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/mac_prj_generator.cpp -o mac_prj_generator.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -WerrIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_builder_app.hpp:33,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/prj_file_collector.cpp:32:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
or=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/prj_file_collector.cpp -o prj_file_collector.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie file_contents.o msvc_configure.o msvc_makefile.o msvc_masterproject_generator.o msvc_prj_generator.o msvc_prj_utils.o msvc_project_context.o msvc_site.o msvc_sln_generator.o proj_builder_app.o proj_datatool_generated_src.o proj_item.o proj_tree.o proj_tree_builder.o proj_src_resolver.o proj_utils.o resolver.o msvc_configure_prj_generator.o proj_projects.o msvc_dlls_info.o msvc_prj_files_collector.o configurable_file.o ptb_gui.o ptb_registry.o mac_prj_generator.o prj_file_collector.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lxutil -lxncbi -lxregexp -lpcre -ldl -lm -lpthread -o project_tree_builder
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f project_tree_builder /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f project_tree_builder /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/project_tree_builder
make[3]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/project_tree_builder'
make[2]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/project_tree_builder'
**********************************************************************
Running project_tree_builder. Please wait.
**********************************************************************
./build-system/project_tree_builder/project_tree_builder -dll -dtdep -conffile /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder.ini -logfile Flat.configuration_log /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ src Makefile.flat
Done
===============================================================================
NCBI C++ Toolkit documentation:
Online: http://www.ncbi.nlm.nih.gov/toolkit/doc/book/
Local: ./doc/public/index.html
For the available configuration flags run: ./configure --help
CFLAGS = -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC
CXXFLAGS = -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC
CPPFLAGS = -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE
LDFLAGS = -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O
LIBRARIES: build as dynamic by default
FEATURES: GCC MT LFS DLL DLL_BUILD unix WinMain Linux
PACKAGES:
enabled: Iconv Z BZ2 PCRE MBEDTLS GMP GMP NETTLE NETTLE GNUTLS Boost.Spirit Boost.Test.Included LMDB LocalLMDB
disabled: UUID FUSE LIBUNWIND LocalZ LocalBZ2 LZO LocalPCRE GCRYPT OPENSSL KRB5 CURL Sybase DBLib FreeTDS MySQL BerkeleyDB BerkeleyDB++ ODBC PYTHON PYTHON25 PYTHON26 PYTHON27 PYTHON3 PERL Boost.Filesystem Boost.Iostreams Boost.Program-Options Boost.Regex Boost.System Boost.Test Boost.Thread C-Toolkit OpenGL MESA GLUT GLEW wxWidgets wx2.8 Fast-CGI LocalSSS LocalMSGMAIL2 SSSUTILS LocalNCBILS NCBILS2 SSSDB SP ORBacus ICU EXPAT SABLOT LIBXML LIBXSLT LIBEXSLT Xerces Xalan Zorba SQLITE3 SQLITE3ASYNC VDB OECHEM SGE MUPARSER HDF5 JPEG PNG TIFF GIF UNGIF XPM FreeType FTGL MAGIC MIMETIC GSOAP AVRO Cereal SASL2 MONGODB MONGODB3 GMOCK LAPACK LIBUV LIBSSH2 CASSANDRA LIBXLSXWRITER GRPC
PROJECTS:
enabled: cgi serial objects app algo
disabled: local_lbsm connext ncbi_crypt bdb dbapi ctools gui gbench
Tools / flags / paths: /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.mk
Configuration header: /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc/ncbiconf_unix.h
To build everything: cd /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build && /usr/bin/make all_r
or simply run /usr/bin/make in the current directory
Alternatively, cd /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build && /usr/bin/make -f Makefile.flat
******* CONFIGURATION SUCCESSFUL *******
make[1]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1'
debian/rules override_dh_auto_build-arch
make[1]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1'
cd c++/BUILD/build && \
make -j4 -f Makefile.flat all_projects="algo/blast/ app/ objmgr/ objtools/align_format/ objtools/blast/"
make[2]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build'
/usr/bin/make -w -j --jobserver-fds=3,4 -f Makefile.flat ptb_all.real MTARGET=
make[3]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build'
cd corelib/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
cd util/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
cd serial/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
cd serial/datatool/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/serial'
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util'
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/serial/datatool'
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/serial/datatool'
cd algo/blast/composition_adjustment/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment'
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
/usr/bin/make[4] (Makefile.serial.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util'
cd util/tables/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables'
/usr/bin/make[4] (Makefile.composition_adjustment.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment'
cd connect/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
/usr/bin/make[4] (Makefile.cserial.lib): Nothing to be done for `export-headers'.
/usr/bin/make[5] (Makefile.precompile): Nothing to be done for `all'.
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
/usr/bin/make[4] (Makefile.tables.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables'
cd algo/blast/core/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core'
/usr/bin/make[4] (Makefile.connssl.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.corelib.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.blast.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core'
cd util/sequtil/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/serial'
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil'
cd objtools/blast/services/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
/usr/bin/make[4] (Makefile.connect.lib): Nothing to be done for `export-headers'.
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services'
/usr/bin/make[4] (Makefile.test_mt.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.xxconnect.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.test_boost.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.sequtil.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil'
cd util/creaders/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
/usr/bin/make[4] (Makefile.blast_services.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services'
cd objmgr/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders'
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr'
/usr/bin/make[4] (Makefile.xconnect.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.creaders.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders'
cd objtools/blast/seqdb_reader/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
/usr/bin/make[4] (Makefile.objmgr.lib): Nothing to be done for `export-headers'.
cd objtools/readers/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr'
cd objmgr/util/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers'
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util'
/usr/bin/make[4] (Makefile.xthrserv.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.seqdb.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader'
cd objtools/seqmasks_io/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io'
/usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.xobjread.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util'
cd algo/blast/dbindex/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex'
/usr/bin/make[4] (Makefile.xobjreadex.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.seqmasks_io.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io'
cd algo/dustmask/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask'
/usr/bin/make[4] (Makefile.xalgoblastdbindex.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex'
cd algo/winmask/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
cd objtools/alnmgr/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask'
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers'
cd algo/blast/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api'
/usr/bin/make[4] (Makefile.xalgodustmask.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask'
cd objtools/blast/gene_info_reader/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader'
/usr/bin/make[4] (Makefile.xalgowinmask.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask'
cd util/compress/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
/usr/bin/make[4] (Makefile.alnmgr.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr'
cd objtools/data_loaders/genbank/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api'
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
/usr/bin/make[4] (Makefile.xblast.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api'
cd objtools/data_loaders/genbank/cache/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache'
/usr/bin/make[4] (Makefile.gene_info.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader'
cd objtools/data_loaders/genbank/id1/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1'
/usr/bin/make[4] (Makefile.compress.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api'
cd objtools/data_loaders/genbank/id2/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2'
/usr/bin/make[4] (Makefile.ncbi_xreader.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.ncbi_xreader_cache.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache'
cd cgi/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/cgi'
/usr/bin/make[4] (Makefile.ncbi_xloader_genbank.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.ncbi_xreader_id1.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1'
cd html/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/html'
/usr/bin/make[4] (Makefile.ncbi_xreader_id2.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2'
cd objtools/align_format/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format'
/usr/bin/make[4] (Makefile.cgi.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
cd objtools/blast/blastdb_format/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format'
/usr/bin/make[4] (Makefile.html.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/html'
cd objtools/data_loaders/blastdb/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
/usr/bin/make[4] (Makefile.align_format.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format'
cd algo/blast/blastinput/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput'
/usr/bin/make[4] (Makefile.fcgi.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.blastdb_format.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format'
cd algo/blast/proteinkmer/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer'
/usr/bin/make[4] (Makefile.ncbi_xloader_blastdb.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.blastinput.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput'
cd util/xregexp/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/cgi'
cd objtools/cleanup/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup'
/usr/bin/make[4] (Makefile.ncbi_xloader_blastdb_rmt.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.proteinkmer.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer'
cd objtools/format/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format'
/usr/bin/make[4] (Makefile.xregexp.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
cd algo/blast/format/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format'
/usr/bin/make[4] (Makefile.cleanup.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup'
cd algo/blast/blastinput/unit_test/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput/unit_test'
/usr/bin/make[4] (Makefile.xformat.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format'
cd algo/blast/dbindex/makeindex/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput/unit_test'
/usr/bin/make[4] (Makefile.xregexp_template_tester.lib): Nothing to be done for `export-headers'.
cd algo/blast/igblast/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex/makeindex'
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast'
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex/makeindex'
cd objtools/simple/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple'
/usr/bin/make[4] (Makefile.xblastformat.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format'
cd algo/blast/proteinkmer/unit_test/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer/unit_test'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer/unit_test'
cd algo/blast/unit_tests/blast_format/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blast_format'
/usr/bin/make[4] (Makefile.igblast.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast'
cd algo/blast/unit_tests/blastdb/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blast_format'
cd objtools/blast/seqdb_writer/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blastdb'
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer'
/usr/bin/make[4] (Makefile.xobjsimple.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple'
cd algo/blast/unit_tests/seqdb_reader/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader'
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blastdb'
cd app/blast/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader'
cd app/blastdb/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
/usr/bin/make[4] (Makefile.blast_unit_test_util.lib): Nothing to be done for `export-headers'.
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/make[4] (Makefile.writedb.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer'
cd app/dustmasker/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/dustmasker'
/usr/bin/make[4] (Makefile.seqalign_util.lib): Nothing to be done for `export-headers'.
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/dustmasker'
cd algo/segmask/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast/Makefile.legacy_blast builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast -w -j --jobserver-fds=3,4 all
/usr/bin/make[4] (Makefile.xalgosegmask.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask'
cd app/segmasker/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/segmasker'
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/segmasker'
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast/legacy_blast.pl /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast/legacy_blast.pl /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/legacy_blast.pl
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
cd app/winmasker/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
cd objmgr/split/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast/Makefile.update_blastdb builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast -w -j --jobserver-fds=3,4 all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
/usr/bin/make[4] (Makefile.id2_split.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split'
cd objtools/align_format/unit_test/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast/update_blastdb.pl /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast/update_blastdb.pl /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/update_blastdb.pl
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format/unit_test'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/winmasker/Makefile.windowmasker_2.2.22_adapter builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/winmasker -w -j --jobserver-fds=3,4 all
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format/unit_test'
cd objtools/blast/blastdb_format/unit_test/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format/unit_test'
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format/unit_test'
cd objtools/blast/gene_info_reader/demo/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/demo'
/usr/bin/make[4] (Makefile.blast_app_util.lib): Nothing to be done for `export-headers'.
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/demo'
cd objtools/blast/gene_info_reader/unit_test/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test'
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/winmasker/windowmasker_2.2.22_adapter.py /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/winmasker/windowmasker_2.2.22_adapter.py /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/windowmasker_2.2.22_adapter.py
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test'
cd objtools/blast/seqdb_reader/demo/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/demo'
cd objtools/blast/seqdb_reader/test/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/test'
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/demo'
cd objtools/blast/seqdb_writer/unit_test/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/test'
cd objtools/blast/services/unit_test/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test'
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services/unit_test'
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test'
cd corelib/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=corelib UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Nothing to be done for 'sources'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services/unit_test'
cd algo/blast/composition_adjustment/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=composition_adjustment UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/composition_adjustment TMPL=composition_adjustment -w -j --jobserver-fds=3,4 all
/usr/bin/make[4] (Makefile.corelib.lib): Nothing to be done for `all'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
cd util/tables/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=tables UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/tables TMPL=tables -w -j --jobserver-fds=3,4 all
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/composition_adjustment/compo_heap.c:137:1: warning: 's_CompoHeapIsValid' defined but not used [-Wunused-function]
s_CompoHeapIsValid(BlastCompo_HeapRecord * heapArray, int i, int n)
^~~~~~~~~~~~~~~~~~
cd connect/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=xconnect UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect TMPL=xconnect -w -j --jobserver-fds=3,4 all
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/run_with_lock: Adjusting base from make_xconnect to make__connect_common per /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/.#lock-map.
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables'
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/tables/raw_scoremat.c -o raw_scoremat.o
/bin/rm -f libtables.so .libtables.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libtables.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC raw_scoremat.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtables.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libtables.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libtables.so
/bin/ln -f .tables.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.tables.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables'
cd util/sequtil/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=sequtil UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/sequtil TMPL=sequtil -w -j --jobserver-fds=3,4 all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbsmd_stub.c -o ncbi_lbsmd_stub.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ansi_ext.c -o ncbi_ansi_ext.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_buffer.c -o ncbi_buffer.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_types.c -o ncbi_types.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.c -o ncbi_priv.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_core.c -o ncbi_core.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/nIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_util.c:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_util.c: In function 'CORE_SetLOGFILE_NAME_Ex':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_util.c:150:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(1, eLOG_Error, errno,
^~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment'
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/composition_adjustment/compo_heap.c -o compo_heap.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/composition_adjustment/compo_mode_condition.c -o compo_mode_condition.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/composition_adjustment/composition_adjustment.c -o composition_adjustment.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/composition_adjustment/matrix_frequency_data.c -o matrix_frequency_data.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/composition_adjustment/nlm_linear_algebra.c -o nlm_linear_algebra.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/bmake[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/composition_adjustment/redo_alignment.c:200:1: warning: 's_DistinctAlignmentsLength' defined but not used [-Wunused-function]
s_DistinctAlignmentsLength(BlastCompo_Alignment * list)
^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/composition_adjustment/redo_alignment.c:185:1: warning: 's_AlignmentsAreSorted' defined but not used [-Wunused-function]
s_AlignmentsAreSorted(BlastCompo_Alignment * alignments)
^~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:76:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connssl.h:47:25: warning: ISO C restricts enumerator values to range of 'int' [-Wpedantic]
eNcbiCred_MbedTls = 0xC12CC16C
^~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:77:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_DoLog':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:508:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(112, level,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:247:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, data, size)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:199:5: note: in expansion of macro 'DO_CORE_LOG_DATA'
DO_CORE_LOG_DATA(NCBI_C_ERRCODE_X, subcode, level, data, size, \
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:548:13: note: in expansion of macro 'CORE_DATAF_X'
CORE_DATAF_X(109, level, data, size,
^~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:581:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(113, level,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:589:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_InitAPI_':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:872:13: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Secure socket layer (SSL) has not"
^~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_gethostname':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:1027:13: note: in expansion of macro 'CORE_LOG_ERRNO_EXX'
CORE_LOG_ERRNO_EXX(103, eLOG_Error,
^~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:1036:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(104, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_gethostbyname_':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:1169:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(106, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_getlocalhostaddress':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:1208:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(9, reget == eDefault ? eLOG_Warning : eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_gethostbyname':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:1234:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(155, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_gethostbyaddr_':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:1365:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(108, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_gethostbyaddr':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:1399:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(10, eLOG_Warning,
^~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c:35:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connssl.h:47:25: warning: ISO C restricts enumerator values to range of 'int' [-Wpedantic]
eNcbiCred_MbedTls = 0xC12CC16C
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'x_TryLowerSockFileno':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:1523:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(111, eLOG_Trace,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_Select_':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:1648:21: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(145, eLOG_Error, errno,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:1777:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(5, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_Poll_':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:1921:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(146, eLOG_Critical, errno,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:2066:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(147, ready ? eLOG_Warning : eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_IsConnected_':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:2640:13: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Trace,
^~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:2650:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(6, eLOG_Trace,
^~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/sequtil/sequtil.cpp:32:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:2685:25: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Trace,
^~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_Recv':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:2836:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(7, eLOG_Trace,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_Read_':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:3017:17: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(8, eLOG_Error, errno,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_Send':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:3368:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(11, eLOG_Trace,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_WritePending':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:3520:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(12, sock->log != eOff
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_Shutdown':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:3692:21: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(13, !tv || (tv->tv_sec | tv->tv_usec)
^~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c: In function 'ConnNetInfo_Log':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:115:54: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
LOG_Write(lg, code, subcode, level, THIS_MODULE, CORE_CURRENT_FUNCTION, \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c:1412:9: note: in expansion of macro 'LOG_WRITE'
LOG_WRITE(lg, NCBI_C_ERRCODE_X, 11,
^~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:3729:25: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(127, eLOG_Trace,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:3778:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(16, eLOG_Trace,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_Close_':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:3842:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(17, eLOG_Trace,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c: In function 'URL_ConnectEx':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c:1637:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(2, eLOG_Critical, "[URL_Connect] Bad argument(s)");
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:3858:21: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(18, eLOG_Trace,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c:1654:9: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Critical,
^~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:3888:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(19, eLOG_Trace,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c:1686:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(3, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c:1702:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(4, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c:1753:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(5, eLOG_Error, x_errno,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c:1770:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(6, eLOG_Error, x_errno,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:3947:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(21, abort == 1 ? eLOG_Warning : eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c:1814:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(7, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c: In function 'URL_Connect':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c:1847:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(9, eLOG_Error,
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c:1887:17: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(8, eLOG_Error, errno,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_Connect_':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4064:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(131, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4083:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(142, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4107:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(22, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4138:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(23, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4204:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(151, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4215:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(135, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4278:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(25, sock->log != eOff
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4322:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(26, sock->log != eOff
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_Create':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4408:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(27, eLOG_Error, errno,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_CreateOnTop':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4461:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(47, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4484:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(148, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4522:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(48, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4563:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(50, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4577:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(49, eLOG_Error, errno,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4640:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(132, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4663:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(153, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4674:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(138, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4694:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(124, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4709:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(43, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_CreateListening':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4762:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(144, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4806:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(34, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4852:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(35, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4907:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(36, error != SOCK_EADDRINUSE
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4928:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(150, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4998:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(37, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5065:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(115, eLOG_Note,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_Accept':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5112:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(39, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5168:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(40, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5227:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(41, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5286:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(42, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5297:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(152, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5308:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(137, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5328:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(128, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_CloseListening':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5373:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(44, eLOG_Note,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5402:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(45, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_RecvMsg':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5490:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(20, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5538:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(94, eLOG_Trace,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 's_SendMsg':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5573:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(154, eLOG_Error, errno,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5589:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(88, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5598:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(89, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5648:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(90, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5694:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(91, eLOG_Trace,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'TRIGGER_Create':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5737:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(28, eLOG_Error, errno,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5747:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(143, eLOG_Warning, errno,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5759:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(29, eLOG_Error, errno,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5769:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(30, eLOG_Warning, errno,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5788:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(116, eLOG_Note,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'TRIGGER_Close':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5850:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(117, eLOG_Note,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'LSOCK_GetOSHandleEx':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6061:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(46, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'SOCK_Reconnect':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6249:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(52, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6259:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(53, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6271:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(51, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'SOCK_Shutdown':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6301:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(54, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6308:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(55, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6316:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(15, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'SOCK_Wait':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6446:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(56, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6474:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(57, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6488:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(58, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6502:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(59, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6511:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(60, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6521:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(61, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6531:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(62, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetTimeout':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6668:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(63, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'SOCK_GetTimeout':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6709:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(64, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'SOCK_Read':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6751:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(65, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6761:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(66, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'SOCK_ReadLine':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6792:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(125, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'SOCK_Pushback':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6868:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(67, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'SOCK_Write':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6920:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(68, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6947:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(69, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6957:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(70, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'SOCK_Abort':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6976:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(71, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6983:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(72, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'SOCK_GetOSHandleEx':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7133:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(73, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetCork':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7196:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(158, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7203:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(159, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7216:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(160, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'SOCK_DisableOSSendDelay':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7233:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(156, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7240:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(157, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7253:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(75, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'DSOCK_CreateEx':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7305:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(76, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'DSOCK_Bind':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7426:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(79, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7433:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(78, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7451:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(80, error != SOCK_EADDRINUSE
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7467:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(114, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'DSOCK_Connect':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7496:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(82, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7503:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(81, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7522:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(83, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7535:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(84, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7564:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(85, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'DSOCK_WaitMsg':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7592:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(96, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7599:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(95, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'DSOCK_RecvMsg':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7638:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(93, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7645:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(92, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'DSOCK_SendMsg':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7682:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(87, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7689:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(86, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'DSOCK_WipeMsg':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7721:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(98, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7728:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(97, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7748:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(99, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'DSOCK_SetBroadcast':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7766:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(101, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7773:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(100, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7793:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(102, eLOG_Error,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetReuseAddress':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7955:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX'
CORE_LOGF_ERRNO_EXX(74, eLOG_Warning,
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetupSSLInternal':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:8339:13: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Cannot reset SSL while it is in use");
^~~~~~~~
last/composition_adjustment/optimize_target_freq.c -o optimize_target_freq.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/composition_adjustment/redo_alignment.c -o redo_alignment.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/composition_adjustment/smith_waterman.c -o smith_waterman.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/composition_adjustment/unified_pvalues.c -o unified_pvalues.o
/bin/rm -f libcomposition_adjustment.so .libcomposition_adjustment.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libcomposition_adjustment.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC compo_heap.o compo_mode_condition.o composition_adjustment.o matrix_frequency_data.o nlm_linear_algebra.o optimize_target_freq.o redo_alignment.o smith_waterman.o unified_pvalues.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libcomposition_adjustment.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libcomposition_adjustment.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libcomposition_adjustment.so
/bin/ln -f .composition_adjustment.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.composition_adjustment.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment'
cd util/creaders/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=creaders UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/creaders TMPL=creaders -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/sequtil/sequtil_convert.cpp:32:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/sequtil/sequtil_convert_imp.cpp:32:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cd objtools/blast/gene_info_reader/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=gene_info UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/gene_info_reader TMPL=gene_info -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/gene_info_reader/gene_info.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/gene_info_reader/gene_info.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders'
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/creaders/alnread.c -o alnread.o
/bin/rm -f libcreaders.so .libcreaders.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libcreaders.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC alnread.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libcreaders.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libcreaders.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libcreaders.so
/bin/ln -f .creaders.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.creaders.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders'
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'x_ReInit':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX'
#define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status)
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:273:13: note: in expansion of macro 'CONN_LOG'
CONN_LOG(4, ReInit, eLOG_Critical, "Partial re-init not allowed");
^~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX'
#define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status)
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:303:21: note: in expansion of macro 'CONN_LOG'
CONN_LOG(3, Close,
^~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX'
#define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status)
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:307:21: note: in expansion of macro 'CONN_LOG'
CONN_LOG(3, ReInit, eLOG_Error,
^~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 's_Open':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX'
#define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status)
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:384:9: note: in expansion of macro 'CONN_LOG'
CONN_LOG(5, Open, eLOG_Error, "Failed to open connection");
^~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'CONN_CreateEx':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX'
#define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status)
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:426:9: note: in expansion of macro 'CONN_LOG'
CONN_LOG(2, Create, eLOG_Error, "NULL connector");
^~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'CONN_ReInit':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:448:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(1, ReInit);
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:448:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(1, ReInit);
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'CONN_GetType':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:456:5: note: in expansion of macro 'CONN_NOT_NULL_EX'
CONN_NOT_NULL_EX(6, GetType, 0);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:456:5: note: in expansion of macro 'CONN_NOT_NULL_EX'
CONN_NOT_NULL_EX(6, GetType, 0);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'CONN_Description':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:465:5: note: in expansion of macro 'CONN_NOT_NULL_EX'
CONN_NOT_NULL_EX(7, Description, 0);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:465:5: note: in expansion of macro 'CONN_NOT_NULL_EX'
CONN_NOT_NULL_EX(7, Description, 0);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'CONN_GetPosition':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:477:5: note: in expansion of macro 'CONN_NOT_NULL_EX'
CONN_NOT_NULL_EX(30, GetPosition, 0);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:477:5: note: in expansion of macro 'CONN_NOT_NULL_EX'
CONN_NOT_NULL_EX(30, GetPosition, 0);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:490:9: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(31, GetPosition, eLOG_Error, errbuf, 0);
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'CONN_SetTimeout':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:506:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(8, SetTimeout);
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:506:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(8, SetTimeout);
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:546:9: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(9, SetTimeout, eLOG_Error, errbuf, eIO_InvalidArg);
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'CONN_GetTimeout':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:561:5: note: in expansion of macro 'CONN_NOT_NULL_EX'
CONN_NOT_NULL_EX(10, GetTimeout, 0);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:561:5: note: in expansion of macro 'CONN_NOT_NULL_EX'
CONN_NOT_NULL_EX(10, GetTimeout, 0);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:569:9: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(11, GetTimeout, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:584:9: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(12, GetTimeout, eLOG_Error, errbuf, 0);
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'CONN_Wait':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:600:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(13, Wait);
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:600:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(13, Wait);
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX'
#define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status)
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:644:9: note: in expansion of macro 'CONN_LOG'
CONN_LOG(event != eIO_Read ? 15 : 14, Wait, level,
^~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 's_CONN_Write':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX'
#define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status)
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:665:9: note: in expansion of macro 'CONN_LOG'
CONN_LOG(16, Write, eLOG_Critical, "Cannot write data");
^~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX'
#define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status)
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:707:13: note: in expansion of macro 'CONN_LOG'
CONN_LOG(17, Write, level, "Unable to write data");
^~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'CONN_Write':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:749:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(18, Write);
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:749:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(18, Write);
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'CONN_Pushback':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:784:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(19, Pushback);
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:784:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(19, Pushback);
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'CONN_Flush':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:804:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(20, Flush);
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:804:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(20, Flush);
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX'
#define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status)
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:819:9: note: in expansion of macro 'CONN_LOG'
CONN_LOG(21, Flush, eLOG_Warning, "Failed to flush");
^~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 's_CONN_Read':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX'
#define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status)
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:844:9: note: in expansion of macro 'CONN_LOG'
CONN_LOG(22, Read, eLOG_Critical, "Cannot read data");
^~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:885:17: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(32, Read, eLOG_Critical,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX'
#define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status)
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:911:13: note: in expansion of macro 'CONN_LOG'
CONN_LOG(23, Read, level, "Unable to read data");
^~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'CONN_Read':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:962:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(24, Read);
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:962:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(24, Read);
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'CONN_ReadLine':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:1011:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(25, ReadLine);
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:1011:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(25, ReadLine);
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:1059:17: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(35, ReadLine, eLOG_Critical,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'CONN_Status':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:1078:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(26, Status);
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:1078:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(26, Status);
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'CONN_Close':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:1117:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(27, Close);
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:1117:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(27, Close);
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'CONN_SetCallback':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:1137:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(28, SetCallback);
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:1137:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(28, SetCallback);
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:1143:9: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(29, SetCallback, eLOG_Error, errbuf, eIO_InvalidArg);
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function 'CONN_GetSOCK':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:1164:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(36, GetSOCK);
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX'
CONN_LOG_EX(subcode, func_name, eLOG_Critical, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX'
#define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg)
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:1164:5: note: in expansion of macro 'CONN_NOT_NULL'
CONN_NOT_NULL(36, GetSOCK);
^~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/sequtil/sequtil_manip.cpp:32:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connector.c:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connector.c: In function 'METACONN_Remove':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connector.c:41:5: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connector.c:63:13: note: in expansion of macro 'METACONN_LOG'
METACONN_LOG(34, eLOG_Error,
^~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connector.c: In function 'METACONN_Insert':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connector.c:41:5: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connector.c:92:9: note: in expansion of macro 'METACONN_LOG'
METACONN_LOG(33, eLOG_Error,
^~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket_connector.c:38:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket_connector.c: In function 's_VT_Open':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket_connector.c:171:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(163, eLOG_Error,
^~~~~~~~~~~
o-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_util.c -o ncbi_util.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c -o ncbi_socket.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c -o ncbi_connutil.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c -o ncbi_connection.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connector.c -o ncbi_connector.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket_connector.c -o ncbi_socket_connector.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:38:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c: In function 's_Adjust':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:368:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(2, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:383:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(17, eLOG_Trace,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:409:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(3, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:424:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(18, eLOG_Trace,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:434:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(4, eLOG_Critical,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:458:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c: In function 's_Connect':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:561:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(5, eLOG_Critical,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:701:25: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(20, eLOG_Error, error,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c: In function 's_ConnectAndSend':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:912:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(6, eLOG_Error, error,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c: In function 'x_ReadChunkHead':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1043:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(23, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c: In function 's_ReadData':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1114:17: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(24, eLOG_Error, error,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1138:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(25, eLOG_Error, error,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c: In function 's_ReadHeader':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1212:17: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(7, eLOG_Error, error,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1249:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(8, level,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:247:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, data, size)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:199:5: note: in expansion of macro 'DO_CORE_LOG_DATA'
DO_CORE_LOG_DATA(NCBI_C_ERRCODE_X, subcode, level, data, size, \
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1313:9: note: in expansion of macro 'CORE_DATAF_X'
CORE_DATAF_X(9, fatal ? eLOG_Error : eLOG_Note, hdr, size,
^~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1330:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(22, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:247:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, data, size)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:199:5: note: in expansion of macro 'DO_CORE_LOG_DATA'
DO_CORE_LOG_DATA(NCBI_C_ERRCODE_X, subcode, level, data, size, \
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1349:17: note: in expansion of macro 'CORE_DATAF_X'
CORE_DATAF_X(9, eLOG_Note, hdr, size,
^~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1399:25: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(10, eLOG_Critical,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1557:21: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning,
^~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1575:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X'
CORE_LOGF_ERRNO_X(11, eLOG_Error, error,
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1630:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(19, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1635:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(12, err && !(uuu->flags & fHTTP_SuppressMessages)
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1646:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(13, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:247:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, data, size)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:199:5: note: in expansion of macro 'DO_CORE_LOG_DATA'
DO_CORE_LOG_DATA(NCBI_C_ERRCODE_X, subcode, level, data, size, \
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1654:17: note: in expansion of macro 'CORE_DATAF_X'
CORE_DATAF_X(14, eLOG_Note, s, n,
^~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1663:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(15, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c: In function 's_Read':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1834:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(16, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1877:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(21, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c: In function 's_VT_Write':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:2116:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(24, eLOG_Error,
^~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/env_reg.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/gene_info_reader/gene_info_reader.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/gene_info_reader/gene_info.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/gene_info_reader/file_utils.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/gene_info_reader/file_utils.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/sequtil/sequtil.hpp:34,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/sequtil/sequtil_tables.hpp:34,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/sequtil/sequtil_tables.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:115:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Create':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:269:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:290:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(2, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_AttachFast':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:314:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(3, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:323:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(4, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Attach':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:354:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(34, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:337:68: warning: variable 'p' set but not used [-Wunused-but-set-variable]
const SHEAP_HeapBlock* b = (const SHEAP_HeapBlock*) base, *p = 0;
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:115:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c: In function 's_HEAP_Find':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:451:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(8, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Alloc':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:658:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(6, eLOG_Warning, "Heap Alloc: NULL heap");
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:664:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(7, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:711:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(9, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Free':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:833:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(10, eLOG_Warning, "Heap Free: NULL heap");
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:839:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(11, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:852:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(13, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:860:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(12, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:872:5: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(14, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_FreeFast':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:884:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(15, eLOG_Warning, "Heap Free: NULL heap");
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:890:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(16, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:904:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(17, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:915:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(18, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:922:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(19, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Trim':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:944:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(30, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:979:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(31, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:1006:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(32, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c: In function 's_HEAP_Walk':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:1028:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(28, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:1042:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(26, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:1045:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(27, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:1057:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(23, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:1144:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(21, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:1159:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(20, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:1177:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(22, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:1188:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(24, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Walk':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:1204:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(29, eLOG_Warning, "Heap Walk: NULL heap");
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Destroy':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:1306:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(33, eLOG_Error,
^~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service.c:41:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service.c: In function 'x_ServiceName':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service.c:85:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(7, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service.c:94:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(8, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service.c: In function 'x_Open':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service.c:336:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, eLOG_Error,
^~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/sequtil/sequtil_shared.cpp:32:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cd html/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=html UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/html'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/html TMPL=html -w -j --jobserver-fds=3,4 all
I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_file_connector.c -o ncbi_file_connector.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c -o ncbi_http_connector.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_memory_connector.c -o ncbi_memory_connector.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c -o ncbi_heapmgr.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_server_info.c -o ncbi_server_info.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service.c -o ncbi_service.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_host_info.c -o ncbi_host_info.omake[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/sequtil/sequtil.cpp -o sequtil.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/sequtil/sequtil_convert.cpp -o sequtil_convert.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/sequtil/sequtil_convert_imp.cpp -o sequtil_convert_imp.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/sequtil/sequtil_manip.cpp -o sequtil_manip.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/sequtil/sequtil_tables.cpp -o sequtil_tables.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/sequtil/sequtil_shared.cpp -o sequtil_shared.o
/bin/rm -f libsequtil.so .libsequtil.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libsequtil.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_dispd.c:38:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_dispd.c: In function 's_Resolve':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_dispd.c:198:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(5, eLOG_Error,
^~~~~~~~~~~
-g -O -fPIC sequtil.o sequtil_convert.o sequtil_convert_imp.o sequtil_manip.o sequtil_tables.o sequtil_shared.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsequtil.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libsequtil.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libsequtil.so
/bin/ln -f .sequtil.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.sequtil.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil'
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c: In function 's_OpenDispatcher':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c:105:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(5, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c: In function 's_ParseHeader':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c:180:49: warning: format '%n' expects argument of type 'int *', but argument 7 has type 'unsigned int *' [-Wformat=]
if (sscanf(header, "%u.%u.%u.%u%n", &i1, &i2, &i3, &i4, &n) < 4
~^ ~~
%n
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c:181:51: warning: format '%n' expects argument of type 'int *', but argument 5 has type 'unsigned int *' [-Wformat=]
|| sscanf(header + n, "%hu%x%n", &uuu->port, &tkt, &m) < 2
~^ ~~
%n
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c: In function 's_Open':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c:890:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(4, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c:916:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(9, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c: In function 's_VT_Open':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c:1048:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(10, eLOG_Critical,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c:1126:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(6, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c:1138:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(11, eLOG_Error,
^~~~~~~~~~~
cd corelib/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=test_boost UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
/usr/bin/make[4] (Makefile.test_boost.lib): Nothing to be done for `all'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=GENEINFO -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/gene_info_reader/gene_info.cpp -o gene_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=GENEINFO -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/gene_info_reader/gene_info_reader.cpp -o gene_info_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=GENEINFO -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/gene_info_reader/file_utils.cpp -o file_utils.o
/bin/rm -f libgene_info.so .libgene_info.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libgene_info.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC gene_info.o gene_info_reader.o file_utils.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgene_info.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libgene_info.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libgene_info.so
/bin/ln -f .gene_info.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.gene_info.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader'
cd util/xregexp/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=xregexp UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
/usr/bin/make[4] (Makefile.xregexp.lib): Nothing to be done for `all'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
cd objtools/blast/gene_info_reader/unit_test/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=gene_info_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/gene_info_reader/unit_test TMPL=gene_info_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/html/node.cpp:31:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c: In function 's_SendRcpt':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:417:13: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(3, "Recipient address is too long");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:420:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:428:13: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(4, write_error);
^~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:366:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:432:13: note: in expansion of macro 'SENDMAIL_RETURN2'
SENDMAIL_RETURN2(5, proto_error, buf);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c: In function 'CORE_SendMailEx':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:487:9: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(6, "SSendMailInfo inited improperly: invalid magic");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:492:9: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(7, "At least one message recipient must be specified");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:366:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:502:9: note: in expansion of macro 'SENDMAIL_RETURN2'
SENDMAIL_RETURN2(8, "Cannot connect to sendmail", buffer);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:366:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:509:9: note: in expansion of macro 'SENDMAIL_RETURN2'
SENDMAIL_RETURN2(9, "Protocol error in connection init", buffer);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:514:9: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(10, "Unable to get local host name");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:519:9: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(11, "Write error in HELO command");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:366:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:522:9: note: in expansion of macro 'SENDMAIL_RETURN2'
SENDMAIL_RETURN2(12, "Protocol error in HELO command", buffer);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:527:9: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(13, "Write error in MAIL command");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:366:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:530:9: note: in expansion of macro 'SENDMAIL_RETURN2'
SENDMAIL_RETURN2(14, "Protocol error in MAIL command", buffer);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:551:9: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(15, "Write error in DATA command");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:366:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:553:9: note: in expansion of macro 'SENDMAIL_RETURN2'
SENDMAIL_RETURN2(16, "Protocol error in DATA command", buffer);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:584:21: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(32, "Write error in sending Date");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:591:21: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(33, "Write error in sending From");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:599:17: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(17, "Write error in sending Subject");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:606:17: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(18, "Write error in sending To");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:613:17: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(19, "Write error in sending Cc");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:617:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(2, eLOG_Warning,
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:628:9: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(20, "Write error in sending mailer information");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:656:17: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(21, "Write error while sending custom header");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:366:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:665:13: note: in expansion of macro 'SENDMAIL_RETURN2'
SENDMAIL_RETURN2(22, error, buffer);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:668:13: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(23, "Write error in finalizing custom header");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:677:17: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(24, "Write error in message body delimiter");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:703:17: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(25, "Write error while sending message body");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:366:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:712:13: note: in expansion of macro 'SENDMAIL_RETURN2'
SENDMAIL_RETURN2(26, error, buffer);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:716:13: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(27, "Write error while finalizing message body");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:719:9: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(28, "Write error while finalizing message");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:366:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:724:9: note: in expansion of macro 'SENDMAIL_RETURN2'
SENDMAIL_RETURN2(29, "Protocol error in sending message", buffer);
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:727:9: note: in expansion of macro 'SENDMAIL_RETURN'
SENDMAIL_RETURN(30, "Write error in QUIT command");
^~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:366:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(subcode, eLOG_Error, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:729:9: note: in expansion of macro 'SENDMAIL_RETURN2'
SENDMAIL_RETURN2(31, "Protocol error in QUIT command", buffer);
^~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/html/html.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/html/html.cpp:31:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:50:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPCloseData':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:145:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(7, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:150:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(9, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:164:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(11, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:168:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(8, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:185:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, xxx->send ? eLOG_Error : eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c: In function 's_FTPReply':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:293:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(10, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c: In function 's_FTPCommandEx':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:373:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(4, eLOG_Trace,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPLogin':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:606:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(3, eLOG_Trace,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPPassive':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:965:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(2, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPXfer':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:1125:21: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(5, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c: In function 's_FTPPollCntl':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:1656:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(12, xxx->data ? eLOG_Error : eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c: In function 's_VT_Open':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:1926:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(13, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c: In function 's_VT_Write':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:2001:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(6, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c: In function 's_CreateConnector':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:2311:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "fFTP_UseProxy not yet implemented");
^~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/gene_info_reader/unit_test/gene_info_test.cpp:31:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_dispd.c -o ncbi_dispd.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c -o ncbi_service_connector.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c -o ncbi_sendmail.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c -o ncbi_ftp_connector.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lb.c -o ncbi_lb.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_local.c -o ncbi_local.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-sIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:38:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 'g_LBOS_StringConcat':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:437:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eLBOS_MemAlloc, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 'g_LBOS_StringNConcat':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:462:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eLBOS_MemAlloc, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 'g_LBOS_RegGet':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:486:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eLBOS_MemAlloc, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:500:13: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eLBOS_MemAlloc, eLOG_Warning,
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 'g_LBOS_GetLBOSAddressEx':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:568:5: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Trace, "Getting LBOS addresses...");
^~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:582:17: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(1, eLOG_Error, "Use of custom LBOS address "
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:163:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:589:17: note: in expansion of macro 'CORE_LOG_ERRNO_X'
CORE_LOG_ERRNO_X(1, eLOG_Warning, errno,
^~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:597:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:608:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, eLOG_Note,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_ReadLbosresolver':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:175:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(0, 0, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:727:9: note: in expansion of macro 'CORE_LOGF_ERRNO'
CORE_LOGF_ERRNO(eLOG_Warning, errno,
^~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:175:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO'
DO_CORE_LOG_ERRNO(0, 0, level, error, 0, \
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:736:9: note: in expansion of macro 'CORE_LOGF_ERRNO'
CORE_LOGF_ERRNO(eLOG_Warning, errno,
^~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:745:9: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Warning,
^~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_ConnectURL':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:829:5: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Trace, ("Parsing URL \"%s\"", url));
^~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:831:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning, "Cannot parse URL");
^~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:834:5: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Trace, ("Creating HTTP%s connector",
^~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:841:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning, "Cannot create HTTP connector");
^~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:844:5: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Trace, "Creating connection");
^~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:846:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning, "Cannot create connection");
^~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_UrlReadAll':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:905:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "s_LBOS_UrlReadAll: No RAM. "
^~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:917:13: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Critical, ("s_LBOS_UrlReadAll: LBOS returned "
^~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:945:17: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning, "s_LBOS_UrlReadAll: Buffer "
^~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:959:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning, "s_LBOS_UrlReadAll: Buffer shrink error, using "
^~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_ResolveIPPort':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:991:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "s_LBOS_ResolveIPPort: No RAM. "
^~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1050:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "s_LBOS_ResolveIPPort: No RAM. "
^~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_FillCandidates':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1200:5: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, eLOG_Trace, ("Trying to find servers of \"%s\" with "
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1206:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, eLOG_Trace, ("No servers of \"%s\" found by LBOS",
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1211:5: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, eLOG_Trace, ("Found %u servers of \"%s\" with "
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1224:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_CheckAnnounceArgs':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1254:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Error with announcement, "
^~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1261:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Error with announcement, missing http:// or "
^~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1271:17: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Error with announcement, "
^~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1281:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Error with announcement, invalid port.");
^~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1285:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Error with announcement, "
^~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1290:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Error with announcement, "
^~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1295:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Error with announcement, "
^~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_CheckDeannounceArgs':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1309:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Invalid argument passed for de-announcement, "
^~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1315:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Invalid argument passed for de-announcement, "
^~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1320:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Invalid argument passed for de-announcement, "
^~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1325:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "Invalid argument passed for de-announcement, "
^~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_Replace0000WithIP':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1410:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning, "Failed memory allocation. Most likely, "
^~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1418:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning,
^~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1425:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning,
^~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_ConstructData':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1569:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(1, eLOG_Error, "Could not allocate memory for LBOS mapper");
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_Initialize':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1644:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(1, eLOG_Trace, "No DTAB in registry");
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1646:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, eLOG_Trace,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1660:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(1, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_ParseHeader':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1708:9: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Critical, ("s_LBOS_UrlReadAll: LBOS returned status "
^~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_Reset':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1771:17: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "s_LBOS_Reset: No RAM. "
^~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 'SERV_LBOS_Open':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1897:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning, "Mask was provided instead of service name. "
^~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1905:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning, "\"iter->name\" is null, not able "
^~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1920:13: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning, "Could not concatenate dbaf with service "
^~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1935:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning,
^~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1949:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical,
^~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_Announce':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2064:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning, "Announce failed. No LBOS found.");
^~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2069:9: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Warning, ("Announce failed. "
^~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2078:13: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning, "Failed memory allocation. Most likely, "
^~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2088:13: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Warning, "g_LBOS_Announce: LBOS answered 200 OK, but "
^~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2101:9: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Warning, ("Announce failed. "
^~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 'LBOS_Announce':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2167:13: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eLBOS_InvalidArgs, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 'LBOS_AnnounceFromRegistry':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2236:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(eLBOS_InvalidArgs, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2243:53: warning: format '%d' expects argument of type 'int *', but argument 3 has type 'unsigned int *' [-Wformat=]
if (strlen(port_str) > 5 || (sscanf(port_str, "%d", &port) != 1) ||
~^ ~~~~~
%d
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:38:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 'LBOS_Deannounce':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2358:13: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eLBOS_DNSResolve, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 'LBOS_DeannounceAll':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2416:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eLBOS_MemAlloc, eLOG_Warning,
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 's_LBOS_CheckConfArgs':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2468:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eLBOS_InvalidArgs, eLOG_Warning,
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2475:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(eLBOS_InvalidArgs, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function 'LBOS_ServiceVersionSet':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2567:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eLBOS_InvalidArgs, eLOG_Warning,
^~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/html/html.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/html/htmlhelper.cpp:32:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:39:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function 's_Init':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:280:13: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Libc, eLOG_Error,
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function 's_CONN_Create':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:301:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(eNSub_Connect, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:310:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Connect, eLOG_Error, "Unable to create connector.");
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function 's_UpdateDtab':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:378:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Alloc, eLOG_Critical, "Couldn't alloc for dtab.");
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function 's_GetReqMethod':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:398:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Alloc, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function 's_GetScheme':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:420:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Alloc, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function 's_GetProxyPort':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:443:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Alloc, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function 's_AddServerInfo':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:527:13: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Alloc, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function 's_ParseExpires':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:577:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(eNSub_Json, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:607:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(eNSub_Json, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function 's_ReadFullResponse':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:652:13: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Alloc, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:686:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(eNSub_HttpRead, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:706:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_TooLong, eLOG_Error, "Insufficient buffer size.");
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function 's_ParseResponse':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:749:13: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Json, eLOG_Error,
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:754:13: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Json, eLOG_Error,
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:760:13: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Json, eLOG_Error,
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:776:13: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Json, eLOG_Error,
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:781:13: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(eNSub_NoService, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:789:13: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Json, eLOG_Error,
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:836:17: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Json, eLOG_Error,
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:844:17: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Json, eLOG_Error,
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:857:17: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Json, eLOG_Error,
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:863:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(eNSub_Json, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:897:21: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(eNSub_Json, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:914:21: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Json, eLOG_Error,
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:924:21: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(eNSub_Json, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:941:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(eNSub_Json, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:964:21: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(eNSub_Json, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:983:21: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Json, eLOG_Error,
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:989:21: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Json, eLOG_Warning,
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:1007:17: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Alloc, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:1024:17: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(eNSub_BadData, eLOG_Warning,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:1037:17: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Alloc, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function 's_GetDtabHeaderFromBuf':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:1079:13: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Alloc, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function 's_UpdateDtabFromRegistry':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:1140:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Alloc, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function 's_ProcessDtab':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:1181:13: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_TooLong, eLOG_Error, "Dtab too long.");
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function 'SERV_NAMERD_Open':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:1405:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_BadData, eLOG_Error,
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:1415:9: note: in expansion of macro 'CORE_LOGF_X'
CORE_LOGF_X(eNSub_BadData, eLOG_Error,
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:1424:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_BadData, eLOG_Error,
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:1431:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Alloc, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:1439:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_Alloc, eLOG_Critical, "Couldn't clone net_info.");
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:1446:9: note: in expansion of macro 'CORE_LOG_X'
CORE_LOG_X(eNSub_BadData, eLOG_Critical,
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/parson.c: In function 'remove_comments':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/parson.c:281:13: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
for (i = 0; i < (ptr - string) + end_token_len; i++)
^~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/parson.c:283:12: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
string = ptr + end_token_len - 1;
^~~~~~
ecurity -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_base64.c -o ncbi_base64.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_version.c -o ncbi_version.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c -o ncbi_lbos.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c -o ncbi_namerd.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/parson.c -o parson.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ipv6.c -o ncbi_ipv6.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /bIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/html/page.cpp:31:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_socket.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_socket_unix.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket_cxx.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_core_cxx.cpp:39:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/gene_info_reader/unit_test/gene_info_test.cpp -o gene_info_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie gene_info_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lgene_info -lxncbi -ldl -lm -lpthread -o gene_info_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f gene_info_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f gene_info_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/gene_info_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test'
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/email_diag_handler.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/email_diag_handler.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/html/pager.cpp:31:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/stream_utils.hpp:45:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/cgi/ncbicgi.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/html/selection.cpp:31:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_core_cxx.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_namedpipe.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_namedpipe_connector.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_conn_stream.hpp:73,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_conn_streambuf.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_conn_streambuf.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_core_cxx.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_namedpipe.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_namedpipe_connector.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_conn_stream.hpp:73,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_conn_streambuf.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_conn_stream.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/html'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/html/node.cpp -o node.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/html/html.cpp -o html.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/html/htmlhelper.cpp -o htmlhelper.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/html/page.cpp -o page.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/html/pager.cpp -o pager.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/html/selection.cpp -o selection.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7cd util/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=util UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util'
/usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `all'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util'
uild/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_iprange.c -o ncbi_iprange.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_localip.c -o ncbi_localip.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket_cxx.cpp -o ncbi_socket_cxx.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_core_cxx.cpp -o ncbi_core_cxx.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/email_diag_handler.cpp -o email_diag_handler.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_conn_streambuf.cpp -o ncbi_conn_streambuf.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_conn_stream.cpp -o ncbi_conn_stream.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LAIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/html/html.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/html/components.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/html/components.cpp:31:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_conn_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/html/commentdiag.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/html/commentdiag.cpp:31:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cd serial/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=serial UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/serial'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial TMPL=serial -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/hookdata.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/hookdatakey.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/html/indentstream.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/html/indentstream.cpp:31:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/html/node.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/html/html_exception.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/html/htmlhelper.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/html/writer_htmlenc.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/typeinfo.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cd util/compress/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=compress UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/compress/api TMPL=compress -w -j --jobserver-fds=3,4 all
.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/html/components.cpp -o components.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/html/commentdiag.cpp -o commentdiag.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/html/indentstream.cpp -o indentstream.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/html/html_exception.cpp -o html_exception.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/html/writer_htmlenc.cpp -o writer_htmlenc.o
/bin/rm -f libxhtml.so .libxhtml.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxhtml.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC node.o html.o htmlhelper.o page.o pager.o selection.o components.o commentdiag.o indentstream.o html_exception.o writer_htmlenc.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxhtml.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxhtml.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libxhtml.so
/bin/ln -f .xhtml.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.xhtml.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/html'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/html'
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/compress/compress.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/compress/api/compress.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/compress/compress.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/compress/stream.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/compress/api/streambuf.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/compress/api/stream.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_core_cxx.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_namedpipe.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namedpipe.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/objectinfo.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/objectiter.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/compress/compress.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/compress/stream.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/compress/api/streambuf.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/compress/api/streambuf.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/serial'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/hookdata.cpp -o hookdata.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/hookdatakey.cpp -o hookdatakey.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/typeinfo.cpp -o typeinfo.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/objectinfo.cpp -o objectinfo.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/objectiter.cpp -o objectiter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/objectio.cpp -o objectio.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THRIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/compress/compress.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/compress/stream.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/compress/stream_util.hpp:49,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/compress/api/stream_util.cpp:31:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_core_cxx.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_namedpipe.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_namedpipe_connector.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namedpipe_connector.cpp:38:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/objectio.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialdef.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/impl/typeref.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/typeref.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_pipe.cpp:41:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/compress/compress.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/compress/stream.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/compress/bzip2.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/compress/api/bzip2.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/compress/api/zlib.cpp:40:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/typemap.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/compress/api/compress.cpp -o compress.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/compress/api/stream.cpp -o stream.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/compress/api/streambuf.cpp -o streambuf.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/compress/api/stream_util.cpp -o stream_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/compress/api/bzip2.cpp -o bzip2.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/compress/api/zlib.cpp -o zlib.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialdef.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/stdtypes.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/compress/api/lzo.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_process.hpp:44:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_pipe.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_pipe_connector.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_pipe_connector.cpp:38:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/compress/api/tar.cpp:475:13: warning: In the GNU C Library, "major" is defined
by <sys/sysmacros.h>. For historical compatibility, it is
currently defined by <sys/types.h> as well, but we plan to
remove this soon. To use "major", include <sys/sysmacros.h>
directly. If you did not intend to use a system-defined macro
"major", you should undefine it after including <sys/types.h>.
return major(m_Stat.st_rdev);
^~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/compress/api/tar.cpp:490:13: warning: In the GNU C Library, "minor" is defined
by <sys/sysmacros.h>. For historical compatibility, it is
currently defined by <sys/types.h> as well, but we plan to
remove this soon. To use "minor", include <sys/sysmacros.h>
directly. If you did not intend to use a system-defined macro
"minor", you should undefine it after including <sys/types.h>.
return minor(m_Stat.st_rdev);
^~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/compress/api/tar.cpp:2221:13: warning: In the GNU C Library, "makedev" is defined
by <sys/sysmacros.h>. For historical compatibility, it is
currently defined by <sys/types.h> as well, but we plan to
remove this soon. To use "makedev", include <sys/sysmacros.h>
directly. If you did not intend to use a system-defined macro
"makedev", you should undefine it after including <sys/types.h>.
m_Current.m_Stat.st_rdev = makedev((unsigned int) val, usum);
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_core_cxx.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_conn_reader_writer.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_conn_reader_writer.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/compress/reader_zlib.hpp:33,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/compress/api/reader_zlib.cpp:31:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/compress/api/reader_zlib.cpp: In destructor 'virtual ncbi::CNlmZipReader::~CNlmZipReader()':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/compress/api/reader_zlib.cpp:281:19: warning: enum constant in boolean context [-Wint-in-bool-context]
if ( m_Own && fOwnReader ) {
^~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/compress/api/tar.cpp:52:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_conn_test.cpp -o ncbi_conn_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_misc.cpp -o ncbi_misc.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namedpipe.cpp -o ncbi_namedpipe.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namedpipe_connector.cpp -o ncbi_namedpipe_connector.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_pipe.cpp -o ncbi_pipe.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_pipe_connector.cpp -o ncbi_pipe_connector.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_conn_reader_writer.cpp -o ncbi_conn_reader_writer.o
/usr/bin/g++ -std=gnu++11 -c -WIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_socket.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_userhost.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_session.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos_cxx.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/enumerated.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/typeinfo.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/impl/ptrinfo.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/ptrinfo.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c:34:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connssl.h:47:25: warning: ISO C restricts enumerator values to range of 'int' [-Wpedantic]
eNcbiCred_MbedTls = 0xC12CC16C
^~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c: In function 'x_GnuTlsLogger':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c:190:5: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Note, ("GNUTLS%d: %.*s", level, (int) len, message));
^~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c: In function 'x_ErrorToStatus':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c:251:5: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Trace, ("GNUTLS error %d -> CONNECT GNUTLS status %s",
^~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c: In function 'x_StatusToError':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c:293:9: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Trace, ("CONNECT GNUTLS status %s -> %s %d",
^~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c: In function 's_GnuTlsCreate':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c:307:5: warning: 'gnutls_connection_end_t' is deprecated [-Wdeprecated-declarations]
gnutls_connection_end_t end = (side == eSOCK_Client
^~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c:318:9: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Error, "Server-side SSL not yet supported with GNUTLS");
^~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c:330:9: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Error, ("Cannot %s GNUTLS credentials: %s",
^~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c: In function 's_GnuTlsInit':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c:692:9: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(level, ("GNUTLS V%s (LogLevel=%d)",
^~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c:35:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:218:33: warning: 'version' may be used uninitialized in this function [-Wmaybe-uninitialized]
_mess.message = NcbiMessagePlusError(&_mess.dynamic, \
^~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c:657:17: note: 'version' was declared here
const char* version;
^~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c:34:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connssl.h:47:25: warning: ISO C restricts enumerator values to range of 'int' [-Wpedantic]
eNcbiCred_MbedTls = 0xC12CC16C
^~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c: In function 'x_MbedTlsLogger':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c:170:5: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Note, ("MBEDTLS%d: %.*s", level, (int) len, message));
^~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c: In function 'x_ErrorToStatus':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c:250:5: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Trace, ("MBEDTLS error %d -> CONNECT MBEDTLS status %s",
^~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c: In function 'x_StatusToError':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c:292:9: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Trace, ("CONNECT MBEDTLS status %s -> %s %d",
^~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c: In function 's_MbedTlsCreate':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c:336:9: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Error,
^~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c: In function 's_MbedTlsInit':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c:611:9: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Critical,
^~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c:639:9: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(level, ("%s V%s (LogLevel=%d)",
^~~~~~~~~
cd cgi/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=cgi UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/cgi'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/cgi TMPL=cgi -w -j --jobserver-fds=3,4 all
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/run_with_lock: Adjusting base from make_cgi to make__cgi_common per /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/cgi/.#lock-map.
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_safe_static.hpp:48,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/autoptrinfo.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
all -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_userhost.cpp -o ncbi_userhost.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_session.cpp -o ncbi_http_session.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos_cxx.cpp -o ncbi_lbos_cxx.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_monkey.cpp -o ncbi_monkey.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c -o ncbi_gnutls.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c -o ncbi_mbedtls.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_tls.c:34:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connssl.h:47:25: warning: ISO C restricts enumerator values to range of 'int' [-Wpedantic]
eNcbiCred_MbedTls = 0xC12CC16C
^~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_tls.c:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_tls.c: In function 's_NoTlsInit':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_tls.c:58:5: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "SSL has been explicitly disabled");
^~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_tls.c: In function 'x_SetupNoTls':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_tls.c:69:5: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Trace, "SSL has been explicitly disabled");
^~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_tls.c: In function 'NcbiSetupTls':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_tls.c:91:17: note: in expansion of macro 'CORE_LOGF'
CORE_LOGF(eLOG_Critical, ("Unknown TLS provider \"%s\"", str));
^~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic]
# define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION'
_mess.func = CORE_CURRENT_FUNCTION; \
^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X'
DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0)
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG'
DO_CORE_LOG(0, 0, level, \
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_tls.c:95:13: note: in expansion of macro 'CORE_LOG'
CORE_LOG(eLOG_Critical, "No TLS support included in this build");
^~~~~~~~
D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/connect/ncbi_tls.c -o ncbi_tls.o
/bin/rm -f libxconnect.so .libxconnect.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxconnect.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC ncbi_lbsmd_stub.o ncbi_ansi_ext.o ncbi_buffer.o ncbi_types.o ncbi_priv.o ncbi_core.o ncbi_util.o ncbi_socket.o ncbi_connutil.o ncbi_connection.o ncbi_connector.o ncbi_socket_connector.o ncbi_file_connector.o ncbi_http_connector.o ncbi_memory_connector.o ncbi_heapmgr.o ncbi_server_info.o ncbi_service.o ncbi_host_info.o ncbi_dispd.o ncbi_service_connector.o ncbi_sendmail.o ncbi_ftp_connector.o ncbi_lb.o ncbi_local.o ncbi_base64.o ncbi_version.o ncbi_lbos.o ncbi_namerd.o parson.o ncbi_ipv6.o ncbi_iprange.o ncbi_localip.o ncbi_socket_cxx.o ncbi_core_cxx.o email_diag_handler.o ncbi_conn_streambuf.o ncbi_conn_stream.o ncbi_conn_test.o ncbi_misc.o ncbi_namedpipe.o ncbi_namedpipe_connector.o ncbi_pipe.o ncbi_pipe_connector.o ncbi_conn_reader_writer.o ncbi_userhost.o ncbi_http_session.o ncbi_lbos_cxx.o ncbi_monkey.o ncbi_gnutls.o ncbi_mbedtls.o ncbi_tls.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lxncbi -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxconnect.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxconnect.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libxconnect.so
/bin/ln -f .xconnect.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.xconnect.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/cgi/ncbicgi.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/cgi/cgiapp.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/continfo.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/typeref.cpp -o typeref.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/typemap.cpp -o typemap.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/stdtypes.cpp -o stdtypes.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/enumerated.cpp -o enumerated.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/ptrinfo.cpp -o ptrinfo.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/autoptrinfo.cpp -o autoptrinfo.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/continfo.cpp -o continfo.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/impl/stltypesimpl.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/stltypes.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/memberid.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/memberlist.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/compress/api/archive.cpp:34:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/compress/api/archive_.cpp:87:13: warning: In the GNU C Library, "major" is defined
by <sys/sysmacros.h>. For historical compatibility, it is
currently defined by <sys/types.h> as well, but we plan to
remove this soon. To use "major", include <sys/sysmacros.h>
directly. If you did not intend to use a system-defined macro
"major", you should undefine it after including <sys/types.h>.
return major(m_Stat.st_rdev);
^~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/compress/api/archive_.cpp:103:13: warning: In the GNU C Library, "minor" is defined
by <sys/sysmacros.h>. For historical compatibility, it is
currently defined by <sys/types.h> as well, but we plan to
remove this soon. To use "minor", include <sys/sysmacros.h>
directly. If you did not intend to use a system-defined macro
"minor", you should undefine it after including <sys/types.h>.
return minor(m_Stat.st_rdev);
^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/item.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/cgi/cgictx.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/compress/archive_.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/compress/api/archive_.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/classinfob.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/member.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/compress/compress.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/compress/stream.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/compress/zlib.hpp:54,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/compress/api/archive_zip.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/compress/api/archive_zip.cpp:45:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/compress/api/miniz/miniz.c: In function 'ncbi::tinfl_status ncbi::tinfl_decompress(ncbi::tinfl_decompressor*, const mz_uint8*, size_t*, ncbi::mz_uint8*, ncbi::mz_uint8*, size_t*, ncbi::mz_uint32)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/compress/api/miniz/miniz.c:1531:9: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
for ( i = 0; i <= 143; ++i) *p++ = 8; for ( ; i <= 255; ++i) *p++ = 9; for ( ; i <= 279; ++i) *p++ = 7; for ( ; i <= 287; ++i) *p++ = 8;
^~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/compress/api/miniz/miniz.c:1531:47: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
for ( i = 0; i <= 143; ++i) *p++ = 8; for ( ; i <= 255; ++i) *p++ = 9; for ( ; i <= 279; ++i) *p++ = 7; for ( ; i <= 287; ++i) *p++ = 8;
^~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/compress/api/miniz/miniz.c: In function 'void ncbi::tdefl_find_match(ncbi::tdefl_compressor*, ncbi::mz_uint, ncbi::mz_uint, ncbi::mz_uint, ncbi::mz_uint*, ncbi::mz_uint*)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/compress/api/miniz/miniz.c:2361:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if (!dist) break; p = s; q = d->m_dict + probe_pos; for (probe_len = 0; probe_len < max_match_len; probe_len++) if (*p++ != *q++) break;
^~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/compress/api/miniz/miniz.c:2361:23: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (!dist) break; p = s; q = d->m_dict + probe_pos; for (probe_len = 0; probe_len < max_match_len; probe_len++) if (*p++ != *q++) break;
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/request_ctx.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/cgi/ncbicgir.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
URCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/stltypes.cpp -o stltypes.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/memberid.cpp -o memberid.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/memberlist.cpp -o memberlist.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/item.cpp -o item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/classinfob.cpp -o classinfob.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/member.cpp -o member.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/classinfo.cpp -o classinfo.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-coIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/classinfo.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/variant.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/compress/api/lzo.cpp -o lzo.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/compress/api/reader_zlib.cpp -o reader_zlib.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/compress/api/tar.cpp -o tar.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/compress/api/archive.cpp -o archive.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/compress/api/archive_.cpp -o archive_.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/compress/api/archive_zip.cpp -o archive_zip.o
/bin/rm -f libxcompress.so .libxcompress.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxcompress.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC compress.o stream.o streambuf.o stream_util.o bzip2.o zlib.o lzo.o reader_zlib.o tar.o archive.o archive_.o archive_zip.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lxutil -lxncbi -lbz2 -lz -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcompress.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxcompress.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libxcompress.so
/bin/ln -f .xcompress.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.xcompress.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api'
cd algo/blast/core/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=blast UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core TMPL=blast -w -j --jobserver-fds=3,4 all
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/aa_ungapped.c: In function 's_BlastAaWordFinder_TwoHit':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/aa_ungapped.c:484:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TAaScanSubjectFunction)(lookup->scansub_callback);
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/aa_ungapped.c:491:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TAaScanSubjectFunction)(lookup->scansub_callback);
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/aa_ungapped.c: In function 's_BlastAaWordFinder_OneHit':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/aa_ungapped.c:751:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TAaScanSubjectFunction)(lookup->scansub_callback);
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/aa_ungapped.c:758:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TAaScanSubjectFunction)(lookup->scansub_callback);
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_engine.c: In function 'BLAST_PreliminarySearchEngine':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_engine.c:1490:9: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
(T_MB_IdbCheckOid)lookup_wrap->check_index_oid;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_engine.c:1628:22: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
((T_MB_IdxEndSearchIndication)(
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_engine.c:1715:10: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
((T_MB_IdxEndSearchIndication)(
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/cgi/ncbires.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/impl/classinfob.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/impl/choice.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/choice.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core'
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/aa_ungapped.c -o aa_ungapped.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_diagnostics.c -o blast_diagnostics.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_engine.c -o blast_engine.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_extend.c -o blast_extend.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_filter.c -o blast_filter.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_gapalign.c -o blast_gapalign.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/buimake[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/cgi'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/cgi/ncbicgi.cpp -o ncbicgi.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/cgi/cgiapp.cpp -o cgiapp.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/cgi/cgictx.cpp -o cgictx.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/cgi/ncbicgir.cpp -o ncbicgir.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/cgi/ncbires.cpp -o ncbires.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/cgi/ref_args.cpp -o ref_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbiIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/cgi/ref_args.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/cgi/ref_args.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/cgi/cgiapp.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/cgi/cgi_run.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_safe_static.hpp:48,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/choiceptr.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_aalookup.c: In function 'BlastAaLookupFinalize':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_aalookup.c:324:13: warning: argument 1 range [2147483648, 4294967295] exceeds maximum object size 2147483647 [-Walloc-size-larger-than=]
calloc(lookup->backbone_size, sizeof(AaLookupBackboneCell));
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/core/ncbi_std.h:40:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/core/blast_aalookup.h:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_aalookup.c:31:
/usr/include/stdlib.h:426:14: note: in a call to allocation function 'calloc' declared here
extern void *calloc (size_t __nmemb, size_t __size)
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_aalookup.c:371:13: warning: argument 1 range [2147483648, 4294967295] exceeds maximum object size 2147483647 [-Walloc-size-larger-than=]
calloc(lookup->backbone_size, sizeof(AaLookupSmallboneCell));
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/core/ncbi_std.h:40:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/core/blast_aalookup.h:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_aalookup.c:31:
/usr/include/stdlib.h:426:14: note: in a call to allocation function 'calloc' declared here
extern void *calloc (size_t __nmemb, size_t __size)
^~~~~~
ld/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_hits.c -o blast_hits.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_hspstream.c -o blast_hspstream.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_itree.c -o blast_itree.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_kappa.c -o blast_kappa.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_lookup.c -o blast_lookup.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_aalookup.c -o blast_aalookup.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFI/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_aascan.c: In function 'BlastChooseProteinScanSubject':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_aascan.c:567:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lut->scansub_callback = (void *)s_BlastAaScanSubject;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_aascan.c:570:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lut->scansub_callback = (void *)s_BlastSmallAaScanSubject;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_aascan.c:575:33: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lut->scansub_callback = (void *)s_BlastCompressedAaScanSubject;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nalookup.c: In function 'BlastNaHashLookupTableNew':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nalookup.c:2225:27: warning: ISO C forbids assignment between function pointer and 'void *' [-Wpedantic]
lookup->hash_callback = FNV_hash;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nalookup.c:2284:43: warning: ISO C forbids passing argument 8 of 'BlastHashLookupIndexQueryExactMatches' between function pointer and 'void *' [-Wpedantic]
lookup->hash_callback,
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/core/blast_nalookup.h:36:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nalookup.c:31:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/core/blast_lookup.h:174:6: note: expected 'TNaLookupHashFunction {aka unsigned int (*)(unsigned char *, unsigned int)}' but argument is of type 'void *'
void BlastHashLookupIndexQueryExactMatches(BackboneCell *backbone,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c: In function 's_NaChooseScanSubject':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:291:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastNaScanSubject_8_4;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:293:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastNaScanSubject_Any;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c: In function 's_SmallNaChooseScanSubject':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1320:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_4_1;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1322:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_Any;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1327:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_5_1;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1329:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_Any;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1334:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_6_1;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1336:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_6_2;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1338:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_Any;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1343:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_7_1;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1345:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_7_2;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1347:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_7_3;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1349:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_Any;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1354:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_8_4;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1360:33: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
(void *)s_BlastSmallNaScanSubject_Any;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1364:33: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
(void *)s_BlastSmallNaScanSubject_8_1Mod4;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1368:33: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
(void *)s_BlastSmallNaScanSubject_8_2Mod4;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1372:33: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
(void *)s_BlastSmallNaScanSubject_8_3Mod4;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c: In function 's_MBChooseScanSubject':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2620:24: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
(void *)s_MB_DiscWordScanSubject_TwoTemplates_1;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2622:39: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MB_DiscWordScanSubject_11_18_1;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2624:39: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MB_DiscWordScanSubject_11_21_1;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2626:39: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MB_DiscWordScanSubject_1;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2634:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MBScanSubject_9_1;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2636:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MBScanSubject_9_2;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2638:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MBScanSubject_Any;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2643:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MBScanSubject_10_1;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2645:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MBScanSubject_10_2;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2647:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MBScanSubject_10_3;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2649:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MBScanSubject_Any;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2655:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MBScanSubject_Any;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2658:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MBScanSubject_11_1Mod4;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2661:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MBScanSubject_11_2Mod4;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2664:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MBScanSubject_11_3Mod4;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2676:39: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
mb_lt->scansub_callback = (void *)s_MBScanSubject_Any;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c: In function 's_BlastNaHashLookupRetieveHits':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2705:9: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
(TNaLookupHashFunction)lookup->hash_callback;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c: In function 's_NaHashChooseScanSubject':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2978:32: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup->scansub_callback = (void*)s_BlastNaHashScanSubject_Any;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c: In function 'BlastChooseNucleotideScanSubjectAny':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2997:16: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
return (void *)s_BlastNaScanSubject_Any;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:3000:16: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
return (void *)s_BlastSmallNaScanSubject_Any;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:3003:16: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
return (void*)s_BlastNaHashScanSubject_Any;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:3006:12: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
return (void *)s_MBScanSubject_Any;
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_url.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/ncbi_url.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/cgi/cgi_util.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/cgi/cgi_util.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/cgi/cgi_serial.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/typeinfo.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/impl/ptrinfo.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/impl/aliasinfo.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/aliasinfo.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/objistr.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
LE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_aascan.c -o blast_aascan.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nalookup.c -o blast_nalookup.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c -o blast_nascan.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_message.c -o blast_message.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_options.c -o blast_options.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_psi.c -o blast_psi.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-b/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c: In function 's_IsSeedMasked':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:488:15: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
return !(((T_Lookup_Callback)(lookup_wrap->lookup_callback))
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c: In function 'BlastNaWordFinder':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1622:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TNaScanSubjectFunction)lookup->scansub_callback;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1623:18: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
extend = (TNaExtendFunction)lookup->extend_callback;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1635:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TNaScanSubjectFunction)lookup->scansub_callback;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1636:18: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
extend = (TNaExtendFunction)lookup->extend_callback;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1643:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TNaScanSubjectFunction)lookup->scansub_callback;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1644:18: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
extend = (TNaExtendFunction)lookup->extend_callback;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1657:23: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TNaScanSubjectFunction)
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c: In function 'MB_IndexedWordFinder':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1723:9: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
(T_MB_IdbCheckOid)lookup_wrap->check_index_oid;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1725:25: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
(T_MB_IdbGetResults)lookup_wrap->read_indexed_db;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c: In function 'BlastChooseNaExtend':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1795:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup_wrap->lookup_callback = (void *)s_MBLookup;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1799:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lut->extend_callback = (void *)s_BlastNaExtendDirect;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1802:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lut->extend_callback = (void *)s_BlastNaExtendAligned;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1804:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lut->extend_callback = (void *)s_BlastNaExtend;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1808:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup_wrap->lookup_callback = (void *)s_SmallNaLookup;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1812:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lut->extend_callback = (void *)s_BlastNaExtendDirect;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1816:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lut->extend_callback = (void *)s_BlastSmallNaExtendAlignedOneByte;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1818:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lut->extend_callback = (void *)s_BlastSmallNaExtend;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1825:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lookup_wrap->lookup_callback = (void *)s_NaLookup;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1829:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lut->extend_callback = (void *)s_BlastNaExtendDirect;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1832:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lut->extend_callback = (void *)s_BlastNaExtendAligned;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1834:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic]
lut->extend_callback = (void *)s_BlastNaExtend;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c: In function 'JumperNaWordFinder':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1974:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TNaScanSubjectFunction)lookup->scansub_callback;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1986:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TNaScanSubjectFunction)lookup->scansub_callback;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1994:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TNaScanSubjectFunction)lookup->scansub_callback;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:2001:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TNaScanSubjectFunction)lookup->scansub_callback;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:2014:23: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
scansub = (TNaScanSubjectFunction)
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c: In function 'ShortRead_IndexedWordFinder':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:2188:9: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
(T_MB_IdbCheckOid)lookup_wrap->check_index_oid;
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:2190:25: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic]
(T_MB_IdbGetResults)lookup_wrap->read_indexed_db;
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/cgi/cgi_session.cpp:32:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/cgi/cgi_exception.hpp:39:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/cgi/cgi_exception.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/plugin_manager.hpp:70,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/plugin_manager_store.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/cgi/cgiapp_cached.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/stream_utils.hpp:45:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/cgi/ncbicgi.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/cgi/impl/cgi_entry_reader.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/cgi/cgi_entry_reader.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
last+-2.7.1/c++/src/algo/blast/core/na_ungapped.c -o na_ungapped.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_psi_priv.c -o blast_psi_priv.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_seg.c -o blast_seg.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_seqsrc.c -o blast_seqsrc.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_setup.c -o blast_setup.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_stat.c -o blast_stat.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_traceback.c -o blast_traceback.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/us/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_util.c: In function 'BlastProgram2Number':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_util.c:306:10: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
else if (strcasecmp("mapper", program) == 0)
^~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_util.c:309:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
return 0;
^~~~~~
r/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_util.c -o blast_util.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/gapinfo.c -o gapinfo.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/greedy_align.c -o greedy_align.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/hspfilter_collector.c -o hspfilter_collector.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/hspfilter_besthit.c -o hspfilter_besthit.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/hspfilter_culling.c -o hspfilter_culling.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIF/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/link_hsps.c: In function 's_FwdCompareHSPs':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/link_hsps.c:133:10: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
else if (h1->context > h2->context)
^~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/link_hsps.c:136:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
if (h1->query.offset < h2->query.offset)
^~
-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/cgi/cgi_run.cpp -o cgi_run.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/cgi/cgi_util.cpp -o cgi_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/cgi/cgi_serial.cpp -o cgi_serial.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/cgi/cgi_session.cpp -o cgi_session.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/cgi/cgi_exception.cpp -o cgi_exception.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/cgi/cgiapp_cached.cpp -o cgiapp_cached.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/cgi/cgi_entry_reader.cpp -o cgi_entry_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/link_hsps.c -o link_hsps.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/lookup_util.c -o lookup_util.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/lookup_wrap.c -o lookup_wrap.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/matrix_freq_ratios.c -o matrix_freq_ratios.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/ncbi_std.c -o ncbi_std.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/ncbi_math.c -o ncbi_math.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_encodiIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/objostr.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/version.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/cgi/user_agent.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/cgi/user_agent.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/objcopy.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ng.c -o blast_encoding.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/pattern.c -o pattern.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/phi_extend.c -o phi_extend.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/phi_gapalign.c -o phi_gapalign.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/phi_lookup.c -o phi_lookup.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_parameters.c -o blast_parameters.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_posit.c -o blast_posit.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-mpile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/variant.cpp -o variant.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/choice.cpp -o choice.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/choiceptr.cpp -o choiceptr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/aliasinfo.cpp -o aliasinfo.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/objistr.cpp -o objistr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/objostr.cpp -o objostr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/objcopy.cpp -o objcopy.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_program.c -o blast_program.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_query_info.c -o blast_query_info.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_tune.c -o blast_tune.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_sw.c -o blast_sw.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_dynarray.c -o blast_dynarray.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/split_query.c -o split_query.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/iterator.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/gencode_singleton.c -o gencode_singleton.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/index_ungapped.c -o index_ungapped.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_traceback_mt_priv.c -o blast_traceback_mt_priv.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_hspstream_mt_utils.c -o blast_hspstream_mt_utils.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/boost_erf.c -o boost_erf.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/jumper.c -o jumper.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/hspfilter_mapper.c -o hspfilteIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/serial.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
r_mapper.o
/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/core/spliced_hits.c -o spliced_hits.o
/bin/rm -f libblast.so .libblast.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libblast.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC aa_ungapped.o blast_diagnostics.o blast_engine.o blast_extend.o blast_filter.o blast_gapalign.o blast_hits.o blast_hspstream.o blast_itree.o blast_kappa.o blast_lookup.o blast_aalookup.o blast_aascan.o blast_nalookup.o blast_nascan.o blast_message.o blast_options.o blast_psi.o na_ungapped.o blast_psi_priv.o blast_seg.o blast_seqsrc.o blast_setup.o blast_stat.o blast_traceback.o blast_util.o gapinfo.o greedy_align.o hspfilter_collector.o hspfilter_besthit.o hspfilter_culling.o link_hsps.o lookup_util.o lookup_wrap.o matrix_freq_ratios.o ncbi_std.o ncbi_math.o blast_encoding.o pattern.o phi_extend.o phi_gapalign.o phi_lookup.o blast_parameters.o blast_posit.o blast_program.o blast_query_info.o blast_tune.o blast_sw.o blast_dynarray.o split_query.o gencode_singleton.o index_ungapped.o blast_traceback_mt_priv.o blast_hspstream_mt_utils.o boost_erf.o jumper.o hspfilter_mapper.o spliced_hits.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lcomposition_adjustment -lxconnect -ltables -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libblast.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libblast.so
/bin/ln -f .blast.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.blast.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core'
FSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/cgi/user_agent.cpp -o user_agent.o
/bin/rm -f libxcgi.so .libxcgi.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxcgi.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC ncbicgi.o cgiapp.o cgictx.o ncbicgir.o ncbires.o ref_args.o cgi_run.o cgi_util.o cgi_serial.o cgi_session.o cgi_exception.o cgiapp_cached.o cgi_entry_reader.o user_agent.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcgi.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxcgi.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libxcgi.so
/bin/ln -f .xcgi.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.xcgi.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/cgi'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/cgi'
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/delaybuf.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialdef.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/objhook.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/pack_string.hpp:33,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/pack_string.cpp:32:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/exception.hpp:34,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/exception.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/iterator.cpp -o iterator.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/serial.cpp -o serial.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/delaybuf.cpp -o delaybuf.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/pack_string.cpp -o pack_string.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/exception.cpp -o exception.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/objhook.cpp -o objhook.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/oIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/objhook.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/objlist.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/objstack.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/objostrasn.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/objistrasn.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/objostrasnb.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/objistrasnb.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/objostrxml.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
bjlist.cpp -o objlist.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/objstack.cpp -o objstack.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/objostrasn.cpp -o objostrasn.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/objistrasn.cpp -o objistrasn.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/objostrasnb.cpp -o objostrasnb.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/objistrasnb.cpp -o objistrasnb.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/objostrxml.cpp -o objostrxml.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUIIn file included from /usr/include/c++/7/vector:69:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/objistrasnb.cpp:34:
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long int&}; _Tp = long long int; _Alloc = std::allocator<long long int>]':
/usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector<long long int>::iterator {aka __gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:64:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/objistrasnb.cpp:34:
/usr/include/c++/7/bits/stl_vector.h: In member function 'void ncbi::CObjectIStreamAsnBinary::ExpectIndefiniteLength()':
/usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/objistrxml.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/objostrjson.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/objistrjson.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serializable.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/serializable.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_safe_static.hpp:48,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/serialobject.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/impl/pathhook.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/pathhook.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/rpcbase.cpp:33:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
LD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/objistrxml.cpp -o objistrxml.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/objostrjson.cpp -o objostrjson.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/objistrjson.cpp -o objistrjson.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/serializable.cpp -o serializable.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/serialobject.cpp -o serialobject.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/pathhook.cpp -o pathhook.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/rpcbase.cpp -o rpcbase.o
/bin/rm -f libxser.so .libxser.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxser.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC hookdata.o hookdatakey.o typeinfo.o objectinfo.o objectiter.o objectio.o typeref.o typemap.o stdtypes.o enumerated.o ptrinfo.o autoptrinfo.o continfo.o stltypes.o memberid.o memberlist.o item.o classinfob.o member.o classinfo.o variant.o choice.o choiceptr.o aliasinfo.o objistr.o objostr.o objcopy.o iterator.o serial.o delaybuf.o pack_string.o exception.o objhook.o objlist.o objstack.o objostrasn.o objistrasn.o objostrasnb.o objistrasnb.o objostrxml.o objistrxml.o objostrjson.o objistrjson.o serializable.o serialobject.o pathhook.o rpcbase.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxser.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxser.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libxser.so
/bin/ln -f .xser.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.xser.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/serial'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/serial'
cd serial/datatool/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=datatool LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/serial/datatool'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool TMPL=datatool -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/namespace.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/type.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/type.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/statictype.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/datatool.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/statictype.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/type.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/type.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/datatool.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/type.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/enumtype.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/enumtype.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/serial/datatool'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/datatool.cpp -o datatool.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/type.cpp -o type.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/namespace.cpp -o namespace.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/statictype.cpp -o statictype.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/enumtype.cpp -o enumtype.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/reftype.cpp -o reftype.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/type.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/reftype.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/reftype.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/type.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/reftype.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/reftype.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/impl/stltypes.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/unitype.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/impl/stltypes.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/unitype.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/blocktype.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/blocktype.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/choicetype.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/choicetype.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/typestr.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/typestr.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/typestr.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/ptrstr.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/ptrstr.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/typestr.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/stdstr.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/stdstr.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
IFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/unitype.cpp -o unitype.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/blocktype.cpp -o blocktype.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/choicetype.cpp -o choicetype.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/typestr.cpp -o typestr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/ptrstr.cpp -o ptrstr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/stdstr.cpp -o stdstr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/classstr.cpp -o classstr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstaIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/datatool.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/classstr.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/datatool.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/classstr.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/typestr.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/enumstr.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/enumstr.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/stlstr.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/stlstr.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/choicestr.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/choicestr.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/choiceptrstr.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/value.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/value.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/mcontainer.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/mcontainer.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ck-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/enumstr.cpp -o enumstr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/stlstr.cpp -o stlstr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/choicestr.cpp -o choicestr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/choiceptrstr.cpp -o choiceptrstr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/value.cpp -o value.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/mcontainer.cpp -o mcontainer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/module.cpp -o module.o
/usr/bin/g++ -std=gnu++11 -c -WaIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/module.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/moduleset.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/module.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/generate.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/filecode.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/moduleset.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/generate.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/filecode.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/code.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/code.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/fileutil.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ll -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/moduleset.cpp -o moduleset.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/generate.cpp -o generate.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/filecode.cpp -o filecode.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/code.cpp -o code.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/fileutil.cpp -o fileutil.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/alexer.cpp -o alexer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/alexer.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/aparser.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/alexer.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/aparser.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/parser.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/parser.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/alexer.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/lexer.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/lexer.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/comments.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.cpp:66:50: note: in expansion of macro 'THROWS'
CDataType* CResolvedTypeSet::GetType(void) const THROWS((CDatatoolException))
^~~~~~
-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/aparser.cpp -o aparser.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/parser.cpp -o parser.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/lexer.cpp -o lexer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.cpp -o exceptions.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/comments.cpp -o comments.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/srcutil.cpp -o srcutil.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/dtdaux.cpp -o dtdaux.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/srcutil.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/dtdaux.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/dtdaux.cpp:38:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/alexer.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/dtdlexer.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/dtdlexer.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/dtdparser.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/dtdparser.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/rpcgen.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/aliasstr.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/rpcgen.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/aliasstr.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/alexer.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/dtdlexer.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/xsdlexer.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/xsdlexer.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/xsdparser.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/xsdparser.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
IFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/dtdlexer.cpp -o dtdlexer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/dtdparser.cpp -o dtdparser.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/rpcgen.cpp -o rpcgen.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/aliasstr.cpp -o aliasstr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/xsdlexer.cpp -o xsdlexer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/xsdparser.cpp -o xsdparser.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/wsdllexer.cpp -o wsdllexer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.speIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/alexer.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/dtdlexer.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/xsdlexer.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/wsdllexer.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/wsdllexer.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/wsdlparser.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/wsdlparser.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/wsdlstr.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/wsdlstr.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/alexer.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/dtdlexer.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/jsdlexer.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/jsdlexer.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/jsdparser.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/jsdparser.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro 'THROWS'
CDataType* GetType(void) const THROWS((CDatatoolException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/traversal_pattern_match_callback.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/traversal_pattern_match_callback.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/traversal_code_generator.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/wsdlparser.cpp -o wsdlparser.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/wsdlstr.cpp -o wsdlstr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/jsdlexer.cpp -o jsdlexer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/jsdparser.cpp -o jsdparser.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/traversal_pattern_match_callback.cpp -o traversal_pattern_match_callback.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/traversal_code_generator.cpp -o traversal_code_generator.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blastIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/traversal_node.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/traversal_merger.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/traversal_merger.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/typestr.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/aliasstr.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/traversal_node.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/traversal_spec_file_parser.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/traversal_spec_file_parser.cpp:187:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+-2.7.1/c++/src/serial/datatool/traversal_merger.cpp -o traversal_merger.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/traversal_node.cpp -o traversal_node.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/serial/datatool/traversal_spec_file_parser.cpp -o traversal_spec_file_parser.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie datatool.o type.o namespace.o statictype.o enumtype.o reftype.o unitype.o blocktype.o choicetype.o typestr.o ptrstr.o stdstr.o classstr.o enumstr.o stlstr.o choicestr.o choiceptrstr.o value.o mcontainer.o module.o moduleset.o generate.o filecode.o code.o fileutil.o alexer.o aparser.o parser.o lexer.o exceptions.o comments.o srcutil.o dtdaux.o dtdlexer.o dtdparser.o rpcgen.o aliasstr.o xsdlexer.o xsdparser.o wsdllexer.o wsdlparser.o wsdlstr.o jsdlexer.o jsdparser.o traversal_pattern_match_callback.o traversal_code_generator.o traversal_merger.o traversal_node.o traversal_spec_file_parser.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lxser -lxutil -lxncbi -ldl -lm -lpthread -o datatool
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f datatool /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f datatool /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/serial/datatool'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/serial/datatool'
cd objects/general/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
cd objects/biblio/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
cd objects/medline/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
cd objects/pub/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general'
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio'
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline'
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub'
cd /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general && /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh general all
cd /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/biblio && /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh biblio all
cd /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/pub && /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh pub all
cd /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/medline && /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh medline all
Platform not defined for Linux armv8l -- please fix me
Platform not defined for Linux armv8l -- please fix me
Platform not defined for Linux armv8l -- please fix me
Platform not defined for Linux armv8l -- please fix me
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=pub MODULE_PATH=objects/pub MODULE_ASN=pub.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline' IMPDEPS='/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/pub'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m pub.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn" -oA -oc pub -or objects/pub -odi -od pub.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd pub.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/pub'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=general MODULE_PATH=objects/general MODULE_ASN=general.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m general.asn -M "" -oA -oc general -or objects/general -odi -od general.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd general.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=medline MODULE_PATH=objects/medline MODULE_ASN=medline.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio' IMPDEPS='/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/medline'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m medline.asn -M "objects/general/general.asn objects/biblio/biblio.asn" -oA -oc medline -or objects/medline -odi -od medline.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd medline.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/medline'
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/pub'
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general'
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/pub'
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/medline'
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general'
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/medline'
/usr/bin/make[4] (Makefile.pub.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub'
cd objects/seqcode/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
/usr/bin/make[4] (Makefile.general.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.medline.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline'
cd objects/seq/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
cd objects/seqset/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode'
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=biblio MODULE_PATH=objects/biblio MODULE_ASN=biblio.asn MODULE_IMPORT='objects/general/general' IMPDEPS='/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn' IMPFILES='objects/general/general.asn' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/biblio'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m biblio.asn -M "objects/general/general.asn" -oA -oc biblio -or objects/biblio -odi -od biblio.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd biblio.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/biblio'
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/biblio'
cd /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqcode && /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh seqcode all
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/biblio'
cd /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqset && /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh seqset all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
/usr/bin/make[4] (Makefile.biblio.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio'
cd objects/scoremat/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat'
cd /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/scoremat && /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh scoremat all
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/Makefile.sources builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq -w -j --jobserver-fds=3,4 all
Platform not defined for Linux armv8l -- please fix me
Platform not defined for Linux armv8l -- please fix me
Platform not defined for Linux armv8l -- please fix me
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqcode MODULE_PATH=objects/seqcode MODULE_ASN=seqcode.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqcode'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m seqcode.asn -M "" -oA -oc seqcode -or objects/seqcode -odi -od seqcode.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqcode.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqcode'
Platform not defined for Linux armv8l -- please fix me
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqcode'
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqcode'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqset MODULE_PATH=objects/seqset MODULE_ASN=seqset.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seq/seq' IMPDEPS='/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqset'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m seqset.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seq/seq.asn" -oA -oc seqset -or objects/seqset -odi -od seqset.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqset.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqset'
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqset'
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqset'
/usr/bin/make[4] (Makefile.seqcode.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode'
cd objects/blast/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
/usr/bin/make[4] (Makefile.seqset.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset'
cd objects/blastdb/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb'
cd /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blast && /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh blast all
cd /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blastdb && /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh blastdb all
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=scoremat MODULE_PATH=objects/scoremat MODULE_ASN=scoremat.asn MODULE_IMPORT='objects/seqset/seqset objects/general/general' IMPDEPS='/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn' IMPFILES='objects/seqset/seqset.asn objects/general/general.asn' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/scoremat'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m scoremat.asn -M "objects/seqset/seqset.asn objects/general/general.asn" -oA -oc scoremat -or objects/scoremat -odi -od scoremat.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd scoremat.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/scoremat'
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/scoremat'
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/scoremat'
Platform not defined for Linux armv8l -- please fix me
/usr/bin/make[4] (Makefile.scoremat.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat'
cd objects/genomecoll/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll'
Platform not defined for Linux armv8l -- please fix me
cd /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/genomecoll && /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh genome_collection all
Platform not defined for Linux armv8l -- please fix me
Platform not defined for Linux armv8l -- please fix me
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=blastdb MODULE_PATH=objects/blastdb MODULE_ASN=blastdb.asn MODULE_IMPORT='objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blastdb'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m blastdb.asn -M "objects/seqloc/seqloc.asn" -oA -oc blastdb -or objects/blastdb -odi -od blastdb.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd blastdb.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blastdb'
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blastdb'
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blastdb'
/usr/bin/make[4] (Makefile.blastdb.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb'
cd objects/seqedit/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit'
cd /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqedit && /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh seqedit all
Platform not defined for Linux armv8l -- please fix me
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
status=0 ; \
MAKE="/usr/bin/make -w -j --jobserver-fds=3,4"; \
export MAKE; \
for x in seqalign seqblock seqfeat seqloc seqres seqtable; do \
d=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../$x ; \
(cd $d && /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh) || status=9 ; \
test -f ${x}__.cpp || \
echo "#include \"../$x/${x}__.cpp\"" > ${x}__.cpp ; \
test -f ${x}___.cpp || \
echo "#include \"../$x/${x}___.cpp\"" > ${x}___.cpp ; \
done ; \
exit $status
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqalign MODULE_PATH=objects/seqalign MODULE_ASN=seqalign.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src
make[7]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqalign'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m seqalign.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn" -oA -oc seqalign -or objects/seqalign -odi -od seqalign.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqalign.dump
datatool: 2.17.0
make[7]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqalign'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqblock MODULE_PATH=objects/seqblock MODULE_ASN=seqblock.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src
make[7]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqblock'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m seqblock.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn" -oA -oc seqblock -or objects/seqblock -odi -od seqblock.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqblock.dump
datatool: 2.17.0
make[7]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqblock'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqfeat MODULE_PATH=objects/Platform not defined for Linux armv8l -- please fix me
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=genome_collection MODULE_PATH=objects/genomecoll MODULE_ASN=genome_collection.asn MODULE_IMPORT='objects/general/general objects/seqloc/seqloc objects/seqfeat/seqfeat objects/seq/seq' IMPDEPS='/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/seqloc/seqloc.asn objects/seqfeat/seqfeat.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/genomecoll'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m genome_collection.asn -M "objects/general/general.asn objects/seqloc/seqloc.asn objects/seqfeat/seqfeat.asn objects/seq/seq.asn" -oA -oc genome_collection -or objects/genomecoll -odi -od genome_collection.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd genome_collection.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/genomecoll'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=blast MODULE_PATH=objects/blast MODULE_ASN=blast.asn MODULE_IMPORT='objects/scoremat/scoremat objects/seq/seq objects/seqset/seqset objects/seqloc/seqloc objects/seqalign/seqalign' IMPDEPS='/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/scoremat/scoremat.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqalign/seqalign.asn' IMPFILES='objects/scoremat/scoremat.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn objects/seqalign/seqalign.asn' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blast'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m blast.asn -M "objects/scoremat/scoremat.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn objects/seqalign/seqalign.asn" -oA -oc blast -or objects/blast -odi -od blast.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd blast.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blast'
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/genomecoll'
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/genomecoll'
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blast'
cd /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/genomecoll && /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh gencoll_client all
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blast'
Waiting for /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/genomecoll/make_asn.lock/usr/bin/make[4] (Makefile.blast.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.xnetblastcli.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
cd objects/seqsplit/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit'
cd /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqsplit && /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh seqsplit all
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqedit MODULE_PATH=objects/seqedit MODULE_ASN=seqedit.asn MODULE_IMPORT='objects/general/general objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq objects/seqalign/seqalign objects/seqfeat/seqfeat objects/seqres/seqres' IMPDEPS='/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqalign/seqalign.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqres/seqres.asn' IMPFILES='objects/general/general.asn objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqedit'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m seqedit.asn -M "objects/general/general.asn objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn" -oA -oc seqedit -or objects/seqedit -odi -od seqedit.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqedit.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqedit'
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqedit'
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqedit'
Platform not defined for Linux armv8l -- please fix me
/usr/bin/make[4] (Makefile.seqedit.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit'
cd objects/submit/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit'
cd /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/submit && /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh submit all
Platform not defined for Linux armv8l -- please fix me
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqsplit MODULE_PATH=objects/seqsplit MODULE_ASN=seqsplit.asn MODULE_IMPORT='objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq objects/seqalign/seqalign objects/seqfeat/seqfeat' IMPDEPS='/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqalign/seqalign.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqsplit'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m seqsplit.asn -M "objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn" -oA -oc seqsplit -or objects/seqsplit -odi -od seqsplit.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqsplit.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqsplit'
Platform not defined for Linux armv8l -- please fix me
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqsplit'
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqsplit'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=submit MODULE_PATH=objects/submit MODULE_ASN=submit.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/seq/seq objects/seqset/seqset objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/submit'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m submit.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn" -oA -oc submit -or objects/submit -odi -od submit.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd submit.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/submit'
/usr/bin/make[4] (Makefile.seqsplit.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit'
cd objects/variation/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation'
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/submit'
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/submit'
cd /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/variation && /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh variation all
/usr/bin/make[4] (Makefile.submit.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit'
cd objects/id1/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1'
cd /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/id1 && /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh id1 all
Platform not defined for Linux armv8l -- please fix me
Platform not defined for Linux armv8l -- please fix me
Platform not defined for Linux armv8l -- please fix me
seqfeat MODULE_ASN=seqfeat.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/pub/pub objects/seqloc/seqloc objects/seq/seq' IMPDEPS='/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/pub/pub.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/pub/pub.asn objects/seqloc/seqloc.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src
make[7]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqfeat'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m seqfeat.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/pub/pub.asn objects/seqloc/seqloc.asn objects/seq/seq.asn" -oA -oc seqfeat -or objects/seqfeat -odi -od seqfeat.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqfeat.dump
datatool: 2.17.0
make[7]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqfeat'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqloc MODULE_PATH=objects/seqloc MODULE_ASN=seqloc.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/seqfeat/seqfeat' IMPDEPS='/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/seqfeat/seqfeat.asn' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src
make[7]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqloc'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m seqloc.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/seqfeat/seqfeat.asn" -oA -oc seqloc -or objects/seqloc -odi -od seqloc.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqloc.dump
datatool: 2.17.0
make[7]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqloc'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqres MODULE_PATH=objects/seqres MODULE_ASN=seqres.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/n/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=variation MODULE_PATH=objects/variation MODULE_ASN=variation.asn MODULE_IMPORT='objects/seqfeat/seqfeat objects/general/general objects/seqloc/seqloc objects/pub/pub objects/seq/seq' IMPDEPS='/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/pub/pub.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn' IMPFILES='objects/seqfeat/seqfeat.asn objects/general/general.asn objects/seqloc/seqloc.asn objects/pub/pub.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/variation'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m variation.asn -M "objects/seqfeat/seqfeat.asn objects/general/general.asn objects/seqloc/seqloc.asn objects/pub/pub.asn objects/seq/seq.asn" -oA -oc variation -or objects/variation -odi -od variation.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd variation.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/variation'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=id1 MODULE_PATH=objects/id1 MODULE_ASN=id1.asn MODULE_IMPORT='objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq' IMPDEPS='/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn' IMPFILES='objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/id1'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m id1.asn -M "objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn" -oA -oc id1 -or objects/id1 -odi -od id1.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd id1.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/id1'
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/variation'
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/id1'
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/variation'
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/id1'
Platform not defined for Linux armv8l -- please fix me
/usr/bin/make[4] (Makefile.variation.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation'
cd objects/id2/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
/usr/bin/make[4] (Makefile.id1.lib): Nothing to be done for `export-headers'.
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2'
cd /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/id2 && /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh id2 all
/usr/bin/make[4] (Makefile.id1cli.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1'
cd objects/taxon1/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1'
Platform not defined for Linux armv8l -- please fix me
cbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src
make[7]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqres'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m seqres.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn" -oA -oc seqres -or objects/seqres -odi -od seqres.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqres.dump
datatool: 2.17.0
make[7]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqres'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqtable MODULE_PATH=objects/seqtable MODULE_ASN=seqtable.asn MODULE_IMPORT='objects/general/general objects/seq/seq objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/seq/seq.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src
make[7]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqtable'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m seqtable.asn -M "objects/general/general.asn objects/seq/seq.asn objects/seqloc/seqloc.asn" -oA -oc seqtable -or objects/seqtable -odi -od seqtable.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqtable.dump
datatool: 2.17.0
make[7]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqtable'
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
cd /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/taxon1 && /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh taxon1 all
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
cd /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq && /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh seq all
Platform not defined for Linux armv8l -- please fix me
Platform not defined for Linux armv8l -- please fix me
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=id2 MODULE_PATH=objects/id2 MODULE_ASN=id2.asn MODULE_IMPORT='objects/seqsplit/seqsplit objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqsplit/seqsplit.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/seqsplit/seqsplit.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/id2'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m id2.asn -M "objects/seqsplit/seqsplit.asn objects/seqloc/seqloc.asn" -oA -oc id2 -or objects/id2 -odi -od id2.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd id2.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/id2'
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/id2'
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/id2'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=taxon1 MODULE_PATH=objects/taxon1 MODULE_ASN=taxon1.asn MODULE_IMPORT='objects/seqfeat/seqfeat' IMPDEPS='/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqfeat/seqfeat.asn' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/taxon1'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m taxon1.asn -M "objects/seqfeat/seqfeat.asn" -oA -oc taxon1 -or objects/taxon1 -odi -od taxon1.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd taxon1.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/taxon1'
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/taxon1'
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/taxon1'
/usr/bin/make[4] (Makefile.id2.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.taxon1.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1'
cd objects/blastxml/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml'
/usr/bin/make[4] (Makefile.id2cli.lib): Nothing to be done for `export-headers'.
cd /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blastxml && /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh blastxml all
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2'
cd objects/blastxml2/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2'
cd /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blastxml2 && /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh blastxml2 all
Platform not defined for Linux armv8l -- please fix me
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seq MODULE_PATH=objects/seq MODULE_ASN=seq.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/pub/pub objects/medline/medline objects/seqloc/seqloc objects/seqblock/seqblock objects/seqalign/seqalign objects/seqfeat/seqfeat objects/seqres/seqres objects/seqtable/seqtable' IMPDEPS='/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/pub/pub.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqblock/seqblock.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqalign/seqalign.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqres/seqres.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqtable/seqtable.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/pub/pub.asn objects/medline/medline.asn objects/seqloc/seqloc.asn objects/seqblock/seqblock.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn objects/seqtable/seqtable.asn' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m seq.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/pub/pub.asn objects/medline/medline.asn objects/seqloc/seqloc.asn objects/seqblock/seqblock.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn objects/seqtable/seqtable.asn" -oA -oc seq -or objects/seq -odi -od seq.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seq.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq'
Platform not defined for Linux armv8l -- please fix me
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq'
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq'
File blastxml.module not found. Using defaults...
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=blastxml MODULE_PATH=objects/blastxml MODULE_ASN=blastxml.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blastxml'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m blastxml.asn -M "" -oA -oc blastxml -or objects/blastxml -odi -od blastxml.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd blastxml.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blastxml'
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blastxml'
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blastxml'
/usr/bin/make[4] (Makefile.seq.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
cd objects/entrez2/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
cd /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/entrez2 && /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh entrez2 all
/usr/bin/make[4] (Makefile.blastxml.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml'
cd objects/gbseq/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq'
cd /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/gbseq && /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh gbseq all
File blastxml2.module not found. Using defaults...
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=blastxml2 MODULE_PATH=objects/blastxml2 MODULE_ASN=blastxml2.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blastxml2'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m blastxml2.asn -M "" -oA -oc blastxml2 -or objects/blastxml2 -odi -od blastxml2.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd blastxml2.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blastxml2'
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blastxml2'
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blastxml2'
Platform not defined for Linux armv8l -- please fix me
/usr/bin/make[4] (Makefile.blastxml2.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2'
cd objects/medlars/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars'
Platform not defined for Linux armv8l -- please fix me
cd /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/medlars && /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh medlars all
Platform not defined for Linux armv8l -- please fix me
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=gbseq MODULE_PATH=objects/gbseq MODULE_ASN=gbseq.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/gbseq'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m gbseq.asn -M "" -oA -oc gbseq -or objects/gbseq -odi -od gbseq.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd gbseq.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/gbseq'
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/gbseq'
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/gbseq'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=entrez2 MODULE_PATH=objects/entrez2 MODULE_ASN=entrez2.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/entrez2'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m entrez2.asn -M "" -oA -oc entrez2 -or objects/entrez2 -odi -od entrez2.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd entrez2.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/entrez2'
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/entrez2'
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/entrez2'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=medlars MODULE_PATH=objects/medlars MODULE_ASN=medlars.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio' IMPDEPS='/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/medlars'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m medlars.asn -M "objects/general/general.asn objects/biblio/biblio.asn" -oA -oc medlars -or objects/medlars -odi -od medlars.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd medlars.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/medlars'
/usr/bin/make[4] (Makefile.gbseq.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq'
cd objects/pubmed/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/medlars'
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed'
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/medlars'
/usr/bin/make[4] (Makefile.entrez2.lib): Nothing to be done for `export-headers'.
cd /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/pubmed && /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh pubmed all
/usr/bin/make[4] (Makefile.medlars.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars'
cd objects/mla/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
/usr/bin/make[4] (Makefile.entrez2cli.lib): Nothing to be done for `export-headers'.
cd /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/mla && /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh mla all
Platform not defined for Linux armv8l -- please fix me
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
cd objects/taxon3/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3'
cd /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/taxon3 && /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh taxon3 all
Platform not defined for Linux armv8l -- please fix me
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=pubmed MODULE_PATH=objects/pubmed MODULE_ASN=pubmed.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline' IMPDEPS='/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/pubmed'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m pubmed.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn" -oA -oc pubmed -or objects/pubmed -odi -od pubmed.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd pubmed.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/pubmed'
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/pubmed'
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/pubmed'
Platform not defined for Linux armv8l -- please fix me
/usr/bin/make[4] (Makefile.pubmed.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed'
cd objects/valid/ && /usr/bin/make -w -j --jobserver-fds=3,4 sources
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=mla MODULE_PATH=objects/mla MODULE_ASN=mla.asn MODULE_IMPORT='objects/biblio/biblio objects/medline/medline objects/medlars/medlars objects/pubmed/pubmed objects/pub/pub' IMPDEPS='/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/medlars/medlars.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/pubmed/pubmed.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/pub/pub.asn' IMPFILES='objects/biblio/biblio.asn objects/medline/medline.asn objects/medlars/medlars.asn objects/pubmed/pubmed.asn objects/pub/pub.asn' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/mla'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m mla.asn -M "objects/biblio/biblio.asn objects/medline/medline.asn objects/medlars/medlars.asn objects/pubmed/pubmed.asn objects/pub/pub.asn" -oA -oc mla -or objects/mla -odi -od mla.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd mla.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/mla'
cd /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/valid && /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh valid all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/mla'
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/mla'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=taxon3 MODULE_PATH=objects/taxon3 MODULE_ASN=taxon3.asn MODULE_IMPORT='objects/seqfeat/seqfeat' IMPDEPS='/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqfeat/seqfeat.asn' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/taxon3'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m taxon3.asn -M "objects/seqfeat/seqfeat.asn" -oA -oc taxon3 -or objects/taxon3 -odi -od taxon3.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd taxon3.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/taxon3'
/usr/bin/make[4] (Makefile.mla.lib): Nothing to be done for `export-headers'.
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/taxon3'
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/taxon3'
Platform not defined for Linux armv8l -- please fix me
/usr/bin/make[4] (Makefile.mlacli.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.taxon3.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3'
cd objects/general/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=general UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
cd objects/seqcode/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=seqcode UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=valid MODULE_PATH=objects/valid MODULE_ASN=valid.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/valid'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m valid.asn -M "" -oA -oc valid -or objects/valid -odi -od valid.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd valid.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/valid'
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/valid'
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/valid'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general TMPL=general -w -j --jobserver-fds=3,4 all
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqcode TMPL=seqcode -w -j --jobserver-fds=3,4 all
/usr/bin/make[4] (Makefile.valid.lib): Nothing to be done for `export-headers'.
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid'
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqcode/Seq_code_set_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqcode/Seq_code_set.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqcode/Seq_code_set.cpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqcode/seqcode__.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general/Date_.cpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general/general___.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/general/Date_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/general/Date.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general/Date.cpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general/general__.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=general MODULE_PATH=objects/general MODULE_ASN=general.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m general.asn -M "" -oA -oc general -or objects/general -odi -od general.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd general.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=medline MODULE_PATH=objects/medline MODULE_ASN=medline.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio' IMPDEPS='/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/medline'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m medline.asn -M "objects/general/general.asn objects/biblio/biblio.asn" -oA -oc medline -or objects/medline -odi -od medline.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd medline.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/medline'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=biblio MODULE_PATH=objects/biblio MODULE_ASN=biblio.asn MODULE_IMPORT='objects/general/general' IMPDEPS='/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn' IMPFILES='objects/general/general.asn' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/biblio'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m biblio.asn -M "objects/general/general.asn" -oA -oc biblio -or objects/biblio -odi -od biblio.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd biblio.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/biblio'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=pub MODULE_PATH=objects/pub MODULE_ASN=pub.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline' IMPDEPS='/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/pub'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m pub.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn" -oA -oc pub -or objects/pub -odi -od pub.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd pub.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/pub'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqcode MODULE_PATH=objects/seqcode MODULE_ASN=seqcode.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqcode'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m seqcode.asn -M "" -oA -oc seqcode -or objects/seqcode -odi -od seqcode.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqcode.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqcode'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqset MODULE_PATH=objects/seqset MODULE_ASN=seqset.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seq/seq' IMPDEPS='/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqset'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m seqset.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seq/seq.asn" -oA -oc seqset -or objects/seqset -odi -od seqset.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqset.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqset'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=scoremat MODULE_PATH=objects/scoremat MODULE_ASN=scoremat.asn MODULE_IMPORT='objects/seqset/seqset objects/general/general' IMPDEPS='/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn' IMPFILES='objects/seqset/seqset.asn objects/general/general.asn' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/scoremat'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m scoremat.asn -M "objects/seqset/seqset.asn objects/general/general.asn" -oA -oc scoremat -or objects/scoremat -odi -od scoremat.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd scoremat.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/scoremat'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=blast MODULE_PATH=objects/blast MODULE_ASN=blast.asn MODULE_IMPORT='objects/scoremat/scoremat objects/seq/seq objects/seqset/seqset objects/seqloc/seqloc objects/seqalign/seqalign' IMPDEPS='/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/scoremat/scoremat.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqalign/seqalign.asn' IMPFILES='objects/scoremat/scoremat.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn objects/seqalign/seqalign.asn' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blast'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m blast.asn -M "objects/scoremat/scoremat.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn objects/seqalign/seqalign.asn" -oA -oc blast -or objects/blast -odi -od blast.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd blast.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blast'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=blastdb MODULE_PATH=objects/blastdb MODULE_ASN=blastdb.asn MODULE_IMPORT='objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blastdb'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m blastdb.asn -M "objects/seqloc/seqloc.asn" -oA -oc blastdb -or objects/blastdb -odi -od blastdb.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd blastdb.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blastdb'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=genome_collection MODULE_PATH=objects/genomecoll MODULE_ASN=genome_collection.asn MODULE_IMPORT='objects/general/general objects/seqloc/seqloc objects/seqfeat/seqfeat objects/seq/seq' IMPDEPS='/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/seqloc/seqloc.asn objects/seqfeat/seqfeat.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/genomecoll'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m genome_collection.asn -M "objects/general/general.asn objects/seqloc/seqloc.asn objects/seqfeat/seqfeat.asn objects/seq/seq.asn" -oA -oc genome_collection -or objects/genomecoll -odi -od genome_collection.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd genome_collection.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/genomecoll'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqedit MODULE_PATH=objects/seqedit MODULE_ASN=seqedit.asn MODULE_IMPORT='objects/general/general objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq objects/seqalign/seqalign objects/seqfeat/seqfeat objects/seqres/seqres' IMPDEPS='/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqalign/seqalign.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqres/seqres.asn' IMPFILES='objects/general/general.asn objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqedit'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m seqedit.asn -M "objects/general/general.asn objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn" -oA -oc seqedit -or objects/seqedit -odi -od seqedit.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqedit.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqedit'
.
Acquired /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/genomecoll/make_asn.lock for PID 24213 (make_asn)
Platform not defined for Linux armv8l -- please fix me
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqsplit MODULE_PATH=objects/seqsplit MODULE_ASN=seqsplit.asn MODULE_IMPORT='objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq objects/seqalign/seqalign objects/seqfeat/seqfeat' IMPDEPS='/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqalign/seqalign.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqsplit'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m seqsplit.asn -M "objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn" -oA -oc seqsplit -or objects/seqsplit -odi -od seqsplit.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqsplit.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqsplit'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=gencoll_client MODULE_PATH=objects/genomecoll MODULE_ASN=gencoll_client.asn MODULE_IMPORT='objects/genomecoll/genome_collection' IMPDEPS='/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/genomecoll/genome_collection.asn' IMPFILES='objects/genomecoll/genome_collection.asn' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/genomecoll'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m gencoll_client.asn -M "objects/genomecoll/genome_collection.asn" -oA -oc gencoll_client -or objects/genomecoll -odi -od gencoll_client.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd gencoll_client.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/genomecoll'
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/genomecoll'
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/genomecoll'
/usr/bin/make[4] (Makefile.genome_collection.lib): Nothing to be done for `export-headers'.
/usr/bin/make[4] (Makefile.gencoll_client.lib): Nothing to be done for `export-headers'.
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=submit MODULE_PATH=objects/submit MODULE_ASN=submit.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/seq/seq objects/seqset/seqset objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/submit'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m submit.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn" -oA -oc submit -or objects/submit -odi -od submit.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd submit.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/submit'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll'
cd objects/blastxml/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=blastxml UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blastxml TMPL=blastxml -w -j --jobserver-fds=3,4 all
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=variation MODULE_PATH=objects/variation MODULE_ASN=variation.asn MODULE_IMPORT='objects/seqfeat/seqfeat objects/general/general objects/seqloc/seqloc objects/pub/pub objects/seq/seq' IMPDEPS='/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/pub/pub.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn' IMPFILES='objects/seqfeat/seqfeat.asn objects/general/general.asn objects/seqloc/seqloc.asn objects/pub/pub.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/variation'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m variation.asn -M "objects/seqfeat/seqfeat.asn objects/general/general.asn objects/seqloc/seqloc.asn objects/pub/pub.asn objects/seq/seq.asn" -oA -oc variation -or objects/variation -odi -od variation.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd variation.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/variation'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=id1 MODULE_PATH=objects/id1 MODULE_ASN=id1.asn MODULE_IMPORT='objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq' IMPDEPS='/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn' IMPFILES='objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/id1'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m id1.asn -M "objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn" -oA -oc id1 -or objects/id1 -odi -od id1.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd id1.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/id1'
cbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src
make[7]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqres'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m seqres.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn" -oA -oc seqres -or objects/seqres -odi -od seqres.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqres.dump
datatool: 2.17.0
make[7]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqres'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqtable MODULE_PATH=objects/seqtable MODULE_ASN=seqtable.asn MODULE_IMPORT='objects/general/general objects/seq/seq objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/seq/seq.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src
make[7]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqtable'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m seqtable.asn -M "objects/general/general.asn objects/seq/seq.asn objects/seqloc/seqloc.asn" -oA -oc seqtable -or objects/seqtable -odi -od seqtable.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqtable.dump
datatool: 2.17.0
make[7]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqtable'
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=id2 MODULE_PATH=objects/id2 MODULE_ASN=id2.asn MODULE_IMPORT='objects/seqsplit/seqsplit objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqsplit/seqsplit.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/seqsplit/seqsplit.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/id2'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m id2.asn -M "objects/seqsplit/seqsplit.asn objects/seqloc/seqloc.asn" -oA -oc id2 -or objects/id2 -odi -od id2.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd id2.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/id2'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=taxon1 MODULE_PATH=objects/taxon1 MODULE_ASN=taxon1.asn MODULE_IMPORT='objects/seqfeat/seqfeat' IMPDEPS='/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqfeat/seqfeat.asn' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/taxon1'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m taxon1.asn -M "objects/seqfeat/seqfeat.asn" -oA -oc taxon1 -or objects/taxon1 -odi -od taxon1.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd taxon1.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/taxon1'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seq MODULE_PATH=objects/seq MODULE_ASN=seq.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/pub/pub objects/medline/medline objects/seqloc/seqloc objects/seqblock/seqblock objects/seqalign/seqalign objects/seqfeat/seqfeat objects/seqres/seqres objects/seqtable/seqtable' IMPDEPS='/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/pub/pub.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqblock/seqblock.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqalign/seqalign.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqres/seqres.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqtable/seqtable.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/pub/pub.asn objects/medline/medline.asn objects/seqloc/seqloc.asn objects/seqblock/seqblock.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn objects/seqtable/seqtable.asn' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m seq.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/pub/pub.asn objects/medline/medline.asn objects/seqloc/seqloc.asn objects/seqblock/seqblock.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn objects/seqtable/seqtable.asn" -oA -oc seq -or objects/seq -odi -od seq.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seq.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq'
File blastxml.module not found. Using defaults...
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=blastxml MODULE_PATH=objects/blastxml MODULE_ASN=blastxml.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blastxml'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m blastxml.asn -M "" -oA -oc blastxml -or objects/blastxml -odi -od blastxml.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd blastxml.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blastxml'
File blastxml2.module not found. Using defaults...
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=blastxml2 MODULE_PATH=objects/blastxml2 MODULE_ASN=blastxml2.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blastxml2'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m blastxml2.asn -M "" -oA -oc blastxml2 -or objects/blastxml2 -odi -od blastxml2.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd blastxml2.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blastxml2'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=entrez2 MODULE_PATH=objects/entrez2 MODULE_ASN=entrez2.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/entrez2'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m entrez2.asn -M "" -oA -oc entrez2 -or objects/entrez2 -odi -od entrez2.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd entrez2.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/entrez2'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=gbseq MODULE_PATH=objects/gbseq MODULE_ASN=gbseq.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/gbseq'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m gbseq.asn -M "" -oA -oc gbseq -or objects/gbseq -odi -od gbseq.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd gbseq.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/gbseq'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=medlars MODULE_PATH=objects/medlars MODULE_ASN=medlars.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio' IMPDEPS='/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/medlars'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m medlars.asn -M "objects/general/general.asn objects/biblio/biblio.asn" -oA -oc medlars -or objects/medlars -odi -od medlars.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd medlars.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/medlars'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=pubmed MODULE_PATH=objects/pubmed MODULE_ASN=pubmed.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline' IMPDEPS='/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/pubmed'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m pubmed.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn" -oA -oc pubmed -or objects/pubmed -odi -od pubmed.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd pubmed.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/pubmed'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=mla MODULE_PATH=objects/mla MODULE_ASN=mla.asn MODULE_IMPORT='objects/biblio/biblio objects/medline/medline objects/medlars/medlars objects/pubmed/pubmed objects/pub/pub' IMPDEPS='/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/medlars/medlars.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/pubmed/pubmed.asn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/pub/pub.asn' IMPFILES='objects/biblio/biblio.asn objects/medline/medline.asn objects/medlars/medlars.asn objects/pubmed/pubmed.asn objects/pub/pub.asn' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/mla'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m mla.asn -M "objects/biblio/biblio.asn objects/medline/medline.asn objects/medlars/medlars.asn objects/pubmed/pubmed.asn objects/pub/pub.asn" -oA -oc mla -or objects/mla -odi -od mla.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd mla.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/mla'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=taxon3 MODULE_PATH=objects/taxon3 MODULE_ASN=taxon3.asn MODULE_IMPORT='objects/seqfeat/seqfeat' IMPDEPS='/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqfeat/seqfeat.asn' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/taxon3'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m taxon3.asn -M "objects/seqfeat/seqfeat.asn" -oA -oc taxon3 -or objects/taxon3 -odi -od taxon3.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd taxon3.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/taxon3'
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=valid MODULE_PATH=objects/valid MODULE_ASN=valid.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/valid'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m valid.asn -M "" -oA -oc valid -or objects/valid -odi -od valid.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd valid.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/valid'
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqcode/Seq_code_set_.cpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqcode/seqcode___.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/blastxml/BlastOutput_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/blastxml/BlastOutput.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blastxml/BlastOutput.cpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blastxml/blastxml__.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=gencoll_client MODULE_PATH=objects/genomecoll MODULE_ASN=gencoll_client.asn MODULE_IMPORT='objects/genomecoll/genome_collection' IMPDEPS='/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/genomecoll/genome_collection.asn' IMPFILES='objects/genomecoll/genome_collection.asn' top_srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/genomecoll'
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src -m gencoll_client.asn -M "objects/genomecoll/genome_collection.asn" -oA -oc gencoll_client -or objects/genomecoll -odi -od gencoll_client.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd gencoll_client.dump
datatool: 2.17.0
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/genomecoll'
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blastxml/BlastOutput_.cpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blastxml/blastxml___.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:69:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general/Date_.cpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general/general___.cpp:2:
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector<double>::iterator {aka __gnu_cxx::__normal_iterator<double*, std::vector<double> >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/7/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqcode/seqcode__.cpp -o seqcode__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqcode/seqcode___.cpp -o seqcode___.o
/bin/rm -f libseqcode.so .libseqcode.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libseqcode.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC seqcode__.o seqcode___.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqcode.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libseqcode.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libseqcode.so
/bin/ln -f .seqcode.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.seqcode.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode'
cd objects/blastxml2/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=blastxml2 UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2'
In file included from /usr/include/c++/7/vector:64:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general/Date_.cpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general/general___.cpp:2:
/usr/include/c++/7/bits/stl_vector.h: In static member function 'static void* ncbi::CStlClassInfoFunctions<Container>::AddElement(const ncbi::CContainerTypeInfo*, ncbi::TObjectPtr, ncbi::TConstObjectPtr, ncbi::ESerialRecursionMode) [with Container = std::vector<double>]':
/usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blastxml2 TMPL=blastxml2 -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/blastxml2/BlastOutput2_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/blastxml2/BlastOutput2.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blastxml2/BlastOutput2.cpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blastxml2/blastxml2__.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/objectinfo.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/general/uoconv.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general/uoconv.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blastxml/blastxml__.cpp -o blastxml__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blastxml/blastxml___.cpp -o blastxml___.o
/bin/rm -f libblastxml.so .libblastxml.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libblastxml.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blastxml__.o blastxml___.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastxml.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libblastxml.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libblastxml.so
/bin/ln -f .blastxml.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.blastxml.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml'
cd objects/entrez2/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=entrez2 UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/entrez2 TMPL=entrez2 -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blastxml2/BlastOutput2_.cpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blastxml2/blastxml2___.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/entrez2/E2Reply_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/entrez2/E2Reply.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/entrez2/E2Reply.cpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/entrez2/entrez2__.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:69:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/objectinfo.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/general/uoconv.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general/uoconv.cpp:36:
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector<double>::iterator {aka __gnu_cxx::__normal_iterator<double*, std::vector<double> >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
cd objects/gbseq/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=gbseq UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/gbseq TMPL=gbseq -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/entrez2/E2Reply_.cpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/entrez2/entrez2___.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/vector.tcc: In function 'ncbi::CRef<ncbi::objects::CUser_field> ncbi::objects::s_PackAsUserField(ncbi::CConstObjectInfo, const string*)':
/usr/include/c++/7/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/gbseq/GBAltSeqData_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/gbseq/GBAltSeqData.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/gbseq/GBAltSeqData.cpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/gbseq/gbseq__.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blastxml2/blastxml2__.cpp -o blastxml2__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blastxml2/blastxml2___.cpp -o blastxml2___.o
/bin/rm -f libblastxml2.so .libblastxml2.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libblastxml2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blastxml2__.o blastxml2___.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastxml2.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libblastxml2.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libblastxml2.so
/bin/ln -f .blastxml2.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.blastxml2.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2'
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general/general__.cpp -o general__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general/general___.cpp -o general___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/general/uoconv.cpp -o uoconv.o
/bin/rm -f libgeneral.so .libgeneral.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libgeneral.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC general__.o general___.o uoconv.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lxser -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgeneral.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libgeneral.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libgeneral.so
/bin/ln -f .general.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.general.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general'
cd objects/biblio/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=biblio UNIX_PROJ="" sources= configurables=configurables.null
cd objects/valid/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=valid UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio'
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/valid TMPL=valid -w -j --jobserver-fds=3,4 all
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/biblio TMPL=biblio -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/gbseq/GBAltSeqData_.cpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/gbseq/gbseq___.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/biblio/Affil_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/biblio/Affil.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/biblio/Affil.cpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio__.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/static_set.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/valid/Comment_rule.cpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/valid/valid__.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/entrez2/entrez2__.cpp -o entrez2__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/entrez2/entrez2___.cpp -o entrez2___.o
/bin/rm -f libentrez2.so .libentrez2.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libentrez2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC entrez2__.o entrez2___.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libentrez2.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libentrez2.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libentrez2.so
/bin/ln -f .entrez2.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.entrez2.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/biblio/Affil_.cpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio___.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/gbseq/gbseq__.cpp -o gbseq__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/gbseq/gbseq___.cpp -o gbseq___.o
/bin/rm -f libgbseq.so .libgbseq.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libgbseq.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC gbseq__.o gbseq___.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgbseq.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libgbseq.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libgbseq.so
/bin/ln -f .gbseq.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.gbseq.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq'
cd objects/entrez2/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=entrez2cli UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/entrez2 TMPL=entrez2cli -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/valid/Comment_rule_.cpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/valid/valid___.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/entrez2/entrez2_client_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/entrez2/entrez2_client.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/entrez2/entrez2_client.cpp:42:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/entrez2/entrez2_client_.cpp:39:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/valid/valid__.cpp -o valid__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/valid/valid___.cpp -o valid___.o
/bin/rm -f libvalid.so .libvalid.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libvalid.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC valid__.o valid___.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lgeneral -lxser -lxregexp -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libvalid.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libvalid.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libvalid.so
/bin/ln -f .valid.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.valid.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid'
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/entrez2/entrez2_client.cpp -o entrez2_client.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/entrez2/entrez2_client_.cpp -o entrez2_client_.o
/bin/rm -f libentrez2cli.so .libentrez2cli.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libentrez2cli.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC entrez2_client.o entrez2_client_.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lentrez2 -lxconnect -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libentrez2cli.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libentrez2cli.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libentrez2cli.so
/bin/ln -f .entrez2cli.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.entrez2cli.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/biblio/citation_base.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/biblio/citation_base.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio__.cpp -o biblio__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio___.cpp -o biblio___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/biblio/citation_base.cpp -o citation_base.o
/bin/rm -f libbiblio.so .libbiblio.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libbiblio.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC biblio__.o biblio___.o citation_base.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lgeneral -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libbiblio.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libbiblio.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libbiblio.so
/bin/ln -f .biblio.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.biblio.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio'
cd objects/medline/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=medline UNIX_PROJ="" sources= configurables=configurables.null
cd objects/medlars/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=medlars UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline'
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/medlars TMPL=medlars -w -j --jobserver-fds=3,4 all
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/medline TMPL=medline -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/medlars/Medlars_entry_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/medlars/Medlars_entry.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/medlars/Medlars_entry.cpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/medlars/medlars__.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/medline/DocRef_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/medline/DocRef.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/medline/DocRef.cpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/medline/medline__.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/medlars/Medlars_entry_.cpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/medlars/medlars___.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/medline/DocRef_.cpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/medline/medline___.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/medlars/medlars__.cpp -o medlars__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/medlars/medlars___.cpp -o medlars___.o
/bin/rm -f libmedlars.so .libmedlars.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libmedlars.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC medlars__.o medlars___.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lbiblio -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmedlars.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libmedlars.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libmedlars.so
/bin/ln -f .medlars.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.medlars.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars'
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/medline/medline__.cpp -o medline__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/medline/medline___.cpp -o medline___.o
/bin/rm -f libmedline.so .libmedline.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libmedline.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC medline__.o medline___.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lbiblio -lgeneral -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmedline.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libmedline.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libmedline.so
/bin/ln -f .medline.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.medline.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline'
cd objects/pub/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=pub UNIX_PROJ="" sources= configurables=configurables.null
cd objects/pubmed/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=pubmed UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub'
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/pub TMPL=pub -w -j --jobserver-fds=3,4 all
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/pubmed TMPL=pubmed -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/pubmed/Pubmed_entry_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/pubmed/Pubmed_entry.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/pubmed/Pubmed_entry.cpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/pubmed/pubmed__.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/pub/Pub_.cpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/pub/pub___.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/pubmed/Pubmed_entry_.cpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/pubmed/pubmed___.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/pub/Pub_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/pub/Pub.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/pub/Pub.cpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/pub/pub__.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/pubmed/pubmed__.cpp -o pubmed__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/pubmed/pubmed___.cpp -o pubmed___.o
/bin/rm -f libpubmed.so .libpubmed.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libpubmed.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC pubmed__.o pubmed___.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lmedline -lbiblio -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libpubmed.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libpubmed.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libpubmed.so
/bin/ln -f .pubmed.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.pubmed.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed'
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/pub/pub__.cpp -o pub__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/pub/pub___.cpp -o pub___.o
/bin/rm -f libpub.so .libpub.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libpub.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC pub__.o pub___.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lmedline -lbiblio -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libpub.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libpub.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libpub.so
/bin/ln -f .pub.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.pub.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub'
cd objects/seq/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=seq UNIX_PROJ="" sources= configurables=configurables.null
cd objects/mla/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=mla UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/mla TMPL=mla -w -j --jobserver-fds=3,4 all
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq TMPL=seq -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/mla/Error_val_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/mla/Error_val.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/mla/Error_val.cpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/mla/mla__.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/mla/Error_val_.cpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/mla/mla___.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Align_def_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Align_def.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/Align_def.cpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/seq__.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_diag_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_diag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/Dense_diag.cpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/seqalign__.cpp:2,
from seqalign__.cpp:1:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Align_def_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Align_def.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/Align_def.cpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/seq__.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/seqalign__.cpp:9:0,
from seqalign__.cpp:1:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/Seq_align.cpp: In member function 'void ncbi::objects::CSeq_align::RemapToLoc(ncbi::objects::CSeq_align_Base::TDim, const ncbi::objects::CSeq_loc&, bool)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/Seq_align.cpp:1381:69: warning: 'void ncbi::objects::CDense_seg::RemapToLoc(ncbi::objects::CDense_seg_Base::TDim, const ncbi::objects::CSeq_loc&, bool)' is deprecated [-Wdeprecated-declarations]
SetSegs().SetDenseg().RemapToLoc(row, dst_loc, ignore_strand);
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/seqalign__.cpp:3:0,
from seqalign__.cpp:1:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/Dense_seg.cpp:909:6: note: declared here
void CDense_seg::RemapToLoc(TDim row, const CSeq_loc& loc,
^~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/seqalign__.cpp:9:0,
from seqalign__.cpp:1:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/Seq_align.cpp:1385:62: warning: 'void ncbi::objects::CStd_seg::RemapToLoc(ncbi::objects::CStd_seg_Base::TDim, const ncbi::objects::CSeq_loc&, bool)' is deprecated [-Wdeprecated-declarations]
(*std_it)->RemapToLoc(row, dst_loc, ignore_strand);
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/Seq_align.cpp:42:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/seqalign__.cpp:9,
from seqalign__.cpp:1:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Std_seg.hpp:79:26: note: declared here
NCBI_DEPRECATED void RemapToLoc(TDim row,
^~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/seqalign__.cpp:9:0,
from seqalign__.cpp:1:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/Seq_align.cpp:1390:68: warning: 'void ncbi::objects::CSeq_align::RemapToLoc(ncbi::objects::CSeq_align_Base::TDim, const ncbi::objects::CSeq_loc&, bool)' is deprecated [-Wdeprecated-declarations]
(*seq_align_it)->RemapToLoc(row, dst_loc, ignore_strand);
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/Seq_align.cpp:1364:6: note: declared here
void CSeq_align::RemapToLoc(TDim row,
^~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqblock/EMBL_block_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqblock/EMBL_block.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqblock/EMBL_block.cpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqblock/seqblock__.cpp:2,
from seqblock__.cpp:1:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/mla/mla__.cpp -o mla__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/mla/mla___.cpp -o mla___.o
/bin/rm -f libmla.so .libmla.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libmla.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC mla__.o mla___.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lmedlars -lpub -lpubmed -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmla.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libmla.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libmla.so
/bin/ln -f .mla.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.mla.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
cd objects/mla/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=mlacli UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/mla TMPL=mlacli -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/BinomialOrgName_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/BinomialOrgName.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/BinomialOrgName.cpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:2,
from seqfeat__.cpp:1:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/mla/mla_client_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/mla/mla_client.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/mla/mla_client.cpp:41:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/BinomialOrgName_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/BinomialOrgName.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/BinomialOrgName.cpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:2,
from seqfeat__.cpp:1:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:30:0,
from seqfeat__.cpp:1:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/PCRPrimerSeq.cpp: In static member function 'static bool ncbi::objects::CPCRPrimerSeq::Fixi(std::__cxx11::string&)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/PCRPrimerSeq.cpp:249:72: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::Find(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, ncbi::NStr::EOccurrence, ncbi::NStr::ECase)' is deprecated [-Wdeprecated-declarations]
pos = NStr::Find(seq, "i", pos, NPOS, NStr::eFirst, NStr::eCase);
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/BinomialOrgName_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/BinomialOrgName.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/BinomialOrgName.cpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:2,
from seqfeat__.cpp:1:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:5473:11: note: declared here
SIZE_TYPE NStr::Find(const CTempString str, const CTempString pattern,
^~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:42:0,
from seqfeat__.cpp:1:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/RNA_ref.cpp: In function 'ncbi::CTempString ncbi::objects::s_AaName(int)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/RNA_ref.cpp:124:24: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (idx > 0 && idx < ArraySize(sc_TrnaList)) {
~~~~^~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/BinomialOrgName_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/BinomialOrgName.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/BinomialOrgName.cpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:2,
from seqfeat__.cpp:1:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/SubSource.cpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/SubSource.cpp:246:69: note: in expansion of macro 'THROWS'
CRef<CDate> CSubSource::DateFromCollectionDate (const string& test) THROWS((CException))
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/mla/mla_client_.cpp:39:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Giimport_id_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Giimport_id.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqloc/Giimport_id.cpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqloc/seqloc__.cpp:2,
from seqloc__.cpp:1:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/mla/mla_client.cpp -o mla_client.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/mla/mla_client_.cpp -o mla_client_.o
/bin/rm -f libmlacli.so .libmlacli.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libmlacli.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC mla_client.o mla_client_.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lmla -lxconnect -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmlacli.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libmlacli.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libmlacli.so
/bin/ln -f .mlacli.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.mlacli.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/seq__.cpp -o seq__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include seqalign__.cpp -o seqalign__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include seqblock__.cpp -o seqblock__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include seqfeat__.cpp -o seqfeat__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include seqloc__.cpp -o seqloc__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqres/Byte_graph_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqres/Byte_graph.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqres/Byte_graph.cpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqres/seqres__.cpp:2,
from seqres__.cpp:1:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqtable/BVector_data_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqtable/BVector_data.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqtable/BVector_data.cpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqtable/seqtable__.cpp:2,
from seqtable__.cpp:1:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/Align_def_.cpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/seq___.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/Align_def_.cpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/seq___.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /usr/include/c++/7/vector:69:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqtable/BVector_data_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqtable/BVector_data.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqtable/BVector_data.cpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqtable/seqtable__.cpp:2,
from seqtable__.cpp:1:
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long int&}; _Tp = long long int; _Alloc = std::allocator<long long int>]':
/usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector<long long int>::iterator {aka __gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector<double>::iterator {aka __gnu_cxx::__normal_iterator<double*, std::vector<double> >}' changed in GCC 7.1
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/7/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:64:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqtable/BVector_data_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqtable/BVector_data.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqtable/BVector_data.cpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqtable/seqtable__.cpp:2,
from seqtable__.cpp:1:
/usr/include/c++/7/bits/stl_vector.h: In member function 'void ncbi::objects::CSeqTable_multi_data::ChangeToInt8()':
/usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/7/bits/stl_vector.h: In member function 'void ncbi::objects::CSeqTable_multi_data::ChangeToInt_scaled(int, int)':
/usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/Dense_diag_.cpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/seqalign___.cpp:2,
from seqalign___.cpp:1:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqblock/EMBL_block_.cpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqblock/seqblock___.cpp:2,
from seqblock___.cpp:1:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/BinomialOrgName_.cpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/seqfeat___.cpp:2,
from seqfeat___.cpp:1:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/BinomialOrgName_.cpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/seqfeat___.cpp:2,
from seqfeat___.cpp:1:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
ast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include seqres__.cpp -o seqres__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include seqtable__.cpp -o seqtable__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/seq___.cpp -o seq___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include seqalign___.cpp -o seqalign___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include seqblock___.cpp -o seqblock___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include seqfeat___.cpp -o seqfeat___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbiIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqloc/Giimport_id_.cpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqloc/seqloc___.cpp:2,
from seqloc___.cpp:1:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqres/Byte_graph_.cpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqres/seqres___.cpp:2,
from seqres___.cpp:1:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:69:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqres/Byte_graph_.cpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqres/seqres___.cpp:2,
from seqres___.cpp:1:
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector<double>::iterator {aka __gnu_cxx::__normal_iterator<double*, std::vector<double> >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/7/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:64:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqres/Byte_graph_.cpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqres/seqres___.cpp:2,
from seqres___.cpp:1:
/usr/include/c++/7/bits/stl_vector.h: In static member function 'static void* ncbi::CStlClassInfoFunctions<Container>::AddElement(const ncbi::CContainerTypeInfo*, ncbi::TObjectPtr, ncbi::TConstObjectPtr, ncbi::ESerialRecursionMode) [with Container = std::vector<double>]':
/usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqtable/BVector_data_.cpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqtable/seqtable___.cpp:2,
from seqtable___.cpp:1:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Seq_data_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Seq_data.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/seqport_util.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/seqport_util.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:69:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqtable/BVector_data_.cpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqtable/seqtable___.cpp:2,
from seqtable___.cpp:1:
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector<double>::iterator {aka __gnu_cxx::__normal_iterator<double*, std::vector<double> >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/7/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:64:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqtable/BVector_data_.cpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqtable/seqtable___.cpp:2,
from seqtable___.cpp:1:
/usr/include/c++/7/bits/stl_vector.h: In static member function 'static void* ncbi::CStlClassInfoFunctions<Container>::AddElement(const ncbi::CContainerTypeInfo*, ncbi::TObjectPtr, ncbi::TConstObjectPtr, ncbi::ESerialRecursionMode) [with Container = std::vector<double>]':
/usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:69:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqtable/BVector_data_.cpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqtable/seqtable___.cpp:2,
from seqtable___.cpp:1:
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long int&}; _Tp = long long int; _Alloc = std::allocator<long long int>]':
/usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector<long long int>::iterator {aka __gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long int}; _Tp = long long int; _Alloc = std::allocator<long long int>]':
/usr/include/c++/7/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:64:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqtable/BVector_data_.cpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqtable/seqtable___.cpp:2,
from seqtable___.cpp:1:
/usr/include/c++/7/bits/stl_vector.h: In static member function 'static void* ncbi::CStlClassInfoFunctions<Container>::AddElement(const ncbi::CContainerTypeInfo*, ncbi::TObjectPtr, ncbi::TConstObjectPtr, ncbi::ESerialRecursionMode) [with Container = std::vector<long long int>]':
/usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_id_tree.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_id_handle.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include seqloc___.cpp -o seqloc___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include seqres___.cpp -o seqres___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include seqtable___.cpp -o seqtable___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/seqport_util.cpp -o seqport_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_id_tree.cpp -o seq_id_tree.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_id_handle.cpp -o seq_id_handle.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/srIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/seq_id_mapper.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_id_mapper.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/seq_loc_mapper_base.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_loc_mapper_base.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/seq_align_mapper_base.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_align_mapper_base.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/seqlocinfo.hpp:33,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/seqlocinfo.cpp:32:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_align_mapper_base.cpp: In member function 'void ncbi::objects::CSeq_align_Mapper_Base::x_GetDstStd(ncbi::CRef<ncbi::objects::CSeq_align>&) const':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_align_mapper_base.cpp:1505:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if ( row_n == p_row ) {
~~~~~~^~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SeqFeatData_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SeqFeatData.hpp:93,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/sofa_type.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/sofa_map.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
c/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_id_mapper.cpp -o seq_id_mapper.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_loc_mapper_base.cpp -o seq_loc_mapper_base.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_align_mapper_base.cpp -o seq_align_mapper_base.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/seqlocinfo.cpp -o seqlocinfo.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/sofa_map.cpp -o sofa_map.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/so_map.cpp In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SeqFeatData_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SeqFeatData.hpp:93,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/so_map.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:69:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/seq_loc_mapper_base.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_loc_mapper_base.cpp:34:
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double> >; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/7/bits/vector.tcc:630:7: note: parameter passing for argument of type 'std::vector<double>::iterator {aka __gnu_cxx::__normal_iterator<double*, std::vector<double> >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/vector.tcc:630:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/7/bits/vector.tcc:630:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' changed in GCC 7.1
In file included from /usr/include/c++/7/vector:64:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/seq_loc_mapper_base.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_loc_mapper_base.cpp:34:
/usr/include/c++/7/bits/stl_vector.h: In member function 'ncbi::CRef<ncbi::objects::CSeq_graph> ncbi::objects::CSeq_loc_Mapper_Base::Map(const ncbi::objects::CSeq_graph&)':
/usr/include/c++/7/bits/stl_vector.h:1406:19: note: parameter passing for argument of type 'std::vector<double>::iterator {aka __gnu_cxx::__normal_iterator<double*, std::vector<double> >}' changed in GCC 7.1
_M_range_insert(__pos, __first, __last,
~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
std::__iterator_category(__first));
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_vector.h:1406:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' changed in GCC 7.1
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_loc_from_string.cpp:35:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_loc_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_loc.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/seq_loc_reverse_complementer.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_loc_reverse_complementer.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-o so_map.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_loc_from_string.cpp -o seq_loc_from_string.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_loc_reverse_complementer.cpp -o seq_loc_reverse_complementer.o
/bin/rm -f libseq.so .libseq.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libseq.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC seq__.o seqalign__.o seqblock__.o seqfeat__.o seqloc__.o seqres__.o seqtable__.o seq___.o seqalign___.o seqblock___.o seqfeat___.o seqloc___.o seqres___.o seqtable___.o seqport_util.o seq_id_tree.o seq_id_handle.o seq_id_mapper.o seq_loc_mapper_base.o seq_align_mapper_base.o seqlocinfo.o sofa_map.o so_map.o seq_loc_from_string.o seq_loc_reverse_complementer.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqcode -lpub -lbiblio -lgeneral -lxser -lsequtil -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseq.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libseq.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libseq.so
/bin/ln -f .seq.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.seq.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
cd objects/seqset/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=seqset UNIX_PROJ="" sources= configurables=configurables.null
cd objects/blastdb/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=blastdb UNIX_PROJ="" sources= configurables=configurables.null
cd objects/genomecoll/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=genome_collection UNIX_PROJ="" sources= configurables=configurables.null
cd objects/variation/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=variation UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset'
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb'
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll'
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqset TMPL=seqset -w -j --jobserver-fds=3,4 all
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blastdb TMPL=blastdb -w -j --jobserver-fds=3,4 all
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/variation TMPL=variation -w -j --jobserver-fds=3,4 all
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/genomecoll TMPL=genome_collection -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/blastdb/Blast_db_mask_info_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/blastdb/Blast_db_mask_info.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blastdb/Blast_db_mask_info.cpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blastdb/blastdb__.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/variation/VariantPlacement_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/variation/VariantPlacement.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/variation/VariantPlacement.cpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/variation/variation__.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialdef.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/impl/typeref.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serial.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqset/Bioseq_set.cpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset__.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/genomecoll/GC_Assemblies_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/genomecoll/GC_Assemblies.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/genomecoll/GC_Assemblies.cpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/genomecoll/genome_collection__.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/genomecoll/GC_Assemblies_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/genomecoll/GC_Assemblies.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/genomecoll/GC_Assemblies.cpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/genomecoll/genome_collection__.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/variation/VariantPlacement_.cpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/variation/variation___.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/variation/VariantPlacement_.cpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/variation/variation___.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blastdb/Blast_db_mask_info_.cpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blastdb/blastdb___.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blastdb/blastdb__.cpp -o blastdb__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blastdb/blastdb___.cpp -o blastdb___.o
/bin/rm -f libblastdb.so .libblastdb.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libblastdb.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blastdb__.o blastdb___.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lseq -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastdb.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libblastdb.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libblastdb.so
/bin/ln -f .blastdb.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.blastdb.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb'
cd objects/taxon1/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=taxon1 UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/taxon1 TMPL=taxon1 -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/genomecoll/GC_Assemblies_.cpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/genomecoll/genome_collection___.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqset/Bioseq_set_.cpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset___.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/taxon1/Taxon1_data_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/taxon1/Taxon1_data.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/taxon1/Taxon1_data.cpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/taxon1/taxon1__.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/variation/variation__.cpp -o variation__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/variation/variation___.cpp -o variation___.o
/bin/rm -f libvariation.so .libvariation.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libvariation.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC variation__.o variation___.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lseq -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libvariation.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libvariation.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libvariation.so
/bin/ln -f .variation.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.variation.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation'
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/taxon1/Taxon1_data_.cpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/taxon1/taxon1___.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cd objects/taxon3/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=taxon3 UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/taxon3 TMPL=taxon3 -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqset/gb_release_file.hpp:34,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqset/gb_release_file.cpp:32:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/taxon3/SequenceOfInt_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/taxon3/SequenceOfInt.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/taxon3/SequenceOfInt.cpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/taxon3/taxon3__.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/taxon3/SequenceOfInt_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/taxon3/SequenceOfInt.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/taxon3/SequenceOfInt.cpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/taxon3/taxon3__.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset__.cpp -o seqset__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset___.cpp -o seqset___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqset/gb_release_file.cpp -o gb_release_file.o
/bin/rm -f libseqset.so .libseqset.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libseqset.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC seqset__.o seqset___.o gb_release_file.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lseq -lseqcode -lsequtil -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqset.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libseqset.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libseqset.so
/bin/ln -f .seqset.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.seqset.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset'
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/taxon3/SequenceOfInt_.cpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/taxon3/taxon3___.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/taxon3/SequenceOfInt_.cpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/taxon3/taxon3___.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/taxon1/taxon1.cpp:34:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/genomecoll/genome_collection__.cpp -o genome_collection__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/genomecoll/genome_collection___.cpp -o genome_collection___.o
/bin/rm -f libgenome_collection.so .libgenome_collection.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libgenome_collection.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC genome_collection__.o genome_collection___.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lseq -lgeneral -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgenome_collection.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libgenome_collection.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libgenome_collection.so
/bin/ln -f .genome_collection.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.genome_collection.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll'
cd objects/scoremat/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=scoremat UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/scoremat TMPL=scoremat -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialdef.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/impl/typeref.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serial.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/taxon1/cache.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/taxon1/taxon1.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/BlockProperty_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/BlockProperty.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/scoremat/BlockProperty.cpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/scoremat/scoremat__.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialdef.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/impl/typeref.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serial.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/taxon1/cache.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/scoremat/BlockProperty_.cpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/scoremat/scoremat___.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cd objects/seqedit/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=seqedit UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqedit TMPL=seqedit -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/taxon3/taxon3.cpp:34:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/taxon3/taxon3.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqedit/SeqEdit_Cmd_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqedit/SeqEdit_Cmd.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqedit/SeqEdit_Cmd.cpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqedit/seqedit__.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/scoremat/scoremat__.cpp -o scoremat__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/scoremat/scoremat___.cpp -o scoremat___.o
/bin/rm -f libscoremat.so .libscoremat.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libscoremat.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC scoremat__.o scoremat___.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqset -lseq -lgeneral -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libscoremat.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libscoremat.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libscoremat.so
/bin/ln -f .scoremat.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.scoremat.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat'
cd objects/seqsplit/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=seqsplit UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqsplit TMPL=seqsplit -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqedit/SeqEdit_Cmd_.cpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqedit/seqedit___.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/taxon1/Taxon1_data_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/taxon1/Taxon1_data.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/taxon1/taxon1__.hpp:1,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/taxon1/taxon1.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/taxon1/utils.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/taxon3/taxon3__.cpp -o taxon3__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/taxon3/taxon3___.cpp -o taxon3___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/taxon3/taxon3.cpp -o taxon3.o
/bin/rm -f libtaxon3.so .libtaxon3.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libtaxon3.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC taxon3__.o taxon3___.o taxon3.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lxconnect -lseq -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtaxon3.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libtaxon3.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libtaxon3.so
/bin/ln -f .taxon3.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.taxon3.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3'
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqsplit/ID2S_Bioseq_Ids_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqsplit/ID2S_Bioseq_Ids.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqsplit/ID2S_Bioseq_Ids.cpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqsplit/seqsplit__.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/taxon1/Taxon1_data_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/taxon1/Taxon1_data.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/taxon1/taxon1__.hpp:1,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/taxon1/taxon1.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/taxon1/utils.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqsplit/ID2S_Bioseq_Ids_.cpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqsplit/seqsplit___.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/taxon1/Taxon1_data_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/taxon1/Taxon1_data.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/taxon1/taxon1__.hpp:1,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/taxon1/taxon1.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/taxon1/ctreecont.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/taxon1/ctreecont.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/taxon1/Taxon1_data_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/taxon1/Taxon1_data.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/taxon1/taxon1__.hpp:1,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/taxon1/taxon1.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/taxon1/ctreecont.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/taxon1/ctreecont.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
cd objects/submit/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=submit UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/submit TMPL=submit -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/submit/Contact_info_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/submit/Contact_info.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/submit/Contact_info.cpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/submit/submit__.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/taxon1/taxon1__.cpp -o taxon1__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/taxon1/taxon1___.cpp -o taxon1___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/taxon1/taxon1.cpp -o taxon1.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/taxon1/cache.cpp -o cache.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/taxon1/utils.cpp -o utils.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/taxon1/ctreecont.cpp -o ctreecont.o
/bin/rm -f libtaxon1.so .libtaxon1.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libtaxon1.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC taxon1__.o taxon1___.o taxon1.o cache.o utils.o ctreecont.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lxconnect -lseq -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtaxon1.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libtaxon1.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libtaxon1.so
/bin/ln -f .taxon1.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.taxon1.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1'
cd objects/id1/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=id1 UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/id1 TMPL=id1 -w -j --jobserver-fds=3,4 all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqedit/seqedit__.cpp -o seqedit__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqedit/seqedit___.cpp -o seqedit___.o
/bin/rm -f libseqedit.so .libseqedit.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libseqedit.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC seqedit__.o seqedit___.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqset -lseq -lgeneral -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqedit.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libseqedit.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libseqedit.so
/bin/ln -f .seqedit.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.seqedit.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit'
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/submit/Contact_info_.cpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/submit/submit___.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/id1/Entry_complexities_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/id1/Entry_complexities.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/id1/Entry_complexities.cpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/id1/id1__.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/id1/Entry_complexities_.cpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/id1/id1___.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cd objects/blast/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=blast UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blast TMPL=blast -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/blast/Blas_get_searc_resul_reply_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/blast/Blas_get_searc_resul_reply.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blast/Blas_get_searc_resul_reply.cpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blast/blast__.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqsplit/seqsplit__.cpp -o seqsplit__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/seqsplit/seqsplit___.cpp -o seqsplit___.o
/bin/rm -f libseqsplit.so .libseqsplit.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libseqsplit.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC seqsplit__.o seqsplit___.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqset -lseq -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqsplit.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libseqsplit.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libseqsplit.so
/bin/ln -f .seqsplit.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.seqsplit.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit'
cd objects/id2/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=id2 UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/id2 TMPL=id2 -w -j --jobserver-fds=3,4 all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/submit/submit__.cpp -o submit__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/submit/submit___.cpp -o submit___.o
/bin/rm -f libsubmit.so .libsubmit.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libsubmit.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC submit__.o submit___.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqset -lseq -lbiblio -lgeneral -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsubmit.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libsubmit.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libsubmit.so
/bin/ln -f .submit.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.submit.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit'
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/id1/id1__.cpp -o id1__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/id1/id1___.cpp -o id1___.o
/bin/rm -f libid1.so .libid1.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libid1.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC id1__.o id1___.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqset -lseq -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid1.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libid1.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libid1.so
/bin/ln -f .id1.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.id1.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1'
cd objmgr/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=objmgr UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr TMPL=objmgr -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/id2/ID2S_Reply_Get_Chunk_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/id2/ID2S_Reply_Get_Chunk.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/id2/ID2S_Reply_Get_Chunk.cpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/id2/id2__.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/id2/ID2S_Reply_Get_Chunk_.cpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/id2/id2___.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/objmgr_exception.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seq_table_setters.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blast/Blas_get_searc_resul_reply_.cpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blast/blast___.cpp:2:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cd objtools/readers/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=xobjread UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers TMPL=xobjread -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/objmgr_exception.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seq_table_setters.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/read_util.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/format_guess_ex.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/seq_table_info.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seq_table_info.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/id2/id2__.cpp -o id2__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/id2/id2___.cpp -o id2___.o
/bin/rm -f libid2.so .libid2.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libid2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC id2__.o id2___.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqsplit -lseq -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid2.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libid2.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libid2.so
/bin/ln -f .id2.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.id2.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2'
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/agp_util.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/acc_pattern.cpp:43:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/seq_table_info.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seq_table_info.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/format_guess_ex.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /usr/include/c++/7/vector:69:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/agp_util.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/acc_pattern.cpp:43:
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector<double>::iterator {aka __gnu_cxx::__normal_iterator<double*, std::vector<double> >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/vector.tcc: In member function 'std::map<std::__cxx11::basic_string<char>, ncbi::CPatternStats*>::iterator ncbi::CAccPatternCounter::AddName(const string&, ncbi::CAccPatternCounter::TDoubleVec*)':
/usr/include/c++/7/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/blast/NCBI_Blast4_module.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/blast/names.hpp:45,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blast/names.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/agp_read.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_read.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_read.cpp: In function 'ncbi::CRef<ncbi::objects::CBioseq_set> ncbi::AgpRead(ncbi::CNcbiIstream&, ncbi::EAgpRead_IdRule, bool, std::vector<std::vector<char> >*)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_read.cpp:58:74: warning: 'void ncbi::AgpRead(ncbi::CNcbiIstream&, std::vector<ncbi::CRef<ncbi::objects::CSeq_entry> >&, ncbi::EAgpRead_IdRule, bool, std::vector<std::vector<char> >*)' is deprecated [-Wdeprecated-declarations]
AgpRead(is, entries, component_id_rule, set_gap_data, component_types);
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_read.cpp:33:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/agp_read.hpp:61:6: note: declared here
void AgpRead(CNcbiIstream& is,
^~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_read.cpp: In function 'void ncbi::AgpRead(ncbi::CNcbiIstream&, std::vector<ncbi::CRef<ncbi::objects::CSeq_entry> >&, ncbi::EAgpRead_IdRule, bool, std::vector<std::vector<char> >*)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_read.cpp:74:74: warning: 'void ncbi::AgpRead(ncbi::CNcbiIstream&, std::vector<ncbi::CRef<ncbi::objects::CBioseq> >&, ncbi::EAgpRead_IdRule, bool, std::vector<std::vector<char> >*)' is deprecated [-Wdeprecated-declarations]
AgpRead(is, bioseqs, component_id_rule, set_gap_data, component_types);
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_read.cpp:33:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/agp_read.hpp:52:6: note: declared here
void AgpRead(CNcbiIstream& is,
^~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/agp_util.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/agp_seq_entry.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_seq_entry.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/seq_annot_info.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seq_annot_info.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/seq_table_info.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/table_field.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blast/blast__.cpp -o blast__.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blast/blast___.cpp -o blast___.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blast/names.cpp -o names.o
/bin/rm -f libxnetblast.so .libxnetblast.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxnetblast.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blast__.o blast___.o names.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lscoremat -lseqset -lseq -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxnetblast.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxnetblast.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libxnetblast.so
/bin/ln -f .xnetblast.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.xnetblast.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/seq_annot_info.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seq_annot_info.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/agp_util.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_util.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/seq_table_info.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/table_field.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/seq_map.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/seq_map_switch.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seq_map_switch.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/snp_annot_info.cpp:32:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/read_util.cpp -o read_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/format_guess_ex.cpp -o format_guess_ex.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/acc_pattern.cpp -o acc_pattern.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_read.cpp -o agp_read.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_seq_entry.cpp -o agp_seq_entry.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_util.cpp -o agp_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/agp_validate_reader.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_validate_reader.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/aln_reader.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/aln_reader.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/bed_reader.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/aln_reader.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/aln_reader.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/aln_reader.cpp: In member function 'bool ncbi::CAlnReader::x_IsGap(ncbi::CAlnReader::TNumrow, ncbi::TSeqPos, const string&)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/aln_reader.cpp:409:13: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (row > m_MiddleSections.size()) {
~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/bed_reader.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seq_table_setters.cpp -o seq_table_setters.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seq_table_info.cpp -o seq_table_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seq_annot_info.cpp -o seq_annot_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/table_field.cpp -o table_field.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seq_map_switch.cpp -o seq_map_switch.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/snp_annot_info.cpp -o snp_annot_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/annot_collector.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/annot_types_ci.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/annot_types_ci.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/seq_loc_cvt.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seq_loc_cvt.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/annot_name.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/annot_selector.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/annot_selector.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cd objects/blast/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=xnetblastcli UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blast TMPL=xnetblastcli -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/blast/blastclient_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/blast/blastclient.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blast/blastclient.cpp:41:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Seq_align_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Seq_align.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/cigar.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/cigar.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blast/blastclient_.cpp:39:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta_aln_builder.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta_aln_builder.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=blast_unit_test_util UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=blast_unit_test_util -w -j --jobserver-fds=3,4 all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blast/blastclient.cpp -o blastclient.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objects/blast/blastclient_.cpp -o blastclient_.o
/bin/rm -f libxnetblastcli.so .libxnetblastcli.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxnetblastcli.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blastclient.o blastclient_.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lxnetblast -lxconnect -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxnetblastcli.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxnetblastcli.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libxnetblastcli.so
/bin/ln -f .xnetblastcli.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.xnetblastcli.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=seqalign_util UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=seqalign_util -w -j --jobserver-fds=3,4 all
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp: In constructor 'ncbi::objects::CFastaReader::CFastaReader(ncbi::ILineReader&, ncbi::objects::CFastaReader::TFlags)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:224:29: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:224:29: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:224:29: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:224:29: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:224:29: warning: 'ncbi::objects::CFastaReader::m_ExpectedEnd' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:377:29: note: declared here
NCBI_DEPRECATED TSeqPos m_ExpectedEnd;
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:224:29: warning: 'ncbi::objects::CFastaReader::m_ExpectedEnd' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:377:29: note: declared here
NCBI_DEPRECATED TSeqPos m_ExpectedEnd;
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp: In constructor 'ncbi::objects::CFastaReader::CFastaReader(ncbi::CNcbiIstream&, ncbi::objects::CFastaReader::TFlags)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:234:29: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:234:29: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:234:29: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:234:29: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:234:29: warning: 'ncbi::objects::CFastaReader::m_ExpectedEnd' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:377:29: note: declared here
NCBI_DEPRECATED TSeqPos m_ExpectedEnd;
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:234:29: warning: 'ncbi::objects::CFastaReader::m_ExpectedEnd' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:377:29: note: declared here
NCBI_DEPRECATED TSeqPos m_ExpectedEnd;
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp: In constructor 'ncbi::objects::CFastaReader::CFastaReader(const string&, ncbi::objects::CFastaReader::TFlags)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:244:29: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:244:29: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:244:29: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:244:29: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:244:29: warning: 'ncbi::objects::CFastaReader::m_ExpectedEnd' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:377:29: note: declared here
NCBI_DEPRECATED TSeqPos m_ExpectedEnd;
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:244:29: warning: 'ncbi::objects::CFastaReader::m_ExpectedEnd' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:377:29: note: declared here
NCBI_DEPRECATED TSeqPos m_ExpectedEnd;
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp: In constructor 'ncbi::objects::CFastaReader::CFastaReader(ncbi::objects::CReaderBase::TReaderFlags, ncbi::objects::CFastaReader::TFlags)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:254:29: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:254:29: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:254:29: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:254:29: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:254:29: warning: 'ncbi::objects::CFastaReader::m_ExpectedEnd' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:377:29: note: declared here
NCBI_DEPRECATED TSeqPos m_ExpectedEnd;
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:254:29: warning: 'ncbi::objects::CFastaReader::m_ExpectedEnd' is deprecated [-Wdeprecated-declarations]
m_MaxIDLength(kMax_UI4)
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:377:29: note: declared here
NCBI_DEPRECATED TSeqPos m_ExpectedEnd;
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp: In destructor 'virtual ncbi::objects::CFastaReader::~CFastaReader()':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:260:33: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
CFastaReader::~CFastaReader(void)
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:260:33: warning: 'ncbi::objects::CFastaReader::m_IDGenerator' is deprecated [-Wdeprecated-declarations]
CFastaReader::~CFastaReader(void)
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here
NCBI_DEPRECATED CRef<CSeqIdGenerator> m_IDGenerator;
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp: In member function 'virtual void ncbi::objects::CFastaReader::ParseDefLine(const TStr&, ncbi::objects::ILineErrorListener*)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:621:9: warning: 'ncbi::objects::CFastaReader::m_ExpectedEnd' is deprecated [-Wdeprecated-declarations]
m_ExpectedEnd = range_end - range_start;
^~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:377:29: note: declared here
NCBI_DEPRECATED TSeqPos m_ExpectedEnd;
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:621:9: warning: 'ncbi::objects::CFastaReader::m_ExpectedEnd' is deprecated [-Wdeprecated-declarations]
m_ExpectedEnd = range_end - range_start;
^~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:377:29: note: declared here
NCBI_DEPRECATED TSeqPos m_ExpectedEnd;
^~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/test_objmgr.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/test_objmgr.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/range.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/neutral_seqalign.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqalign_cmp.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqalign_cmp.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Seq_descr.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/seq_descr_ci.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seq_descr_ci.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/test_objmgr.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/test_objmgr.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/range.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/neutral_seqalign.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqalign_set_convert.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqalign_set_convert.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:69:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/neutral_seqalign.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqalign_set_convert.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqalign_set_convert.cpp:36:
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ncbi::blast::qa::SeqAlign&}; _Tp = ncbi::blast::qa::SeqAlign; _Alloc = std::allocator<ncbi::blast::qa::SeqAlign>]':
/usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector<ncbi::blast::qa::SeqAlign>::iterator {aka __gnu_cxx::__normal_iterator<ncbi::blast::qa::SeqAlign*, std::vector<ncbi::blast::qa::SeqAlign> >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/feat_ci.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/feat_ci.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:64:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/neutral_seqalign.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqalign_set_convert.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqalign_set_convert.cpp:36:
/usr/include/c++/7/bits/stl_vector.h: In function 'void ncbi::blast::qa::BlastSeqAlignSetConvert(const ncbi::objects::CSeq_align&, std::vector<ncbi::blast::qa::SeqAlign>&)':
/usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::blast::qa::SeqAlign*, std::vector<ncbi::blast::qa::SeqAlign> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqalign_cmp.cpp -o seqalign_cmp.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqalign_set_convert.cpp -o seqalign_set_convert.o
/bin/rm -f libseqalign_util.a .libseqalign_util.a.stamp
ar cr libseqalign_util.a seqalign_cmp.o seqalign_set_convert.o
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqalign_util.a /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libseqalign_util.a /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libseqalign_util.a
/bin/ln -f .seqalign_util.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.seqalign_util.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
In file included from /usr/include/c++/7/vector:69:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ncbi::objects::SFastaFileMap::SFastaEntry&}; _Tp = ncbi::objects::SFastaFileMap::SFastaEntry; _Alloc = std::allocator<ncbi::objects::SFastaFileMap::SFastaEntry>]':
/usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector<ncbi::objects::SFastaFileMap::SFastaEntry>::iterator {aka __gnu_cxx::__normal_iterator<ncbi::objects::SFastaFileMap::SFastaEntry*, std::vector<ncbi::objects::SFastaFileMap::SFastaEntry> >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta_reader_utils.cpp:38:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta_reader_utils.cpp:38:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /usr/include/c++/7/vector:64:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37:
/usr/include/c++/7/bits/stl_vector.h: In member function 'virtual void ncbi::objects::CFastaMapper::AssembleSeq(ncbi::objects::ILineErrorListener*)':
/usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SFastaFileMap::SFastaEntry*, std::vector<ncbi::objects::SFastaFileMap::SFastaEntry> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^~~~~~
FFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_validate_reader.cpp -o agp_validate_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/aln_reader.cpp -o aln_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/bed_reader.cpp -o bed_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/cigar.cpp -o cigar.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp -o fasta.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta_aln_builder.cpp -o fasta_aln_builder.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta_reader_utils.cpp -o fasta_reader_utils.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/annot_collector.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/annot_types_ci.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/graph_ci.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/graph_ci.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/range.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/getfeature.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.cpp:227:5: note: in expansion of macro 'THROWS'
THROWS((CBlastException))
^
cd app/blast/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=blast_app_util UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast TMPL=blast_app_util -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast/blast_app_util.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast/blast_app_util.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:69:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/annot_types_ci.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/graph_ci.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/graph_ci.cpp:34:
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double> >; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/7/bits/vector.tcc:630:7: note: parameter passing for argument of type 'std::vector<double>::iterator {aka __gnu_cxx::__normal_iterator<double*, std::vector<double> >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/vector.tcc:630:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/7/bits/vector.tcc:630:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' changed in GCC 7.1
In file included from /usr/include/c++/7/vector:64:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/annot_types_ci.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/graph_ci.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/graph_ci.cpp:34:
/usr/include/c++/7/bits/stl_vector.h: In member function 'void ncbi::objects::CMappedGraph::MakeMappedGraphData(ncbi::objects::CSeq_graph&) const':
/usr/include/c++/7/bits/stl_vector.h:1406:19: note: parameter passing for argument of type 'std::vector<double>::iterator {aka __gnu_cxx::__normal_iterator<double*, std::vector<double> >}' changed in GCC 7.1
_M_range_insert(__pos, __first, __last,
~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
std::__iterator_category(__first));
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_vector.h:1406:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' changed in GCC 7.1
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/gff_reader.hpp:45,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff_reader.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/test_objmgr.cpp -o test_objmgr.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.cpp -o blast_test_util.o
/bin/rm -f libblast_unit_test_util.a .libblast_unit_test_util.a.stamp
ar cr libblast_unit_test_util.a test_objmgr.o blast_test_util.o
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_unit_test_util.a /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libblast_unit_test_util.a /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libblast_unit_test_util.a
/bin/ln -f .blast_unit_test_util.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.blast_unit_test_util.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd objtools/blast/services/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=blast_services UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/services TMPL=blast_services -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/services/blast_services.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/annot_object.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/annot_object.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/gff_reader.hpp:45,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff_reader.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast/blast_app_util.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast/blast_app_util.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^
-Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/annot_types_ci.cpp -o annot_types_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seq_loc_cvt.cpp -o seq_loc_cvt.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/annot_selector.cpp -o annot_selector.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seq_descr_ci.cpp -o seq_descr_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/feat_ci.cpp -o feat_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/graph_ci.cpp -o graph_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/annot_object.cpp -o annot_object.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compilmake[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/services/blast_services.cpp -o blast_services.o
/bin/rm -f libblast_services.so .libblast_services.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libblast_services.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blast_services.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lxnetblastcli -lxnetblast -lxser -lxconnect -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_services.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libblast_services.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libblast_services.so
/bin/ln -f .blast_services.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.blast_services.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services'
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/annot_object_index.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/annot_object_index.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/track_data.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/annot_collector.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/annot_types_ci.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/annot_ci.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/annot_ci.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/tse_info_object.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/seq_entry_info.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/tse_info.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/data_source.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/tse_info.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast/blast_app_util.cpp -o blast_app_util.o
/bin/rm -f libblast_app_util.a .libblast_app_util.a.stamp
ar cr libblast_app_util.a blast_app_util.o
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_app_util.a /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libblast_app_util.a /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libblast_app_util.a
/bin/ln -f .blast_app_util.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.blast_app_util.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/reader_data.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/tse_info_object.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/tse_info_object.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/microarray_reader.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/range.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/phrap.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/microarray_reader.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/tse_info_object.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/seq_entry_info.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seq_entry_info.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/bioseq_base_info.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_base_info.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/getfeature.cpp -o getfeature.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff_reader.cpp -o gff_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/track_data.cpp -o track_data.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/reader_data.cpp -o reader_data.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/microarray_reader.cpp -o microarray_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/phrap.cpp -o phrap.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/reader_base.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/readfeat.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/reader_base.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
e.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/annot_object_index.cpp -o annot_object_index.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/annot_ci.cpp -o annot_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/tse_info.cpp -o tse_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/tse_info_object.cpp -o tse_info_object.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seq_entry_info.cpp -o seq_entry_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_base_info.cpp -o bioseq_base_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_set_info.cpp -o bioseq_set_info.o /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/reader_base.cpp: In member function 'virtual bool ncbi::objects::CReaderBase::xIsTrackTerminator(const ncbi::CTempString&)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/reader_base.cpp:652:45: warning: 'static ncbi::CTempString ncbi::NStr::TruncateSpaces(ncbi::CTempString, ncbi::NStr::ETrunc)' is deprecated [-Wdeprecated-declarations]
auto line = NStr::TruncateSpaces(strLine);
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/reader_base.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:2214:24: note: declared here
static CTempString TruncateSpaces(const CTempString str,
^~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/readfeat.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/tse_info_object.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/seq_entry_info.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_set_info.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/readfeat.cpp: In member function 'void ncbi::objects::CFeature_table_reader_imp::x_InitId(const string&, ncbi::objects::CFeature_table_reader::TFlags)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/readfeat.cpp:3310:46: warning: enum constant in boolean context [-Wint-in-bool-context]
(flags && CFeature_table_reader::fAllIdsAsLocal) ? CSeq_id::fParse_AnyLocal:CSeq_id::fParse_Default);
^~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/bioseq_base_info.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/bioseq_info.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_info.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/bioseq_base_info.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/bioseq_info.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_info.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/tse_info_object.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/seq_entry_info.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/tse_info.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/data_source.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/data_source.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/rm_reader.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/rm_reader.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/rm_reader.cpp: In member function 'ncbi::CRef<ncbi::objects::CSeq_feat> ncbi::objects::CRepeatToFeat::operator()(const ncbi::objects::IRepeatRegion&)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/rm_reader.cpp:551:44: warning: enum constant in boolean context [-Wint-in-bool-context]
if (fRemoveRedundancy && m_Library &&
^~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/wiggle_reader.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/priority.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/priority.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:69:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/wiggle_reader.cpp:35:
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ncbi::objects::CRawWiggleRecord&}; _Tp = ncbi::objects::CRawWiggleRecord; _Alloc = std::allocator<ncbi::objects::CRawWiggleRecord>]':
/usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector<ncbi::objects::CRawWiggleRecord>::iterator {aka __gnu_cxx::__normal_iterator<ncbi::objects::CRawWiggleRecord*, std::vector<ncbi::objects::CRawWiggleRecord> >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:64:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/wiggle_reader.cpp:35:
/usr/include/c++/7/bits/stl_vector.h: In member function 'bool ncbi::objects::CWiggleReader::xReadVariableStepDataRaw(ncbi::ILineReader&, ncbi::objects::CRawWiggleTrack&, ncbi::objects::ILineErrorListener*)':
/usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::CRawWiggleRecord*, std::vector<ncbi::objects::CRawWiggleRecord> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/7/bits/stl_vector.h: In member function 'bool ncbi::objects::CWiggleReader::xReadFixedStepDataRaw(ncbi::ILineReader&, ncbi::objects::CRawWiggleTrack&, ncbi::objects::ILineErrorListener*)':
/usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::CRawWiggleRecord*, std::vector<ncbi::objects::CRawWiggleRecord> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:69:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/wiggle_reader.cpp:35:
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ncbi::objects::SValueInfo&}; _Tp = ncbi::objects::SValueInfo; _Alloc = std::allocator<ncbi::objects::SValueInfo>]':
/usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector<ncbi::objects::SValueInfo>::iterator {aka __gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector<double>::iterator {aka __gnu_cxx::__normal_iterator<double*, std::vector<double> >}' changed in GCC 7.1
/usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector<double>::iterator {aka __gnu_cxx::__normal_iterator<double*, std::vector<double> >}' changed in GCC 7.1
In file included from /usr/include/c++/7/algorithm:62:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/wiggle_reader.cpp:35:
/usr/include/c++/7/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >; _Compare = __gnu_cxx::__ops::_Val_less_iter]':
/usr/include/c++/7/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
__unguarded_linear_insert(_RandomAccessIterator __last,
^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/7/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
__insertion_sort(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
In file included from /usr/include/c++/7/bits/stl_algo.h:61:0,
from /usr/include/c++/7/algorithm:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/wiggle_reader.cpp:35:
/usr/include/c++/7/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >; _Distance = int; _Tp = ncbi::objects::SValueInfo; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/7/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
__adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
^~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_heap.h: In function 'void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/7/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
__make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last,
^~~~~~~~~~~
/usr/include/c++/7/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
In file included from /usr/include/c++/7/algorithm:62:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/wiggle_reader.cpp:35:
/usr/include/c++/7/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/7/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
__introsort_loop(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
std::__introsort_loop(__cut, __last, __depth_limit, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1672:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
std::__make_heap(__first, __middle, __comp);
~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In member function 'void ncbi::objects::CWiggleReader::xPreprocessValues(ncbi::objects::SWiggleStat&)':
/usr/include/c++/7/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
std::__introsort_loop(__first, __last,
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
std::__lg(__last - __first) * 2,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__comp);
~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
std::__insertion_sort(__first, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:64:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/wiggle_reader.cpp:35:
/usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/7/bits/stl_vector.h: In member function 'ncbi::CRef<ncbi::objects::CSeq_table> ncbi::objects::CWiggleReader::xMakeTable()':
/usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/7/bits/stl_vector.h: In member function 'void ncbi::objects::CWiggleReader::xReadFixedStepData(const ncbi::objects::SFixedStepInfo&, ncbi::ILineReader&, ncbi::objects::ILineErrorListener*)':
/usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/7/bits/stl_vector.h: In member function 'void ncbi::objects::CWiggleReader::xReadVariableStepData(const ncbi::objects::SVarStepInfo&, ncbi::ILineReader&, ncbi::objects::ILineErrorListener*)':
/usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/7/bits/stl_vector.h: In member function 'void ncbi::objects::CWiggleReader::xReadBedLine(const string&, ncbi::objects::ILineErrorListener*)':
/usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::SValueInfo*, std::vector<ncbi::objects::SValueInfo> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff3_sofa.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/objmgr_exception.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/prefetch_manager.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/prefetch_impl.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/prefetch_impl.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/prefetch_manager_impl.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/prefetch_manager_impl.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_info.cpp -o bioseq_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/data_source.cpp -o data_source.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/priority.cpp -o priority.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/prefetch_impl.cpp -o prefetch_impl.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/prefetch_manager.cpp -o prefetch_manager.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/prefetch_manager_impl.cpp -o prefetch_manager_impl.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blasIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/prefetch_manager.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/prefetch_actions.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/prefetch_actions.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/scope.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/scope.cpp:41:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff3_reader.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff3_reader.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff3_reader.cpp: In member function 'virtual bool ncbi::objects::CGff3Reader::xUpdateAnnotGeneric(const ncbi::objects::CGff2Record&, ncbi::CRef<ncbi::objects::CSeq_feat>, ncbi::CRef<ncbi::objects::CSeq_annot>, ncbi::objects::ILineErrorListener*)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff3_reader.cpp:603:10: warning: unused variable 'st' [-Wunused-variable]
auto st = pFeature->GetData().GetSubtype();
^~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/gtf_reader.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/reader_base.cpp -o reader_base.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/readfeat.cpp -o readfeat.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/rm_reader.cpp -o rm_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/wiggle_reader.cpp -o wiggle_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff3_sofa.cpp -o gff3_sofa.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff3_reader.cpp -o gff3_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/gtf_reader.cpp -o gtf_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-securitIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/gtf_reader.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/gtf_reader.cpp: In member function 'virtual bool ncbi::objects::CGtfReader::x_UpdateAnnotCds(const ncbi::objects::CGff2Record&, ncbi::CRef<ncbi::objects::CSeq_annot>)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/gtf_reader.cpp:363:10: warning: variable 'needXref' set but not used [-Wunused-but-set-variable]
bool needXref = false;
^~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_data.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/heap_scope.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/heap_scope.cpp:41:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_data.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/scope.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/scope_impl.cpp:41:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_reader.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/scope_info.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/scope_info.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_reader.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_reader.cpp: In member function 'virtual ncbi::CRef<ncbi::objects::CSeq_annot> ncbi::objects::CGff2Reader::ReadSeqAnnot(ncbi::ILineReader&, ncbi::objects::ILineErrorListener*)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_reader.cpp:217:30: warning: enum constant in boolean context [-Wint-in-bool-context]
if ((m_iFlags && fGenbankMode) ||
^~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_reader.cpp: In member function 'virtual void ncbi::objects::CGff2Reader::xPostProcessAnnot(ncbi::CRef<ncbi::objects::CSeq_annot>&, ncbi::objects::ILineErrorListener*)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_reader.cpp:323:23: warning: enum constant in boolean context [-Wint-in-bool-context]
if (!(m_iFlags && fGenbankMode)) {
^~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_reader.cpp: In member function 'bool ncbi::objects::CGff2Reader::xGetStartsOnPlusStrand(ncbi::TSeqPos, const std::vector<std::__cxx11::basic_string<char> >&, bool, std::vector<int>&) const':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_reader.cpp:1195:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for (auto i=0; i<gapCount; ++i) {
~^~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_reader.cpp: In member function 'bool ncbi::objects::CGff2Reader::xSetDensegStarts(const std::vector<std::__cxx11::basic_string<char> >&, ncbi::objects::ENa_strand, ncbi::objects::ENa_strand, ncbi::TSeqPos, ncbi::TSeqPos, const ncbi::objects::CGff2Record&, ncbi::objects::CSeq_align_Base::C_Segs::TDenseg&)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_reader.cpp:1282:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for (auto i=0; i<gapCount; ++i) {
~^~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_reader.cpp: In member function 'bool ncbi::objects::CGff2Reader::xAlignmentSetSpliced_seg(const ncbi::objects::CGff2Record&, ncbi::CRef<ncbi::objects::CSeq_align>)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_reader.cpp:1369:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for (auto i=0; i<gapCount; ++i) {
~^~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/tse_handle.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/tse_handle.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/gvf_reader.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/seq_map.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seq_map.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
t+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/prefetch_actions.cpp -o prefetch_actions.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/scope.cpp -o scope.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/heap_scope.cpp -o heap_scope.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/scope_impl.cpp -o scope_impl.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/scope_info.cpp -o scope_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/tse_handle.cpp -o tse_handle.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seq_map.cpp -o seq_map.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=6In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/gvf_reader.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/vcf_reader.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/seq_map.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/seq_map_ci.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seq_map_ci.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/best_feat_finder.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/best_feat_finder.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/seq_entry_ci.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seq_entry_ci.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_autoinit.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/source_mod_parser.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/source_mod_parser.cpp:38:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
y -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_data.cpp -o gff2_data.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_reader.cpp -o gff2_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/gvf_reader.cpp -o gvf_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/vcf_reader.cpp -o vcf_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/best_feat_finder.cpp -o best_feat_finder.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/source_mod_parser.cpp -o source_mod_parser.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta_exception.cpp -o fasta_exception.oIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_autoinit.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/source_mod_parser.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/source_mod_parser.cpp:38:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta_exception.cpp:35:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_converter.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/ucscregion_reader.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_converter.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/seq_annot_ci.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seq_annot_ci.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/ucscregion_reader.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/struct_cmt_reader.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/message_listener.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/message_listener.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/annot_collector.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/annot_types_ci.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/seq_table_ci.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seq_table_ci.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/seq_entry_handle.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seq_entry_handle.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/bioseq_set_handle.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_set_handle.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/line_error.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/line_error.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_converter.cpp -o agp_converter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/ucscregion_reader.cpp -o ucscregion_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/struct_cmt_reader.cpp -o struct_cmt_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/message_listener.cpp -o message_listener.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/readers/line_error.cpp -o line_error.o
/bin/rm -f libxobjread.so .libxobjread.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxobjread.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC read_util.o format_guess_ex.o acc_pattern.o agp_read.o agp_seq_entry.o agp_util.o agp_validate_reader.o aln_reader.o bed_reader.o cigar.o fasta.o fasta_aln_builder.o fasta_reader_utils.o getfeature.o gff_reader.o track_data.o reader_data.o microarray_reader.o phrap.o reader_base.o readfeat.o rm_reader.o wiggle_reader.o gff3_sofa.o gff3_reader.o gtf_reader.o gff2_data.o gff2_reader.o gvf_reader.o vcf_reader.o best_feat_finder.o source_mod_parser.o fasta_exception.o agp_converter.o ucscregion_reader.o struct_cmt_reader.o message_listener.o line_error.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blastIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/bioseq_handle.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_handle.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+-2.7.1/c++/BUILD/lib -lsubmit -lseqset -lseq -lseqcode -lsequtil -lgeneral -lcreaders -lxutil -lpub -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjread.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxobjread.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libxobjread.so
/bin/ln -f .xobjread.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.xobjread.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers'
4 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seq_map_ci.cpp -o seq_map_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seq_entry_ci.cpp -o seq_entry_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seq_annot_ci.cpp -o seq_annot_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seq_table_ci.cpp -o seq_table_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seq_entry_handle.cpp -o seq_entry_handle.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_set_handle.cpp -o bioseq_set_handle.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_handle.cpp -o bioseq_handle.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbiIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/seq_annot_handle.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seq_annot_handle.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/align_ci.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/align_ci.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/data_loader.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/data_loader.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/handle_range.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/handle_range.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/objmgr_exception.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seq_annot_handle.cpp -o seq_annot_handle.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/align_ci.cpp -o align_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/data_loader.cpp -o data_loader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/handle_range.cpp -o handle_range.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/objmgr_exception.cpp -o objmgr_exception.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/handle_range_map.cpp -o handle_range_map.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/handle_range.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/handle_range_map.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/handle_range_map.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/object_manager.cpp:39:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/bioseq_handle.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/seq_vector.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seq_vector.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/bioseq_handle.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/seq_vector.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seq_vector_ci.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Seq_descr.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/seq_descr_ci.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/seqdesc_ci.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seqdesc_ci.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/tse_split_info.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/tse_split_info.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
src/objmgr/object_manager.cpp -o object_manager.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seq_vector.cpp -o seq_vector.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seq_vector_ci.cpp -o seq_vector_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seqdesc_ci.cpp -o seqdesc_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/tse_split_info.cpp -o tse_split_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/tse_chunk_info.cpp -o tse_chunk_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_ci.cpp -o bioseq_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/builIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/tse_chunk_info.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/tse_chunk_info.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/bioseq_ci.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_ci.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/annot_type_index.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/seq_loc_mapper.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seq_loc_mapper.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/seq_align_mapper.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seq_align_mapper.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/annot_collector.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/annot_collector.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/data_loader_factory.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/data_loader_factory.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/annot_collector.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/annot_collector.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/mapped_feat.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/mapped_feat.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/seq_feat_handle.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seq_feat_handle.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
d/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/annot_type_index.cpp -o annot_type_index.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seq_loc_mapper.cpp -o seq_loc_mapper.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seq_align_mapper.cpp -o seq_align_mapper.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/annot_collector.cpp -o annot_collector.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/data_loader_factory.cpp -o data_loader_factory.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/mapped_feat.cpp -o mapped_feat.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seq_feat_handle.cpp -o seq_feat_handle.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-prIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/seq_graph_handle.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seq_graph_handle.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/seq_align_handle.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seq_align_handle.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/tse_info_object.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/seq_entry_info.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/tse_info.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/tse_assigner.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/scope.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/scope_transaction.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/scope_impl.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/scope_transaction_impl.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
otector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seq_graph_handle.cpp -o seq_graph_handle.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seq_align_handle.cpp -o seq_align_handle.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/tse_assigner.cpp -o tse_assigner.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/scope_transaction.cpp -o scope_transaction.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/scope_transaction_impl.cpp -o scope_transaction_impl.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/edit_commands_impl.cpp -o edit_commands_impl.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_edit_comIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/edit_commands_impl.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/edit_commands_impl.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/bioseq_edit_commands.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_edit_commands.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/seq_entry_edit_commands.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seq_entry_edit_commands.cpp:38:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/bioseq_set_edit_commands.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_set_edit_commands.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/edit_saver.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/edit_saver.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/unsupp_editsaver.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/unsupp_editsaver.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mands.cpp -o bioseq_edit_commands.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seq_entry_edit_commands.cpp -o seq_entry_edit_commands.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_set_edit_commands.cpp -o bioseq_set_edit_commands.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/edit_saver.cpp -o edit_saver.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/unsupp_editsaver.cpp -o unsupp_editsaver.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/edits_db_engine.cpp -o edits_db_engine.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/edits_db_saver.cpp -o edits_db_saver.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/edits_db_engine.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/edits_db_engine.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/edits_db_saver.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/edits_db_saver.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/annot_finder.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/annot_finder.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqset/Seq_entry_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqset/Seq_entry.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/gc_assembly_parser.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/gc_assembly_parser.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/split_parser.hpp:33,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/split_parser.cpp:32:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/seq_id_sort.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seq_id_sort.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:69:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/impl/seq_id_sort.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seq_id_sort.cpp:35:
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {ncbi::objects::CSortableSeq_id::SIdPart}; _Tp = ncbi::objects::CSortableSeq_id::SIdPart; _Alloc = std::allocator<ncbi::objects::CSortableSeq_id::SIdPart>]':
/usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector<ncbi::objects::CSortableSeq_id::SIdPart>::iterator {aka __gnu_cxx::__normal_iterator<ncbi::objects::CSortableSeq_id::SIdPart*, std::vector<ncbi::objects::CSortableSeq_id::SIdPart> >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector<ncbi::objects::CSortableSeq_id::SIdPart>::iterator {aka __gnu_cxx::__normal_iterator<ncbi::objects::CSortableSeq_id::SIdPart*, std::vector<ncbi::objects::CSortableSeq_id::SIdPart> >}' changed in GCC 7.1
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {ncbi::objects::CSortableSeq_id::SIdPart}; _Tp = ncbi::objects::CSortableSeq_id::SIdPart; _Alloc = std::allocator<ncbi::objects::CSortableSeq_id::SIdPart>]':
/usr/include/c++/7/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::CSortableSeq_id::SIdPart*, std::vector<ncbi::objects::CSortableSeq_id::SIdPart> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/annot_finder.cpp -o annot_finder.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/gc_assembly_parser.cpp -o gc_assembly_parser.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/split_parser.cpp -o split_parser.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/seq_id_sort.cpp -o seq_id_sort.o
/bin/rm -f libxobjmgr.so .libxobjmgr.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxobjmgr.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC seq_table_setters.o seq_table_info.o seq_annot_info.o table_field.o seq_map_switch.o snp_annot_info.o annot_types_ci.o seq_loc_cvt.o annot_selector.o seq_descr_ci.o feat_ci.o graph_ci.o annot_object.o annot_object_index.o annot_ci.o tse_info.o tse_info_object.o seq_entry_info.o bioseq_base_info.o bioseq_set_info.o bioseq_info.o data_source.o priority.o prefetch_impl.o prefetch_manager.o prefetch_manager_impl.o prefetch_actions.o scope.o heap_scope.o scope_impl.o scope_info.o tse_handle.o seq_map.o seq_map_ci.o seq_entry_ci.o seq_annot_ci.o seq_table_ci.o seq_entry_handle.o bioseq_set_handle.o bioseq_handle.o seq_annot_handle.o align_ci.o data_loader.o handle_range.o objmgr_exception.o handle_range_map.o object_manager.o seq_vector.o seq_vector_ci.o seqdesc_ci.o tse_split_info.o tse_chunk_info.o bioseq_ci.o annot_type_index.o seq_loc_mapper.o seq_align_mapper.o annot_collector.o data_loader_factory.o mapped_feat.o seq_feat_handle.o seq_graph_handle.o seq_align_handle.o tse_assigner.o scope_transaction.o scope_transaction_impl.o edit_commands_impl.o bioseq_edit_commands.o seq_entry_edit_commands.o bioseq_set_edit_commands.o edit_saver.o unsupp_editsaver.o edits_db_engine.o edits_db_saver.o annot_finder.o gc_assembly_parser.o split_parser.o seq_id_sort.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjmgr.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxobjmgr.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libxobjmgr.so
/bin/ln -f .xobjmgr.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.xobjmgr.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr'
cd objtools/blast/seqdb_reader/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=seqdb UNIX_PROJ="" sources= configurables=configurables.null
cd objmgr/util/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=util UNIX_PROJ="" sources= configurables=configurables.null
cd algo/dustmask/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=xalgodustmask UNIX_PROJ="" sources= configurables=configurables.null
cd objtools/data_loaders/genbank/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=ncbi_xreader UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader'
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util'
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask'
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/dustmask TMPL=xalgodustmask -w -j --jobserver-fds=3,4 all
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader TMPL=seqdb -w -j --jobserver-fds=3,4 all
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util TMPL=util -w -j --jobserver-fds=3,4 all
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank TMPL=ncbi_xreader -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/dustmask/symdust.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/dustmask/symdust.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/genbank/impl/dispatcher.hpp:34,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/dispatcher.cpp:31:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdb.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/weight.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/weight.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/dustmask/symdust.cpp -o symdust.o
/bin/rm -f libxalgodustmask.so .libxalgodustmask.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxalgodustmask.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC symdust.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lxobjmgr -lseq -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgodustmask.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxalgodustmask.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libxalgodustmask.so
/bin/ln -f .xalgodustmask.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.xalgodustmask.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask'
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbvol.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbbitset.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbbitset.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/objistr.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/feature.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbvol.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbfilter.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbfilter.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/genbank/reader.hpp:32,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/reader.cpp:31:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/objistr.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/feature.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/feature.cpp: In function 'ncbi::objects::feature::ELocationInFrame ncbi::objects::feature::IsLocationInFrame(const ncbi::objects::CSeq_feat_Handle&, const ncbi::objects::CSeq_loc&)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/feature.cpp:3391:89: warning: 'ncbi::objects::sequence::ECompare ncbi::objects::sequence::Compare(const ncbi::objects::CSeq_loc&, const ncbi::objects::CSeq_loc&, ncbi::objects::CScope*)' is deprecated [-Wdeprecated-declarations]
sequence::ECompare cmp = sequence::Compare(cds.GetLocation(), loc, &(cds.GetScope()));
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/util/feature.hpp:39:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/feature.cpp:84:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/util/seq_loc_util.hpp:200:20: note: declared here
sequence::ECompare Compare(const CSeq_loc& loc1,
^~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:69:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp:33:
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat, ncbi::CObjectCounterLocker> >&}; _Tp = std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >; _Alloc = std::allocator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > >]':
/usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > >::iterator {aka __gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp:160:13: warning: 'void ncbi::s_SeqDB_FileNotFound(const string&)' defined but not used [-Wunused-function]
static void s_SeqDB_FileNotFound(const string & fname)
^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/algorithm:62:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp:33:
/usr/include/c++/7/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<ncbi::objects::sequence::COverlapPairLess>]':
/usr/include/c++/7/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
__unguarded_linear_insert(_RandomAccessIterator __last,
^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<ncbi::objects::sequence::COverlapPairLess>]':
/usr/include/c++/7/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
__insertion_sort(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
In file included from /usr/include/c++/7/bits/char_traits.h:39:0,
from /usr/include/c++/7/string:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp:33:
/usr/include/c++/7/bits/stl_algobase.h: In function '_ForwardIterator std::__lower_bound(_ForwardIterator, _ForwardIterator, const _Tp&, _Compare) [with _ForwardIterator = __gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >; _Tp = std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >; _Compare = __gnu_cxx::__ops::_Iter_comp_val<ncbi::objects::sequence::COverlapPairLess>]':
/usr/include/c++/7/bits/stl_algobase.h:946:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
__lower_bound(_ForwardIterator __first, _ForwardIterator __last,
^~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algobase.h:946:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
In file included from /usr/include/c++/7/algorithm:62:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp:33:
/usr/include/c++/7/bits/stl_algo.h: In function '_ForwardIterator std::__upper_bound(_ForwardIterator, _ForwardIterator, const _Tp&, _Compare) [with _ForwardIterator = __gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >; _Tp = std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<ncbi::objects::sequence::COverlapPairLess>]':
/usr/include/c++/7/bits/stl_algo.h:2039:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
__upper_bound(_ForwardIterator __first, _ForwardIterator __last,
^~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:2039:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h: In function '_RandomAccessIterator std::_V2::__rotate(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, std::random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >]':
/usr/include/c++/7/bits/stl_algo.h:1328:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
__rotate(_RandomAccessIterator __first,
^~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1328:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h:1328:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h: In function 'void std::__merge_without_buffer(_BidirectionalIterator, _BidirectionalIterator, _BidirectionalIterator, _Distance, _Distance, _Compare) [with _BidirectionalIterator = __gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >; _Distance = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<ncbi::objects::sequence::COverlapPairLess>]':
/usr/include/c++/7/bits/stl_algo.h:2476:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
__merge_without_buffer(_BidirectionalIterator __first,
^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:2476:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h:2476:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h:2500:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
__second_cut
^~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:2509:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
__first_cut
^~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1444:40: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__iterator_category(__first));
^
/usr/include/c++/7/bits/stl_algo.h:2518:34: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__merge_without_buffer(__first, __first_cut, __new_middle,
~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__len11, __len22, __comp);
~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:2520:34: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__merge_without_buffer(__new_middle, __second_cut, __last,
~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__len1 - __len11, __len2 - __len22, __comp);
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In function 'void std::__inplace_stable_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<ncbi::objects::sequence::COverlapPairLess>]':
/usr/include/c++/7/bits/stl_algo.h:2761:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
__inplace_stable_sort(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:2761:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h:2766:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__insertion_sort(__first, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:2770:33: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__inplace_stable_sort(__first, __middle, __comp);
~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:2771:33: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__inplace_stable_sort(__middle, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:2772:34: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__merge_without_buffer(__first, __middle, __last,
~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
__middle - __first,
~~~~~~~~~~~~~~~~~~~
__last - __middle,
~~~~~~~~~~~~~~~~~~
__comp);
~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In function '_OutputIterator std::__move_merge(_InputIterator, _InputIterator, _InputIterator, _InputIterator, _OutputIterator, _Compare) [with _InputIterator = __gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >; _OutputIterator = std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<ncbi::objects::sequence::COverlapPairLess>]':
/usr/include/c++/7/bits/stl_algo.h:2639:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
__move_merge(_InputIterator __first1, _InputIterator __last1,
^~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:2639:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h:2639:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h:2639:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h: In function '_OutputIterator std::__move_merge(_InputIterator, _InputIterator, _InputIterator, _InputIterator, _OutputIterator, _Compare) [with _InputIterator = std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*; _OutputIterator = __gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<ncbi::objects::sequence::COverlapPairLess>]':
/usr/include/c++/7/bits/stl_algo.h:2639:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h: In function 'void std::__merge_sort_with_buffer(_RandomAccessIterator, _RandomAccessIterator, _Pointer, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >; _Pointer = std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<ncbi::objects::sequence::COverlapPairLess>]':
/usr/include/c++/7/bits/stl_algo.h:2705:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
__merge_sort_with_buffer(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:2705:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h:2695:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__insertion_sort(__first, __first + __chunk_size, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:2698:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__insertion_sort(__first, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:2674:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
__result = std::__move_merge(__first, __first + __step_size,
^~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:2674:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h:2682:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__move_merge(__first, __first + __step_size,
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__first + __step_size, __last, __result, __comp);
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:2682:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h:2674:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
__result = std::__move_merge(__first, __first + __step_size,
^~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:2682:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__move_merge(__first, __first + __step_size,
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__first + __step_size, __last, __result, __comp);
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:2682:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h:2698:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__insertion_sort(__first, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/genbank/writer.hpp:34,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/writer.cpp:31:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In function 'void std::__merge_adaptive(_BidirectionalIterator, _BidirectionalIterator, _BidirectionalIterator, _Distance, _Distance, _Pointer, _Distance, _Compare) [with _BidirectionalIterator = __gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >; _Distance = int; _Pointer = std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<ncbi::objects::sequence::COverlapPairLess>]':
/usr/include/c++/7/bits/stl_algo.h:2415:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
__merge_adaptive(_BidirectionalIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:2415:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h:2415:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h:2444:8: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
__second_cut
^~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:2453:8: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
__first_cut
^~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1444:40: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__iterator_category(__first));
^
/usr/include/c++/7/bits/stl_algo.h:2463:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__merge_adaptive(__first, __first_cut, __new_middle, __len11,
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__len22, __buffer, __buffer_size, __comp);
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:2465:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__merge_adaptive(__new_middle, __second_cut, __last,
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__len1 - __len11,
~~~~~~~~~~~~~~~~~
__len2 - __len22, __buffer,
~~~~~~~~~~~~~~~~~~~~~~~~~~~
__buffer_size, __comp);
~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In function 'void std::__stable_sort_adaptive(_RandomAccessIterator, _RandomAccessIterator, _Pointer, _Distance, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >; _Pointer = std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*; _Distance = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<ncbi::objects::sequence::COverlapPairLess>]':
/usr/include/c++/7/bits/stl_algo.h:2732:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
__stable_sort_adaptive(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:2732:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h:2741:31: note: parameter passing for argument of type 'const __gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__stable_sort_adaptive(__first, __middle, __buffer,
~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__buffer_size, __comp);
~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:2743:31: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__stable_sort_adaptive(__middle, __last, __buffer,
~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
__buffer_size, __comp);
~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:2748:33: note: parameter passing for argument of type 'const __gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__merge_sort_with_buffer(__first, __middle, __buffer, __comp);
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:2749:33: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__merge_sort_with_buffer(__middle, __last, __buffer, __comp);
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:2751:28: note: parameter passing for argument of type 'const __gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__merge_adaptive(__first, __middle, __last,
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
_Distance(__middle - __first),
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
_Distance(__last - __middle),
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__buffer, __buffer_size,
~~~~~~~~~~~~~~~~~~~~~~~~
__comp);
~~~~~~~
In file included from /usr/include/c++/7/vector:64:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp:33:
/usr/include/c++/7/bits/stl_vector.h: In function 'void ncbi::objects::sequence::GetOverlappingFeatures(const ncbi::objects::CSeq_loc&, ncbi::objects::CSeqFeatData_Base::E_Choice, ncbi::objects::CSeqFeatData::ESubtype, ncbi::objects::sequence::EOverlapType, ncbi::objects::sequence::TFeatScores&, ncbi::objects::CScope&, ncbi::objects::sequence::TBestFeatOpts, ncbi::objects::sequence::CGetOverlappingFeaturesPlugin*)':
/usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/7/algorithm:62:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp:33:
/usr/include/c++/7/bits/stl_algo.h:5006:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__inplace_stable_sort(__first, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:5008:29: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
std::__stable_sort_adaptive(__first, __last, __buf.begin(),
~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
_DistanceType(__buf.size()), __comp);
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:69:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/objistr.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/feature.cpp:33:
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::pair<long long int, ncbi::objects::CMappedFeat>&}; _Tp = std::pair<long long int, ncbi::objects::CMappedFeat>; _Alloc = std::allocator<std::pair<long long int, ncbi::objects::CMappedFeat> >]':
/usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector<std::pair<long long int, ncbi::objects::CMappedFeat> >::iterator {aka __gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::objects::CMappedFeat>*, std::vector<std::pair<long long int, ncbi::objects::CMappedFeat> > >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:64:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/objistr.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/feature.cpp:33:
/usr/include/c++/7/bits/stl_vector.h: In function 'void ncbi::objects::feature::GetOverlappingFeatures(ncbi::objects::CScope&, const ncbi::objects::CSeq_loc&, ncbi::objects::CSeqFeatData_Base::E_Choice, ncbi::objects::CSeqFeatData::ESubtype, ncbi::objects::sequence::EOverlapType, ncbi::objects::feature::TMappedFeatScores&, const ncbi::objects::SAnnotSelector*)':
/usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::objects::CMappedFeat>*, std::vector<std::pair<long long int, ncbi::objects::CMappedFeat> > >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::objects::CMappedFeat>*, std::vector<std::pair<long long int, ncbi::objects::CMappedFeat> > >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbalias.cpp:45:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:64:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp:33:
/usr/include/c++/7/bits/stl_vector.h: In function 'ncbi::CConstRef<ncbi::objects::CSeq_feat> ncbi::objects::sequence::GetBestMrnaForCds(const ncbi::objects::CSeq_feat&, ncbi::objects::CScope&, ncbi::objects::sequence::TBestFeatOpts, ncbi::objects::sequence::CGetOverlappingFeaturesPlugin*)':
/usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> >*, std::vector<std::pair<long long int, ncbi::CConstRef<ncbi::objects::CSeq_feat> > > >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/genbank/writer.hpp:34,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/processors.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp: In function 'void ncbi::SeqDB_ReadBinaryGiList(const string&, std::vector<int>&)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:809:26: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (((endp - beginp) < 2U)
~~~~~~~~~~~~~~~~^~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp: In function 'void ncbi::SeqDB_ReadMemoryGiList(const char*, const char*, std::vector<ncbi::CSeqDBGiList::SGiOid>&, bool*)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:886:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (((bendp - bbeginp) < 2U)
~~~~~~~~~~~~~~~~~~^~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/unicode.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/indexer.cpp:32:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:69:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:33:
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator {aka __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:64:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:33:
/usr/include/c++/7/bits/stl_vector.h: In member function 'void ncbi::CSeqDBGiList::GetTiList(std::vector<long long unsigned int>&) const':
/usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/7/bits/stl_vector.h: In member function 'ncbi::CRef<ncbi::CSeqDBNegativeList> ncbi::CSeqDBIdSet::GetNegativeList()':
/usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:69:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:33:
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long int&}; _Tp = long long int; _Alloc = std::allocator<long long int>]':
/usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector<long long int>::iterator {aka __gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long int}; _Tp = long long int; _Alloc = std::allocator<long long int>]':
/usr/include/c++/7/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:64:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:33:
/usr/include/c++/7/bits/stl_vector.h: In member function 'void ncbi::CSeqDBIdSet::x_BooleanSetOperation(ncbi::CSeqDBIdSet::EOperation, const std::vector<long long int>&, bool, const std::vector<long long int>&, bool, std::vector<long long int>&, bool&)':
/usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:69:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:33:
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {ncbi::CSeqDBGiList::STiOid}; _Tp = ncbi::CSeqDBGiList::STiOid; _Alloc = std::allocator<ncbi::CSeqDBGiList::STiOid>]':
/usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector<ncbi::CSeqDBGiList::STiOid>::iterator {aka __gnu_cxx::__normal_iterator<ncbi::CSeqDBGiList::STiOid*, std::vector<ncbi::CSeqDBGiList::STiOid> >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {ncbi::CSeqDBGiList::STiOid}; _Tp = ncbi::CSeqDBGiList::STiOid; _Alloc = std::allocator<ncbi::CSeqDBGiList::STiOid>]':
/usr/include/c++/7/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CSeqDBGiList::STiOid*, std::vector<ncbi::CSeqDBGiList::STiOid> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/unicode.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/indexer.cpp:32:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /usr/include/c++/7/algorithm:62:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:33:
/usr/include/c++/7/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/7/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
__insertion_sort(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/7/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ncbi::CSeqDBGiList::STiOid*, std::vector<ncbi::CSeqDBGiList::STiOid> >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<ncbi::CSeqDB_SortTiLessThan>]':
/usr/include/c++/7/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CSeqDBGiList::STiOid*, std::vector<ncbi::CSeqDBGiList::STiOid> >' changed in GCC 7.1
__unguarded_linear_insert(_RandomAccessIterator __last,
^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ncbi::CSeqDBGiList::STiOid*, std::vector<ncbi::CSeqDBGiList::STiOid> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<ncbi::CSeqDB_SortTiLessThan>]':
/usr/include/c++/7/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CSeqDBGiList::STiOid*, std::vector<ncbi::CSeqDBGiList::STiOid> >' changed in GCC 7.1
__insertion_sort(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CSeqDBGiList::STiOid*, std::vector<ncbi::CSeqDBGiList::STiOid> >' changed in GCC 7.1
In file included from /usr/include/c++/7/bits/stl_algo.h:61:0,
from /usr/include/c++/7/algorithm:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:33:
/usr/include/c++/7/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/7/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
__adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
^~~~~~~~~~~~~
In file included from /usr/include/c++/7/algorithm:62:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:33:
/usr/include/c++/7/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/7/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
__introsort_loop(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__introsort_loop(__cut, __last, __depth_limit, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In member function 'void ncbi::CSeqDBNegativeList::InsureOrder()':
/usr/include/c++/7/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__introsort_loop(__first, __last,
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
std::__lg(__last - __first) * 2,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__comp);
~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__insertion_sort(__first, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/bits/stl_algo.h:61:0,
from /usr/include/c++/7/algorithm:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:33:
/usr/include/c++/7/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >; _Distance = int; _Tp = long long int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/7/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
__adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
^~~~~~~~~~~~~
In file included from /usr/include/c++/7/algorithm:62:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:33:
/usr/include/c++/7/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/7/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
__introsort_loop(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
std::__introsort_loop(__cut, __last, __depth_limit, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In static member function 'static void ncbi::CSeqDBIdSet::x_SortAndUnique(std::vector<long long int>&)':
/usr/include/c++/7/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
std::__introsort_loop(__first, __last,
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
std::__lg(__last - __first) * 2,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__comp);
~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
std::__insertion_sort(__first, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/bits/stl_algo.h:61:0,
from /usr/include/c++/7/algorithm:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:33:
/usr/include/c++/7/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ncbi::CSeqDBGiList::STiOid*, std::vector<ncbi::CSeqDBGiList::STiOid> >; _Distance = int; _Tp = ncbi::CSeqDBGiList::STiOid; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<ncbi::CSeqDB_SortTiLessThan>]':
/usr/include/c++/7/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CSeqDBGiList::STiOid*, std::vector<ncbi::CSeqDBGiList::STiOid> >' changed in GCC 7.1
__adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
^~~~~~~~~~~~~
In file included from /usr/include/c++/7/algorithm:62:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/metareg.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:33:
/usr/include/c++/7/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ncbi::CSeqDBGiList::STiOid*, std::vector<ncbi::CSeqDBGiList::STiOid> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<ncbi::CSeqDB_SortTiLessThan>]':
/usr/include/c++/7/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CSeqDBGiList::STiOid*, std::vector<ncbi::CSeqDBGiList::STiOid> >' changed in GCC 7.1
__introsort_loop(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CSeqDBGiList::STiOid*, std::vector<ncbi::CSeqDBGiList::STiOid> >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CSeqDBGiList::STiOid*, std::vector<ncbi::CSeqDBGiList::STiOid> >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CSeqDBGiList::STiOid*, std::vector<ncbi::CSeqDBGiList::STiOid> >' changed in GCC 7.1
std::__introsort_loop(__cut, __last, __depth_limit, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In function 'void ncbi::s_InsureOrder(TVector&) [with TCompare = ncbi::CSeqDB_SortTiLessThan; TVector = std::vector<ncbi::CSeqDBGiList::STiOid>]':
/usr/include/c++/7/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CSeqDBGiList::STiOid*, std::vector<ncbi::CSeqDBGiList::STiOid> >' changed in GCC 7.1
std::__introsort_loop(__first, __last,
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
std::__lg(__last - __first) * 2,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__comp);
~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CSeqDBGiList::STiOid*, std::vector<ncbi::CSeqDBGiList::STiOid> >' changed in GCC 7.1
std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CSeqDBGiList::STiOid*, std::vector<ncbi::CSeqDBGiList::STiOid> >' changed in GCC 7.1
std::__insertion_sort(__first, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/indexer.cpp: In member function 'void ncbi::objects::CBioseqIndex::x_InitFeats()':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/indexer.cpp:1030:20: warning: variable 'sgx' set but not used [-Wunused-but-set-variable]
CGapIndex* sgx = NULL;
^~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/indexer.cpp:42:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/util/indexer.hpp: In constructor 'ncbi::objects::CGapIndex::CGapIndex(ncbi::TSeqPos, ncbi::TSeqPos, ncbi::TSeqPos, const string&, const std::vector<std::__cxx11::basic_string<char> >&, bool, bool, ncbi::objects::CBioseqIndex&)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/util/indexer.hpp:576:10: warning: 'ncbi::objects::CGapIndex::m_IsAssemblyGap' will be initialized after [-Wreorder]
bool m_IsAssemblyGap;
^~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/util/indexer.hpp:566:28: warning: 'ncbi::CWeakRef<ncbi::objects::CBioseqIndex> ncbi::objects::CGapIndex::m_Bsx' [-Wreorder]
CWeakRef<CBioseqIndex> m_Bsx;
^~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/indexer.cpp:1362:1: warning: when initialized here [-Wreorder]
CGapIndex::CGapIndex (TSeqPos start,
^~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/indexer.cpp: In function 'int ncbi::objects::SkipMixedContent(const char*)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/indexer.cpp:1835:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for (int i = 0; i < sizeof (mixedTags); i++) {
~~^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/indexer.cpp: In member function 'void ncbi::objects::CWordPairIndexer::PopulateWordPairIndex(std::__cxx11::string)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/indexer.cpp:1912:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for (int i = 0; i < str.length(); i++) {
~~^~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/seqtitle.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdb.cpp -o seqdb.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbbitset.cpp -o seqdbbitset.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbfilter.cpp -o seqdbfilter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp -o seqdbatlas.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbalias.cpp -o seqdbalias.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp -o seqdbcommon.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/buIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/seqtitle.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbgeneral.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbfile.hpp:45,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbfile.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/reader_snp.cpp:32:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbvol.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbvolset.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbimpl.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbimpl.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/strsearch.hpp:45,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/util/create_defline.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/strsearch.hpp:45,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/util/create_defline.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/weight.cpp -o weight.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp -o sequence.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/feature.cpp -o feature.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/indexer.cpp -o indexer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/seqtitle.cpp -o seqtitle.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp -o create_defline.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/util/obj_sniff.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/obj_sniff.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp: In function 'bool x_EndsWithStrain(const ncbi::CTempString&, const ncbi::CTempString&)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:1137:80: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::FindNoCase(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, ncbi::NStr::EOccurrence)' is deprecated [-Wdeprecated-declarations]
pos = NStr::FindNoCase (taxname, strain, 0, taxname.size() - 1, NStr::eLast);
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/strsearch.hpp:45,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/util/create_defline.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:2082:22: note: declared here
static SIZE_TYPE FindNoCase(const CTempString str,
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp: In function 'std::__cxx11::string s_RemoveBracketedOrgFromEnd(std::__cxx11::string, std::__cxx11::string)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:1716:61: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::Find(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, ncbi::NStr::EOccurrence, ncbi::NStr::ECase)' is deprecated [-Wdeprecated-declarations]
SIZE_TYPE cp = NStr::Find(str, "[", 0, NPOS, NStr::eLast);
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/strsearch.hpp:45,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/util/create_defline.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:5473:11: note: declared here
SIZE_TYPE NStr::Find(const CTempString str, const CTempString pattern,
^~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp: In member function 'void ncbi::objects::sequence::CDeflineGenerator::x_SetTitleFromProteinIdx(const ncbi::objects::CBioseq_Handle&)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:1782:38: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (offset > 0 && offset < m_MainTitle.length()) {
~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp: In member function 'void ncbi::objects::sequence::CDeflineGenerator::x_SetTitleFromProtein(const ncbi::objects::CBioseq_Handle&)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:1980:38: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (offset > 0 && offset < m_MainTitle.length()) {
~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp: In function 'size_t s_TitleEndsInOrganism(std::__cxx11::string&, ncbi::CTempString)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:2595:68: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::FindNoCase(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, ncbi::NStr::EOccurrence)' is deprecated [-Wdeprecated-declarations]
pos = NStr::FindNoCase(title, taxname, 0, NPOS, NStr::eLast);
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/strsearch.hpp:45,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/util/create_defline.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:2082:22: note: declared here
static SIZE_TYPE FindNoCase(const CTempString str,
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:2596:17: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (pos == idx + 2) {
~~~~^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp: In member function 'void ncbi::objects::sequence::CDeflineGenerator::x_AdjustProteinTitleSuffix(const ncbi::objects::CBioseq_Handle&)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:2654:83: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::FindNoCase(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, ncbi::NStr::EOccurrence)' is deprecated [-Wdeprecated-declarations]
pos = NStr::FindNoCase(m_MainTitle, "][", 0, NPOS, NStr::eLast);
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/strsearch.hpp:45,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/util/create_defline.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:2082:22: note: declared here
static SIZE_TYPE FindNoCase(const CTempString str,
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp: In member function 'std::__cxx11::string ncbi::objects::sequence::CDeflineGenerator::GenerateDefline(const ncbi::objects::CBioseq_Handle&, ncbi::objects::sequence::CDeflineGenerator::TUserFlags)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:2981:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for (int i = 0; i < sizeof (s_tpaPrefixList) / sizeof (const char*); i++) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:69:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/util/obj_sniff.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/obj_sniff.cpp:33:
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {ncbi::objects::CObjectsSniffer::SObjectDescription}; _Tp = ncbi::objects::CObjectsSniffer::SObjectDescription; _Alloc = std::allocator<ncbi::objects::CObjectsSniffer::SObjectDescription>]':
/usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector<ncbi::objects::CObjectsSniffer::SObjectDescription>::iterator {aka __gnu_cxx::__normal_iterator<ncbi::objects::CObjectsSniffer::SObjectDescription*, std::vector<ncbi::objects::CObjectsSniffer::SObjectDescription> >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {ncbi::objects::CObjectsSniffer::SObjectDescription}; _Tp = ncbi::objects::CObjectsSniffer::SObjectDescription; _Alloc = std::allocator<ncbi::objects::CObjectsSniffer::SObjectDescription>]':
/usr/include/c++/7/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::objects::CObjectsSniffer::SObjectDescription*, std::vector<ncbi::objects::CObjectsSniffer::SObjectDescription> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/genbank/seqref.hpp:34,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/seqref.cpp:31:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/dispatcher.cpp -o dispatcher.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/reader.cpp -o reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/writer.cpp -o writer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/processors.cpp -o processors.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/reader_snp.cpp -o reader_snp.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/seqref.cpp -o seqref.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-seIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/seq_loc_util.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/genbank/blob_id.hpp:34,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/blob_id.cpp:31:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbvol.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/seq_loc_util.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/genbank/impl/request_result.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/request_result.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbvol.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp: In member function 'void ncbi::CSeqDBVol::GetRawSeqAndAmbig(int, const char**, int*, int*, ncbi::CSeqDBLockHold&) const':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp:2623:11: warning: variable 'map_end' set but not used [-Wunused-but-set-variable]
TIndx map_end = 0;
^~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/reader_id1_base.cpp:31:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/seq_align_util.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/util/sequence.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/seq_trimmer.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/seq_align_util.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbvol.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbvolset.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbvolset.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/util/sequence.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/seq_trimmer.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/reader_id2_base.cpp:32:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/reader_service.cpp:31:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdboidlist.cpp:34:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/util/sequence.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/bioseqgaps_ci.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/util/sequence.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/bioseqgaps_ci.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/objutil.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbgeneral.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbfile.hpp:45,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbisam.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp: In member function 'ncbi::CSeqDBIsam::EErrorCode ncbi::CSeqDBIsam::x_StringSearch(const string&, std::vector<std::__cxx11::basic_string<char> >&, std::vector<std::__cxx11::basic_string<char> >&, std::vector<long long int>&)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp:1001:9: warning: variable 'found_short' set but not used [-Wunused-but-set-variable]
int found_short(-1);
^~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/objutil.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/objutil.cpp: In instantiation of 'bool ncbi::objects::{anonymous}::s_IsTagStart(const _T&, const _T&) [with _T = const char*]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/objutil.cpp:1805:81: required from here
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/objutil.cpp:1733:57: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for (int possible_str_idx = 0; possible_str_idx < num_possible_tag_starts; ++possible_str_idx) {
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
ild/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbfile.cpp -o seqdbfile.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbimpl.cpp -o seqdbimpl.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp -o seqdbvol.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbvolset.cpp -o seqdbvolset.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdboidlist.cpp -o seqdboidlist.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp -o seqdbisam.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSETIn file included from /usr/include/c++/7/vector:69:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbgeneral.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbfile.hpp:45,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbisam.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp:34:
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long int}; _Tp = long long int; _Alloc = std::allocator<long long int>]':
/usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector<long long int>::iterator {aka __gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long int}; _Tp = long long int; _Alloc = std::allocator<long long int>]':
/usr/include/c++/7/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbtax.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbtax.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/algorithm:62:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbgeneral.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbfile.hpp:45,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbisam.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp:34:
/usr/include/c++/7/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/7/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
__insertion_sort(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
In file included from /usr/include/c++/7/bits/stl_algo.h:61:0,
from /usr/include/c++/7/algorithm:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbgeneral.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbfile.hpp:45,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbisam.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp:34:
/usr/include/c++/7/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/7/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
__adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
^~~~~~~~~~~~~
In file included from /usr/include/c++/7/algorithm:62:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbgeneral.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbfile.hpp:45,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbisam.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp:34:
/usr/include/c++/7/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/7/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
__introsort_loop(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__introsort_loop(__cut, __last, __depth_limit, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In member function 'void ncbi::CSeqDBIsam::IdsToOids(int, int, ncbi::CSeqDBNegativeList&)':
/usr/include/c++/7/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__introsort_loop(__first, __last,
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
std::__lg(__last - __first) * 2,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__comp);
~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
std::__insertion_sort(__first, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/genbank/impl/incr_time.hpp:33,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/incr_time.cpp:31:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbgilistset.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbgilistset.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbexpert.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbexpert.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/feature_edit.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
curity -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/blob_id.cpp -o blob_id.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/request_result.cpp -o request_result.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/reader_id1_base.cpp -o reader_id1_base.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/reader_id2_base.cpp -o reader_id2_base.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/reader_service.cpp -o reader_service.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/incr_time.cpp -o incr_time.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/genbank/impl/info_cache.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/info_cache.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/obj_sniff.cpp -o obj_sniff.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/seq_loc_util.cpp -o seq_loc_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/seq_align_util.cpp -o seq_align_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/seq_trimmer.cpp -o seq_trimmer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/bioseqgaps_ci.cpp -o bioseqgaps_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/objutil.cpp -o objutil.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/feature_edit.cpp -o feature_edit.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbblob.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbblob.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/util/autodef.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/column_reader.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcol.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/util/autodef.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
cd algo/segmask/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=xalgosegmask UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/segmask TMPL=xalgosegmask -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/bioseq_handle.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/seq_vector.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/segmask/segmask.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/segmask/segmask.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
blast+-2.7.1/c++/src/objtools/data_loaders/genbank/info_cache.cpp -o info_cache.o
/bin/rm -f libncbi_xreader.a .libncbi_xreader.a.stamp
ar cr libncbi_xreader.a dispatcher.o reader.o writer.o processors.o reader_snp.o seqref.o blob_id.o request_result.o reader_id1_base.o reader_id2_base.o reader_service.o incr_time.o info_cache.o
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader.a /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libncbi_xreader.a /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libncbi_xreader.a
/bin/rm -f libncbi_xreader.so .libncbi_xreader.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libncbi_xreader.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC dispatcher.o reader.o writer.o processors.o reader_snp.o seqref.o blob_id.o request_result.o reader_id1_base.o reader_id2_base.o reader_service.o incr_time.o info_cache.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxconnect -lxcompress -lxser -lsequtil -lxutil -lxncbi -lz -lbz2 -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libncbi_xreader.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libncbi_xreader.so
/bin/ln -f .ncbi_xreader-static.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.ncbi_xreader-static.dep
/bin/ln -f .ncbi_xreader.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.ncbi_xreader.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
cd objmgr/split/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=id2_split UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/split TMPL=id2_split -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbgimask.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbgimask.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/split/blob_splitter.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/split/blob_splitter.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/segmask/segmask.cpp -o segmask.o
/bin/rm -f libxalgosegmask.so .libxalgosegmask.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxalgosegmask.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC segmask.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast -lxobjmgr -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgosegmask.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxalgosegmask.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libxalgosegmask.so
/bin/ln -f .xalgosegmask.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.xalgosegmask.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask'
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/split/blob_splitter_params.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/split/blob_splitter_params.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/split/split_blob.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/split/split_blob.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbtax.cpp -o seqdbtax.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbgilistset.cpp -o seqdbgilistset.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbexpert.cpp -o seqdbexpert.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbblob.cpp -o seqdbblob.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcol.cpp -o seqdbcol.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbgimask.cpp -o seqdbgimask.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/inclIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbobj.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/split/blob_splitter_impl.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/split/blob_splitter_impl.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/util/autodef.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_feature_clause_base.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/util/autodef_source_desc.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_source_desc.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/util/autodef.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_feature_clause_base.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/util/autodef_source_desc.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_source_desc.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
ude /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbobj.cpp -o seqdbobj.o
/bin/rm -f libseqdb.so .libseqdb.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libseqdb.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC seqdb.o seqdbbitset.o seqdbfilter.o seqdbatlas.o seqdbalias.o seqdbcommon.o seqdbfile.o seqdbimpl.o seqdbvol.o seqdbvolset.o seqdboidlist.o seqdbisam.o seqdbtax.o seqdbgilistset.o seqdbexpert.o seqdbblob.o seqdbcol.o seqdbgimask.o seqdbobj.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lblastdb -lxobjmgr -lseq -lgeneral -lxser -lsequtil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqdb.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libseqdb.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libseqdb.so
/bin/ln -f .seqdb.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.seqdb.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader'
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/split/blob_splitter_impl.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/split/blob_splitter_parser.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/split/blob_splitter_impl.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/split/blob_splitter_maker.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cd objtools/data_loaders/genbank/cache/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=ncbi_xreader_cache UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/cache TMPL=ncbi_xreader_cache -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/split/blob_splitter_impl.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/split/blob_splitter_maker.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/genbank/reader.hpp:32,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/genbank/cache/reader_cache.hpp:33,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/cache/reader_cache.cpp:31:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/util/autodef.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_available_modifier.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/util/autodef.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_available_modifier.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Seq_descr.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/seq_descr_ci.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/seqdesc_ci.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_mod_combo.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cd objtools/data_loaders/genbank/id1/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=ncbi_xreader_id1 UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/id1 TMPL=ncbi_xreader_id1 -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/id1/reader_id1.cpp:32:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Seq_descr.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/seq_descr_ci.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/seqdesc_ci.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_mod_combo.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/genbank/writer.hpp:34,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/genbank/cache/writer_cache.hpp:33,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/cache/writer_cache.cpp:31:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/split/blob_splitter.cpp -o blob_splitter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/split/blob_splitter_params.cpp -o blob_splitter_params.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/split/split_blob.cpp -o split_blob.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/split/blob_splitter_impl.cpp -o blob_splitter_impl.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/split/blob_splitter_parser.cpp -o blob_splitter_parser.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/split/blob_splitter_maker.cpp -o blob_splitter_maker.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=formatIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Seq_descr.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/seq_descr_ci.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/seqdesc_ci.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_source_group.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/split/id_range.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/split/id_range.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Seq_descr.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/seq_descr_ci.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/seqdesc_ci.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_source_group.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/id1/reader_id1.cpp -o reader_id1.o
/bin/rm -f libncbi_xreader_id1.a .libncbi_xreader_id1.a.stamp
ar cr libncbi_xreader_id1.a reader_id1.o
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id1.a /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libncbi_xreader_id1.a /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libncbi_xreader_id1.a
/bin/rm -f libncbi_xreader_id1.so .libncbi_xreader_id1.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libncbi_xreader_id1.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC reader_id1.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxconnect -lxcompress -lxser -lsequtil -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id1.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libncbi_xreader_id1.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libncbi_xreader_id1.so
/bin/ln -f .ncbi_xreader_id1-static.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.ncbi_xreader_id1-static.dep
/bin/ln -f .ncbi_xreader_id1.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.ncbi_xreader_id1.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1'
cd objtools/data_loaders/genbank/id2/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=ncbi_xreader_id2 UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/id2 TMPL=ncbi_xreader_id2 -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/split/object_splitinfo.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/split/object_splitinfo.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef.cpp -o autodef.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_feature_clause_base.cpp -o autodef_feature_clause_base.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_source_desc.cpp -o autodef_source_desc.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_available_modifier.cpp -o autodef_available_modifier.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_mod_combo.cpp -o autodef_mod_combo.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_source_group.cpp -o autodef_source_group.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/incmake[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/cache/reader_cache.cpp -o reader_cache.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/cache/writer_cache.cpp -o writer_cache.o
/bin/rm -f libncbi_xreader_cache.a .libncbi_xreader_cache.a.stamp
ar cr libncbi_xreader_cache.a reader_cache.o writer_cache.o
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_cache.a /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libncbi_xreader_cache.a /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libncbi_xreader_cache.a
/bin/rm -f libncbi_xreader_cache.so .libncbi_xreader_cache.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libncbi_xreader_cache.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC reader_cache.o writer_cache.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxconnect -lxcompress -lxser -lsequtil -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_cache.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libncbi_xreader_cache.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libncbi_xreader_cache.so
/bin/ln -f .ncbi_xreader_cache-static.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.ncbi_xreader_cache-static.dep
/bin/ln -f .ncbi_xreader_cache.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.ncbi_xreader_cache.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache'
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/id2/reader_id2.cpp:32:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/util/autodef.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_feature_clause.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/util/autodef.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_feature_clause.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/util/autodef_options.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_options.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/util/autodef_options.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_options.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_feature_clause.cpp: In member function 'bool ncbi::objects::CAutoDefFeatureClause::x_GetExonDescription(std::__cxx11::string&)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_feature_clause.cpp:725:28: warning: unused variable 'subtype' [-Wunused-variable]
CSeqFeatData::ESubtype subtype = m_MainFeat.GetData().GetSubtype();
^~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/split/asn_sizer.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/split/asn_sizer.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/split/annot_piece.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/split/annot_piece.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/split/chunk_info.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/split/chunk_info.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/id2/reader_id2.cpp -o reader_id2.o
/bin/rm -f libncbi_xreader_id2.a .libncbi_xreader_id2.a.stamp
ar cr libncbi_xreader_id2.a reader_id2.o
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id2.a /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libncbi_xreader_id2.a /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libncbi_xreader_id2.a
/bin/rm -f libncbi_xreader_id2.so .libncbi_xreader_id2.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libncbi_xreader_id2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC reader_id2.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxconnect -lxcompress -lxser -lsequtil -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id2.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libncbi_xreader_id2.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libncbi_xreader_id2.so
/bin/ln -f .ncbi_xreader_id2-static.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.ncbi_xreader_id2-static.dep
/bin/ln -f .ncbi_xreader_id2.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.ncbi_xreader_id2.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2'
lude /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_feature_clause.cpp -o autodef_feature_clause.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_options.cpp -o autodef_options.o
/bin/rm -f libxobjutil.so .libxobjutil.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxobjutil.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC weight.o sequence.o feature.o indexer.o seqtitle.o create_defline.o obj_sniff.o seq_loc_util.o seq_align_util.o seq_trimmer.o bioseqgaps_ci.o objutil.o feature_edit.o autodef.o autodef_feature_clause_base.o autodef_source_desc.o autodef_available_modifier.o autodef_mod_combo.o autodef_source_group.o autodef_feature_clause.o autodef_options.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lxobjmgr -lseqset -lseq -lpub -lbiblio -lgeneral -lxser -lsequtil -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjutil.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxobjutil.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libxobjutil.so
/bin/ln -f .xobjutil.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.xobjutil.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util'
cd objtools/data_loaders/blastdb/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=ncbi_xloader_blastdb UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb TMPL=ncbi_xloader_blastdb -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/split/size.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/split/size.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cd objtools/cleanup/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=cleanup UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/cleanup TMPL=cleanup -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/blastdb/bdbloader.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb/bdbloader.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqset/Seq_entry_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqset/Seq_entry.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/autogenerated_cleanup.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/autogenerated_cleanup.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqset/Seq_entry_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqset/Seq_entry.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/autogenerated_extended_cleanup.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/autogenerated_extended_cleanup.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqset/Seq_entry_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqset/Seq_entry.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/autogenerated_extended_cleanup.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/autogenerated_extended_cleanup.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqset/Seq_entry_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqset/Seq_entry.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/autogenerated_cleanup.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/autogenerated_cleanup.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/split/id_range.cpp -o id_range.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/split/object_splitinfo.cpp -o object_splitinfo.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/split/asn_sizer.cpp -o asn_sizer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/split/annot_piece.cpp -o annot_piece.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/split/chunk_info.cpp -o chunk_info.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/split/size.cpp -o size.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objmgr/split/split_exceptions.cpp -o split_exceptions.o
/bin/rm -f libid2_split.so .libid2_split.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libid2_split.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blob_splitter.o blob_splitter_params.o split_blob.o blob_splitter_impl.o blob_splitter_parser.o blob_splitter_maker.o id_range.o object_splitinfo.o asn_sizer.o annot_piece.o chunk_info.o size.o split_exceptions.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lxobjmgr -lseqsplit -lseqset -lseq -lgeneral -lxser -lxcompress -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid2_split.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libid2_split.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libid2_split.so
/bin/ln -f .id2_split.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.id2_split.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split'
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/blastdb/bdbloader.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb/cached_sequence.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb/cached_sequence.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cd objtools/blast/seqdb_writer/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=writedb UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer TMPL=writedb -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb_error.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb_error.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_impl.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/blastdb/blastdb_adapter.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb/local_blastdb_adapter.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb/local_blastdb_adapter.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb_error.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_impl.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/cleanup.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/algorithm:62:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb_error.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb.cpp:33:
/usr/include/c++/7/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/7/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
__insertion_sort(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
In file included from /usr/include/c++/7/bits/stl_algo.h:61:0,
from /usr/include/c++/7/algorithm:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb_error.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb.cpp:33:
/usr/include/c++/7/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >; _Distance = int; _Tp = long long int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/7/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
__adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
^~~~~~~~~~~~~
In file included from /usr/include/c++/7/algorithm:62:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb_error.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb.cpp:33:
/usr/include/c++/7/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/7/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
__introsort_loop(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
std::__introsort_loop(__cut, __last, __depth_limit, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In member function 'void ncbi::CBinaryListBuilder::Write(ncbi::CNcbiOstream&)':
/usr/include/c++/7/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
std::__introsort_loop(__first, __last,
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
std::__lg(__last - __first) * 2,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__comp);
~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
std::__insertion_sort(__first, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/cleanup.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb/bdbloader.cpp -o bdbloader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb/cached_sequence.cpp -o cached_sequence.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb/local_blastdb_adapter.cpp -o local_blastdb_adapter.o
/bin/rm -f libncbi_xloader_blastdb.so .libncbi_xloader_blastdb.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libncbi_xloader_blastdb.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC bdbloader.o cached_sequence.o local_blastdb_adapter.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqdb -lxobjmgr -lseqset -lseq -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_blastdb.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libncbi_xloader_blastdb.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libncbi_xloader_blastdb.so
/bin/ln -f .ncbi_xloader_blastdb.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.ncbi_xloader_blastdb.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb_error.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_volume.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_volume.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/cleanup_utils.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/cleanup.cpp: In static member function 'static bool ncbi::objects::CCleanup::x_HasShortIntron(const ncbi::objects::CSeq_loc&, size_t)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/cleanup.cpp:2623:68: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (abs((long int)this_start - (long int)prev_end) < min_len) {
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/cleanup_utils.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Align_def_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Align_def.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/seq__.hpp:1,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb_general.hpp:45,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb_files.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_files.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb_error.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_isam.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_files.cpp: In constructor 'ncbi::CWriteDB_File::CWriteDB_File(const string&, const string&, int, Uint8, bool)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_files.cpp:113:22: warning: unused variable 'MAX_OFFSET_BITS' [-Wunused-variable]
static const int MAX_OFFSET_BITS = (sizeof m_Offset * 8) - 1;
^~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_files.cpp: In member function 'int ncbi::CWriteDB_File::Write(const ncbi::CTempString&)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_files.cpp:149:22: warning: unused variable 'MAX_OFFSET_BITS' [-Wunused-variable]
static const int MAX_OFFSET_BITS = (sizeof m_Offset * 8) - 1;
^~~~~~~~~~~~~~~
cd objtools/blast/gene_info_reader/demo/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=gene_info_reader LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/demo'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/gene_info_reader/demo TMPL=gene_info_reader -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/gene_info_reader/demo/gene_info_reader_app.cpp:38:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb_error.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_gimask.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:69:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_isam.cpp:33:
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ncbi::CWriteDB_IsamIndex::SIdOid&}; _Tp = ncbi::CWriteDB_IsamIndex::SIdOid; _Alloc = std::allocator<ncbi::CWriteDB_IsamIndex::SIdOid>]':
/usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector<ncbi::CWriteDB_IsamIndex::SIdOid>::iterator {aka __gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:64:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_isam.cpp:33:
/usr/include/c++/7/bits/stl_vector.h: In member function 'void ncbi::CWriteDB_IsamIndex::x_AddTraceIds(int, const TIdList&)':
/usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/7/bits/stl_vector.h: In member function 'void ncbi::CWriteDB_IsamIndex::x_AddGis(int, const TIdList&)':
/usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/7/bits/stl_vector.h: In member function 'void ncbi::CWriteDB_IsamIndex::AddPig(int, int)':
/usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/7/algorithm:62:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbictype.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistre.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_stack.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_isam.cpp:33:
/usr/include/c++/7/bits/stl_algo.h: In function 'void std::__move_median_to_first(_Iterator, _Iterator, _Iterator, _Iterator, _Compare) [with _Iterator = __gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/7/bits/stl_algo.h:78:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
__move_median_to_first(_Iterator __result,_Iterator __a, _Iterator __b,
^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:78:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h:78:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h:78:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >; _Compare = __gnu_cxx::__ops::_Val_less_iter]':
/usr/include/c++/7/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
__unguarded_linear_insert(_RandomAccessIterator __last,
^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/7/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
__insertion_sort(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
In file included from /usr/include/c++/7/bits/stl_algo.h:61:0,
from /usr/include/c++/7/algorithm:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbictype.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistre.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_stack.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_isam.cpp:33:
/usr/include/c++/7/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >; _Distance = int; _Tp = ncbi::CWriteDB_IsamIndex::SIdOid; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/7/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
__adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
^~~~~~~~~~~~~
In file included from /usr/include/c++/7/algorithm:62:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbictype.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistre.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_stack.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_isam.cpp:33:
/usr/include/c++/7/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/7/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
__introsort_loop(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h:1921:34: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
std::__move_median_to_first(__first, __first + 1, __mid, __last - 1,
~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__comp);
~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1921:34: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
std::__introsort_loop(__cut, __last, __depth_limit, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In member function 'void ncbi::CWriteDB_IsamIndex::x_FlushNumericIndex()':
/usr/include/c++/7/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
std::__introsort_loop(__first, __last,
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
std::__lg(__last - __first) * 2,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__comp);
~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CWriteDB_IsamIndex::SIdOid*, std::vector<ncbi::CWriteDB_IsamIndex::SIdOid> >' changed in GCC 7.1
std::__insertion_sort(__first, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
cd objtools/blast/seqdb_reader/demo/ && NCBI_BUT_EXPENDABLE=' (but expendable)' /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=seqdb_demo LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/demo'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/demo TMPL=seqdb_demo -w -j --jobserver-fds=3,4 all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/demo'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/gene_info_reader/demo/gene_info_reader_app.cpp -o gene_info_reader_app.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie gene_info_reader_app.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lgene_info -lxobjutil -lseqdb -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -ldl -lm -lpthread -o gene_info_reader
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f gene_info_reader /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f gene_info_reader /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/gene_info_reader
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/demo'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/demo'
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/demo/seqdb_demo.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_autoinit.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/newcleanupp.cpp:39:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_autoinit.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/newcleanupp.cpp:39:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb.cpp -o writedb.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_impl.cpp -o writedb_impl.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_volume.cpp -o writedb_volume.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_files.cpp -o writedb_files.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_isam.cpp -o writedb_isam.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_gimask.cpp -o writedb_gimask.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/sequtil/sequtil_convert.hpp:34,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_convert.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Align_def_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Align_def.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/seq__.hpp:1,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb_general.hpp:45,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_general.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/demo'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/demo/seqdb_demo.cpp -o seqdb_demo.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie seqdb_demo.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqdb -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -ldl -lm -lpthread -o seqdb_demo
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_demo /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f seqdb_demo /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/seqdb_demo
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/demo'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/demo'
cd objtools/blast/seqdb_reader/test/ && NCBI_BUT_EXPENDABLE=' (but expendable)' /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=seqdb_perf LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/test'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/test TMPL=seqdb_perf -w -j --jobserver-fds=3,4 all
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/newcleanupp.cpp: In member function 'void ncbi::objects::CNewCleanup_imp::x_RemoveFlankingQuotes(std::__cxx11::string&)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/newcleanupp.cpp:7071:22: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for( ; first_pos <= last_pos ; ++first_pos, --last_pos ) {
~~~~~~~~~~^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/newcleanupp.cpp:7085:19: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if( first_pos > last_pos ) {
~~~~~~~~~~^~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/newcleanupp.cpp: In member function 'void ncbi::objects::CNewCleanup_imp::RnarefGenBC(ncbi::objects::CRNA_ref&)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/newcleanupp.cpp:8276:10: warning: unused variable 'changed' [-Wunused-variable]
bool changed = false;
^~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/newcleanupp.cpp: In member function 'void ncbi::objects::CNewCleanup_imp::RnaFeatBC(ncbi::objects::CRNA_ref&, ncbi::objects::CSeq_feat&)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/newcleanupp.cpp:9168:102: warning: enum constant in boolean context [-Wint-in-bool-context]
(rna.GetType() == CRNA_ref::eType_mRNA || rna.GetType() == CRNA_ref::eType_rRNA || CRNA_ref::eType_tRNA) &&
^~~~~~~~~~
cd objtools/blast/services/unit_test/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=blast_services_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services/unit_test'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/services/unit_test TMPL=blast_services_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/services/blast_services.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/services/unit_test/blast_services_test.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb_error.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_column.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/test'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp -o seqdb_perf.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie seqdb_perf.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqdb -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -ldl -lm -lpthread -o seqdb_perf
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_perf /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f seqdb_perf /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/seqdb_perf
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/test'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/test'
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/blastdb/Blast_filter_program_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/blastdb/Blast_filter_program.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/mask_info_registry.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/mask_info_registry.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cd objtools/seqmasks_io/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=seqmasks_io UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io TMPL=seqmasks_io -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/seqmasks_io/mask_cmdline_args.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_cmdline_args.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/taxid_set.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/taxid_set.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_bdb_reader.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_bdb_reader.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/build_db.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services/unit_test'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/services/unit_test/blast_services_test.cpp -o blast_services_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blast_services_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lblast_services -lxnetblastcli -lxnetblast -lseqdb -lblastdb -lscoremat -lxconnect -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o blast_services_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_services_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blast_services_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/blast_services_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services/unit_test'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services/unit_test'
cd algo/blast/dbindex/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=xalgoblastdbindex UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex TMPL=xalgoblastdbindex -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_fasta_reader.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbienv.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/build_db.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/sequence_istream_fasta.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_fasta_reader.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/sequence_istream_fasta.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_writer.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/dbindex/sequence_istream_bdb.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/sequence_istream_bdb.cpp:39:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_writer.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_convert.cpp -o writedb_convert.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_general.cpp -o writedb_general.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_column.cpp -o writedb_column.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/mask_info_registry.cpp -o mask_info_registry.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/taxid_set.cpp -o taxid_set.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/build_db.cpp -o build_db.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex.cpp:39:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_writer_fasta.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/typeinfo.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/multisource_util.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex.cpp:39:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex.cpp: In function 'const ncbi::blastdbindex::SIndexHeader ncbi::blastdbindex::ReadIndexHeader(void*) [with bool LEGACY = true]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex.cpp:306:19: warning: variable 'tmp' set but not used [-Wunused-but-set-variable]
unsigned long tmp;
^~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/seqmasks_io/mask_writer.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/seqmasks_io/mask_writer_int.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_writer_int.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/impl/criteria.hpp:57,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/criteria.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_cmdline_args.cpp -o mask_cmdline_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_bdb_reader.cpp -o mask_bdb_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_fasta_reader.cpp -o mask_fasta_reader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_writer.cpp -o mask_writer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_writer_fasta.cpp -o mask_writer_fasta.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_writer_int.cpp -o mask_writer_int.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/seqmasks_io/mask_writer.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/seqmasks_io/mask_writer_tab.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_writer_tab.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
IC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/multisource_util.cpp -o multisource_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/criteria.cpp -o criteria.o
/bin/rm -f libwritedb.so .libwritedb.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libwritedb.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC writedb.o writedb_impl.o writedb_volume.o writedb_files.o writedb_isam.o writedb_gimask.o writedb_convert.o writedb_general.o writedb_column.o mask_info_registry.o taxid_set.o build_db.o multisource_util.o criteria.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqdb -lxobjread -lxobjmgr -lblastdb -lseqset -lseq -lgeneral -lxser -lsequtil -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libwritedb.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libwritedb.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libwritedb.so
/bin/ln -f .writedb.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.writedb.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer'
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex_factory.cpp:40:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/seqmasks_io/mask_writer.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/seqmasks_io/mask_writer_seqloc.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_writer_seqloc.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex_search.cpp:38:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex_factory.cpp:40:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex_factory.cpp: In member function 'std::__cxx11::string ncbi::blastdbindex::CSubjectMap_Factory_Base::extractSeqVector(ncbi::blastdbindex::CSubjectMap_Factory_Base::TSeqData&)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex_factory.cpp:658:53: warning: 'std::__cxx11::string ncbi::objects::sequence::GetTitle(const ncbi::objects::CBioseq_Handle&, ncbi::objects::sequence::TGetTitleFlags)' is deprecated [-Wdeprecated-declarations]
string idstr = objects::sequence::GetTitle( bsh );
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex_factory.cpp:42:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/util/sequence.hpp:289:8: note: declared here
string GetTitle(const CBioseq_Handle& hnd, TGetTitleFlags flags = 0);
^~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/seqmasks_io/mask_writer.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/seqmasks_io/mask_writer_blastdb_maskinfo.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_writer_blastdb_maskinfo.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:69:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex_search.cpp:38:
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator {aka __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/vector.tcc: In member function 'ncbi::CConstRef<ncbi::blastdbindex::CDbIndex::CSearchResults> ncbi::blastdbindex::CSearch_Base<LEGACY, NHITS, derived_t>::operator()() [with bool LEGACY = true; long unsigned int NHITS = 0; derived_t = ncbi::blastdbindex::CSearch<true, 0>]':
/usr/include/c++/7/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/vector.tcc: In member function 'ncbi::CConstRef<ncbi::blastdbindex::CDbIndex::CSearchResults> ncbi::blastdbindex::CSearch_Base<LEGACY, NHITS, derived_t>::operator()() [with bool LEGACY = false; long unsigned int NHITS = 0; derived_t = ncbi::blastdbindex::CSearch<false, 0>]':
/usr/include/c++/7/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/vector.tcc: In member function 'ncbi::CConstRef<ncbi::blastdbindex::CDbIndex::CSearchResults> ncbi::blastdbindex::CSearch_Base<LEGACY, NHITS, derived_t>::operator()() [with bool LEGACY = true; long unsigned int NHITS = 1; derived_t = ncbi::blastdbindex::CSearch<true, 1>]':
/usr/include/c++/7/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/autogenerated_cleanup.cpp -o autogenerated_cleanup.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/autogenerated_extended_cleanup.cpp -o autogenerated_extended_cleanup.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/cleanup.cpp -o cleanup.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/cleanup_utils.cpp -o cleanup_utils.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/newcleanupp.cpp -o newcleanupp.o
/bin/rm -f libxcleanup.so .libxcleanup.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxcleanup.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC autogenerated_cleanup.o autogenerated_extended_cleanup.o cleanup.o cleanup_utils.o newcleanupp.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lxobjutil -lvalid -lsubmit -ltaxon3 -lxregexp -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lpcre
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcleanup.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxcleanup.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libxcleanup.so
/bin/ln -f .xcleanup.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.xcleanup.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup'
cd objtools/alnmgr/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=alnmgr UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr'
Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_writer_tab.cpp -o mask_writer_tab.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_writer_seqloc.cpp -o mask_writer_seqloc.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_writer_blastdb_maskinfo.cpp -o mask_writer_blastdb_maskinfo.o
/bin/rm -f libseqmasks_io.so .libseqmasks_io.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libseqmasks_io.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC mask_cmdline_args.o mask_bdb_reader.o mask_fasta_reader.o mask_writer.o mask_writer_fasta.o mask_writer_int.o mask_writer_tab.o mask_writer_seqloc.o mask_writer_blastdb_maskinfo.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqdb -lxobjread -lxobjutil -lxobjmgr -lblastdb -lseqset -lseq -lxser -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqmasks_io.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libseqmasks_io.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libseqmasks_io.so
/bin/ln -f .seqmasks_io.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.seqmasks_io.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io'
cd objtools/data_loaders/genbank/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=ncbi_xloader_genbank UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr TMPL=alnmgr -w -j --jobserver-fds=3,4 all
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank TMPL=ncbi_xloader_genbank -w -j --jobserver-fds=3,4 all
/usr/include/c++/7/bits/vector.tcc: In member function 'ncbi::CConstRef<ncbi::blastdbindex::CDbIndex::CSearchResults> ncbi::blastdbindex::CSearch_Base<LEGACY, NHITS, derived_t>::operator()() [with bool LEGACY = false; long unsigned int NHITS = 1; derived_t = ncbi::blastdbindex::CSearch<false, 1>]':
/usr/include/c++/7/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/aln_builders.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/aln_builders.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/gbloader.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/genbank/impl/gbload_util.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/gbload_util.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex'
/usr/bin/g++ -std=gnu++11 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/sequence_istream_fasta.cpp -o sequence_istream_fasta.o
/usr/bin/g++ -std=gnu++11 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/sequence_istream_bdb.cpp -o sequence_istream_bdb.o
/usr/bin/g++ -std=gnu++11 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex.cpp -o dbindex.o
/usr/bin/g++ -std=gnu++11 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex_factory.cpp -o dbindex_factory.o
/usr/bin/g++ -std=gnu++11 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex_search.cpp -o dbindex_search.o
/bin/rm -f libxalgoblastdbindex.so .libxalgoblastdbindex.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxalgoblastdbindex.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC sequence_istream_fasta.o sequence_istream_bdb.o dbindex.o dbindex_factory.o dbindex_search.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast -lseqdb -lxobjread -lxobjutil -lxobjmgr -lseqset -lseq -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgoblastdbindex.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxalgoblastdbindex.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libxalgoblastdbindex.so
/bin/ln -f .xalgoblastdbindex.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.xalgoblastdbindex.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex'
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/aln_converters.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cd objtools/blast/blastdb_format/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=blastdb_format UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format TMPL=blastdb_format -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/blastdb_seqid.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/blastdb_seqid.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:35:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:85:69: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
CSeqFormatterConfig config = CSeqFormatterConfig());
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:96:85: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
void DumpAll(CSeqDB& blastdb, CSeqFormatterConfig config = CSeqFormatterConfig());
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:128:43: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter(const CSeqFormatter& rhs);
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:130:54: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter& operator=(const CSeqFormatter& rhs);
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:130:54: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter& operator=(const CSeqFormatter& rhs);
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:85:68: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
CSeqFormatterConfig config = CSeqFormatterConfig());
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:96:84: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
void DumpAll(CSeqDB& blastdb, CSeqFormatterConfig config = CSeqFormatterConfig());
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:49:74: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
CSeqFormatterConfig config /* = CSeqFormatterConfig() */)
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:35:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:270:72: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
void CSeqFormatter::DumpAll(CSeqDB& blastdb, CSeqFormatterConfig config)
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:35:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
cd objtools/data_loaders/blastdb/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=ncbi_xloader_blastdb_rmt UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb TMPL=ncbi_xloader_blastdb_rmt -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/blastdb/bdbloader_rmt.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb/bdbloader_rmt.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/blastdb_seqid.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/blastdb_dataextract.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/blastdb_dataextract.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/aln_generators.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/gbloader.cpp -o gbloader.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/gbload_util.cpp -o gbload_util.o
/bin/rm -f libncbi_xloader_genbank.a .libncbi_xloader_genbank.a.stamp
ar cr libncbi_xloader_genbank.a gbloader.o gbload_util.o
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_genbank.a /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libncbi_xloader_genbank.a /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libncbi_xloader_genbank.a
/bin/rm -f libncbi_xloader_genbank.so .libncbi_xloader_genbank.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libncbi_xloader_genbank.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC gbloader.o gbload_util.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxconnect -lxcompress -lxser -lsequtil -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_genbank.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libncbi_xloader_genbank.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libncbi_xloader_genbank.so
/bin/ln -f .ncbi_xloader_genbank-static.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.ncbi_xloader_genbank-static.dep
/bin/ln -f .ncbi_xloader_genbank.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.ncbi_xloader_genbank.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/invalid_data_exception.hpp:31:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/blastdb_dataextract.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/aln_seqid.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/aln_seqid.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/aln_generators.cpp: In function 'void ncbi::InitSplicedsegFromPairwiseAln(ncbi::objects::CSpliced_seg&, const ncbi::CPairwiseAln&, ncbi::objects::CScope*)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/aln_generators.cpp:538:44: warning: typedef 'TAlnRngColl' locally defined but not used [-Wunused-local-typedefs]
typedef CAlignRangeCollection<TAlnRng> TAlnRngColl;
^~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/blastdb_dataextract.cpp: In member function 'std::__cxx11::string ncbi::CBlastDBExtractor::ExtractLeafTaxIds()':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/blastdb_dataextract.cpp:396:24: warning: variable 'taxids_iter' set but not used [-Wunused-but-set-variable]
set<int>::iterator taxids_iter = taxids.begin();
^~~~~~~~~~~
cd algo/blast/dbindex/makeindex/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=makeindex LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex/makeindex'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/makeindex TMPL=makeindex -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/dbindex/sequence_istream_fasta.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/makeindex/main.cpp:42:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/blastdb/blastdb_adapter.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb/remote_blastdb_adapter.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb/remote_blastdb_adapter.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/dbindex/sequence_istream_fasta.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/makeindex/main.cpp:42:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/makeindex/mkindex_app.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/makeindex/mkindex_app.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/makeindex/mkindex_app.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/makeindex/mkindex_app.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/blastdb_seqid.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/blastdb_formatter.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/blastdb_formatter.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb/bdbloader_rmt.cpp -o bdbloader_rmt.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb/remote_blastdb_adapter.cpp -o remote_blastdb_adapter.o
/bin/rm -f libncbi_xloader_blastdb_rmt.so .libncbi_xloader_blastdb_rmt.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libncbi_xloader_blastdb_rmt.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC bdbloader_rmt.o remote_blastdb_adapter.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lncbi_xloader_blastdb -lblast_services -lxobjmgr -lseq -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_blastdb_rmt.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libncbi_xloader_blastdb_rmt.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libncbi_xloader_blastdb_rmt.so
/bin/ln -f .ncbi_xloader_blastdb_rmt.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.ncbi_xloader_blastdb_rmt.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
cd objtools/simple/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=xobjsimple UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/simple TMPL=xobjsimple -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/seq_id_handle.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/simple/simple_om.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/simple/simple_om.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/invalid_data_exception.hpp:31:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/blastdb_formatter.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/pairwise_aln.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/aln_serial.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/aln_serial.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex/makeindex'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/makeindex/main.cpp -o main.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/makeindex/mkindex_app.cpp -o mkindex_app.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie main.o mkindex_app.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lxalgoblastdbindex -lblast -lcomposition_adjustment -lseqdb -lblastdb -lxobjread -lvariation -lcreaders -lsubmit -lxobjutil -ltables -lxconnect -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -ldl -lm -lpthread -o makembindex
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f makembindex /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f makembindex /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/makembindex
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex/makeindex'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex/makeindex'
cd algo/blast/unit_tests/seqdb_reader/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=seqdb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_unit_test -w -j --jobserver-fds=3,4 all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/simple/simple_om.cpp -o simple_om.o
/bin/rm -f libxobjsimple.so .libxobjsimple.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxobjsimple.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC simple_om.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lncbi_xloader_genbank -lxobjmgr -lseq -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjsimple.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxobjsimple.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libxobjsimple.so
/bin/ln -f .xobjsimple.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.xobjsimple.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple'
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbexpert.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/aln_builders.cpp -o aln_builders.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/aln_converters.cpp -o aln_converters.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/aln_generators.cpp -o aln_generators.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/aln_seqid.cpp -o aln_seqid.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/aln_serial.cpp -o aln_serial.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alndiag.cpp -o alndiag.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/align_range.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alndiag.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alndiag.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/blastdb_seqid.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_formatter.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/seq_formatter.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnmap.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmap.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/blastdb_seqid.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_formatter.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/seq_formatter.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbexpert.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmap.cpp: In member function 'ncbi::CRef<ncbi::objects::CSeq_align> ncbi::objects::CAlnMap::CreateAlignFromRange(const std::vector<int>&, ncbi::TSignedSeqPos, ncbi::TSignedSeqPos, ncbi::objects::CAlnMap::ESegmentTrimFlag)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmap.cpp:1467:35: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for (TNumrow row = 0; row < selected_rows.size(); row++) {
~~~~^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnmap.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmapprint.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp: In member function 'void seqdb::CSeqDBIsam_32bit_GI::test_method()':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp:4347:45: warning: integer overflow in expression [-Woverflow]
const Uint4 big_gi = 3L * 1024L * 1024L * 1024L; // 3 "billion"
~~~~~~~~~~~~~~~~~~~^~~~~~~
cd app/dustmasker/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=dustmasker LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/dustmasker'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/dustmasker TMPL=dustmasker -w -j --jobserver-fds=3,4 all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/seq_writer.cpp -o seq_writer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/blastdb_dataextract.cpp -o blastdb_dataextract.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/blastdb_formatter.cpp -o blastdb_formatter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/seq_formatter.cpp -o seq_formatter.o
/bin/rm -f libblastdb_format.so .libblastdb_format.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libblastdb_format.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC seq_writer.o blastdb_dataextract.o blastdb_formatter.o seq_formatter.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqdb -lxobjutil -lxobjmgr -lseq -lxser -lsequtil -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastdb_format.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libblastdb_format.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libblastdb_format.so
/bin/ln -f .blastdb_format.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.blastdb_format.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format'
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/dustmasker/dust_mask_app.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/dustmasker/main.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnseq.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnmatch.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmatch.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/dustmasker/dust_mask_app.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/dustmasker/dust_mask_app.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmatch.cpp: In static member function 'static bool ncbi::objects::CAlnMixMatches::x_CompareChainScores(const ncbi::CRef<ncbi::objects::CAlnMixMatch>&, const ncbi::CRef<ncbi::objects::CAlnMixMatch>&)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmatch.cpp:76:55: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
match1->m_ChainScore == match2->m_ChainScore &&
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
match1->m_Score > match2->m_Score ||
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmatch.cpp: In member function 'void ncbi::objects::CAlnMixMatches::Add(const ncbi::objects::CDense_seg&, ncbi::objects::CAlnMixMatches::TAddFlags)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmatch.cpp:192:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
(aln_seq1->m_StrandScore > 0 &&
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
strand1 == eNa_strand_minus ||
~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmatch.cpp:196:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
aln_seq2->m_StrandScore > 0 &&
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
strand2 == eNa_strand_minus ||
~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmatch.cpp:198:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
aln_seq2->m_StrandScore < 0 &&
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
strand2 != eNa_strand_minus)) {
~~~~~~~~~~~~~~~~~~~~~~~~~~~
cd objtools/blast/seqdb_writer/unit_test/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=writedb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/unit_test TMPL=writedb_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/dustmasker/dust_mask_app.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/dustmasker/dust_mask_app.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbexpert.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Seq_align_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Seq_align.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnmerger.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmerger.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbexpert.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/dustmasker'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/dustmasker/main.cpp -o main.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/dustmasker/dust_mask_app.cpp -o dust_mask_app.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie main.o dust_mask_app.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lxalgodustmask -lseqmasks_io -lxobjread -lvariation -lcreaders -lsubmit -lxobjutil -lseqdb -lblastdb -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -ldl -lm -lpthread -o dustmasker
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f dustmasker /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f dustmasker /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/dustmasker
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/dustmasker'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/dustmasker'
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnmerger.hpp:42:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmerger.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnsegments.hpp: In member function 'bool ncbi::objects::CAlnMixSegment::SSeqComp::operator()(const ncbi::objects::CAlnMixSeq*, const ncbi::objects::CAlnMixSeq*) const':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnsegments.hpp:102:51: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
seq1->m_SeqIdx == seq2->m_SeqIdx &&
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
seq1->m_ChildIdx < seq2->m_ChildIdx;
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmerger.cpp: In member function 'void ncbi::objects::CAlnMixMerger::x_Merge()':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmerger.cpp:140:40: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
if (m_AlnMixMatches->m_ContainsNA && m_AlnMixMatches->m_ContainsAA ||
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmerger.cpp: In member function 'void ncbi::objects::CAlnMixMerger::x_CreateDenseg()':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmerger.cpp:1210:44: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (start_its_i->second->first != -1) {
~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmerger.cpp:1232:40: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
if (m_AlnMixMatches->m_ContainsNA && m_AlnMixMatches->m_ContainsAA ||
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp: In member function 'void writedb::CSeqDBIsam_32bit_GI::test_method()':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:2815:45: warning: integer overflow in expression [-Woverflow]
const Uint4 big_gi = 3L * 1024L * 1024L * 1024L; // 3 "billion"
~~~~~~~~~~~~~~~~~~~^~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/unit_test/criteria_unit_test.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmerger.cpp: In member function 'void ncbi::objects::CAlnMixMerger::x_Merge()':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmerger.cpp:752:44: warning: 'width2' may be used uninitialized in this function [-Wmaybe-uninitialized]
while(start < start2 + len * width2) {
~~~~^~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Seq_align_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Seq_align.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnmix.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmix.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnmap.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnpos_ci.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnpos_ci.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnmerger.hpp:42:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmix.cpp:38:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnsegments.hpp: In member function 'bool ncbi::objects::CAlnMixSegment::SSeqComp::operator()(const ncbi::objects::CAlnMixSeq*, const ncbi::objects::CAlnMixSeq*) const':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnsegments.hpp:102:51: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
seq1->m_SeqIdx == seq2->m_SeqIdx &&
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
seq1->m_ChildIdx < seq2->m_ChildIdx;
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:69:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbexpert.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:35:
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long int&}; _Tp = long long int; _Alloc = std::allocator<long long int>]':
/usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector<long long int>::iterator {aka __gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:64:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbexpert.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:35:
/usr/include/c++/7/bits/stl_vector.h: In member function 'void writedb::BinaryListBuilder::test_method()':
/usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
cd algo/winmask/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=xalgowinmask UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask TMPL=xalgowinmask -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnsegments.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnsegments.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_window.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnsegments.cpp:35:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnsegments.hpp: In member function 'bool ncbi::objects::CAlnMixSegment::SSeqComp::operator()(const ncbi::objects::CAlnMixSeq*, const ncbi::objects::CAlnMixSeq*) const':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnsegments.hpp:102:51: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
seq1->m_SeqIdx == seq2->m_SeqIdx &&
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
seq1->m_ChildIdx < seq2->m_ChildIdx;
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnsegments.cpp: In member function 'void ncbi::objects::CAlnMixSegments::FillUnalignedRegions()':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnsegments.cpp:311:27: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
if (plus && prev_start_plus_len < start ||
~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker.cpp: In member function 'double ncbi::CSeqMasker::MergeAvg(std::__cxx11::list<ncbi::CSeqMasker::mitem>::iterator, const iterator&, Uint4) const':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker.cpp:404:8: note: parameter passing for argument of type 'std::__cxx11::list<ncbi::CSeqMasker::mitem>::iterator {aka std::_List_iterator<ncbi::CSeqMasker::mitem>}' changed in GCC 7.1
double CSeqMasker::MergeAvg( TMList::iterator mi,
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker.cpp: In member function 'void ncbi::CSeqMasker::Merge(ncbi::CSeqMasker::TMList&, std::__cxx11::list<ncbi::CSeqMasker::mitem>::iterator, ncbi::CSeqMasker::TMList&, std::__cxx11::list<ncbi::CSeqMasker::mitem>::iterator&) const':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker.cpp:418:6: note: parameter passing for argument of type 'std::__cxx11::list<ncbi::CSeqMasker::mitem>::iterator {aka std::_List_iterator<ncbi::CSeqMasker::mitem>}' changed in GCC 7.1
void CSeqMasker::Merge( TMList & m, TMList::iterator mi,
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker.cpp: In member function 'ncbi::CSeqMasker::TMaskList* ncbi::CSeqMasker::DoMask(const ncbi::objects::CSeqVector&, ncbi::TSeqPos, ncbi::TSeqPos) const':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker.cpp:305:22: note: parameter passing for argument of type 'std::__cxx11::list<ncbi::CSeqMasker::mitem>::iterator {aka std::_List_iterator<ncbi::CSeqMasker::mitem>}' changed in GCC 7.1
lavg = MergeAvg( k, tmp, unit_size );
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker.cpp:311:22: note: parameter passing for argument of type 'std::__cxx11::list<ncbi::CSeqMasker::mitem>::iterator {aka std::_List_iterator<ncbi::CSeqMasker::mitem>}' changed in GCC 7.1
ravg = MergeAvg( ii, j, unit_size );
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker.cpp:328:42: note: parameter passing for argument of type 'std::__cxx11::list<ncbi::CSeqMasker::mitem>::iterator {aka std::_List_iterator<ncbi::CSeqMasker::mitem>}' changed in GCC 7.1
k->avg = MergeAvg( k, --j, unit_size );
~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker.cpp:354:34: note: parameter passing for argument of type 'std::__cxx11::list<ncbi::CSeqMasker::mitem>::iterator {aka std::_List_iterator<ncbi::CSeqMasker::mitem>}' changed in GCC 7.1
k->avg = MergeAvg( k, --j, unit_size );
~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker.cpp:386:34: note: parameter passing for argument of type 'std::__cxx11::list<ncbi::CSeqMasker::mitem>::iterator {aka std::_List_iterator<ncbi::CSeqMasker::mitem>}' changed in GCC 7.1
k->avg = MergeAvg( k, j, unit_size );
~~~~~~~~^~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_window.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_score_mean.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
S=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmap.cpp -o alnmap.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmapprint.cpp -o alnmapprint.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmatch.cpp -o alnmatch.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmerger.cpp -o alnmerger.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmix.cpp -o alnmix.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnpos_ci.cpp -o alnpos_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnsegments.cpp -o alnsegments.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnmap.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnseq.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnseq.cpp:37:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnsegments.hpp: In member function 'bool ncbi::objects::CAlnMixSegment::SSeqComp::operator()(const ncbi::objects::CAlnMixSeq*, const ncbi::objects::CAlnMixSeq*) const':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnsegments.hpp:102:51: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
seq1->m_SeqIdx == seq2->m_SeqIdx &&
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
seq1->m_ChildIdx < seq2->m_ChildIdx;
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnseq.cpp: In static member function 'static bool ncbi::objects::CAlnMixSequences::x_CompareChainScores(const ncbi::CRef<ncbi::objects::CAlnMixSeq>&, const ncbi::CRef<ncbi::objects::CAlnMixSeq>&)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnseq.cpp:84:51: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
seq1->m_ChainScore == seq2->m_ChainScore &&
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
seq1->m_Score > seq2->m_Score ||
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_istat.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_score.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_score_mean_glob.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_score_mean_glob.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_window.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_score_min.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp -o seqdb_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie seqdb_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lseqdb -lwritedb -lxobjutil -lblastdb -lxobjread -lvariation -lcreaders -lsubmit -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -ldl -ldl -lm -lpthread -o seqdb_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f seqdb_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/seqdb_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader'
cd objtools/blast/blastdb_format/unit_test/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=blastdb_format_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format/unit_test'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test TMPL=blastdb_format_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnmap.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnvec.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnvec.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp -o writedb_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/unit_test/criteria_unit_test.cpp -o criteria_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie writedb_unit_test.o criteria_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lwritedb -lseqdb -lxobjread -lvariation -lcreaders -lsubmit -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -ldl -lm -lpthread -o writedb_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f writedb_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f writedb_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/writedb_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test'
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/blastdb_seqid.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_util.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_util.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/blastdb_seqid.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnvec_iterator.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_window.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_window.cpp:38:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:85:69: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
CSeqFormatterConfig config = CSeqFormatterConfig());
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:96:85: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
void DumpAll(CSeqDB& blastdb, CSeqFormatterConfig config = CSeqFormatterConfig());
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:128:43: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter(const CSeqFormatter& rhs);
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:130:54: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter& operator=(const CSeqFormatter& rhs);
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:130:54: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter& operator=(const CSeqFormatter& rhs);
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:85:68: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
CSeqFormatterConfig config = CSeqFormatterConfig());
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:96:84: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
void DumpAll(CSeqDB& blastdb, CSeqFormatterConfig config = CSeqFormatterConfig());
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:39:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestNoFormatSpecifier::test_method()':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:55:41: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
BOOST_REQUIRE_THROW(CSeqFormatter f(format_spec, db, std::cout),
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:102:9: note: in definition of macro 'BOOST_CHECK_THROW_IMPL'
S; \
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:39:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestInvalidFormatSpecifiers_Empty::test_method()':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:119:57: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
#define NcbiEmptyString NCBI_NS_NCBI::CNcbiEmptyString::Get()
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:102:9: note: in definition of macro 'BOOST_CHECK_THROW_IMPL'
S; \
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:120:19: note: in expansion of macro 'NcbiEmptyString'
#define kEmptyStr NcbiEmptyString
^~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:62:41: note: in expansion of macro 'kEmptyStr'
BOOST_REQUIRE_THROW(CSeqFormatter f(kEmptyStr, db, std::cout),
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestInvalidFormatSpecifiers_InvalidAlgoId::test_method()':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:69:25: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
CSeqFormatterConfig config;
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:39:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:71:40: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
BOOST_REQUIRE_THROW(CSeqFormatter f("%m", db, std::cout, config),
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:102:9: note: in definition of macro 'BOOST_CHECK_THROW_IMPL'
S; \
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestValidFormatSpecifiers::test_method()':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:78:25: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
CSeqFormatterConfig config;
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:94:24: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter f(*itr, db, std::cout, config);
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:98:20: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter f("%m", db, std::cout, config);
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestRequestGiOidLength::test_method()':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:109:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter f(format_spec, db, out);
^~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestRequestSeqId::test_method()':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:151:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter f(format_spec, db, out);
^~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestRequestSeqIdLong::test_method()':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:195:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter f(format_spec, db, out);
^~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestRequestAccessionPIGTaxidTitle::test_method()':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:228:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter f(format_spec, db, out);
^~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestRequestGiGivenPIG::test_method()':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:259:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter f(format_spec, db, out);
^~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestRequestSequenceDataLength::test_method()':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:284:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter f(format_spec, db, out);
^~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestMaskedFasta::test_method()':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:314:25: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
CSeqFormatterConfig config;
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:319:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter f(format_spec, db, out, config);
^~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function 'void seq_writer::TestMaskedSequenceData::test_method()':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:358:25: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations]
CSeqFormatterConfig config;
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here
struct NCBI_DEPRECATED CSeqFormatterConfig {
^~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:361:21: warning: 'CSeqFormatter' is deprecated [-Wdeprecated-declarations]
CSeqFormatter f(format_spec, db, out, config);
^~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here
class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter
^~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker.cpp -o seq_masker.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_score_mean.cpp -o seq_masker_score_mean.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_score_mean_glob.cpp -o seq_masker_score_mean_glob.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_score_min.cpp -o seq_masker_score_min.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_util.cpp -o seq_masker_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_window.cpp -o seq_masker_window.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=formatIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/blastdb_seqid.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_formatter.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_formatter_unit_test.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnmap.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnvec.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnvecprint.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_window.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_window_ambig.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_window_ambig.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnvecprint.cpp: In member function 'void ncbi::objects::CAlnVecPrinter::PopsetStyle(int, ncbi::objects::CAlnVecPrinter::EAlgorithm)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnvecprint.cpp:136:64: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
if (left_seg < 0 || seg > right_seg && right_seg > 0) {
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnvecprint.cpp: In member function 'void ncbi::objects::CAlnVecPrinter::ClustalStyle(int, ncbi::objects::CAlnVecPrinter::EAlgorithm)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnvecprint.cpp:300:64: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
if (left_seg < 0 || seg > right_seg && right_seg > 0) {
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/blastdb_seqid.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_formatter.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_formatter_unit_test.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_util.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_window_pattern.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/pairwise_aln.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/pairwise_aln.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_util.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_window_pattern_ambig.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/sparse_aln.hpp:34,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/sparse_aln.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_ostat_factory.hpp:39:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_ostat_factory.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_ostat.hpp:39:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_ostat.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format/unit_test'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp -o seq_writer_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_formatter_unit_test.cpp -o seq_formatter_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie seq_writer_unit_test.o seq_formatter_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lblastdb_format -lxobjutil -lseqdb -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -ldl -ldl -lm -lpthread -o blastdb_format_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdb_format_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blastdb_format_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/blastdb_format_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format/unit_test'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format/unit_test'
bi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnseq.cpp -o alnseq.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnvec.cpp -o alnvec.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnvec_iterator.cpp -o alnvec_iterator.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnvecprint.cpp -o alnvecprint.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/pairwise_aln.cpp -o pairwise_aln.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/sparse_aln.cpp -o sparse_aln.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbiIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/sparse_aln.hpp:34,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/sparse_aln.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_ostat_ascii.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_window_ambig.cpp -o seq_masker_window_ambig.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_window_pattern.cpp -o seq_masker_window_pattern.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_window_pattern_ambig.cpp -o seq_masker_window_pattern_ambig.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_ostat_factory.cpp -o seq_masker_ostat_factory.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_ostat.cpp -o seq_masker_ostat.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_ostat_ascii.cpp -o seq_masker_ostat_ascii.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/incluIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/sparse_aln.hpp:34,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/sparse_ci.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/sparse_ci.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/sparse_aln.cpp: In member function 'std::__cxx11::string& ncbi::CSparseAln::GetAlnSeqString(ncbi::IAlnExplorer::TNumrow, std::__cxx11::string&, const TSignedRange&, bool) const':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/sparse_aln.cpp:702:46: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (translate && aln_range.GetLength() >= trim_from + trim_to) {
~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_istat_ascii.hpp:39:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_istat_ascii.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_uset_simple.hpp:39:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_uset_simple.cpp:38:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alntext.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/score_builder_base.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/score_builder_base.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alntext.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_istat_factory.hpp:39:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_istat_factory.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_ostat.hpp:39:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_ostat_bin.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_ostat_bin.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/score_builder_base.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/score_builder_base.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_uset_array.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_uset_array.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_istat_bin.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
de /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_istat_ascii.cpp -o seq_masker_istat_ascii.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_uset_simple.cpp -o seq_masker_uset_simple.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_istat_factory.cpp -o seq_masker_istat_factory.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_ostat_bin.cpp -o seq_masker_ostat_bin.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_uset_array.cpp -o seq_masker_uset_array.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_istat_bin.cpp -o seq_masker_istat_bin.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_ostat_opt.cpp -o seq_masker_ostat_opt.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_ostat_opt.cpp:38:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_ostat.hpp:39:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_ostat_opt.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_ostat_opt_ascii.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_ostat_opt_ascii.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_uset_hash.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_uset_hash.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_istat_oascii.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_istat_oascii.cpp:38:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-blast+-2.7.1/c++/src/objtools/alnmgr/sparse_ci.cpp -o sparse_ci.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alntext.cpp -o alntext.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/score_builder_base.cpp -o score_builder_base.o
/bin/rm -f libxalnmgr.so .libxalnmgr.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxalnmgr.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC aln_builders.o aln_converters.o aln_generators.o aln_seqid.o aln_serial.o alndiag.o alnmap.o alnmapprint.o alnmatch.o alnmerger.o alnmix.o alnpos_ci.o alnsegments.o alnseq.o alnvec.o alnvec_iterator.o alnvecprint.o pairwise_aln.o sparse_aln.o sparse_ci.o alntext.o score_builder_base.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lxobjutil -lxobjmgr -lseqset -lseq -lxser -ltables -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalnmgr.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxalnmgr.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libxalnmgr.so
/bin/ln -f .xalnmgr.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.xalnmgr.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr'
cd objtools/align_format/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=align_format UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/align_format TMPL=align_format -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_ostat.hpp:39:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_ostat_opt.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_ostat_opt_bin.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_ostat_opt_bin.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/align_format/format_flags.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/align_format/format_flags.cpp:30:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_istat_obinary.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_istat_obinary.cpp:38:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_istat_oascii.cpp: In constructor 'ncbi::CSeqMaskerIstatOAscii::CSeqMaskerIstatOAscii(const string&, Uint4, Uint4, Uint4, Uint4, Uint4, Uint4, Uint4)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_istat_oascii.cpp:113:60: warning: 'unit_size' may be used uninitialized in this function [-Wmaybe-uninitialized]
if( k == 0U || k > (Uint4)(2*unit_size - 1) )
~~~~~~~~~~~~~^~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_cache_boost.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_cache_boost.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_ostat_opt_ascii.cpp -o seq_masker_ostat_opt_ascii.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_uset_hash.cpp -o seq_masker_uset_hash.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_istat_oascii.cpp -o seq_masker_istat_oascii.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_ostat_opt_bin.cpp -o seq_masker_ostat_opt_bin.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_istat_obinary.cpp -o seq_masker_istat_obinary.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_cache_boost.cpp -o seq_masker_cache_boost.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/align_format/align_format_util.hpp:32,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/align_format/align_format_util.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_util.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_counts_converter.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cd objtools/format/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=xformat UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format TMPL=xformat -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_dup_table.cpp:40:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/accession_item.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_dup_table.cpp:40:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/accession_item.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/align_format/showdefline.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/align_format/showdefline.cpp:33:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_gen_counts.cpp:39:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/basecount_item.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_gen_counts.cpp:39:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/comment_item.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:69:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/align_format/align_format_util.hpp:32,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/align_format/align_format_util.cpp:36:
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ncbi::align_format::CAlignFormatUtil::SDbInfo&}; _Tp = ncbi::align_format::CAlignFormatUtil::SDbInfo; _Alloc = std::allocator<ncbi::align_format::CAlignFormatUtil::SDbInfo>]':
/usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector<ncbi::align_format::CAlignFormatUtil::SDbInfo>::iterator {aka __gnu_cxx::__normal_iterator<ncbi::align_format::CAlignFormatUtil::SDbInfo*, std::vector<ncbi::align_format::CAlignFormatUtil::SDbInfo> >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:64:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/align_format/align_format_util.hpp:32,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/align_format/align_format_util.cpp:36:
/usr/include/c++/7/bits/stl_vector.h: In static member function 'static void ncbi::align_format::CAlignFormatUtil::FillScanModeBlastDbInfo(std::vector<ncbi::align_format::CAlignFormatUtil::SDbInfo>&, bool, int, Int8, std::__cxx11::string&)':
/usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::align_format::CAlignFormatUtil::SDbInfo*, std::vector<ncbi::align_format::CAlignFormatUtil::SDbInfo> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/comment_item.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/usr/include/c++/7/bits/stl_vector.h: In static member function 'static void ncbi::align_format::CAlignFormatUtil::GetBlastDbInfo(std::vector<ncbi::align_format::CAlignFormatUtil::SDbInfo>&, const string&, bool, int, bool)':
/usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::align_format::CAlignFormatUtil::SDbInfo*, std::vector<ncbi::align_format::CAlignFormatUtil::SDbInfo> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::align_format::CAlignFormatUtil::SDbInfo*, std::vector<ncbi::align_format::CAlignFormatUtil::SDbInfo> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/util/sequence.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_util.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/comment_item.cpp: In function 'void ncbi::objects::s_GetAssemblyInfo(const ncbi::objects::CBioseqContext&, std::__cxx11::string&, const ncbi::objects::CUser_object&)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/comment_item.cpp:367:16: warning: unused variable 'is_html' [-Wunused-variable]
const bool is_html = ctx.Config().DoHTML();
^~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/winmask/win_mask_config.hpp:41:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_config.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/util/sequence.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_util.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_util.cpp: In member function 'virtual bool ncbi::CWinMaskUtil::CIdSet_TextMatch::find(const ncbi::objects::CBioseq_Handle&) const':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_util.cpp:130:45: warning: 'std::__cxx11::string ncbi::objects::sequence::GetTitle(const ncbi::objects::CBioseq_Handle&, ncbi::objects::sequence::TGetTitleFlags)' is deprecated [-Wdeprecated-declarations]
string id_str = sequence::GetTitle( bsh );
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_util.cpp:37:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/util/sequence.hpp:289:8: note: declared here
string GetTitle(const CBioseq_Handle& hnd, TGetTitleFlags flags = 0);
^~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/winmask/win_mask_config.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_config.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_config.cpp: In static member function 'static void ncbi::CWinMaskConfig::AddWinMaskArgs(ncbi::CArgDescriptions&, ncbi::CWinMaskConfig::EAppType, bool)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_config.cpp:181:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
if(type == eAny || type >= eGenerateMasksWithDuster)
^~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_config.cpp:185:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
arg_desc.AddDefaultKey( "dust_level", "dust_level",
^~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/align_format/align_format_util.hpp:32,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/align_format/showalign.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/align_format/tabular.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/contig_item.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/align_format/align_format_util.hpp:32,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/align_format/showalign.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/align_format/tabular.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/winmask/seq_masker_istat.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_istat.cpp:32:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/align_format/showalign.cpp: In function 'void ncbi::align_format::s_MakeDomainString(int, int, const string&, std::__cxx11::string&)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/align_format/showalign.cpp:4355:49: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for (int i = actual_first_pos, j = 0; i < domain_string.size() - 1 && j < domain_name.size(); i ++, j ++){
~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/align_format/showalign.cpp:4355:81: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for (int i = actual_first_pos, j = 0; i < domain_string.size() - 1 && j < domain_name.size(); i ++, j ++){
~~^~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/date_item.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_counts_converter.cpp -o win_mask_counts_converter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_dup_table.cpp -o win_mask_dup_table.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_gen_counts.cpp -o win_mask_gen_counts.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_util.cpp -o win_mask_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_config.cpp -o win_mask_config.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_istat.cpp -o seq_masker_istat.o
/bin/rm -f libxalgowinmask.so .libxalgowinmask.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxalgowinmask.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC seq_masker.o seq_masker_score_mean.o seq_masker_score_mean_glob.o seq_masker_score_min.o seq_masker_util.o seq_masker_window.o seq_masker_window_ambig.o seq_masker_window_pattern.o seq_masker_window_pattern_ambig.o seq_masker_ostat_factory.o seq_masker_ostat.o seq_masker_ostat_ascii.o seq_masker_istat_ascii.o seq_masker_uset_simple.o seq_masker_istat_factory.o seq_masker_ostat_bin.o seq_masker_uset_array.o seq_masker_istat_bin.o seq_masker_ostat_opt.o seq_masker_ostat_opt_ascii.o seq_masker_uset_hash.o seq_masker_istat_oascii.o seq_masker_ostat_opt_bin.o seq_masker_istat_obinary.o seq_masker_cache_boost.o win_mask_counts_converter.o win_mask_dup_table.o win_mask_gen_counts.o win_mask_util.o win_mask_config.o seq_masker_istat.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqmasks_io -lxobjread -lxobjutil -lxobjmgr -lseq -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgowinmask.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxalgowinmask.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libxalgowinmask.so
/bin/ln -f .xalgowinmask.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.xalgowinmask.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask'
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/html/html.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/align_format/vectorscreen.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/align_format/vectorscreen.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/dbsource_item.cpp:32:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/dbsource_item.cpp:32:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/accession_item.cpp -o accession_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/basecount_item.cpp -o basecount_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/comment_item.cpp -o comment_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/contig_item.cpp -o contig_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/date_item.cpp -o date_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/dbsource_item.cpp -o dbsource_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/defline_item.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/align_format/format_flags.cpp -o format_flags.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/align_format/align_format_util.cpp -o align_format_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/align_format/showdefline.cpp -o showdefline.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/align_format/showalign.cpp -o showalign.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/align_format/tabular.cpp -o tabular.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/align_format/vectorscreen.cpp -o vectorscreen.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/defline_item.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_loc_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_loc.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/align_format/seqalignfilter.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/align_format/seqalignfilter.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/feature_item.cpp:44:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/taxon1/Taxon1_data_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/taxon1/Taxon1_data.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/taxon1/taxon1__.hpp:1,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/taxon1/taxon1.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/align_format/taxFormat.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/taxon1/Taxon1_data_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/taxon1/Taxon1_data.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/taxon1/taxon1__.hpp:1,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/taxon1/taxon1.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/align_format/taxFormat.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
cd algo/blast/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=xblast UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api TMPL=xblast -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/feature_item.cpp:44:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_aux.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/feature_item.cpp: In function 'const string& ncbi::objects::s_AaName(int)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/feature_item.cpp:1815:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if ( idx > 0 && idx < ArraySize(s_TrnaList) ) {
~~~~^~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/feature_item.cpp: In static member function 'static std::__cxx11::string ncbi::objects::CFeatureItem::x_SeqIdWriteForTable(const ncbi::objects::CBioseq&, bool, bool)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/feature_item.cpp:5031:20: warning: variable 'patent' set but not used [-Wunused-but-set-variable]
const CSeq_id* patent = NULL;
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/feature_item.cpp:5032:20: warning: variable 'pdb' set but not used [-Wunused-but-set-variable]
const CSeq_id* pdb = NULL;
^~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_aux.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_cxx.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_cxx.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/genome_item.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/bioseq_handle.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/align_format/aln_printer.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Na_strand_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Na_strand.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_local_priv.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_local_priv.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/bioseq_handle.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/align_format/aln_printer.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/remote_blast.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_builder.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_local_priv.cpp: In member function 'bool ncbi::blast::CBlastOptionsLocal::Validate() const':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_local_priv.cpp:387:5: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
else
^~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_local_priv.cpp:396:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'else'
return true;
^~~~~~
build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/align_format/seqalignfilter.cpp -o seqalignfilter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/align_format/taxFormat.cpp -o taxFormat.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/align_format/aln_printer.cpp -o aln_printer.o
/bin/rm -f libalign_format.so .libalign_format.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libalign_format.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC format_flags.o align_format_util.o showdefline.o showalign.o tabular.o vectorscreen.o seqalignfilter.o taxFormat.o aln_printer.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lxalnmgr -lncbi_xloader_genbank -lseqdb -lblast_services -lxobjread -lxobjutil -lxobjmgr -lxnetblast -lblastdb -lgene_info -ltaxon1 -lseqset -lseq -lgeneral -lxser -lxcgi -lxhtml -ltables -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libalign_format.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libalign_format.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libalign_format.so
/bin/ln -f .align_format.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.align_format.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format'
cd app/winmasker/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=winmasker LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/winmasker TMPL=winmasker -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/ctrl_items.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/keywords_item.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/ctrl_items.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/keywords_item.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/winmasker/win_mask_app.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/winmasker/main.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/util_misc.hpp:33,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup_cxx.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/winmasker/win_mask_app.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/winmasker/win_mask_app.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/util_misc.hpp:33,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup_cxx.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup_cxx.cpp:1193:34: note: in expansion of macro 'THROWS'
THROWS((CBlastException))
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup_cxx.cpp:1241:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException))
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/dustmask/symdust.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/locus_item.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/locus_item.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
cd objtools/align_format/unit_test/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=align_format_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format/unit_test'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test TMPL=align_format_unit_test -w -j --jobserver-fds=3,4 all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/winmasker/main.cpp -o main.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/winmasker/win_mask_app.cpp -o win_mask_app.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/winmasker/win_mask_sdust_masker.cpp -o win_mask_sdust_masker.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie main.o win_mask_app.o win_mask_sdust_masker.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lxalgowinmask -lxalgodustmask -lblast -lcomposition_adjustment -lseqmasks_io -lseqdb -lblastdb -ltables -lxobjread -lvariation -lcreaders -lsubmit -lxobjutil -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -ldl -lm -lpthread -o windowmasker
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f windowmasker /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f windowmasker /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/windowmasker
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/showdefline_unit_test.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/showalign_unit_test.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_seqalign.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_seqalign.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/showdefline_unit_test.cpp:34:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/primary_item.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/primary_item.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/primary_item.cpp: In member function 'void ncbi::objects::CPrimaryItem::x_GetStrForPrimary(ncbi::objects::CBioseqContext&)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/primary_item.cpp:213:63: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if ( ctx.IsRefSeq() && last_stop > -1 && (this_start > (last_stop + 1)) ) {
~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/primary_item.cpp:214:28: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (this_start < (15 + last_stop) ) {
~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_aux.cpp -o blast_aux.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_cxx.cpp -o blast_options_cxx.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_local_priv.cpp -o blast_options_local_priv.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_builder.cpp -o blast_options_builder.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup_cxx.cpp -o blast_setup_cxx.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_seqalign.cpp -o blast_seqalign.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blasILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/defline_item.cpp -o defline_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/feature_item.cpp -o feature_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/genome_item.cpp -o genome_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/ctrl_items.cpp -o ctrl_items.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/keywords_item.cpp -o keywords_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/locus_item.cpp -o locus_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/primary_item.cpp -o primary_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_handle.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/reference_item.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/blast_test_util.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/blast_test_util.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_handle.cpp: In member function 'char* ncbi::blast::CBlastOptionsHandle::GetFilterString() const':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_handle.cpp:100:36: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations]
return m_Opts->GetFilterString(); /* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_handle.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:171:27: note: declared here
NCBI_DEPRECATED char* GetFilterString() const;
^~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_handle.cpp: In member function 'void ncbi::blast::CBlastOptionsHandle::SetFilterString(const char*, bool)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_handle.cpp:106:37: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
m_Opts->SetFilterString(f, clear); /* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_handle.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/vectorscreen_unit_test.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/reference_item.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_nucl_options.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_nucl_options.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/vectorscreen_unit_test.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_nucl_options.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_nucl_options.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_nucl_options.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/disc_nucl_options.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/disc_nucl_options.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/tabularinof_unit_test.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_prot_options.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_nucl_options.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/disc_nucl_options.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/disc_nucl_options.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/segment_item.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_prot_options.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/tabularinof_unit_test.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/sequence_item.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_advprot_options.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/psiblast_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_options.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/sequence_item.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_rps_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_rps_options.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_advprot_options.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/psiblast_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_options.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_rps_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_rps_options.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
t+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_handle.cpp -o blast_options_handle.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_nucl_options.cpp -o blast_nucl_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/disc_nucl_options.cpp -o disc_nucl_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_prot_options.cpp -o blast_prot_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_options.cpp -o psiblast_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_rps_options.cpp -o blast_rps_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/source_item.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/version_item.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/source_item.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blastx_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blastx_options.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/source_item.cpp: In member function 'void ncbi::objects::CSourceItem::x_SetSource(const ncbi::objects::CBioSource&, const ncbi::CSerialObject&)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/source_item.cpp:325:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if ( genome >= s_organelle_prefix_size ) {
~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/aln_printer_unit_test.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/tblastx_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/tblastx_options.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/wgs_item.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/aln_printer_unit_test.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/tblastx_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/tblastx_options.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_advprot_options.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/tblastn_options.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/tblastn_options.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/reference_item.cpp -o reference_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/segment_item.cpp -o segment_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/sequence_item.cpp -o sequence_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/source_item.cpp -o source_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/version_item.cpp -o version_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/wgs_item.cpp -o wgs_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-bIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_advprot_options.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/tblastn_options.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/tblastn_options.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/tsa_item.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/general/Int_fuzz_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/general/Int_fuzz.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_seqloc.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_rps_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/rpstblastn_options.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/rpstblastn_options.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/general/Int_fuzz_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/general/Int_fuzz.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_seqloc.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_rps_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/rpstblastn_options.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/rpstblastn_options.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_nucl_options.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/phiblast_nucl_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/phiblast_nucl_options.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format/unit_test'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/showdefline_unit_test.cpp -o showdefline_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/showalign_unit_test.cpp -o showalign_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/blast_test_util.cpp -o blast_test_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/vectorscreen_unit_test.cpp -o vectorscreen_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/tabularinof_unit_test.cpp -o tabularinof_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/aln_printer_unit_test.cpp -o aln_printer_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie showdefline_unit_test.o showalign_unit_test.o blast_test_util.o vectorscreen_unit_test.o tabularinof_unit_test.o aln_printer_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxalnmgr -lxcgi -lxhtml -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -ldl -lm -lpthread -o align_format_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f align_format_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f align_format_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/align_format_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format/unit_test'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format/unit_test'
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_nucl_options.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/phiblast_nucl_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/phiblast_nucl_options.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/qualifiers.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/context.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/qualifiers.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/gather_items.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/context.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/phiblast_prot_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/phiblast_prot_options.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/qualifiers.cpp: In member function 'virtual void ncbi::objects::CFlatSeqIdQVal::Format(ncbi::objects::TFlatQuals&, const ncbi::CTempString&, ncbi::objects::CBioseqContext&, ncbi::objects::IFlatQVal::TFlags) const':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/qualifiers.cpp:1050:10: warning: unused variable 'bHtml' [-Wunused-variable]
bool bHtml = ctx.Config().DoHTML();
^~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/gather_items.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/phiblast_prot_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/phiblast_prot_options.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
ITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blastx_options.cpp -o blastx_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/tblastx_options.cpp -o tblastx_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/tblastn_options.cpp -o tblastn_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/rpstblastn_options.cpp -o rpstblastn_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/phiblast_nucl_options.cpp -o phiblast_nucl_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/phiblast_prot_options.cpp -o phiblast_prot_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/incl/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/gather_items.cpp: In member function 'void ncbi::objects::CFlatGatherer::x_IdComments(ncbi::objects::CBioseqContext&, ncbi::objects::CFlatGatherer::EGenomeAnnotComment) const':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/gather_items.cpp:1029:34: warning: unused variable 'format' [-Wunused-variable]
CCommentItem::ECommentFormat format = ctx.Config().DoHTML() ?
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/gather_items.cpp: In member function 'void ncbi::objects::CFlatGatherer::x_CollectBioSources(ncbi::objects::CFlatGatherer::TSourceFeatSet&) const':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/gather_items.cpp:1798:13: warning: unused variable 'scope' [-Wunused-variable]
CScope* scope = &ctx.GetScope();
^~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/pssm_engine.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/gather_items.cpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/gather_items.cpp:759:13: warning: 'bool ncbi::objects::s_NsAreGaps(const ncbi::objects::CBioseq_Handle&, ncbi::objects::CBioseqContext&)' defined but not used [-Wunused-function]
static bool s_NsAreGaps(const CBioseq_Handle& seq, CBioseqContext& ctx)
^~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/pssm_engine.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/prelim_stage.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/local_blast.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/local_blast.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/embl_gather.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/embl_gather.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/remote_blast.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/util/sequence.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqinfosrc_seqvec.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqinfosrc_seqdb.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/util/sequence.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqinfosrc_seqvec.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/genbank_gather.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/genbank_gather.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /usr/include/c++/7/list:64:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_stack.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/remote_blast.cpp:35:
/usr/include/c++/7/bits/list.tcc: In member function 'void std::__cxx11::list<_Tp, _Alloc>::_M_assign_dispatch(_InputIterator, _InputIterator, std::__false_type) [with _InputIterator = std::_List_const_iterator<long long int>; _Tp = long long int; _Alloc = std::allocator<long long int>]':
/usr/include/c++/7/bits/list.tcc:307:7: note: parameter passing for argument of type 'std::_List_const_iterator<long long int>' changed in GCC 7.1
list<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/list.tcc:307:7: note: parameter passing for argument of type 'std::_List_const_iterator<long long int>' changed in GCC 7.1
/usr/include/c++/7/bits/list.tcc: In member function 'void ncbi::blast::CRemoteBlast::x_SetOneParam(ncbi::objects::CBlast4Field&, const std::__cxx11::list<long long int>*)':
/usr/include/c++/7/bits/list.tcc:285:22: note: parameter passing for argument of type 'std::_List_const_iterator<long long int>' changed in GCC 7.1
_M_assign_dispatch(__x.begin(), __x.end(), __false_type());
~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
last+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/tsa_item.cpp -o tsa_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_seqloc.cpp -o flat_seqloc.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/qualifiers.cpp -o qualifiers.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/context.cpp -o context.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/gather_items.cpp -o gather_items.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/embl_gather.cpp -o embl_gather.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/genbank_gather.cpp -o genbank_gather.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_file_generator.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/item_formatter.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_file_generator.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/item_formatter.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_file_generator.cpp: In member function 'void ncbi::objects::CFlatFileGenerator::Generate(const ncbi::objects::CSeq_entry_Handle&, ncbi::objects::CFlatItemOStream&)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_file_generator.cpp:258:10: warning: unused variable 'nearFeatsSuppress' [-Wunused-variable]
bool nearFeatsSuppress = false;
^~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_file_generator.cpp:261:10: warning: variable 'isNgNtNwNz' set but not used [-Wunused-but-set-variable]
bool isNgNtNwNz = false;
^~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_file_generator.cpp:262:10: warning: variable 'isGED' set but not used [-Wunused-but-set-variable]
bool isGED = false;
^~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_file_generator.cpp:263:10: warning: variable 'isTPA' set but not used [-Wunused-but-set-variable]
bool isTPA = false;
^~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_seqinfosrc.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqinfosrc_bioseq.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqinfosrc_bioseq.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/embl_formatter.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_seqinfosrc.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqinfosrc_bioseq.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqinfosrc_bioseq.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqsrc_multiseq.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ude /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/pssm_engine.cpp -o pssm_engine.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/local_blast.cpp -o local_blast.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/remote_blast.cpp -o remote_blast.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqinfosrc_seqvec.cpp -o seqinfosrc_seqvec.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqinfosrc_seqdb.cpp -o seqinfosrc_seqdb.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqinfosrc_bioseq.cpp -o seqinfosrc_bioseq.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqsrc_multiseq.cpp -o seqsrc_multiseq.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqsrc_seqdb.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqsrc_query_factory.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqsrc_query_factory.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/genbank_formatter.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqsrc_multiseq.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqsrc_query_factory.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqsrc_query_factory.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqsrc_seqdb.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/genbank_formatter.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/format_item_ostream.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/item_ostream.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_types.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/bl2seq.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/bioseq_handle.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/seq_vector.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_objmgr_tools.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
GEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_file_generator.cpp -o flat_file_generator.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/item_formatter.cpp -o item_formatter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/embl_formatter.cpp -o embl_formatter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/genbank_formatter.cpp -o genbank_formatter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/format_item_ostream.cpp -o format_item_ostream.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/item_ostream.cpp -o item_ostream.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/ostream_text_ostream.cpp -o ostreamIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/ostream_text_ostream.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/bioseq_handle.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/seq_vector.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_objmgr_tools.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_types.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/bl2seq.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/origin_item.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/repeats_filter_cxx.cpp:39:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/ftable_gather.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/ftable_gather.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_mtlock.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqsrc_seqdb.cpp -o seqsrc_seqdb.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqsrc_query_factory.cpp -o seqsrc_query_factory.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/bl2seq.cpp -o bl2seq.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_objmgr_tools.cpp -o blast_objmgr_tools.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/repeats_filter_cxx.cpp -o repeats_filter_cxx.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_mtlock.cpp -o blast_mtlock.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/repeats_filter_cxx.cpp:39:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/ftable_formatter.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_types.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/uniform_search.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/psibl2seq.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psibl2seq.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/ftable_formatter.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_types.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/uniform_search.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/local_db_adapter.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/local_db_adapter.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/gbseq_formatter.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_types.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/uniform_search.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/local_db_adapter.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/local_db_adapter.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/psiblast.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/format/flat_file_config.hpp:34,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_file_config.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/format/flat_file_config.hpp:34,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_file_config.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/gbseq_formatter.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/psiblast.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_impl.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_impl.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_iteration.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
_text_ostream.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/origin_item.cpp -o origin_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/ftable_gather.cpp -o ftable_gather.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/ftable_formatter.cpp -o ftable_formatter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/gbseq_formatter.cpp -o gbseq_formatter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_file_config.cpp -o flat_file_config.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/alignment_item.cpp -o alignment_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/alignment_item.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/psi_pssm_input.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psi_pssm_input.cpp:38:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/gap_item.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psibl2seq.cpp -o psibl2seq.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/local_db_adapter.cpp -o local_db_adapter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast.cpp -o psiblast.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_impl.cpp -o psiblast_impl.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_iteration.cpp -o psiblast_iteration.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psi_pssm_input.cpp -o psi_pssm_input.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/msa_pssm_input.cpp -o msa_pssm_input.o
/usIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/msa_pssm_input.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/msa_pssm_input.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_aux_priv.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_aux_priv.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/msa_pssm_input.cpp: In member function 'void ncbi::blast::CPsiBlastInputClustalW::x_ExtractAlignmentData()':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/msa_pssm_input.cpp:376:22: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
while (k < m_Msa->dimensions->query_length &&
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/genome_project_item.cpp:33:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnmap.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/format/cigar_formatter.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/sam_formatter.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/list:64:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_stack.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_aux_priv.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_aux_priv.cpp:34:
/usr/include/c++/7/bits/list.tcc: In member function 'std::__cxx11::list<_Tp, _Alloc>::iterator std::__cxx11::list<_Tp, _Alloc>::insert(std::__cxx11::list<_Tp, _Alloc>::const_iterator, std::__cxx11::list<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/7/bits/list.tcc:116:5: note: parameter passing for argument of type 'std::__cxx11::list<double>::const_iterator {aka std::_List_const_iterator<double>}' changed in GCC 7.1
list<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnmap.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/format/cigar_formatter.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/sam_formatter.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /usr/include/c++/7/vector:69:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_aux_priv.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_aux_priv.cpp:34:
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/7/bits/vector.tcc:458:5: note: parameter passing for argument of type 'std::vector<double>::iterator {aka __gnu_cxx::__normal_iterator<double*, std::vector<double> >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:64:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_aux_priv.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_aux_priv.cpp:34:
/usr/include/c++/7/bits/stl_vector.h: In static member function 'static ncbi::CNcbiMatrix<double>* ncbi::blast::CScorematPssmConverter::GetWeightedResidueFrequencies(const ncbi::objects::CPssmWithParameters&)':
/usr/include/c++/7/bits/stl_vector.h:712:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
_M_fill_insert(end(), __new_size - size(), __x);
~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_vector.h: In static member function 'static ncbi::CNcbiMatrix<double>* ncbi::blast::CScorematPssmConverter::GetFreqRatios(const ncbi::objects::CPssmWithParameters&)':
/usr/include/c++/7/bits/stl_vector.h:712:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
_M_fill_insert(end(), __new_size - size(), __x);
~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:69:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_aux_priv.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_aux_priv.cpp:34:
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector<double>::iterator {aka __gnu_cxx::__normal_iterator<double*, std::vector<double> >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:64:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_aux_priv.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_aux_priv.cpp:34:
/usr/include/c++/7/bits/stl_vector.h: In static member function 'static void ncbi::blast::CScorematPssmConverter::GetSigma(const ncbi::objects::CPssmWithParameters&, std::vector<double>&)':
/usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/7/bits/stl_vector.h: In static member function 'static void ncbi::blast::CScorematPssmConverter::GetInformationContent(const ncbi::objects::CPssmWithParameters&, std::vector<double>&)':
/usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/7/bits/stl_vector.h: In static member function 'static void ncbi::blast::CScorematPssmConverter::GetGaplessColumnWeights(const ncbi::objects::CPssmWithParameters&, std::vector<double>&)':
/usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/7/list:64:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_stack.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_aux_priv.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_aux_priv.cpp:34:
/usr/include/c++/7/bits/list.tcc: In function 'void ncbi::blast::PsiBlastComputePssmScores(ncbi::CRef<ncbi::objects::CPssmWithParameters>, const ncbi::blast::CBlastOptions&)':
/usr/include/c++/7/bits/list.tcc:246:15: note: parameter passing for argument of type 'std::__cxx11::list<double>::const_iterator {aka std::_List_const_iterator<double>}' changed in GCC 7.1
insert(end(), __new_size, __x);
~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_aux_priv.cpp:459:31: note: parameter passing for argument of type 'std::__cxx11::list<double>::const_iterator {aka std::_List_const_iterator<double>}' changed in GCC 7.1
freq_ratios.insert(itr, diff, 0.0);
~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/cigar_formatter.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_aux_priv.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_aux_priv.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/cigar_formatter.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_advprot_options.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_advprot_options.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_advprot_options.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blastp_kmer_options.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blastp_kmer_options.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_advprot_options.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blastp_kmer_options.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blastp_kmer_options.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/format/gather_iter.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/gather_iter.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/format/items/item_base.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/format/items/html_anchor_item.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/html_anchor_item.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/format/gather_iter.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/gather_iter.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/inst_info_map.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/inst_info_map.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/version.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/version.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/version.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/gap_item.cpp -o gap_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/genome_project_item.cpp -o genome_project_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/sam_formatter.cpp -o sam_formatter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/cigar_formatter.cpp -o cigar_formatter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/gather_iter.cpp -o gather_iter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/html_anchor_item.cpp -o html_anchor_item.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/inst_info_map.cpp -o inst_info_map.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_loc_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_loc.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/dust_filter.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/dust_filter.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/scope.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/format/items/gene_finder.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/gene_finder.cpp:38:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
r/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_aux_priv.cpp -o psiblast_aux_priv.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_aux_priv.cpp -o blast_aux_priv.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_advprot_options.cpp -o blast_advprot_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blastp_kmer_options.cpp -o blastp_kmer_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/version.cpp -o version.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/dust_filter.cpp -o dust_filter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-securitIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_loc_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_loc.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/dust_filter.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/dust_filter.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/scope.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/format/items/gene_finder.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/gene_finder.cpp:38:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/format/items/flat_qual_slots.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_qual_slots.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/rps_aux.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/format/items/flat_qual_slots.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_qual_slots.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/search_strategy.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:69:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/rps_aux.cpp:35:
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector<double>::iterator {aka __gnu_cxx::__normal_iterator<double*, std::vector<double> >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:64:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/rps_aux.cpp:35:
/usr/include/c++/7/bits/stl_vector.h: In member function 'ncbi::CRef<ncbi::blast::CBlastRPSAuxInfo> ncbi::blast::CRpsAuxFile::x_ReadFromFile(ncbi::CNcbiIfstream&)':
/usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/setup_factory.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/prelim_stage.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/prelim_stage.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/setup_factory.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
bi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/gene_finder.cpp -o gene_finder.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_qual_slots.cpp -o flat_qual_slots.o
/bin/rm -f libxformat.so .libxformat.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxformat.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC accession_item.o basecount_item.o comment_item.o contig_item.o date_item.o dbsource_item.o defline_item.o feature_item.o genome_item.o ctrl_items.o keywords_item.o locus_item.o primary_item.o reference_item.o segment_item.o sequence_item.o source_item.o version_item.o wgs_item.o tsa_item.o flat_seqloc.o qualifiers.o context.o gather_items.o embl_gather.o genbank_gather.o flat_file_generator.o item_formatter.o embl_formatter.o genbank_formatter.o format_item_ostream.o item_ostream.o ostream_text_ostream.o origin_item.o ftable_gather.o ftable_formatter.o gbseq_formatter.o flat_file_config.o alignment_item.o gap_item.o genome_project_item.o sam_formatter.o cigar_formatter.o gather_iter.o html_anchor_item.o inst_info_map.o gene_finder.o flat_qual_slots.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lxcleanup -lvalid -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lsubmit -lxalnmgr -lxobjutil -ltaxon3 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxformat.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxformat.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libxformat.so
/bin/ln -f .xformat.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.xformat.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format'
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/traceback_stage.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/traceback_stage.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
y -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/rps_aux.cpp -o rps_aux.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/search_strategy.cpp -o search_strategy.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/setup_factory.cpp -o setup_factory.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/prelim_stage.cpp -o prelim_stage.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/traceback_stage.cpp -o traceback_stage.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/uniform_search.cpp -o uniform_search.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-bIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_types.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/uniform_search.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/uniform_search.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/Pssm_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/Pssm.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/local_search.cpp:38:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_results.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_results.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_diag_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_diag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqalign/seqalign__.hpp:1,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/remote_search.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/query_data.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/objmgr_query_data.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/objmgr_query_data.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/objmgr_query_data.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/objmgr_query_data.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/objmgrfree_query_data.cpp:38:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/bioseq_extract_data_priv.cpp:38:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
last+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/local_search.cpp -o local_search.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_results.cpp -o blast_results.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/remote_search.cpp -o remote_search.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/query_data.cpp -o query_data.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/objmgr_query_data.cpp -o objmgr_query_data.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/objmgrfree_query_data.cpp -o objmgrfree_query_data.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/bioseq_extract_data_priv.cpp -o bioseq_extract_data_priv.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-mIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/objmgrfree_query_data.cpp:38:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/effsearchspace_calc.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/effsearchspace_calc.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/bioseq_extract_data_priv.cpp:38:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_seqinfosrc_aux.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_seqinfosrc_aux.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_dbindex.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/split_query.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/split_query_cxx.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/effsearchspace_calc.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/split_query_aux_priv.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/effsearchspace_calc.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/split_query_aux_priv.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/split_query.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/split_query_cxx.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/split_query_blk.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/split_query_blk.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
ap=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/effsearchspace_calc.cpp -o effsearchspace_calc.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_seqinfosrc_aux.cpp -o blast_seqinfosrc_aux.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_dbindex.cpp -o blast_dbindex.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/split_query_cxx.cpp -o split_query_cxx.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/split_query_aux_priv.cpp -o split_query_aux_priv.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/split_query_blk.cpp -o split_query_blk.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FIIn file included from /usr/include/c++/7/vector:69:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/effsearchspace_calc.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/split_query_aux_priv.cpp:34:
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long int}; _Tp = long long int; _Alloc = std::allocator<long long int>]':
/usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector<long long int>::iterator {aka __gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/vector.tcc: In function 'void ncbi::blast::SplitQuery_SetEffectiveSearchSpace(ncbi::CRef<ncbi::blast::CBlastOptions>, ncbi::CRef<ncbi::blast::IQueryFactory>, ncbi::CRef<ncbi::blast::SInternalData>)':
/usr/include/c++/7/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/sseqloc.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/winmask_filter.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/winmask_filter.cpp:38:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/seqsrc_seqdb.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/subj_ranges_set.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/subj_ranges_set.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/sseqloc.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/winmask_filter.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/winmask_filter.cpp:38:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/rpsblast_local.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/seedtop.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seedtop.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/cdd_pssm_input.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/cdd_pssm_input.cpp:38:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/seedtop.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seedtop.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_advprot_options.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/psiblast_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/deltablast_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/deltablast_options.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:69:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/rpsblast_local.cpp:34:
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long int>}; _Tp = std::pair<std::__cxx11::basic_string<char>, long long int>; _Alloc = std::allocator<std::pair<std::__cxx11::basic_string<char>, long long int> >]':
/usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> >::iterator {aka __gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/algorithm:62:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/rpsblast_local.cpp:34:
/usr/include/c++/7/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const std::pair<std::__cxx11::basic_string<char>, long long int>&, const std::pair<std::__cxx11::basic_string<char>, long long int>&)>]':
/usr/include/c++/7/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >' changed in GCC 7.1
__unguarded_linear_insert(_RandomAccessIterator __last,
^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const std::pair<std::__cxx11::basic_string<char>, long long int>&, const std::pair<std::__cxx11::basic_string<char>, long long int>&)>]':
/usr/include/c++/7/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >' changed in GCC 7.1
__insertion_sort(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >' changed in GCC 7.1
In file included from /usr/include/c++/7/bits/stl_algo.h:61:0,
from /usr/include/c++/7/algorithm:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/rpsblast_local.cpp:34:
/usr/include/c++/7/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >; _Distance = int; _Tp = std::pair<std::__cxx11::basic_string<char>, long long int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const std::pair<std::__cxx11::basic_string<char>, long long int>&, const std::pair<std::__cxx11::basic_string<char>, long long int>&)>]':
/usr/include/c++/7/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >' changed in GCC 7.1
__adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
^~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_heap.h: In function 'void std::__make_heap(_RandomAccessIterator, _RandomAccessIterator, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const std::pair<std::__cxx11::basic_string<char>, long long int>&, const std::pair<std::__cxx11::basic_string<char>, long long int>&)>]':
/usr/include/c++/7/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >' changed in GCC 7.1
__make_heap(_RandomAccessIterator __first, _RandomAccessIterator __last,
^~~~~~~~~~~
/usr/include/c++/7/bits/stl_heap.h:326:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >' changed in GCC 7.1
In file included from /usr/include/c++/7/algorithm:62:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/rpsblast_local.cpp:34:
/usr/include/c++/7/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const std::pair<std::__cxx11::basic_string<char>, long long int>&, const std::pair<std::__cxx11::basic_string<char>, long long int>&)>]':
/usr/include/c++/7/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >' changed in GCC 7.1
__introsort_loop(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >' changed in GCC 7.1
std::__introsort_loop(__cut, __last, __depth_limit, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1672:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >' changed in GCC 7.1
std::__make_heap(__first, __middle, __comp);
~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
LE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/winmask_filter.cpp -o winmask_filter.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/subj_ranges_set.cpp -o subj_ranges_set.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/rpsblast_local.cpp -o rpsblast_local.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seedtop.cpp -o seedtop.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/cdd_pssm_input.cpp -o cdd_pssm_input.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/deltablast_options.cpp -o deltablast_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncIn file included from /usr/include/c++/7/vector:69:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/rpsblast_local.cpp:34:
/usr/include/c++/7/bits/vector.tcc: In member function 'ncbi::CRef<ncbi::blast::CSearchResultSet> ncbi::blast::CLocalRPSBlast::RunThreadedSearch()':
/usr/include/c++/7/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/algorithm:62:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/rpsblast_local.cpp:34:
/usr/include/c++/7/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >' changed in GCC 7.1
std::__introsort_loop(__first, __last,
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
std::__lg(__last - __first) * 2,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__comp);
~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >' changed in GCC 7.1
std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long int> > >' changed in GCC 7.1
std::__insertion_sort(__first, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_advprot_options.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/psiblast_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/deltablast_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/deltablast_options.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/psiblast.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/deltablast.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:69:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/cdd_pssm_input.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/cdd_pssm_input.cpp:38:
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = PSICdMsaCellData; _Alloc = std::allocator<PSICdMsaCellData>]':
/usr/include/c++/7/bits/vector.tcc:458:5: note: parameter passing for argument of type 'std::vector<PSICdMsaCellData>::iterator {aka __gnu_cxx::__normal_iterator<PSICdMsaCellData*, std::vector<PSICdMsaCellData> >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:64:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/cdd_pssm_input.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/cdd_pssm_input.cpp:38:
/usr/include/c++/7/bits/stl_vector.h: In member function 'void ncbi::blast::CCddInputData::CHitSegment::FillData(int, const ncbi::blast::CBlastRPSInfo&)':
/usr/include/c++/7/bits/stl_vector.h:712:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<PSICdMsaCellData*, std::vector<PSICdMsaCellData> >' changed in GCC 7.1
_M_fill_insert(end(), __new_size - size(), __x);
~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/magicblast_options.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/magicblast_options.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/general/User_object_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/general/User_object.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/magicblast.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
bi-blast+-2.7.1/c++/src/algo/blast/api/deltablast.cpp -o deltablast.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/magicblast_options.cpp -o magicblast_options.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/api/magicblast.cpp -o magicblast.o
/bin/rm -f libxblast.so .libxblast.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxblast.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blast_aux.o blast_options_cxx.o blast_options_local_priv.o blast_options_builder.o blast_setup_cxx.o blast_seqalign.o blast_options_handle.o blast_nucl_options.o disc_nucl_options.o blast_prot_options.o psiblast_options.o blast_rps_options.o blastx_options.o tblastx_options.o tblastn_options.o rpstblastn_options.o phiblast_nucl_options.o phiblast_prot_options.o pssm_engine.o local_blast.o remote_blast.o seqinfosrc_seqvec.o seqinfosrc_seqdb.o seqinfosrc_bioseq.o seqsrc_multiseq.o seqsrc_seqdb.o seqsrc_query_factory.o bl2seq.o blast_objmgr_tools.o repeats_filter_cxx.o blast_mtlock.o psibl2seq.o local_db_adapter.o psiblast.o psiblast_impl.o psiblast_iteration.o psi_pssm_input.o msa_pssm_input.o psiblast_aux_priv.o blast_aux_priv.o blast_advprot_options.o blastp_kmer_options.o version.o dust_filter.o rps_aux.o search_strategy.o setup_factory.o prelim_stage.o traceback_stage.o uniform_search.o local_search.o blast_results.o remote_search.o query_data.o objmgr_query_data.o objmgrfree_query_data.o bioseq_extract_data_priv.o effsearchspace_calc.o blast_seqinfosrc_aux.o blast_dbindex.o split_query_cxx.o split_query_aux_priv.o split_query_blk.o winmask_filter.o subj_ranges_set.o rpsblast_local.o seedtop.o cdd_pssm_input.o deltablast_options.o deltablast.o magicblast_options.o magicblast.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lblast -lseqdb -lseqset -lseq -lgeneral -lxser -lxconnect -lsequtil -ltables -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxblast.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxblast.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libxblast.so
/bin/ln -f .xblast.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.xblast.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api'
cd algo/blast/blastinput/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=blastinput UNIX_PROJ="" sources= configurables=configurables.null
cd algo/blast/proteinkmer/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=proteinkmer UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput'
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer TMPL=proteinkmer -w -j --jobserver-fds=3,4 all
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput TMPL=blastinput -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/proteinkmer/blastkmeroptions.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmeroptions.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/proteinkmer/blastkmerindex.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmerindex.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/sequtil/sequtil_convert.hpp:34,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmer.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_loc_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_loc.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_input.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_fasta_input.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_loc_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_loc.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_input.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_fasta_input.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /usr/include/c++/7/vector:69:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/sequtil/sequtil_convert.hpp:34,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmer.cpp:34:
/usr/include/c++/7/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::iterator) [with _Tp = std::pair<unsigned int, double>; _Alloc = std::allocator<std::pair<unsigned int, double> >]':
/usr/include/c++/7/bits/vector.tcc:165:5: note: parameter passing for argument of type 'std::vector<std::pair<unsigned int, double> >::iterator {aka __gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/vector.tcc:165:5: note: parameter passing for argument of type 'std::vector<std::pair<unsigned int, double> >::iterator {aka __gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >}' changed in GCC 7.1
/usr/include/c++/7/bits/vector.tcc:165:5: note: parameter passing for argument of type 'std::vector<std::pair<unsigned int, double> >::iterator {aka __gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >}' changed in GCC 7.1
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >; _Tp = std::pair<unsigned int, double>; _Alloc = std::allocator<std::pair<unsigned int, double> >]':
/usr/include/c++/7/bits/vector.tcc:630:7: note: parameter passing for argument of type 'std::vector<std::pair<unsigned int, double> >::iterator {aka __gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/vector.tcc:630:7: note: parameter passing for argument of type 'std::vector<std::pair<unsigned int, double> >::iterator {aka __gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >}' changed in GCC 7.1
/usr/include/c++/7/bits/vector.tcc:630:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
/usr/include/c++/7/bits/vector.tcc:630:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
/usr/include/c++/7/bits/vector.tcc:630:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
In file included from /usr/include/c++/7/algorithm:62:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/sequtil/sequtil_convert.hpp:34,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmer.cpp:34:
/usr/include/c++/7/bits/stl_algo.h: In function 'void std::__move_median_to_first(_Iterator, _Iterator, _Iterator, _Iterator, _Compare) [with _Iterator = __gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const std::pair<unsigned int, double>&, const std::pair<unsigned int, double>&)>]':
/usr/include/c++/7/bits/stl_algo.h:78:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
__move_median_to_first(_Iterator __result,_Iterator __a, _Iterator __b,
^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:78:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h:78:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h:78:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const std::pair<unsigned int, double>&, const std::pair<unsigned int, double>&)>]':
/usr/include/c++/7/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
__unguarded_linear_insert(_RandomAccessIterator __last,
^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const std::pair<unsigned int, double>&, const std::pair<unsigned int, double>&)>]':
/usr/include/c++/7/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
__insertion_sort(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
In file included from /usr/include/c++/7/bits/stl_algo.h:61:0,
from /usr/include/c++/7/algorithm:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/sequtil/sequtil_convert.hpp:34,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmer.cpp:34:
/usr/include/c++/7/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >; _Distance = int; _Tp = std::pair<unsigned int, double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const std::pair<unsigned int, double>&, const std::pair<unsigned int, double>&)>]':
/usr/include/c++/7/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
__adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
^~~~~~~~~~~~~
In file included from /usr/include/c++/7/algorithm:62:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/sequtil/sequtil_convert.hpp:34,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmer.cpp:34:
/usr/include/c++/7/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const std::pair<unsigned int, double>&, const std::pair<unsigned int, double>&)>]':
/usr/include/c++/7/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
__introsort_loop(_RandomAccessIterator __first,
^~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h:1921:34: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
std::__move_median_to_first(__first, __first + 1, __mid, __last - 1,
~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__comp);
~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1921:34: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
/usr/include/c++/7/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
std::__introsort_loop(__cut, __last, __depth_limit, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:64:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/sequtil/sequtil_convert.hpp:34,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmer.cpp:34:
/usr/include/c++/7/bits/stl_vector.h: In member function 'ncbi::CRef<ncbi::blast::CBlastKmerResultsSet> ncbi::blast::CBlastKmer::x_SearchMultipleQueries(int, int, const ncbi::SBlastKmerParameters&, uint32_t*, uint32_t*, std::vector<std::vector<int> >&, std::vector<int>)':
/usr/include/c++/7/bits/stl_vector.h:1406:19: note: parameter passing for argument of type 'std::vector<std::pair<unsigned int, double> >::iterator {aka __gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >}' changed in GCC 7.1
_M_range_insert(__pos, __first, __last,
~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
std::__iterator_category(__first));
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_vector.h:1406:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
In file included from /usr/include/c++/7/algorithm:62:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistl.hpp:178,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_limits.hpp:61,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/sequtil/sequtil_convert.hpp:34,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmer.cpp:34:
/usr/include/c++/7/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
std::__introsort_loop(__first, __last,
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
std::__lg(__last - __first) * 2,
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__comp);
~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
std::__insertion_sort(__first, __last, __comp);
~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:64:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/sequtil/sequtil_convert.hpp:34,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmer.cpp:34:
/usr/include/c++/7/bits/stl_vector.h:1210:71: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
^
/usr/include/c++/7/bits/stl_vector.h:1210:71: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
^
/usr/include/c++/7/bits/stl_vector.h:1210:71: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_scope_src.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_scope_src.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_args.cpp:39:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/proteinkmer/blastkmerresults.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmerresults.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/cmdline_flags.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/cmdline_flags.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp:431:0: warning: ignoring #pragma ivdep [-Wunknown-pragmas]
#pragma ivdep
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:69:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/proteinkmer/blastkmerresults.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmerresults.cpp:34:
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::pair<ncbi::CRef<ncbi::objects::CSeq_id, ncbi::CObjectCounterLocker>, double>&}; _Tp = std::pair<ncbi::CRef<ncbi::objects::CSeq_id>, double>; _Alloc = std::allocator<std::pair<ncbi::CRef<ncbi::objects::CSeq_id>, double> >]':
/usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector<std::pair<ncbi::CRef<ncbi::objects::CSeq_id>, double> >::iterator {aka __gnu_cxx::__normal_iterator<std::pair<ncbi::CRef<ncbi::objects::CSeq_id>, double>*, std::vector<std::pair<ncbi::CRef<ncbi::objects::CSeq_id>, double> > >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:64:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/proteinkmer/blastkmerresults.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmerresults.cpp:34:
/usr/include/c++/7/bits/stl_vector.h: In member function 'void ncbi::blast::CBlastKmerResults::x_InitScoreVec(ncbi::TBlastKmerPrelimScoreVector&)':
/usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<ncbi::CRef<ncbi::objects::CSeq_id>, double>*, std::vector<std::pair<ncbi::CRef<ncbi::objects::CSeq_id>, double> > >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/sseqloc.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_input_aux.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_input_aux.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_input.cpp -o blast_input.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_fasta_input.cpp -o blast_fasta_input.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_scope_src.cpp -o blast_scope_src.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_args.cpp -o blast_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/cmdline_flags.cpp -o cmdline_flags.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_input_aux.cpp -o blast_input_aux.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp: In function 'void ncbi::neighbor_query(const std::vector<std::vector<unsigned int> >&, const uint64_t*, std::vector<std::set<unsigned int> >&, ncbi::blast::CMinHashFile&, int, int, double, ncbi::TBlastKmerPrelimScoreVector&, ncbi::BlastKmerStats&, int)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp:791:17: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (last_oid == *i)
~~~~~~~~~^~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blastp_args.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blastp_args.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/sseqloc.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_input_aux.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_input_aux.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /usr/include/c++/7/map:60:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:45,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp:34:
/usr/include/c++/7/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const int&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, double>; _KeyOfValue = std::_Select1st<std::pair<const int, double> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/7/bits/stl_tree.h:2395:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, double> >}' changed in GCC 7.1
_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:69:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp:34:
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<unsigned int, double>}; _Tp = std::pair<unsigned int, double>; _Alloc = std::allocator<std::pair<unsigned int, double> >]':
/usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector<std::pair<unsigned int, double> >::iterator {aka __gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:69:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_args.cpp:39:
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector<double>::iterator {aka __gnu_cxx::__normal_iterator<double*, std::vector<double> >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/vector.tcc: In member function 'virtual void ncbi::blast::CMappingArgs::ExtractAlgorithmOptions(const ncbi::CArgs&, ncbi::blast::CBlastOptions&)':
/usr/include/c++/7/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/map:61:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:45,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp:34:
/usr/include/c++/7/bits/stl_map.h: In function 'void ncbi::neighbor_query(const std::vector<std::vector<unsigned int> >&, const uint64_t*, std::vector<std::set<unsigned int> >&, ncbi::blast::CMinHashFile&, int, int, double, ncbi::TBlastKmerPrelimScoreVector&, ncbi::BlastKmerStats&, int)':
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, double> >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:493:4: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const int, double> >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
In file included from /usr/include/c++/7/vector:69:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp:34:
/usr/include/c++/7/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/mhfile.cpp:84:0: warning: ignoring #pragma ivdep [-Wunknown-pragmas]
#pragma ivdep
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/mhfile.cpp:91:0: warning: ignoring #pragma ivdep [-Wunknown-pragmas]
#pragma ivdep
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/mhfile.cpp:98:0: warning: ignoring #pragma ivdep [-Wunknown-pragmas]
#pragma ivdep
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/proteinkmer/mhfile.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/mhfile.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/mhfile.cpp: In member function 'void ncbi::blast::CMinHashFile::GetMinHits(int, int&, std::vector<unsigned int>&) const':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/mhfile.cpp:77:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (hits.size() < numHashes)
~~~~~~~~~~~~^~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmer.cpp -o blastkmer.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmerindex.cpp -o blastkmerindex.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmeroptions.cpp -o blastkmeroptions.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmerresults.cpp -o blastkmerresults.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp -o blastkmerutils.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/mhfile.cpp -o mhfile.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -WerroIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/pearson.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/pearson.cpp:38:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blastn_args.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blastn_args.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/rmblastn_args.hpp:21,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/rmblastn_args.cpp:20:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/kblastapi.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blastx_args.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blastx_args.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/tblastn_args.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/tblastn_args.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/tblastx_args.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/tblastx_args.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blastp_args.cpp -o blastp_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blastn_args.cpp -o blastn_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/rmblastn_args.cpp -o rmblastn_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blastx_args.cpp -o blastx_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/tblastn_args.cpp -o tblastn_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/tblastx_args.cpp -o tblastx_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -WIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/psiblast_args.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/psiblast_args.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
r=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/pearson.cpp -o pearson.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/kblastapi.cpp -o kblastapi.o
/bin/rm -f libproteinkmer.so .libproteinkmer.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libproteinkmer.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blastkmer.o blastkmerindex.o blastkmeroptions.o blastkmerresults.o blastkmerutils.o mhfile.o pearson.o kblastapi.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libproteinkmer.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libproteinkmer.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libproteinkmer.so
/bin/ln -f .proteinkmer.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.proteinkmer.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer'
cd algo/blast/format/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=xblastformat UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/format TMPL=xblastformat -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/version.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/version.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/format/blastfmtutil.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastfmtutil.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastxml_format.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastxml2_format.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/rpsblast_args.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/rpsblast_args.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastxml_format.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastxml2_format.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastxml_format.cpp: In function 'void ncbi::s_SeqAlignSetToXMLHits(std::__cxx11::list<ncbi::CRef<ncbi::objects::CHit> >&, const ncbi::objects::CSeq_align_set&, ncbi::objects::CScope*, const ncbi::CBlastFormattingMatrix*, const ncbi::TMaskedQueryRegions*, bool, int, int, ncbi::CNcbiOstream*)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastxml_format.cpp:501:86: warning: 'ncbi::CObjectOStreamXml::CObjectOStreamXml(ncbi::CNcbiOstream&, bool)' is deprecated [-Wdeprecated-declarations]
auto_ptr<CObjectOStreamXml> xml_one_hit_os (new CObjectOStreamXml (one_hit_os,false));
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:39:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastxml_format.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/objostrxml.hpp:66:26: note: declared here
NCBI_DEPRECATED_CTOR(CObjectOStreamXml(CNcbiOstream& out, bool deleteOut));
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimisc.hpp:1099:38: note: in definition of macro 'NCBI_DEPRECATED_CTOR'
# define NCBI_DEPRECATED_CTOR(decl) decl NCBI_DEPRECATED
^~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastxml_format.cpp: In function 'bool ncbi::s_SerializeAndSplitBy(const ncbi::CSerialObject&, const char*, std::__cxx11::string&, std::__cxx11::string&, bool, bool)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastxml_format.cpp:785:89: warning: 'ncbi::CObjectOStreamXml::CObjectOStreamXml(ncbi::CNcbiOstream&, bool)' is deprecated [-Wdeprecated-declarations]
auto_ptr<CObjectOStreamXml> xml_one_iter_os(new CObjectOStreamXml (one_iter_ss_os,false));
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:39:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastxml_format.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/objostrxml.hpp:66:26: note: declared here
NCBI_DEPRECATED_CTOR(CObjectOStreamXml(CNcbiOstream& out, bool deleteOut));
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimisc.hpp:1099:38: note: in definition of macro 'NCBI_DEPRECATED_CTOR'
# define NCBI_DEPRECATED_CTOR(decl) decl NCBI_DEPRECATED
^~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/rpstblastn_args.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/rpstblastn_args.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cd algo/blast/igblast/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=igblast UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/igblast TMPL=igblast -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/setup_factory.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/igblast/igblast.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/igblast/igblast.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/sseqloc.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/format/blast_format.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_format.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Seq_annot_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Seq_annot.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/format/data4xmlformat.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/igblastn_args.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/igblastn_args.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/format/data4xmlformat.cpp:37:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/format/data4xmlformat.hpp: In member function 'virtual std::__cxx11::string ncbi::CCmdLineBlastXMLReportData::GetFilterString() const':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/format/data4xmlformat.hpp:155:39: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations]
m_Options.GetFilterString(); /* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/uniform_search.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/format/data4xmlformat.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/format/data4xmlformat.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:171:27: note: declared here
NCBI_DEPRECATED char* GetFilterString() const;
^~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/sseqloc.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/format/blast_format.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_format.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_format.cpp:49:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/format/data4xmlformat.hpp: In member function 'virtual std::__cxx11::string ncbi::CCmdLineBlastXMLReportData::GetFilterString() const':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/format/data4xmlformat.hpp:155:39: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations]
m_Options.GetFilterString(); /* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/uniform_search.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/format/blast_format.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_format.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:171:27: note: declared here
NCBI_DEPRECATED char* GetFilterString() const;
^~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_format.cpp:51:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/format/data4xml2format.hpp: In member function 'virtual std::__cxx11::string ncbi::CCmdLineBlastXML2ReportData::GetFilterString() const':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/format/data4xml2format.hpp:140:40: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations]
m_Options->GetFilterString(); /* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/uniform_search.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/format/blast_format.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_format.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:171:27: note: declared here
NCBI_DEPRECATED char* GetFilterString() const;
^~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_format.cpp: In member function 'void ncbi::CBlastFormat::x_SplitSeqAlign(ncbi::CConstRef<ncbi::objects::CSeq_align_set>, ncbi::objects::CSeq_align_set&, ncbi::objects::CSeq_align_set&, ncbi::blast::CPsiBlastIterationState::TSeqIds&)':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_format.cpp:520:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if(count >= m_NumSummary)
~~~~~~^~~~~~~~~~~~~~~
cd algo/blast/proteinkmer/unit_test/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=proteinkmer_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer/unit_test'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/unit_test TMPL=proteinkmer_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/igblastp_args.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/igblastp_args.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/unit_test/proteinkmer_unit_test.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/igblast/igblast.cpp -o igblast.o
/bin/rm -f libigblast.so .libigblast.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libigblast.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC igblast.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxconnect -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libigblast.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libigblast.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libigblast.so
/bin/ln -f .igblast.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.igblast.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=aalookup_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=aalookup_unit_test -w -j --jobserver-fds=3,4 all
In file included from /usr/include/c++/7/vector:69:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/sseqloc.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/format/blast_format.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_format.cpp:37:
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_assign_aux(_ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator<const ncbi::align_format::CAlignFormatUtil::SDbInfo*, std::vector<ncbi::align_format::CAlignFormatUtil::SDbInfo> >; _Tp = ncbi::align_format::CAlignFormatUtil::SDbInfo; _Alloc = std::allocator<ncbi::align_format::CAlignFormatUtil::SDbInfo>]':
/usr/include/c++/7/bits/vector.tcc:278:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const ncbi::align_format::CAlignFormatUtil::SDbInfo*, std::vector<ncbi::align_format::CAlignFormatUtil::SDbInfo> >' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/vector.tcc:278:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const ncbi::align_format::CAlignFormatUtil::SDbInfo*, std::vector<ncbi::align_format::CAlignFormatUtil::SDbInfo> >' changed in GCC 7.1
In file included from /usr/include/c++/7/vector:64:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/sseqloc.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/format/blast_format.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_format.cpp:37:
/usr/include/c++/7/bits/stl_vector.h: In constructor 'ncbi::CBlastFormat::CBlastFormat(const ncbi::blast::CBlastOptions&, const std::vector<ncbi::align_format::CAlignFormatUtil::SDbInfo>&, ncbi::blast::CFormattingArgs::EOutputFormat, bool, ncbi::CNcbiOstream&, int, int, ncbi::objects::CScope&, bool, bool, bool, const string&, bool, const string&)':
/usr/include/c++/7/bits/stl_vector.h:1369:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const ncbi::align_format::CAlignFormatUtil::SDbInfo*, std::vector<ncbi::align_format::CAlignFormatUtil::SDbInfo> >' changed in GCC 7.1
{ _M_assign_aux(__first, __last, std::__iterator_category(__first)); }
~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/aalookup_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/aalookup_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/deltablast_args.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/deltablast_args.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Seq_annot_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seq/Seq_annot.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/format/data4xml2format.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/format/data4xml2format.cpp:36:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/format/data4xml2format.hpp: In member function 'virtual std::__cxx11::string ncbi::CCmdLineBlastXML2ReportData::GetFilterString() const':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/format/data4xml2format.hpp:140:40: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations]
m_Options->GetFilterString(); /* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/uniform_search.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/format/data4xml2format.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/format/data4xml2format.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:171:27: note: declared here
NCBI_DEPRECATED char* GetFilterString() const;
^~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:69:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/unit_test/proteinkmer_unit_test.cpp:37:
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::pair<unsigned int, double>&}; _Tp = std::pair<unsigned int, double>; _Alloc = std::allocator<std::pair<unsigned int, double> >]':
/usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector<std::pair<unsigned int, double> >::iterator {aka __gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:64:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/unit_test/proteinkmer_unit_test.cpp:37:
/usr/include/c++/7/bits/stl_vector.h: In member function 'void proteinkmers::KmerResults::test_method()':
/usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/7/bits/stl_vector.h: In member function 'void proteinkmers::KmerResultsSetPushBack::test_method()':
/usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
date-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/psiblast_args.cpp -o psiblast_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/rpsblast_args.cpp -o rpsblast_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/rpstblastn_args.cpp -o rpstblastn_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/igblastn_args.cpp -o igblastn_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/igblastp_args.cpp -o igblastp_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/deltablast_args.cpp -o deltablast_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blasmake[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/aalookup_unit_test.cpp -o aalookup_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie aalookup_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o aalookup_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f aalookup_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f aalookup_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/aalookup_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/magicblast_args.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/magicblast_args.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastfmtutil.cpp -o blastfmtutil.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastxml_format.cpp -o blastxml_format.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastxml2_format.cpp -o blastxml2_format.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_format.cpp -o blast_format.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/format/data4xmlformat.cpp -o data4xmlformat.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/format/data4xml2format.cpp -o data4xml2format.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-mIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/kblastp_args.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/kblastp_args.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/format/build_archive.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/stl_vector.h: In member function 'void proteinkmers::KmerResultsSet::test_method()':
/usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_args.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/magicblast_args.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/magicblast_args.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer/unit_test'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/unit_test/proteinkmer_unit_test.cpp -o proteinkmer_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie proteinkmer_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o proteinkmer_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f proteinkmer_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f proteinkmer_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/proteinkmer_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer/unit_test'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer/unit_test'
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/sseqloc.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/format/blast_format.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/format/vecscreen_run.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Seq_align_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Seq_align.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/format/sam_formatter.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/format/sam.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/format/sam.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/util/sequence.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_asn1_input.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=aascan_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=aascan_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/util/sequence.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_asn1_input.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/sseqloc.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/format/blast_format.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/format/vecscreen_run.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=blastdiag_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=blastdiag_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastdiag_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
t+-2.7.1/c++/src/algo/blast/blastinput/magicblast_args.cpp -o magicblast_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/kblastp_args.cpp -o kblastp_args.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_asn1_input.cpp -o blast_asn1_input.o
/bin/rm -f libblastinput.so .libblastinput.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libblastinput.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blast_input.o blast_fasta_input.o blast_scope_src.o blast_args.o cmdline_flags.o blast_input_aux.o blastp_args.o blastn_args.o rmblastn_args.o blastx_args.o tblastn_args.o tblastx_args.o psiblast_args.o rpsblast_args.o rpstblastn_args.o igblastn_args.o igblastp_args.o deltablast_args.o magicblast_args.o kblastp_args.o blast_asn1_input.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lxblast -lalign_format -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lseqdb -lxobjread -lxobjread -lvariation -lcreaders -lsubmit -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lxutil -lncbi_xloader_genbank -lncbi_xreader_id2 -lncbi_xreader -lscoremat -lseqset -lseq -lxser -lxutil -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastinput.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libblastinput.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libblastinput.so
/bin/ln -f .blastinput.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.blastinput.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=blastengine_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=blastengine_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastdiag_unit_test.cpp -o blastdiag_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastdiag_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o blastdiag_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdiag_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blastdiag_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/blastdiag_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=blastextend_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=blastextend_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/format/blast_async_format.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_async_format.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastextend_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp -o aascan_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie aascan_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o aascan_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f aascan_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f aascan_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/aascan_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=blastfilter_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=blastfilter_unit_test -w -j --jobserver-fds=3,4 all
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp: In member function 'void blastengine::testBlastpPrelimSearch::test_method()':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp:452:33: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
options->SetFilterString("L"); /* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_nucl_options.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp:53:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/format/blast_async_format.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_async_format.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastfilter_unit_test.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastextend_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_async_format.cpp: In member function 'virtual void* CBlastAsyncFormatThread::Main()':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_async_format.cpp:122:28: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (m_ResultsMap.size() != currNum)
~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastfilter_unit_test.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp -o blastengine_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastengine_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o blastengine_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastengine_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blastengine_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/blastengine_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=blasthits_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=blasthits_unit_test -w -j --jobserver-fds=3,4 all
ap=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/format/build_archive.cpp -o build_archive.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/format/vecscreen_run.cpp -o vecscreen_run.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/format/sam.cpp -o sam.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_async_format.cpp -o blast_async_format.o
/bin/rm -f libxblastformat.so .libxblastformat.so.stamp
/usr/bin/g++ -std=gnu++11 -shared -o libxblastformat.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blastfmtutil.o blastxml_format.o blastxml2_format.o blast_format.o data4xmlformat.o data4xml2format.o build_archive.o vecscreen_run.o sam.o blast_async_format.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lxformat -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lalign_format -lblastxml -lblastxml2 -lxhtml -lxcgi -lxncbi -ldl -lm -lpthread
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxblastformat.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib
/bin/ln -f libxblastformat.so /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib/libxblastformat.so
/bin/ln -f .xblastformat.dep /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/status/.xblastformat.dep
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=blastoptions_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=blastoptions_unit_test -w -j --jobserver-fds=3,4 all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastextend_unit_test.cpp -o blastextend_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastextend_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o blastextend_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastextend_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blastextend_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/blastextend_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=blastsetup_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=blastsetup_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blasthits_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/util_misc.hpp:33,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastsetup_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blasthits_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:35:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp: In member function 'void blastoptions::RemoteOptionsTest::test_method()':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:73:60: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
BOOST_CHECK_NO_THROW(opts.SetFilterString("m L", false)); /* NCBI_FAKE_WARNING */
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:146:9: note: in definition of macro 'BOOST_CHECK_NO_THROW_IMPL'
S; \
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp: In member function 'void blastoptions::testRemoteFilterString::test_method()':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1329:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
opts.SetFilterString("F", true);/* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1333:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
opts.SetFilterString("T", true);/* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1338:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
opts.SetFilterString("F", true);/* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1340:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
opts.SetFilterString("T", true);/* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1344:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
opts.SetFilterString("F", true);/* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1346:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
opts.SetFilterString("T", true);/* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1350:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
opts.SetFilterString("F", true);/* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1352:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
opts.SetFilterString("T", true);/* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1356:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
opts.SetFilterString("F", true);/* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1358:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations]
opts.SetFilterString("T", true);/* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here
NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true);
^~~~~~~~~~~~~~~
In file included from /usr/include/boost/test/test_tools.hpp:45:0,
from /usr/include/boost/test/unit_test.hpp:18,
from /usr/include/boost/test/auto_unit_test.hpp:16,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:67,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp: In member function 'void blastoptions::testOptionsDeepCopy::test_method()':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1397:57: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations]
BOOST_CHECK_EQUAL(string(optsClone->GetFilterString()), string("L;m;")); /* NCBI_FAKE_WARNING */
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:171:27: note: declared here
NCBI_DEPRECATED char* GetFilterString() const;
^~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/util_misc.hpp:33,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastsetup_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../core /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blasthits_unit_test.cpp -o blasthits_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blasthits_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o blasthits_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blasthits_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blasthits_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/blasthits_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=delta_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=delta_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/delta_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp -o blastoptions_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastoptions_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o blastoptions_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastoptions_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blastoptions_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/blastoptions_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=gapinfo_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=gapinfo_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/delta_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/gapinfo_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastfilter_unit_test.cpp -o blastfilter_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastfilter_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o blastfilter_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastfilter_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blastfilter_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/blastfilter_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=gencode_singleton_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=gencode_singleton_unit_test -w -j --jobserver-fds=3,4 all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/gapinfo_unit_test.cpp -o gapinfo_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie gapinfo_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxconnect -lxncbi -ldl -lm -lpthread -o gapinfo_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f gapinfo_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f gapinfo_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/gapinfo_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=hspfilter_besthit_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=hspfilter_besthit_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/sseqloc.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/gencode_singleton_unit_test.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/hspfilter_besthit_unit_test.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastsetup_unit_test.cpp -o blastsetup_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastsetup_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o blastsetup_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastsetup_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blastsetup_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/blastsetup_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=hspfilter_culling_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=hspfilter_culling_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/hspfilter_culling_unit_test.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/delta_unit_test.cpp -o delta_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie delta_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqalign_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o delta_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f delta_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f delta_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/delta_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=hspstream_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=hspstream_unit_test -w -j --jobserver-fds=3,4 all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/hspfilter_besthit_unit_test.cpp -o hspfilter_besthit_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie hspfilter_besthit_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o hspfilter_besthit_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f hspfilter_besthit_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f hspfilter_besthit_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/hspfilter_besthit_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=linkhsp_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=linkhsp_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/hspstream_unit_test.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/gencode_singleton_unit_test.cpp -o gencode_singleton_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie gencode_singleton_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o gencode_singleton_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f gencode_singleton_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f gencode_singleton_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/gencode_singleton_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/linkhsp_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/hspfilter_culling_unit_test.cpp -o hspfilter_culling_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie hspfilter_culling_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o hspfilter_culling_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f hspfilter_culling_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f hspfilter_culling_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/hspfilter_culling_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=magicblast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=magicblast_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr.hpp:46,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/hspstream_test_util.hpp:41,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/hspstream_test_util.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=msa2pssm_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=msa2pssm_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/magicblast_unit_test.cpp:32:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/linkhsp_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/msa2pssm_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/hspstream_unit_test.cpp -o hspstream_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/hspstream_test_util.cpp -o hspstream_test_util.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie hspstream_unit_test.o hspstream_test_util.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o hspstream_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f hspstream_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f hspstream_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/hspstream_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=ntlookup_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=ntlookup_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/ntlookup_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/linkhsp_unit_test.cpp -o linkhsp_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie linkhsp_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o linkhsp_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f linkhsp_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f linkhsp_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/linkhsp_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=ntscan_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=ntscan_unit_test -w -j --jobserver-fds=3,4 all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/msa2pssm_unit_test.cpp -o msa2pssm_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie msa2pssm_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o msa2pssm_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f msa2pssm_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f msa2pssm_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/msa2pssm_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=optionshandle_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=optionshandle_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/ntlookup_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/ntscan_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/optionshandle_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/magicblast_unit_test.cpp -o magicblast_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie magicblast_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -lm -lpthread -o magicblast_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f magicblast_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f magicblast_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/magicblast_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=phiblast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=phiblast_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/phiblast_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/ntscan_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/phiblast_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/ntlookup_unit_test.cpp -o ntlookup_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie ntlookup_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o ntlookup_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f ntlookup_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f ntlookup_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/ntlookup_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=prelimsearch_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=prelimsearch_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/prelimsearch_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/phiblast_unit_test.cpp -o phiblast_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie phiblast_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o phiblast_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f phiblast_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f phiblast_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/phiblast_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=psibl2seq_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=psibl2seq_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/psibl2seq_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/prelimsearch_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/ntscan_unit_test.cpp -o ntscan_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie ntscan_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o ntscan_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f ntscan_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f ntscan_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/ntscan_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=psiblast_iteration_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=psiblast_iteration_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/psibl2seq_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/psiblast_iteration_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/optionshandle_unit_test.cpp -o optionshandle_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie optionshandle_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o optionshandle_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f optionshandle_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f optionshandle_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/optionshandle_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=psiblast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=psiblast_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/psiblast_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/prelimsearch_unit_test.cpp -o prelimsearch_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie prelimsearch_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o prelimsearch_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f prelimsearch_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f prelimsearch_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/prelimsearch_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=pssmcreate_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=pssmcreate_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssmcreate_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/psiblast_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/psiblast_iteration_unit_test.cpp -o psiblast_iteration_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie psiblast_iteration_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o psiblast_iteration_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f psiblast_iteration_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f psiblast_iteration_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/psiblast_iteration_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=pssmenginefreqratios_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/psibl2seq_unit_test.cpp -o psibl2seq_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie psibl2seq_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o psibl2seq_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f psibl2seq_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f psibl2seq_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/psibl2seq_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=pssmenginefreqratios_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssm_test_util.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssmenginefreqratios_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssmcreate_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssm_test_util.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssmenginefreqratios_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^
In file included from /usr/include/c++/7/vector:69:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssmenginefreqratios_unit_test.cpp:34:
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/7/bits/vector.tcc:458:5: note: parameter passing for argument of type 'std::vector<double>::iterator {aka __gnu_cxx::__normal_iterator<double*, std::vector<double> >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=querydata_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=querydata_unit_test -w -j --jobserver-fds=3,4 all
In file included from /usr/include/c++/7/vector:64:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssmenginefreqratios_unit_test.cpp:34:
/usr/include/c++/7/bits/stl_vector.h: In member function 'void PssmEngineFreqRatios::AllZerosFreqRatios::test_method()':
/usr/include/c++/7/bits/stl_vector.h:712:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
_M_fill_insert(end(), __new_size - size(), __x);
~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/querydata_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssmenginefreqratios_unit_test.cpp -o pssmenginefreqratios_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie pssmenginefreqratios_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o pssmenginefreqratios_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f pssmenginefreqratios_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f pssmenginefreqratios_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/pssmenginefreqratios_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/psiblast_unit_test.cpp -o psiblast_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie psiblast_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqalign_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o psiblast_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f psiblast_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f psiblast_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/psiblast_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=queryinfo_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=queryinfo_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssmcreate_cdd_unit_test.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/queryinfo_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/querydata_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=redoalignment_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=redoalignment_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssmcreate_cdd_unit_test.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/redoalignment_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/queryinfo_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/redoalignment_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^
In file included from /usr/include/c++/7/vector:69:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssmcreate_cdd_unit_test.cpp:35:
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = PSICdMsaCellData; _Alloc = std::allocator<PSICdMsaCellData>]':
/usr/include/c++/7/bits/vector.tcc:458:5: note: parameter passing for argument of type 'std::vector<PSICdMsaCellData>::iterator {aka __gnu_cxx::__normal_iterator<PSICdMsaCellData*, std::vector<PSICdMsaCellData> >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:64:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssmcreate_cdd_unit_test.cpp:35:
/usr/include/c++/7/bits/stl_vector.h: In constructor 'CPssmInputWithSingleCD::CPssmInputWithSingleCD()':
/usr/include/c++/7/bits/stl_vector.h:712:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<PSICdMsaCellData*, std::vector<PSICdMsaCellData> >' changed in GCC 7.1
_M_fill_insert(end(), __new_size - size(), __x);
~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/querydata_unit_test.cpp -o querydata_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie querydata_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o querydata_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f querydata_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f querydata_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/querydata_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=remote_blast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=remote_blast_unit_test -w -j --jobserver-fds=3,4 all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/queryinfo_unit_test.cpp -o queryinfo_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie queryinfo_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o queryinfo_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f queryinfo_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f queryinfo_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/queryinfo_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=rps_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=rps_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/remote_blast_unit_test.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../core /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssmcreate_unit_test.cpp -o pssmcreate_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../core /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssm_test_util.cpp -o pssm_test_util.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../core /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssmcreate_cdd_unit_test.cpp -o pssmcreate_cdd_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie pssmcreate_unit_test.o pssm_test_util.o pssmcreate_cdd_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o pssmcreate_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f pssmcreate_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f pssmcreate_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/pssmcreate_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=scoreblk_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=scoreblk_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/rps_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/scoreblk_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../core /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/redoalignment_unit_test.cpp -o redoalignment_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie redoalignment_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o redoalignment_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f redoalignment_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f redoalignment_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/redoalignment_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=search_strategy_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=search_strategy_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/remote_blast_unit_test.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/rps_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/search_strategy_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/scoreblk_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/rps_unit_test.cpp -o rps_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie rps_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o rps_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f rps_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f rps_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/rps_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=seqinfosrc_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=seqinfosrc_unit_test -w -j --jobserver-fds=3,4 all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/scoreblk_unit_test.cpp -o scoreblk_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie scoreblk_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o scoreblk_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f scoreblk_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f scoreblk_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/scoreblk_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=seqsrc_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=seqsrc_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqinfosrc_unit_test.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqsrc_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqsrc_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/search_strategy_unit_test.cpp -o search_strategy_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie search_strategy_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o search_strategy_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f search_strategy_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f search_strategy_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/search_strategy_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=setupfactory_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=setupfactory_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/setupfactory_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqinfosrc_unit_test.cpp -o seqinfosrc_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie seqinfosrc_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o seqinfosrc_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqinfosrc_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f seqinfosrc_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/seqinfosrc_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=split_query_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=split_query_unit_test -w -j --jobserver-fds=3,4 all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/remote_blast_unit_test.cpp -o remote_blast_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie remote_blast_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o remote_blast_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f remote_blast_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f remote_blast_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/remote_blast_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/random_gen.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqsrc_mock.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqsrc_mock.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/split_query_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=stat_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=stat_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/util/random_gen.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqsrc_mock.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqsrc_mock.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/stat_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/split_query_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/setupfactory_unit_test.cpp -o setupfactory_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie setupfactory_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o setupfactory_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f setupfactory_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f setupfactory_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/setupfactory_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/mockseqsrc1_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/stat_unit_test.cpp -o stat_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie stat_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o stat_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f stat_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f stat_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/stat_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=subj_ranges_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=subj_ranges_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/mockseqsrc2_unit_test.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/seqsrc_seqdb.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/subj_ranges_set.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/subj_ranges_unit_test.cpp:37:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=traceback_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=traceback_unit_test -w -j --jobserver-fds=3,4 all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/subj_ranges_unit_test.cpp -o subj_ranges_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie subj_ranges_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o subj_ranges_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f subj_ranges_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f subj_ranges_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/subj_ranges_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=tracebacksearch_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=tracebacksearch_unit_test -w -j --jobserver-fds=3,4 all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqsrc_unit_test.cpp -o seqsrc_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqsrc_mock.cpp -o seqsrc_mock.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/mockseqsrc1_unit_test.cpp -o mockseqsrc1_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/mockseqsrc2_unit_test.cpp -o mockseqsrc2_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie seqsrc_unit_test.o seqsrc_mock.o mockseqsrc1_unit_test.o mockseqsrc2_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedIn file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/traceback_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/tracebacksearch_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
line -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o seqsrc_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqsrc_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f seqsrc_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/seqsrc_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=uniform_search_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=uniform_search_unit_test -w -j --jobserver-fds=3,4 all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/split_query_unit_test.cpp -o split_query_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie split_query_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o split_query_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f split_query_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f split_query_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/split_query_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=version_reference_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=version_reference_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/uniform_search_unit_test.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/traceback_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/version_reference_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/tracebacksearch_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro 'THROWS'
THROWS((CBlastException));
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro 'THROWS'
Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException));
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/uniform_search_unit_test.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro 'THROWS'
THROWS((ncbi::blast::CBlastException));
^
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/version_reference_unit_test.cpp -o version_reference_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie version_reference_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o version_reference_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f version_reference_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f version_reference_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/version_reference_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
cd algo/blast/unit_tests/blast_format/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=blast_format_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blast_format'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format TMPL=blast_format_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_loc_.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_loc.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format/seqalignfilter_unit_test.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/tracebacksearch_unit_test.cpp -o tracebacksearch_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie tracebacksearch_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o tracebacksearch_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f tracebacksearch_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f tracebacksearch_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/tracebacksearch_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/traceback_unit_test.cpp -o traceback_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie traceback_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o traceback_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f traceback_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f traceback_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/traceback_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/uniform_search_unit_test.cpp -o uniform_search_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie uniform_search_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o uniform_search_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f uniform_search_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f uniform_search_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/uniform_search_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format/blastfmtutil_unit_test.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format/build_archive_unit_test.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format/vecscreen_run_unit_test.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format/blastfmtutil_unit_test.cpp:35:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format/build_archive_unit_test.cpp:35:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format/vecscreen_run_unit_test.cpp:35:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format/blast_format_unit_test.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cd algo/blast/unit_tests/blastdb/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=bdbloader_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blastdb'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blastdb TMPL=bdbloader_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format/blast_format_unit_test.cpp:35:0:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/blastdb/bdbloader.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blastdb/bdbloader_unit_test.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cd app/blast/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=blast_formatter LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast TMPL=blast_formatter -w -j --jobserver-fds=3,4 all
cd app/blast/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=blastn LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast TMPL=blastn -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast/blast_formatter.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast/blastn_app.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/blastdb/bdbloader.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blastdb/bdbloader_unit_test.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast/blast_formatter.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast/blastn_app.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blastdb'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include -I../ /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blastdb/bdbloader_unit_test.cpp -o bdbloader_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie bdbloader_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o bdbloader_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f bdbloader_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f bdbloader_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/bdbloader_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blastdb'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blastdb'
cd app/blast/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=blastp LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast TMPL=blastp -w -j --jobserver-fds=3,4 all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blast_format'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format/seqalignfilter_unit_test.cpp -o seqalignfilter_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format/blastfmtutil_unit_test.cpp -o blastfmtutil_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format/build_archive_unit_test.cpp -o build_archive_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format/vecscreen_run_unit_test.cpp -o vecscreen_run_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format/blast_format_unit_test.cpp -o blast_format_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie seqalignfilter_unit_test.o blastfmtutil_unit_test.o build_archive_unit_test.o vecscreen_run_unit_test.o blast_format_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -ldl -lm -lpthread -o blast_format_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_format_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blast_format_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/blast_format_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blast_format'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blast_format'
cd app/blast/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=blastx LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast TMPL=blastx -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast/blastp_app.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast/blastx_app.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast/blastn_app.cpp -o blastn_app.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastn_app.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_app_util -lxformat -lxcleanup -lvalid -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lsubmit -lxregexp -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o blastn
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blastn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/blastn
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
cd app/blast/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=deltablast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast TMPL=deltablast -w -j --jobserver-fds=3,4 all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast/blast_formatter.cpp -o blast_formatter.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blast_formatter.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o blast_formatter
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_formatter /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blast_formatter /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/blast_formatter
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
cd app/blast/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=psiblast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast TMPL=psiblast -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast/deltablast_app.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast/blastp_app.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast/blastx_app.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast/psiblast_app.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast/deltablast_app.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast/psiblast_app.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast/blastp_app.cpp -o blastp_app.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastp_app.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o blastp
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastp /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blastp /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/blastp
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
cd app/blast/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=rpsblast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast TMPL=rpsblast -w -j --jobserver-fds=3,4 all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast/blastx_app.cpp -o blastx_app.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastx_app.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o blastx
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastx /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blastx /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/blastx
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
cd app/blast/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=rpstblastn LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast TMPL=rpstblastn -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast/rpsblast_app.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast/rpstblastn_app.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast/rpsblast_app.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast/rpstblastn_app.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast/deltablast_app.cpp -o deltablast_app.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie deltablast_app.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o deltablast
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f deltablast /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f deltablast /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/deltablast
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
cd app/blast/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=seedtop LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast TMPL=seedtop -w -j --jobserver-fds=3,4 all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast/psiblast_app.cpp -o psiblast_app.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie psiblast_app.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o psiblast
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f psiblast /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f psiblast /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/psiblast
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
cd app/blast/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=tblastn LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast TMPL=tblastn -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast/seedtop_app.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast/tblastn_app.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast/seedtop_app.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast/tblastn_app.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast/rpsblast_app.cpp -o rpsblast_app.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie rpsblast_app.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o rpsblast
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f rpsblast /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f rpsblast /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/rpsblast
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
cd app/blast/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=tblastx LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast TMPL=tblastx -w -j --jobserver-fds=3,4 all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast/rpstblastn_app.cpp -o rpstblastn_app.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie rpstblastn_app.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o rpstblastn
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f rpstblastn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f rpstblastn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/rpstblastn
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
cd app/blastdb/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=blastdb_aliastool LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blastdb TMPL=blastdb_aliastool -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast/tblastx_app.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blastdb/blastdb_aliastool.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast/tblastx_app.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast/seedtop_app.cpp -o seedtop_app.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie seedtop_app.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o seedtop
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f seedtop /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f seedtop /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/seedtop
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
cd app/blastdb/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=blastdbcheck LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blastdb TMPL=blastdbcheck -w -j --jobserver-fds=3,4 all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast/tblastn_app.cpp -o tblastn_app.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie tblastn_app.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o tblastn
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f tblastn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f tblastn /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/tblastn
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
cd app/blastdb/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=blastdbcmd LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blastdb TMPL=blastdbcmd -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blastdb/blastdbcheck.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:69:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blastdb/blastdb_aliastool.cpp:35:
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long int&}; _Tp = long long int; _Alloc = std::allocator<long long int>]':
/usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector<long long int>::iterator {aka __gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:64:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blastdb/blastdb_aliastool.cpp:35:
/usr/include/c++/7/bits/stl_vector.h: In member function 'int CBlastDBAliasApp::ConvertGiFile(ncbi::CNcbiIstream&, ncbi::CNcbiOstream&, const string*, const string*) const':
/usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blastdb/blastdbcmd.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blastdb/blastdbcmd.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blastdb/blastdb_aliastool.cpp -o blastdb_aliastool.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastdb_aliastool.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lwritedb -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o blastdb_aliastool
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdb_aliastool /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blastdb_aliastool /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/blastdb_aliastool
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
cd app/blastdb/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=blastdbcp LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blastdb TMPL=blastdbcp -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blastdb/blastdbcp.cpp:31:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blast/tblastx_app.cpp -o tblastx_app.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie tblastx_app.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o tblastx
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f tblastx /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f tblastx /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/tblastx
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
cd app/blastdb/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=convert2blastmask LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blastdb TMPL=convert2blastmask -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blastdb/convert2blastmask.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blastdb/convert2blastmask.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blastdb/blastdbcheck.cpp -o blastdbcheck.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastdbcheck.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o blastdbcheck
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdbcheck /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blastdbcheck /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/blastdbcheck
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
cd app/blastdb/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=makeblastdb LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blastdb TMPL=makeblastdb -w -j --jobserver-fds=3,4 all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blastdb/blastdbcp.cpp -o blastdbcp.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastdbcp.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lwritedb -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lxser -lxcgi -lxhtml -lxconnect -lxutil -lxncbi -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o blastdbcp
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdbcp /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blastdbcp /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/blastdbcp
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
cd app/blastdb/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=makeprofiledb LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blastdb TMPL=makeprofiledb -w -j --jobserver-fds=3,4 all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blastdb/blastdbcmd.cpp -o blastdbcmd.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastdbcmd.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o blastdbcmd
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdbcmd /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blastdbcmd /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/blastdbcmd
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
cd app/segmasker/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=segmasker LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/segmasker'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/segmasker TMPL=segmasker -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/version.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/version.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blastdb/makeblastdb.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blastdb/makeprofiledb.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blastdb/convert2blastmask.cpp -o convert2blastmask.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie convert2blastmask.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o convert2blastmask
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f convert2blastmask /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f convert2blastmask /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/convert2blastmask
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/segmasker/segmasker.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/build_db.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blastdb/masked_range_set.hpp:33,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blastdb/masked_range_set.cpp:31:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/version.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/algo/blast/api/version.hpp:38,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blastdb/makeblastdb.cpp:36:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/segmasker/segmasker.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blastdb/makeblastdb.cpp: In member function 'void CMakeBlastDBApp::x_BuildDatabase()':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blastdb/makeblastdb.cpp:1126:15: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (bytes >= (1L << 31)) {
~~~~~~^~~~~~~~~~~~~
cd algo/blast/blastinput/unit_test/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=blastinput_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput/unit_test'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/unit_test TMPL=blastinput_unit_test -w -j --jobserver-fds=3,4 all
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/segmasker'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/segmasker/segmasker.cpp -o segmasker.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie segmasker.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lxobjsimple -lxalgosegmask -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -ldl -lm -lpthread -o segmasker
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f segmasker /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f segmasker /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/segmasker
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/segmasker'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/segmasker'
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/unit_test/blast_scope_src_unit_test.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp:34:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blastdb/makeprofiledb.cpp -o makeprofiledb.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie makeprofiledb.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lwritedb -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o makeprofiledb
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f makeprofiledb /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f makeprofiledb /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/makeprofiledb
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=bl2seq_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=bl2seq_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/unit_test/blast_scope_src_unit_test.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/bl2seq_unit_test.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blastdb/makeblastdb.cpp -o makeblastdb.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/app/blastdb/masked_range_set.cpp -o masked_range_set.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie makeblastdb.o masked_range_set.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lwritedb -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o makeblastdb
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f makeblastdb /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f makeblastdb /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/makeblastdb
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 APP_PROJ=blast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=blast_unit_test -w -j --jobserver-fds=3,4 all
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_unit_test.cpp:39:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static TNumeric ncbi::NStr::StringToNumeric(ncbi::CTempString, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4522:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In static member function 'static bool ncbi::NStr::StringToNumeric(ncbi::CTempString, TNumeric*, ncbi::NStr::TStringToNumFlags, int) [with TNumeric = wchar_t; ncbi::NStr::TStringToNumFlags = int]':
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:11: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:4549:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if (n < numeric_limits<wchar_t>::min() || n > numeric_limits<wchar_t>::max()) {
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38:0,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44,
from /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/bl2seq_unit_test.cpp:35:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp: At global scope:
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated]
# define THROWS(x) throw x
^
/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro 'THROWS'
static CRef<CDate> DateFromCollectionDate (const string& str) THROWS((CException));
^
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_unit_test.cpp -o blast_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blast_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o blast_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blast_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/blast_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/bl2seq_unit_test.cpp -o bl2seq_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie bl2seq_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o bl2seq_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f bl2seq_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f bl2seq_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/bl2seq_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
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make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput/unit_test'
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp -o blastinput_unit_test.o
/usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/unit_test/blast_scope_src_unit_test.cpp -o blast_scope_src_unit_test.o
/usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastinput_unit_test.o blast_scope_src_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lentrez2cli -lentrez2 -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o blastinput_unit_test
/bin/bash /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastinput_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin
/bin/ln -f blastinput_unit_test /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/bin/blastinput_unit_test
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput/unit_test'
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make[1]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1'
debian/rules override_dh_auto_test
make[1]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1'
dh_auto_test
cd c\+\+ && /usr/bin/make -j1 check VERBOSE=1
make[2]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++'
if test -s ""; then \
cd /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build && /usr/bin/make -w check_p RUN_CHECK=Y; \
else \
cd /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build && /usr/bin/make -w check_r RUN_CHECK=Y; \
fi
make[3]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build'
======================================================================
make[4]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build'
/usr/bin/make -C corelib -w check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
/bin/echo 'Warning: non-existent sub-project "test"'
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make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/corelib'
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make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util'
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make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/regexp'
NOTE: Skipping project regexp due to unmet requirements:
LocalPCRE
make[7]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/regexp'
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make[8]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/regexp'
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/usr/bin/make -C xregexp -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
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make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp'
/usr/bin/make -C compress -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress'
/usr/bin/make -C bzip2 -w check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/bzip2'
NOTE: Skipping project bzip2 due to unmet requirements:
LocalBZ2
make[8]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/bzip2'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/compress/bzip2 TMPL=bzip2 -w mark-as-disabled
make[9]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/bzip2'
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/usr/bin/make -C zlib -w check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/zlib'
NOTE: Skipping project zlib due to unmet requirements:
LocalZ
make[8]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/zlib'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/util/compress/zlib TMPL=zlib -w mark-as-disabled
make[9]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/zlib'
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/usr/bin/make -C api -w check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api'
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make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables'
/bin/echo 'Warning: non-existent sub-project "test"'
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make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables'
/usr/bin/make -C creaders -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders'
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/usr/bin/make -C sequtil -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil'
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/usr/bin/make -C bitset -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/bitset'
/bin/echo 'Warning: non-existent sub-project "test"'
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make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util/bitset'
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make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/util'
/usr/bin/make -C connect -w check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
/usr/bin/make -C services -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/connect/services'
/bin/echo 'Warning: non-existent sub-project "test"'
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make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/connect/services'
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/bin/echo 'Warning: non-existent sub-project "test"'
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make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/connect'
/usr/bin/make -C cgi -w check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/cgi'
/bin/echo 'Warning: non-existent sub-project "test"'
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make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/cgi'
/usr/bin/make -C html -w check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/html'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
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make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/html'
/usr/bin/make -C build-system -w check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/build-system'
/usr/bin/make -C helpers -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/helpers'
SKIP -- build-system/helpers/run_with_lock
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/helpers'
/usr/bin/make -C project_tree_builder -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/project_tree_builder'
SKIP -- build-system/project_tree_builder/project_tree_builder
/usr/bin/make -C msbuild -w check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/project_tree_builder/msbuild'
NOTE: Skipping project msbuild due to unmet requirements:
MSWin
make[8]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/project_tree_builder/msbuild'
/usr/bin/make -f /build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msbuild TMPL=msbuild_dataobj -w mark-as-disabled
make[9]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/project_tree_builder/msbuild'
make[9]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/project_tree_builder/msbuild'
make[8]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/project_tree_builder/msbuild'
make[7]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/project_tree_builder/msbuild'
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/project_tree_builder'
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/build-system'
/usr/bin/make -C serial -w check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/serial'
/usr/bin/make -C datatool -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/serial/datatool'
TEST -- serial/datatool/datatool
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/serial/datatool'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
/bin/echo 'Warning: non-existent sub-project "soap"'
Warning: non-existent sub-project "soap"
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/serial'
/usr/bin/make -C db -w check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/db'
/usr/bin/make -C sqlite -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/db/sqlite'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/db/sqlite'
/bin/echo 'Warning: non-existent sub-project "bdb"'
Warning: non-existent sub-project "bdb"
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/db'
/bin/echo 'Warning: non-existent sub-project "dbapi"'
Warning: non-existent sub-project "dbapi"
/usr/bin/make -C objects -w check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects'
/usr/bin/make -C general -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
/bin/echo 'Warning: non-existent sub-project "unit_test"'
Warning: non-existent sub-project "unit_test"
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general'
/usr/bin/make -C biblio -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio'
/usr/bin/make -C medline -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline'
/usr/bin/make -C pub -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub'
/usr/bin/make -C seqcode -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode'
/usr/bin/make -C seq -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
/bin/echo 'Warning: non-existent sub-project "unit_test"'
Warning: non-existent sub-project "unit_test"
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq'
/usr/bin/make -C seqset -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset'
/usr/bin/make -C submit -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit'
/usr/bin/make -C seqedit -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit'
/usr/bin/make -C seqsplit -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit'
/usr/bin/make -C id1 -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1'
/usr/bin/make -C id2 -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2'
/usr/bin/make -C entrez2 -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
/bin/echo 'Warning: non-existent sub-project "demo"'
Warning: non-existent sub-project "demo"
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2'
/usr/bin/make -C pubmed -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed'
/usr/bin/make -C medlars -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars'
/usr/bin/make -C mla -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla'
/usr/bin/make -C proj -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/proj'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/proj'
/usr/bin/make -C scoremat -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat'
/usr/bin/make -C blast -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast'
/usr/bin/make -C blastdb -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb'
/usr/bin/make -C blastxml -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml'
/usr/bin/make -C blastxml2 -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2'
/usr/bin/make -C mmdb -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mmdb'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mmdb'
/usr/bin/make -C cn3d -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/cn3d'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/cn3d'
/usr/bin/make -C cdd -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/cdd'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/cdd'
/usr/bin/make -C ncbimime -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/ncbimime'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/ncbimime'
/usr/bin/make -C pcsubstance -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pcsubstance'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pcsubstance'
/usr/bin/make -C pcassay -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pcassay'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pcassay'
/usr/bin/make -C gbseq -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq'
/usr/bin/make -C insdseq -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/insdseq'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/insdseq'
/usr/bin/make -C tinyseq -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/tinyseq'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/tinyseq'
/usr/bin/make -C biotree -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biotree'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biotree'
/usr/bin/make -C entrezgene -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrezgene'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrezgene'
/usr/bin/make -C omssa -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/omssa'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/omssa'
/usr/bin/make -C remap -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/remap'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/remap'
/usr/bin/make -C seqtest -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqtest'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqtest'
/usr/bin/make -C taxon1 -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1'
/usr/bin/make -C taxon3 -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3'
/usr/bin/make -C gbproj -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbproj'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbproj'
/usr/bin/make -C trackmgr -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/trackmgr'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/trackmgr'
/usr/bin/make -C valerr -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valerr'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valerr'
/usr/bin/make -C valid -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid'
/usr/bin/make -C access -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/access'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/access'
/usr/bin/make -C docsum -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/docsum'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/docsum'
/usr/bin/make -C featdef -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/featdef'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/featdef'
/usr/bin/make -C genomecoll -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll'
/usr/bin/make -C gc_cli -w check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll/gc_cli'
TEST -- objects/genomecoll/gc_cli/gc_cli
make[7]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll/gc_cli'
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll'
/usr/bin/make -C homologene -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/homologene'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/homologene'
/usr/bin/make -C mim -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mim'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mim'
/usr/bin/make -C objprt -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/objprt'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/objprt'
/usr/bin/make -C variation -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation'
/usr/bin/make -C macro -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/macro'
/bin/echo 'Warning: non-existent sub-project "unit_test"'
Warning: non-existent sub-project "unit_test"
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/macro'
/usr/bin/make -C genesbyloc -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genesbyloc'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genesbyloc'
/usr/bin/make -C coords -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/coords'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/coords'
/usr/bin/make -C varrep -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/varrep'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects/varrep'
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objects'
/usr/bin/make -C objmgr -w check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
/usr/bin/make -C util -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util'
/bin/echo 'Warning: non-existent sub-project "unit_test"'
Warning: non-existent sub-project "unit_test"
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util'
/usr/bin/make -C split -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split'
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr'
/usr/bin/make -C objtools -w check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools'
/bin/echo 'Warning: non-existent sub-project "unit_test_util"'
Warning: non-existent sub-project "unit_test_util"
/usr/bin/make -C readers -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers'
/bin/echo 'Warning: non-existent sub-project "app"'
Warning: non-existent sub-project "app"
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
/bin/echo 'Warning: non-existent sub-project "unit_test"'
Warning: non-existent sub-project "unit_test"
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers'
/usr/bin/make -C blast -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast'
/usr/bin/make -C seqdb_reader -w check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader'
/usr/bin/make -C demo -w check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/demo'
SKIP -- objtools/blast/seqdb_reader/demo/seqdb_demo
make[8]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/demo'
/usr/bin/make -C test -w check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/test'
TEST -- objtools/blast/seqdb_reader/test/seqdb_perf
make[8]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/test'
make[7]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader'
/usr/bin/make -C seqdb_writer -w check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer'
/usr/bin/make -C unit_test -w check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test'
TEST -- objtools/blast/seqdb_writer/unit_test/writedb_unit_test
make[8]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test'
make[7]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer'
/usr/bin/make -C gene_info_reader -w check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader'
/usr/bin/make -C demo -w check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/demo'
SKIP -- objtools/blast/gene_info_reader/demo/gene_info_reader
make[8]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/demo'
/usr/bin/make -C unit_test -w check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test'
TEST -- objtools/blast/gene_info_reader/unit_test/gene_info_unit_test
make[8]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test'
make[7]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader'
/bin/echo 'Warning: non-existent sub-project "gene_info_writer"'
Warning: non-existent sub-project "gene_info_writer"
/usr/bin/make -C services -w check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services'
/usr/bin/make -C unit_test -w check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services/unit_test'
SKIP -- objtools/blast/services/unit_test/blast_services_unit_test
make[8]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services/unit_test'
make[7]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services'
/usr/bin/make -C blastdb_format -w check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format'
/usr/bin/make -C unit_test -w check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format/unit_test'
TEST -- objtools/blast/blastdb_format/unit_test/blastdb_format_unit_test
make[8]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format/unit_test'
make[7]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format'
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast'
/bin/echo 'Warning: non-existent sub-project "lds2"'
Warning: non-existent sub-project "lds2"
/usr/bin/make -C data_loaders -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders'
/usr/bin/make -C genbank -w check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
/usr/bin/make -C cache -w check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache'
make[8]: Nothing to be done for 'check_add_r'.
make[8]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache'
/bin/echo 'Warning: non-existent sub-project "pubseq"'
Warning: non-existent sub-project "pubseq"
/usr/bin/make -C id2 -w check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2'
make[8]: Nothing to be done for 'check_add_r'.
make[8]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2'
/usr/bin/make -C id1 -w check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1'
make[8]: Nothing to be done for 'check_add_r'.
make[8]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1'
/bin/echo 'Warning: non-existent sub-project "pubseq2"'
Warning: non-existent sub-project "pubseq2"
/usr/bin/make -C gicache -w check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/gicache'
make[8]: Nothing to be done for 'check_add_r'.
make[8]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/gicache'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
make[7]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank'
/bin/echo 'Warning: non-existent sub-project "lds2"'
Warning: non-existent sub-project "lds2"
/usr/bin/make -C blastdb -w check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
/bin/echo 'Warning: non-existent sub-project "unit_test"'
Warning: non-existent sub-project "unit_test"
make[7]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb'
/bin/echo 'Warning: non-existent sub-project "patcher"'
Warning: non-existent sub-project "patcher"
/bin/echo 'Warning: non-existent sub-project "asn_cache"'
Warning: non-existent sub-project "asn_cache"
/bin/echo 'Warning: non-existent sub-project "cdd"'
Warning: non-existent sub-project "cdd"
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders'
/usr/bin/make -C simple -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple'
/usr/bin/make -C alnmgr -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr'
/bin/echo 'Warning: non-existent sub-project "demo"'
Warning: non-existent sub-project "demo"
/bin/echo 'Warning: non-existent sub-project "unit_test"'
Warning: non-existent sub-project "unit_test"
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr'
/bin/echo 'Warning: non-existent sub-project "cddalignview"'
Warning: non-existent sub-project "cddalignview"
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
/bin/echo 'Warning: non-existent sub-project "manip"'
Warning: non-existent sub-project "manip"
/usr/bin/make -C cleanup -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup'
/bin/echo 'Warning: non-existent sub-project "test"'
Warning: non-existent sub-project "test"
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup'
/usr/bin/make -C format -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format'
/usr/bin/make -C edit -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/edit'
/bin/echo 'Warning: non-existent sub-project "protein_match"'
Warning: non-existent sub-project "protein_match"
/bin/echo 'Warning: non-existent sub-project "demo"'
Warning: non-existent sub-project "demo"
/bin/echo 'Warning: non-existent sub-project "unit_test"'
Warning: non-existent sub-project "unit_test"
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/edit'
/bin/echo 'Warning: non-existent sub-project "validator"'
Warning: non-existent sub-project "validator"
/bin/echo 'Warning: non-existent sub-project "asniotest"'
Warning: non-existent sub-project "asniotest"
/bin/echo 'Warning: non-existent sub-project "align"'
Warning: non-existent sub-project "align"
/usr/bin/make -C seqmasks_io -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io'
/bin/echo 'Warning: non-existent sub-project "unit_test"'
Warning: non-existent sub-project "unit_test"
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io'
/bin/echo 'Warning: non-existent sub-project "eutils"'
Warning: non-existent sub-project "eutils"
/usr/bin/make -C align_format -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format'
/usr/bin/make -C unit_test -w check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format/unit_test'
TEST -- objtools/align_format/unit_test/align_format_unit_test
make[7]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format/unit_test'
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format'
/bin/echo 'Warning: non-existent sub-project "snputil"'
Warning: non-existent sub-project "snputil"
/bin/echo 'Warning: non-existent sub-project "uudutil"'
Warning: non-existent sub-project "uudutil"
/bin/echo 'Warning: non-existent sub-project "variation"'
Warning: non-existent sub-project "variation"
/bin/echo 'Warning: non-existent sub-project "writers"'
Warning: non-existent sub-project "writers"
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/objtools'
/bin/echo 'Warning: non-existent sub-project "ctools"'
Warning: non-existent sub-project "ctools"
/bin/echo 'Warning: non-existent sub-project "sra"'
Warning: non-existent sub-project "sra"
/usr/bin/make -C algo -w check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo'
/usr/bin/make -C dustmask -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask'
/usr/bin/make -C winmask -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask'
/bin/echo 'Warning: non-existent sub-project "sequence"'
Warning: non-existent sub-project "sequence"
/usr/bin/make -C blast -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast'
/usr/bin/make -C composition_adjustment -w check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment'
make[7]: Nothing to be done for 'check_add_r'.
make[7]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment'
/usr/bin/make -C core -w check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core'
make[7]: Nothing to be done for 'check_add_r'.
make[7]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core'
/usr/bin/make -C dbindex -w check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex'
/usr/bin/make -C makeindex -w check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex/makeindex'
SKIP -- algo/blast/dbindex/makeindex/makeindex
make[8]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex/makeindex'
make[7]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex'
/bin/echo 'Warning: non-existent sub-project "dbindex_search"'
Warning: non-existent sub-project "dbindex_search"
/usr/bin/make -C api -w check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api'
make[7]: Nothing to be done for 'check_add_r'.
make[7]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api'
/usr/bin/make -C proteinkmer -w check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer'
/usr/bin/make -C unit_test -w check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer/unit_test'
TEST -- algo/blast/proteinkmer/unit_test/proteinkmer_unit_test
make[8]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer/unit_test'
make[7]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer'
/usr/bin/make -C format -w check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format'
make[7]: Nothing to be done for 'check_add_r'.
make[7]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format'
/usr/bin/make -C blastinput -w check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput'
/usr/bin/make -C unit_test -w check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput/unit_test'
TEST -- algo/blast/blastinput/unit_test/blastinput_unit_test
make[8]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput/unit_test'
/bin/echo 'Warning: non-existent sub-project "demo"'
Warning: non-existent sub-project "demo"
make[7]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput'
/bin/echo 'Warning: non-existent sub-project "blast_sra_input"'
Warning: non-existent sub-project "blast_sra_input"
/usr/bin/make -C igblast -w check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast'
make[7]: Nothing to be done for 'check_add_r'.
make[7]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast'
/bin/echo 'Warning: non-existent sub-project "gumbel_params"'
Warning: non-existent sub-project "gumbel_params"
/usr/bin/make -C unit_tests -w check_add_r || exit 5
make[7]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests'
/usr/bin/make -C blast_format -w check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blast_format'
TEST -- algo/blast/unit_tests/blast_format/blast_format_unit_test
make[8]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blast_format'
/usr/bin/make -C blastdb -w check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blastdb'
TEST -- algo/blast/unit_tests/blastdb/bdbloader_unit_test
make[8]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blastdb'
/usr/bin/make -C seqdb_reader -w check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader'
TEST -- algo/blast/unit_tests/seqdb_reader/seqdb_unit_test
make[8]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader'
/usr/bin/make -C api -w check_add_r || exit 5
make[8]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
TEST -- algo/blast/unit_tests/api/blast_unit_test
TEST -- algo/blast/unit_tests/api/aalookup_unit_test
TEST -- algo/blast/unit_tests/api/seqsrc_unit_test
TEST -- algo/blast/unit_tests/api/delta_unit_test
TEST -- algo/blast/unit_tests/api/ntlookup_unit_test
TEST -- algo/blast/unit_tests/api/seqinfosrc_unit_test
TEST -- algo/blast/unit_tests/api/setupfactory_unit_test
TEST -- algo/blast/unit_tests/api/search_strategy_unit_test
TEST -- algo/blast/unit_tests/api/redoalignment_unit_test
TEST -- algo/blast/unit_tests/api/queryinfo_unit_test
TEST -- algo/blast/unit_tests/api/querydata_unit_test
TEST -- algo/blast/unit_tests/api/pssmenginefreqratios_unit_test
TEST -- algo/blast/unit_tests/api/blastsetup_unit_test
TEST -- algo/blast/unit_tests/api/blastextend_unit_test
TEST -- algo/blast/unit_tests/api/blastdiag_unit_test
TEST -- algo/blast/unit_tests/api/pssmcreate_unit_test
TEST -- algo/blast/unit_tests/api/psiblast_iteration_unit_test
TEST -- algo/blast/unit_tests/api/hspfilter_besthit_unit_test
TEST -- algo/blast/unit_tests/api/hspfilter_culling_unit_test
TEST -- algo/blast/unit_tests/api/optionshandle_unit_test
TEST -- algo/blast/unit_tests/api/msa2pssm_unit_test
TEST -- algo/blast/unit_tests/api/tracebacksearch_unit_test
TEST -- algo/blast/unit_tests/api/traceback_unit_test
TEST -- algo/blast/unit_tests/api/psibl2seq_unit_test
TEST -- algo/blast/unit_tests/api/psiblast_unit_test
TEST -- algo/blast/unit_tests/api/prelimsearch_unit_test
TEST -- algo/blast/unit_tests/api/phiblast_unit_test
TEST -- algo/blast/unit_tests/api/split_query_unit_test
TEST -- algo/blast/unit_tests/api/scoreblk_unit_test
TEST -- algo/blast/unit_tests/api/hspstream_unit_test
TEST -- algo/blast/unit_tests/api/rps_unit_test
TEST -- algo/blast/unit_tests/api/gapinfo_unit_test
TEST -- algo/blast/unit_tests/api/blasthits_unit_test
TEST -- algo/blast/unit_tests/api/linkhsp_unit_test
TEST -- algo/blast/unit_tests/api/blastengine_unit_test
TEST -- algo/blast/unit_tests/api/subj_ranges_unit_test
TEST -- algo/blast/unit_tests/api/version_reference_unit_test
TEST -- algo/blast/unit_tests/api/ntscan_unit_test
TEST -- algo/blast/unit_tests/api/aascan_unit_test
TEST -- algo/blast/unit_tests/api/remote_blast_unit_test
TEST -- algo/blast/unit_tests/api/uniform_search_unit_test
TEST -- algo/blast/unit_tests/api/blastfilter_unit_test
TEST -- algo/blast/unit_tests/api/blastoptions_unit_test
TEST -- algo/blast/unit_tests/api/gencode_singleton_unit_test
TEST -- algo/blast/unit_tests/api/bl2seq_unit_test
TEST -- algo/blast/unit_tests/api/stat_unit_test
TEST -- algo/blast/unit_tests/api/magicblast_unit_test
make[8]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api'
make[7]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests'
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast'
/usr/bin/make -C segmask -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask'
/bin/echo 'Warning: non-existent sub-project "align"'
Warning: non-existent sub-project "align"
/bin/echo 'Warning: non-existent sub-project "structure"'
Warning: non-existent sub-project "structure"
/bin/echo 'Warning: non-existent sub-project "ms"'
Warning: non-existent sub-project "ms"
/bin/echo 'Warning: non-existent sub-project "gnomon"'
Warning: non-existent sub-project "gnomon"
/bin/echo 'Warning: non-existent sub-project "tree"'
Warning: non-existent sub-project "tree"
/bin/echo 'Warning: non-existent sub-project "phy_tree"'
Warning: non-existent sub-project "phy_tree"
/bin/echo 'Warning: non-existent sub-project "seqqa"'
Warning: non-existent sub-project "seqqa"
/bin/echo 'Warning: non-existent sub-project "cobalt"'
Warning: non-existent sub-project "cobalt"
/bin/echo 'Warning: non-existent sub-project "text"'
Warning: non-existent sub-project "text"
/bin/echo 'Warning: non-existent sub-project "volume_merge"'
Warning: non-existent sub-project "volume_merge"
/bin/echo 'Warning: non-existent sub-project "primer"'
Warning: non-existent sub-project "primer"
/bin/echo 'Warning: non-existent sub-project "id_mapper"'
Warning: non-existent sub-project "id_mapper"
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/algo'
/usr/bin/make -C misc -w check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/misc'
/usr/bin/make -C third_party -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/misc/third_party'
make[6]: Nothing to be done for 'check_add_r'.
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/misc/third_party'
/usr/bin/make -C third_party_static -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/misc/third_party_static'
NOTE: Skipping project third_party_static due to unmet requirements:
-DLL
make[7]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/misc/third_party_static'
make[7]: Nothing to be done for 'mark-as-disabled_r'.
make[7]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/misc/third_party_static'
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/misc/third_party_static'
/bin/echo 'Warning: non-existent sub-project "clog"'
Warning: non-existent sub-project "clog"
/bin/echo 'Warning: non-existent sub-project "grid_cgi"'
Warning: non-existent sub-project "grid_cgi"
/bin/echo 'Warning: non-existent sub-project "xmlwrapp"'
Warning: non-existent sub-project "xmlwrapp"
/bin/echo 'Warning: non-existent sub-project "eutils_client"'
Warning: non-existent sub-project "eutils_client"
/bin/echo 'Warning: non-existent sub-project "hydra_client"'
Warning: non-existent sub-project "hydra_client"
/bin/echo 'Warning: non-existent sub-project "discrepancy"'
Warning: non-existent sub-project "discrepancy"
/bin/echo 'Warning: non-existent sub-project "xmlreaders"'
Warning: non-existent sub-project "xmlreaders"
/bin/echo 'Warning: non-existent sub-project "hgvs"'
Warning: non-existent sub-project "hgvs"
/bin/echo 'Warning: non-existent sub-project "netstorage"'
Warning: non-existent sub-project "netstorage"
/bin/echo 'Warning: non-existent sub-project "jsonwrapp"'
Warning: non-existent sub-project "jsonwrapp"
/bin/echo 'Warning: non-existent sub-project "biosample_util"'
Warning: non-existent sub-project "biosample_util"
/bin/echo 'Warning: non-existent sub-project "data_loaders_util"'
Warning: non-existent sub-project "data_loaders_util"
/bin/echo 'Warning: non-existent sub-project "lapackwrapp"'
Warning: non-existent sub-project "lapackwrapp"
/bin/echo 'Warning: non-existent sub-project "pmcidconv_client"'
Warning: non-existent sub-project "pmcidconv_client"
/bin/echo 'Warning: non-existent sub-project "grpc_integration"'
Warning: non-existent sub-project "grpc_integration"
/bin/echo 'Warning: non-existent sub-project "cgi_redirect"'
Warning: non-existent sub-project "cgi_redirect"
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/misc'
/bin/echo 'Warning: non-existent sub-project "gui"'
Warning: non-existent sub-project "gui"
/usr/bin/make -C app -w check_add_r || exit 5
make[5]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app'
/bin/echo 'Warning: non-existent sub-project "asn2asn"'
Warning: non-existent sub-project "asn2asn"
/bin/echo 'Warning: non-existent sub-project "asn2fasta"'
Warning: non-existent sub-project "asn2fasta"
/bin/echo 'Warning: non-existent sub-project "asn2flat"'
Warning: non-existent sub-project "asn2flat"
/bin/echo 'Warning: non-existent sub-project "asnval"'
Warning: non-existent sub-project "asnval"
/bin/echo 'Warning: non-existent sub-project "asn_cleanup"'
Warning: non-existent sub-project "asn_cleanup"
/bin/echo 'Warning: non-existent sub-project "id1_fetch"'
Warning: non-existent sub-project "id1_fetch"
/usr/bin/make -C blast -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
SKIP -- app/blast/blastp
SKIP -- app/blast/blastn
SKIP -- app/blast/blastx
SKIP -- app/blast/tblastn
SKIP -- app/blast/tblastx
SKIP -- app/blast/psiblast
SKIP -- app/blast/rpsblast
SKIP -- app/blast/rpstblastn
SKIP -- app/blast/blast_formatter
SKIP -- app/blast/deltablast
SKIP -- app/blast/seedtop
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast'
/bin/echo 'Warning: non-existent sub-project "convert_seq"'
Warning: non-existent sub-project "convert_seq"
/bin/echo 'Warning: non-existent sub-project "nmer_repeats"'
Warning: non-existent sub-project "nmer_repeats"
/bin/echo 'Warning: non-existent sub-project "objmgr"'
Warning: non-existent sub-project "objmgr"
/bin/echo 'Warning: non-existent sub-project "gi2taxid"'
Warning: non-existent sub-project "gi2taxid"
/bin/echo 'Warning: non-existent sub-project "netschedule"'
Warning: non-existent sub-project "netschedule"
/bin/echo 'Warning: non-existent sub-project "grid"'
Warning: non-existent sub-project "grid"
/bin/echo 'Warning: non-existent sub-project "netstorage"'
Warning: non-existent sub-project "netstorage"
/bin/echo 'Warning: non-existent sub-project "igblast"'
Warning: non-existent sub-project "igblast"
/usr/bin/make -C winmasker -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
SKIP -- app/winmasker/winmasker
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker'
/usr/bin/make -C dustmasker -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/dustmasker'
SKIP -- app/dustmasker/dustmasker
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/dustmasker'
/usr/bin/make -C segmasker -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/segmasker'
SKIP -- app/segmasker/segmasker
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/segmasker'
/usr/bin/make -C blastdb -w check_add_r || exit 5
make[6]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
SKIP -- app/blastdb/blastdbcmd
SKIP -- app/blastdb/makeblastdb
SKIP -- app/blastdb/blastdb_aliastool
SKIP -- app/blastdb/blastdbcheck
SKIP -- app/blastdb/convert2blastmask
SKIP -- app/blastdb/blastdbcp
SKIP -- app/blastdb/makeprofiledb
make[6]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb'
/bin/echo 'Warning: non-existent sub-project "vecscreen"'
Warning: non-existent sub-project "vecscreen"
/bin/echo 'Warning: non-existent sub-project "agpconvert"'
Warning: non-existent sub-project "agpconvert"
/bin/echo 'Warning: non-existent sub-project "id2_fetch"'
Warning: non-existent sub-project "id2_fetch"
/bin/echo 'Warning: non-existent sub-project "agp_validate"'
Warning: non-existent sub-project "agp_validate"
/bin/echo 'Warning: non-existent sub-project "objextract"'
Warning: non-existent sub-project "objextract"
/bin/echo 'Warning: non-existent sub-project "bdb_env_keeper"'
Warning: non-existent sub-project "bdb_env_keeper"
/bin/echo 'Warning: non-existent sub-project "nw_aligner"'
Warning: non-existent sub-project "nw_aligner"
/bin/echo 'Warning: non-existent sub-project "speedtest"'
Warning: non-existent sub-project "speedtest"
/bin/echo 'Warning: non-existent sub-project "idmapper"'
Warning: non-existent sub-project "idmapper"
/bin/echo 'Warning: non-existent sub-project "formatguess"'
Warning: non-existent sub-project "formatguess"
/bin/echo 'Warning: non-existent sub-project "multireader"'
Warning: non-existent sub-project "multireader"
/bin/echo 'Warning: non-existent sub-project "read_blast_result"'
Warning: non-existent sub-project "read_blast_result"
/bin/echo 'Warning: non-existent sub-project "splign"'
Warning: non-existent sub-project "splign"
/bin/echo 'Warning: non-existent sub-project "hfilter"'
Warning: non-existent sub-project "hfilter"
/bin/echo 'Warning: non-existent sub-project "annotwriter"'
Warning: non-existent sub-project "annotwriter"
/bin/echo 'Warning: non-existent sub-project "compart"'
Warning: non-existent sub-project "compart"
/bin/echo 'Warning: non-existent sub-project "streamtest"'
Warning: non-existent sub-project "streamtest"
/bin/echo 'Warning: non-existent sub-project "lds2_indexer"'
Warning: non-existent sub-project "lds2_indexer"
/bin/echo 'Warning: non-existent sub-project "discrepancy_report"'
Warning: non-existent sub-project "discrepancy_report"
/bin/echo 'Warning: non-existent sub-project "biosample_chk"'
Warning: non-existent sub-project "biosample_chk"
/bin/echo 'Warning: non-existent sub-project "gap_stats"'
Warning: non-existent sub-project "gap_stats"
/bin/echo 'Warning: non-existent sub-project "table2asn"'
Warning: non-existent sub-project "table2asn"
/bin/echo 'Warning: non-existent sub-project "srcchk"'
Warning: non-existent sub-project "srcchk"
/bin/echo 'Warning: non-existent sub-project "tableval"'
Warning: non-existent sub-project "tableval"
/bin/echo 'Warning: non-existent sub-project "ncbi_encrypt"'
Warning: non-existent sub-project "ncbi_encrypt"
/bin/echo 'Warning: non-existent sub-project "ssub_fork"'
Warning: non-existent sub-project "ssub_fork"
/bin/echo 'Warning: non-existent sub-project "asn_cache"'
Warning: non-existent sub-project "asn_cache"
/bin/echo 'Warning: non-existent sub-project "magicblast"'
Warning: non-existent sub-project "magicblast"
/bin/echo 'Warning: non-existent sub-project "pub_report"'
Warning: non-existent sub-project "pub_report"
/bin/echo 'Warning: non-existent sub-project "prot_match"'
Warning: non-existent sub-project "prot_match"
/bin/echo 'Warning: non-existent sub-project "gff_deconcat"'
Warning: non-existent sub-project "gff_deconcat"
/bin/echo 'Warning: non-existent sub-project "sub_fuse"'
Warning: non-existent sub-project "sub_fuse"
/bin/echo 'Warning: non-existent sub-project "split_cache"'
Warning: non-existent sub-project "split_cache"
/bin/echo 'Warning: non-existent sub-project "wig2table"'
Warning: non-existent sub-project "wig2table"
/bin/echo 'Warning: non-existent sub-project "netcache"'
Warning: non-existent sub-project "netcache"
/bin/echo 'Warning: non-existent sub-project "rmblastn"'
Warning: non-existent sub-project "rmblastn"
/bin/echo 'Warning: non-existent sub-project "dblb"'
Warning: non-existent sub-project "dblb"
/bin/echo 'Warning: non-existent sub-project "tls"'
Warning: non-existent sub-project "tls"
/bin/echo 'Warning: non-existent sub-project "idfetch"'
Warning: non-existent sub-project "idfetch"
make[5]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build/app'
/bin/echo 'Warning: non-existent sub-project "sample"'
Warning: non-existent sub-project "sample"
/bin/echo 'Warning: non-existent sub-project "internal"'
Warning: non-existent sub-project "internal"
make[4]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build'
----------------------------------------------------------------------
Building check script...
SKIP -- objtools/blast/seqdb_reader/test/seqdb_perf (unmet CHECK_REQUIRES)
SKIP -- objtools/blast/seqdb_reader/test/seqdb_perf (unmet CHECK_REQUIRES)
SKIP -- objtools/blast/seqdb_reader/test/seqdb_perf (unmet CHECK_REQUIRES)
SKIP -- objtools/blast/seqdb_writer/unit_test/writedb_unit_test (unmet CHECK_REQUIRES)
SKIP -- objtools/blast/blastdb_format/unit_test/blastdb_format_unit_test (unmet CHECK_REQUIRES)
SKIP -- objtools/align_format/unit_test/align_format_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/blastinput/unit_test/blastinput_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/blast_format/blast_format_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/blastdb/bdbloader_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/seqdb_reader/seqdb_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/blast_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/aalookup_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/seqsrc_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/delta_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/ntlookup_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/seqinfosrc_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/setupfactory_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/search_strategy_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/redoalignment_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/queryinfo_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/querydata_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/pssmenginefreqratios_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/blastsetup_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/blastextend_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/pssmcreate_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/psiblast_iteration_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/hspfilter_besthit_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/hspfilter_culling_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/optionshandle_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/msa2pssm_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/tracebacksearch_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/traceback_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/psibl2seq_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/psiblast_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/prelimsearch_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/phiblast_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/split_query_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/scoreblk_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/hspstream_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/rps_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/gapinfo_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/blasthits_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/linkhsp_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/blastengine_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/subj_ranges_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/version_reference_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/ntscan_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/remote_blast_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/uniform_search_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/blastfilter_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/blastoptions_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/gencode_singleton_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/bl2seq_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/stat_unit_test (unmet CHECK_REQUIRES)
SKIP -- algo/blast/unit_tests/api/magicblast_unit_test (unmet CHECK_REQUIRES)
Done.
OK -- [serial/datatool] datatool.sh (real 0.56, user 0.31, sys 0.08)
SKP -- [serial/datatool] datatool_xml.sh
ABS -- [objects/genomecoll/gc_cli] test_gencoll_svc_ASSM
ABS -- [objects/genomecoll/gc_cli] test_gencoll_svc_ASSM_BY_SEQ
ABS -- [objects/genomecoll/gc_cli] test_gencoll_svc_TYPELOC
OK -- [objtools/blast/gene_info_reader/unit_test] gene_info_unit_test (real 0.06, user 0.02, sys 0.02)
OK -- [algo/blast/proteinkmer/unit_test] proteinkmer_unit_test (real 15.99, user 10.10, sys 2.73)
OK -- [algo/blast/unit_tests/api] blastdiag_unit_test (real 0.08, user 0.03, sys 0.04)
OK -- [algo/blast/unit_tests/api] aascan_unit_test (real 11.44, user 2.21, sys 7.52)
Succeeded : 5
Timeout : 0
Failed : 0
Absent : 4
******** ALL TESTS COMPLETED SUCCESSFULLY ********
make[3]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++/BUILD/build'
make[2]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1/c++'
c++/BUILD/build/check.sh concat_err
cat c++/BUILD/build/check.sh.out_err
make[1]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1'
fakeroot debian/rules binary-arch
# dh binary-arch -Dc++ --with autotools_dev
dh binary-arch -Dc++
dh_testroot -a -O-Dc\+\+
dh_prep -a -O-Dc\+\+
dh_installdirs -a -O-Dc\+\+
debian/rules override_dh_auto_install-arch
make[1]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1'
# cp c++/BUILD/lib/*.so debian/ncbi-blast+/usr/lib/ncbi-blast+/
cp c++/BUILD/bin/* debian/ncbi-blast+/usr/bin/
make[1]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1'
debian/rules override_dh_install-arch
make[1]: Entering directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1'
# dh_install
mv debian/ncbi-blast+/usr/bin/rpsblast debian/ncbi-blast+/usr/bin/rpsblast+
mv debian/ncbi-blast+/usr/bin/seedtop debian/ncbi-blast+/usr/bin/seedtop+
mv debian/ncbi-blast+/usr/bin/legacy_blast.pl debian/ncbi-blast+/usr/bin/legacy_blast
mv debian/ncbi-blast+/usr/bin/update_blastdb.pl debian/ncbi-blast+/usr/bin/update_blastdb
mv debian/ncbi-blast+/usr/bin/windowmasker_2.2.22_adapter.py \
debian/ncbi-blast+/usr/bin/windowmasker_2.2.22_adapter
rm -f debian/ncbi-blast+/usr/bin/*test* debian/ncbi-blast+/usr/bin/seqdb_demo \
debian/ncbi-blast+/usr/bin/datatool debian/ncbi-blast+/usr/bin/run_with_lock \
debian/ncbi-blast+/usr/bin/project_tree_builder
for x in debian/ncbi-blast+/usr/bin/*; do \
LD_LIBRARY_PATH=c++/BUILD/lib ldd $x; \
done 2>/dev/null | awk '/BUILD/ { print $3 }' | sort -u | \
xargs cp -v -t debian/ncbi-blast+/usr/lib/ncbi-blast+
'c++/BUILD/lib/libalign_format.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libalign_format.so'
'c++/BUILD/lib/libbiblio.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libbiblio.so'
'c++/BUILD/lib/libblast.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libblast.so'
'c++/BUILD/lib/libblast_services.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libblast_services.so'
'c++/BUILD/lib/libblastdb.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libblastdb.so'
'c++/BUILD/lib/libblastdb_format.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libblastdb_format.so'
'c++/BUILD/lib/libblastinput.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libblastinput.so'
'c++/BUILD/lib/libblastxml.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libblastxml.so'
'c++/BUILD/lib/libblastxml2.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libblastxml2.so'
'c++/BUILD/lib/libcomposition_adjustment.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libcomposition_adjustment.so'
'c++/BUILD/lib/libcreaders.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libcreaders.so'
'c++/BUILD/lib/libgbseq.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libgbseq.so'
'c++/BUILD/lib/libgene_info.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libgene_info.so'
'c++/BUILD/lib/libgeneral.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libgeneral.so'
'c++/BUILD/lib/libgenome_collection.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libgenome_collection.so'
'c++/BUILD/lib/libid1.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libid1.so'
'c++/BUILD/lib/libid2.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libid2.so'
'c++/BUILD/lib/libmedlars.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libmedlars.so'
'c++/BUILD/lib/libmedline.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libmedline.so'
'c++/BUILD/lib/libmla.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libmla.so'
'c++/BUILD/lib/libmlacli.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libmlacli.so'
'c++/BUILD/lib/libncbi_xloader_blastdb.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libncbi_xloader_blastdb.so'
'c++/BUILD/lib/libncbi_xloader_blastdb_rmt.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libncbi_xloader_blastdb_rmt.so'
'c++/BUILD/lib/libncbi_xloader_genbank.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libncbi_xloader_genbank.so'
'c++/BUILD/lib/libncbi_xreader.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libncbi_xreader.so'
'c++/BUILD/lib/libncbi_xreader_cache.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libncbi_xreader_cache.so'
'c++/BUILD/lib/libncbi_xreader_id1.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libncbi_xreader_id1.so'
'c++/BUILD/lib/libncbi_xreader_id2.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libncbi_xreader_id2.so'
'c++/BUILD/lib/libpub.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libpub.so'
'c++/BUILD/lib/libpubmed.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libpubmed.so'
'c++/BUILD/lib/libscoremat.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libscoremat.so'
'c++/BUILD/lib/libseq.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libseq.so'
'c++/BUILD/lib/libseqcode.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libseqcode.so'
'c++/BUILD/lib/libseqdb.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libseqdb.so'
'c++/BUILD/lib/libseqedit.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libseqedit.so'
'c++/BUILD/lib/libseqmasks_io.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libseqmasks_io.so'
'c++/BUILD/lib/libseqset.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libseqset.so'
'c++/BUILD/lib/libseqsplit.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libseqsplit.so'
'c++/BUILD/lib/libsequtil.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libsequtil.so'
'c++/BUILD/lib/libsubmit.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libsubmit.so'
'c++/BUILD/lib/libtables.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libtables.so'
'c++/BUILD/lib/libtaxon1.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libtaxon1.so'
'c++/BUILD/lib/libtaxon3.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libtaxon3.so'
'c++/BUILD/lib/libvalid.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libvalid.so'
'c++/BUILD/lib/libwritedb.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libwritedb.so'
'c++/BUILD/lib/libxalgoblastdbindex.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxalgoblastdbindex.so'
'c++/BUILD/lib/libxalgodustmask.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxalgodustmask.so'
'c++/BUILD/lib/libxalgosegmask.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxalgosegmask.so'
'c++/BUILD/lib/libxalgowinmask.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxalgowinmask.so'
'c++/BUILD/lib/libxalnmgr.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxalnmgr.so'
'c++/BUILD/lib/libxblast.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxblast.so'
'c++/BUILD/lib/libxblastformat.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxblastformat.so'
'c++/BUILD/lib/libxcgi.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxcgi.so'
'c++/BUILD/lib/libxcleanup.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxcleanup.so'
'c++/BUILD/lib/libxcompress.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxcompress.so'
'c++/BUILD/lib/libxconnect.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxconnect.so'
'c++/BUILD/lib/libxformat.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxformat.so'
'c++/BUILD/lib/libxhtml.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxhtml.so'
'c++/BUILD/lib/libxncbi.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxncbi.so'
'c++/BUILD/lib/libxnetblast.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxnetblast.so'
'c++/BUILD/lib/libxnetblastcli.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxnetblastcli.so'
'c++/BUILD/lib/libxobjmgr.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxobjmgr.so'
'c++/BUILD/lib/libxobjread.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxobjread.so'
'c++/BUILD/lib/libxobjutil.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxobjutil.so'
'c++/BUILD/lib/libxregexp.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxregexp.so'
'c++/BUILD/lib/libxser.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxser.so'
'c++/BUILD/lib/libxutil.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxutil.so'
make[1]: Leaving directory '/build/ncbi-blast+-aJeFN8/ncbi-blast+-2.7.1'
dh_installdocs -a -O-Dc\+\+
dh_installchangelogs -a -O-Dc\+\+
dh_installexamples -a -O-Dc\+\+
dh_installman -a -O-Dc\+\+
dh_installcatalogs -a -O-Dc\+\+
dh_installcron -a -O-Dc\+\+
dh_installdebconf -a -O-Dc\+\+
dh_installemacsen -a -O-Dc\+\+
dh_installifupdown -a -O-Dc\+\+
dh_installinfo -a -O-Dc\+\+
dh_installinit -a -O-Dc\+\+
dh_installmenu -a -O-Dc\+\+
dh_installmime -a -O-Dc\+\+
dh_installmodules -a -O-Dc\+\+
dh_installlogcheck -a -O-Dc\+\+
dh_installlogrotate -a -O-Dc\+\+
dh_installpam -a -O-Dc\+\+
dh_installppp -a -O-Dc\+\+
dh_installudev -a -O-Dc\+\+
dh_installgsettings -a -O-Dc\+\+
dh_bugfiles -a -O-Dc\+\+
dh_ucf -a -O-Dc\+\+
dh_lintian -a -O-Dc\+\+
dh_gconf -a -O-Dc\+\+
dh_icons -a -O-Dc\+\+
dh_perl -a -O-Dc\+\+
dh_usrlocal -a -O-Dc\+\+
dh_link -a -O-Dc\+\+
dh_installwm -a -O-Dc\+\+
dh_installxfonts -a -O-Dc\+\+
dh_strip_nondeterminism -a -O-Dc\+\+
dh_compress -a -O-Dc\+\+
dh_fixperms -a -O-Dc\+\+
dh_missing -a -O-Dc\+\+
dh_strip -a -O-Dc\+\+
dh_makeshlibs -a -O-Dc\+\+
dh_shlibdeps -a -O-Dc\+\+
dh_installdeb -a -O-Dc\+\+
dh_gencontrol -a -O-Dc\+\+
dh_md5sums -a -O-Dc\+\+
dh_builddeb -a -O-Dc\+\+
dpkg-deb: building package 'ncbi-blast+' in '../ncbi-blast+_2.7.1-1+b1_armhf.deb'.
dpkg-deb: building package 'ncbi-blast+-dbgsym' in '../ncbi-blast+-dbgsym_2.7.1-1+b1_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian mythic lxc autobuilder 1 <root@raspbian.org> >../ncbi-blast+_2.7.1-1+b1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build ncbi-blast+-2.7.1
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2018-02-22T06:33:42Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
ncbi-blast+_2.7.1-1+b1_armhf.changes:
-------------------------------------
Format: 1.8
Date: Sat, 10 Feb 2018 17:35:31 +0000
Source: ncbi-blast+ (2.7.1-1)
Binary: ncbi-blast+ ncbi-blast+-legacy blast2
Binary-Only: yes
Architecture: armhf
Version: 2.7.1-1+b1
Distribution: buster-staging
Urgency: low
Maintainer: Raspbian mythic lxc autobuilder 1 <root@raspbian.org>
Changed-By: Raspbian mythic lxc autobuilder 1 <root@raspbian.org>
Description:
blast2 - transitional dummy package to ncbi-blast+-legacy
ncbi-blast+ - next generation suite of BLAST sequence search tools
ncbi-blast+-legacy - NCBI Blast legacy call script
Changes:
ncbi-blast+ (2.7.1-1+b1) buster-staging; urgency=low, binary-only=yes
.
* Binary-only non-maintainer upload for armhf; no source changes.
* rebuild due to debcheck failure
Checksums-Sha1:
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a1e148e90c4d649233ea2483ed896fefcb70d814 5983 ncbi-blast+_2.7.1-1+b1_armhf.buildinfo
0585515902b0a8a38e9bbb0604eea53c26f3470e 8043024 ncbi-blast+_2.7.1-1+b1_armhf.deb
Checksums-Sha256:
cc4c3c80f5d64560d5ed0ab934dea732bb7d844efd8dc24374ef3da4f61945fc 167228500 ncbi-blast+-dbgsym_2.7.1-1+b1_armhf.deb
73b2df335b2b0c4ca1cbd5cdd8257c2bf1851242e13b4c80858dd247bd528a78 5983 ncbi-blast+_2.7.1-1+b1_armhf.buildinfo
7c4575fdac77d600594bd3a64b9818720d4ad726bc03875d27c2d44d8bb85c92 8043024 ncbi-blast+_2.7.1-1+b1_armhf.deb
Files:
014700fc878c14a4dc066a1c80b9fdf7 167228500 debug optional ncbi-blast+-dbgsym_2.7.1-1+b1_armhf.deb
cd8f5d64b5fe9bec18e904a5be247a4f 5983 science optional ncbi-blast+_2.7.1-1+b1_armhf.buildinfo
f26d9c525b05749c44b7245ff2634db4 8043024 science optional ncbi-blast+_2.7.1-1+b1_armhf.deb
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
ncbi-blast+-dbgsym_2.7.1-1+b1_armhf.deb
---------------------------------------
new Debian package, version 2.0.
size 167228500 bytes: control archive=4560 bytes.
4095 bytes, 12 lines control
9646 bytes, 91 lines md5sums
Package: ncbi-blast+-dbgsym
Source: ncbi-blast+ (2.7.1-1)
Version: 2.7.1-1+b1
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 173335
Depends: ncbi-blast+ (= 2.7.1-1+b1)
Section: debug
Priority: optional
Description: debug symbols for ncbi-blast+
Build-Ids: 005d0a2dd87e57fdcd8acce8296c99407c564328 03a8e55007e33a50eacd41378bd90bf0c8e29328 07fdf61ef2dbdf3f12c754f4ea502fcc88562988 0e2850b11bd569d4e77240f2b93894fc26a8ddb6 0fa0b24cb19ecd3121fc6cd7a0081c392af41583 0fb370a9380cc9b2d30224f6fcab9ffa24568d49 0fe6afdf42da27be374f2692b9ebc4aafdc3e193 12c388c736359961baa972156b6d572a77501dae 12f029fcfa1593019f282a66aa0696ff0f64b968 164a8b199d5ce8f03fe5bbf2faa3d439b508f9cb 266142ee1248040053cc4cc24693ce05ce18c51c 2860ed19ab2987d50117ee7ca9a02f3cc01cfdc6 28ee93e1f565ec72f60e53d9a29853a1f9883a06 29c9e70dd20c0a0b466e2bc9278558f15358a34d 2b32ef54346d6db895460d328a3009a080c0bbde 2fda2502963a72dd69989332ead88170850e9a65 319bb118fa16819c5577ad410f6c602ee934d7fd 331080f7a72937969a6a15f857b3c58fa5ae4d10 342fd2ed9ee368d0234f6b06e18b660a9abb0c3a 3497c0595a0cd5296a79cd57d70861d169d1b236 3bc0dcd403226a78b21a7a2e1f887c074607f1b2 3ce3571de234e06d10ff010acc2f402d1ffc67d5 3dacf07cabc00e946467625aed8d79cf40fcfeb1 407fb000fd954fff0873ac5d581f6540b42cff8e 477e1c1021e42590b25190d87e18f41467e20f05 490813c2bf065091d704f12d711c6e90f4543ef4 4b2c72f1f831a8aac20f66c25d2028f54fa45a1d 51fbe1f15c81022586ead2495a76635f2f279887 525afd0a5152f0559c1ca2a49f6250778098427a 5ae1799292c7bed01dec598f623b2abd26f70475 5bad216ce844f5ac122650e4a4bc881c633ab7ec 5d7df62c90bf513036e89e39f20bcf51592ee73d 60523837f60c60a013439401a41ec1d42ef43982 63bdc98726b98b2c353c5aeed17d2afab1c653e1 65a20ee6c73656fb2fc83c5b7290b5e231974a3b 66ae8c601390aef7549e0755bcb6980b3559d00d 67302ce3385a1a392dc199b64655415e59fa4967 687902c040abda16b725ba09892ed50932406796 688ebbd2160c2742a976802625794049e953d762 6cf1eafae2940d3c3fa3172cc90ac33536f04a81 6d420e47568c66fd0f670bdb6aeb6ac5874337dd 6dc58b072af046671737545bd47d53fe799e64a0 711f99513084675c35c8f7772594503408ae1527 71e8e87333495f6e91f7015927d68fe0b068609b 7528f5d466891e17cc1ebb6aa99127ff4f86613c 7b006a99bde82dbebe38e82b0a661217654bdc2b 7cda446e5c8b1b1eb87e39faf3549ab35eb5c919 84f498ed7ee1ea0ecca240613b5b9e47e48f2f93 86e2a96951753623383141c3427aee07c8b0059d 8974706935dd53f0a260904cfba4c969bd29e7ee 8f735f1ac6f916b6cf947ba70e4c44bff6a927c7 8fdfe97c2b4c60fc2e7da0884288e49096b5d98e 9001360fba012c654c8badb98ca8b6c6f597cc72 915772f502aa3d2c5deb5cf6e842ddc8f54c9c5e 91f99101ee60119fcbfc7dc4417d313fe39a04d8 96a2cb4e5df573d6b0ee3d9620ef115ded3199ee 96a9c07df1b8b7a691ae48bc41d40d4ceceea32f 96e8c1e38d66f82cef936a7eee794eb76f52fd9e 98aef08e20180b570361a3c2123f863ca78bb1cd a2e73bb5bce93358ac4bf3d026d6f9b48f657f5f abccaee3f8e297052d9cf7b575b4e2ad73ecd4ff ac10d7573d8c9f8ad8878049044728173211cdfe af2609b48eb1e611a5020999575f40b8f7a1aaf7 b010f4b741528eb698e56089407528250315a418 b1c1706dfa4cf6e58b8bf97bdb6db373e21fdbd8 b20cc75e350155d63cd720175c1d06ef347fe926 b493b4a7c88d9fbc71856d7be11d8d74eb9375da b83419ecc2394759a92e47474d9359fc90799a5d b953859cf1bacef8aa2196fcbb7a08c01a920633 bfec124afbc203ce13a229d8ac7f23def4bd7662 c1a581ff3fb81a1bca171590589443d76bb4a38e c75324c6956585fb7d35a9ec432693578bec8b4c ca3d65edf40ab64d7ebf909a7195076ede4c064a cd2710fec0b8e32154c1cfca38999c625f2a3d91 d01f0e94c3dd89599241e7c089d9637261909f4e d180743597ce4466b116f73890e40485b2beacca d51f3aa6a8e8b4e158069fd0410b7f19fad4705b d68889ed3d4bb26b80e1a77784adb0d6252019c1 d6d9fde4c2e3f56a8400db733be05a178c408c25 de28af42347cd9bf2e70e95b97f4f3624eef7c28 e1407473c01bf494206ee13557dabd88b30f9d3e e88ab8e0c81b214abd95e5801fd44dd706885978 ec20df0559f4faf8a0dcccaad2043a6a092a2a8a ecf53673dd0e1a65a4df6c55969a55474f65568b efa1e16ba26544071b78765b49a28ad0f725952d f24c9a9014067b198d7c592ffce810e3ca698e25 f686ab3002fb6c91eaf5ff62726e25db8fa4cc7d fd0ce5d35de431e5bed8b24fa739efb50c2737ff fd91a23f761bf6edd35944fc3229b16379ca89ef fee6b2c516c6b226175e0196ce560d0ea806b539 ffed830ba1e28412fd2c1c2ad8365cd3a23ec4e0
drwxr-xr-x root/root 0 2018-02-10 17:35 ./
drwxr-xr-x root/root 0 2018-02-10 17:35 ./usr/
drwxr-xr-x root/root 0 2018-02-10 17:35 ./usr/lib/
drwxr-xr-x root/root 0 2018-02-10 17:35 ./usr/lib/debug/
drwxr-xr-x root/root 0 2018-02-10 17:35 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2018-02-10 17:35 ./usr/lib/debug/.build-id/00/
-rw-r--r-- root/root 274524 2018-02-10 17:35 ./usr/lib/debug/.build-id/00/5d0a2dd87e57fdcd8acce8296c99407c564328.debug
drwxr-xr-x root/root 0 2018-02-10 17:35 ./usr/lib/debug/.build-id/03/
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drwxr-xr-x root/root 0 2018-02-10 17:35 ./usr/lib/debug/.build-id/0f/
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drwxr-xr-x root/root 0 2018-02-10 17:35 ./usr/lib/debug/.build-id/12/
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-rw-r--r-- root/root 220848 2018-02-10 17:35 ./usr/lib/debug/.build-id/12/f029fcfa1593019f282a66aa0696ff0f64b968.debug
drwxr-xr-x root/root 0 2018-02-10 17:35 ./usr/lib/debug/.build-id/16/
-rw-r--r-- root/root 170800 2018-02-10 17:35 ./usr/lib/debug/.build-id/16/4a8b199d5ce8f03fe5bbf2faa3d439b508f9cb.debug
drwxr-xr-x root/root 0 2018-02-10 17:35 ./usr/lib/debug/.build-id/26/
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ncbi-blast+_2.7.1-1+b1_armhf.deb
--------------------------------
new Debian package, version 2.0.
size 8043024 bytes: control archive=3608 bytes.
1312 bytes, 25 lines control
6692 bytes, 101 lines md5sums
Package: ncbi-blast+
Source: ncbi-blast+ (2.7.1-1)
Version: 2.7.1-1+b1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 33943
Depends: ncbi-data, python, perl:any, libbz2-1.0, libc6 (>= 2.15), libgcc1 (>= 1:3.5), libgnutls30 (>= 3.5.6), libgomp1 (>= 4.9), libmbedcrypto1 (>= 2.7), libmbedtls10 (>= 2.1), libpcre3, libstdc++6 (>= 5.2), zlib1g (>= 1:1.2.0)
Enhances: t-coffee
Section: science
Priority: optional
Multi-Arch: foreign
Homepage: http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/
Description: next generation suite of BLAST sequence search tools
The Basic Local Alignment Search Tool (BLAST) is the most widely
used sequence similarity tool. There are versions of BLAST that
compare protein queries to protein databases, nucleotide queries
to nucleotide databases, as well as versions that translate nucleotide
queries or databases in all six frames and compare to protein databases
or queries.
PSI-BLAST produces a position-specific-scoring-matrix (PSSM) starting
with a protein query, and then uses that PSSM to perform further searches.
It is also possible to compare a protein or nucleotide query to a
database of PSSM’s.
The NCBI supports a BLAST web page at blast.ncbi.nlm.nih.gov as well as
a network service.
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| Summary |
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Build Architecture: armhf
Build-Space: 2928184
Build-Time: 4213
Distribution: buster-staging
Host Architecture: armhf
Install-Time: 274
Job: ncbi-blast+_2.7.1-1
Machine Architecture: armhf
Package: ncbi-blast+
Package-Time: 4509
Source-Version: 2.7.1-1
Space: 2928184
Status: successful
Version: 2.7.1-1+b1
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Finished at 2018-02-22T06:33:42Z
Build needed 01:15:09, 2928184k disk space